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Gzipped fastq files #186

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keenhl opened this issue Mar 21, 2022 · 1 comment

keenhl commented Mar 21, 2022

Can Jellyfish read gzipped fastq files and, if not, can uncompressed fastq be piped into Jellyfish.

Thanks,

gregorysprenger commented Jul 21, 2023

You need to use zcat to read gzipped fastq files to be used with jellyfish. It is explained in the documentation.

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