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+ -org.gbif.api.vocabulary.collections (GBIF Common :: API 1.14.0 API) - +org.gbif.api.vocabulary.collections (GBIF Common :: API 1.14.1 API) + @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ diff --git a/apidocs/org/gbif/api/vocabulary/package-summary.html b/apidocs/org/gbif/api/vocabulary/package-summary.html index a9c7ddecd2..8e07da1cc4 100644 --- a/apidocs/org/gbif/api/vocabulary/package-summary.html +++ b/apidocs/org/gbif/api/vocabulary/package-summary.html @@ -2,10 +2,10 @@ - + -org.gbif.api.vocabulary (GBIF Common :: API 1.14.0 API) - +org.gbif.api.vocabulary (GBIF Common :: API 1.14.1 API) + @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ @@ -13,7 +13,7 @@ diff --git a/apidocs/org/gbif/api/ws/mixin/package-summary.html b/apidocs/org/gbif/api/ws/mixin/package-summary.html index d3a8f16410..7663de3dcd 100644 --- a/apidocs/org/gbif/api/ws/mixin/package-summary.html +++ b/apidocs/org/gbif/api/ws/mixin/package-summary.html @@ -2,10 +2,10 @@ - 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GBIF Common :: API

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethodsMissedClasses
Total55,877 of 89,82837%5,718 of 7,57124%6,7918,5308,61513,4983,4214,725225413
org.gbif.api.model.registry8,1681,27413%858566%9111,0781,2631,591465621920
org.gbif.api.model.collections7,1090%1,1820%9609608018013693691515
org.gbif.api.model.checklistbank5,0983,36939%43841648%6889938961,575355566416
org.gbif.api.model.occurrence4,0334,04350%76842435%7801,036480884213440515
org.gbif.api.model.event3,6190%5940%46446417417416716744
org.gbif.api.vocabulary.collections2,5170%n/a1515247247151599
org.gbif.api.model.checklistbank.search2,3181475%1600%25525841643317517856
org.gbif.api.model.pipelines2,1621,07333%1705424%215280344553116168816
org.gbif.api.model.registry.search1,5150%780%1761762752751371371212
org.gbif.api.vocabulary1,41514,63491%5518577%983071951,590561872064
org.gbif.api.model.registry.eml1,3103%994%149151264279979967
org.gbif.api.util1,2652,52166%24030555%22346025080951169321
org.gbif.api.model.collections.lookup1,2350%980%13613623423487871010
org.gbif.api.model.common1,0771,17752%958547%13025017442549160415
org.gbif.api.model.common.search99918015%502028%121132202248869748
org.gbif.api.model.crawler9971,40558%1239944%1202401334203112908
org.gbif.api.util.iterables9740%680%10610619419472722121
org.gbif.api.model.metrics.cube94014913%50%19324477142724
org.gbif.api.model.collections.request7940%0%13213228028013013055
org.gbif.api.model.common.messaging7500%0%6262158158595988
org.gbif.api.model.collections.suggestions7080%760%109109149149717177
org.gbif.api.model.literature.search5980%n/a7979157157797933
org.gbif.api.model.registry.eml.curatorial5494%500%6667113115414245
org.gbif.api.model.predicate51971557%646851%74141942563275118
org.gbif.api.model.collections.duplicates5140%480%8080116116565633
org.gbif.api.model.literature4820%n/a3350503333
org.gbif.api.v24670%580%7777104104484844
org.gbif.api.jackson40658659%524244%6110911022727611630
org.gbif.api.model.registry.eml.temporal3696%340%41487080243115
org.gbif.api.model.registry.eml.geospatial3560%200%46468282363644
org.gbif.api.model.occurrence.search3051,31381%n/a5861113236586134
org.gbif.api.model.common.paging30416034%202050%385365104213314
org.gbif.api.model.collections.search2780%340%49496464323222
org.gbif.api.model.pipelines.ws2430%240%44446565323233
org.gbif.api.model.registry.view2270%380%333377141411
org.gbif.api.model.registry.metasync2110%140%20203434131322
org.gbif.api.util.validators.identifierschemes18043070%334356%337739128939110
org.gbif.api.model.collections.view1620%220%29292020181822
org.gbif.api.model.occurrence.geo15840271%181240%22402476102503
org.gbif.api.model.registry.search.collections1440%120%17172525111111
org.gbif.api.model.metrics51%50%1531165572302
org.gbif.api.model20%n/a11122331111212
org.gbif.api.ws.mixin0%n/a4414144411
org.gbif.api.exception0%n/a8817178833
org.gbif.api.model.common.export0%n/a33773311
org.gbif.api.model.collections.merge0%n/a8811118822
org.gbif.api.documentation0%n/a11111111
org.gbif.api.util.validators.email92%50%26180401
org.gbif.api.util.comparators100%100%070120502
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file +GBIF Common :: API

GBIF Common :: API

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethodsMissedClasses
Total55,883 of 89,92037%5,719 of 7,58124%6,7928,5368,61613,5143,4214,726225413
org.gbif.api.model.registry8,1681,27413%858566%9111,0781,2631,591465621920
org.gbif.api.model.collections7,1090%1,1820%9609608018013693691515
org.gbif.api.model.checklistbank5,0983,36939%43841648%6889938961,575355566416
org.gbif.api.model.occurrence4,0334,04350%76842435%7801,036480884213440515
org.gbif.api.model.event3,6190%5940%46446417417416716744
org.gbif.api.vocabulary.collections2,5170%n/a1515247247151599
org.gbif.api.model.checklistbank.search2,3181475%1600%25525841643317517856
org.gbif.api.model.pipelines2,1621,07333%1705424%215280344553116168816
org.gbif.api.model.registry.search1,5150%780%1761762752751371371212
org.gbif.api.vocabulary1,41514,63491%5518577%983071951,590561872064
org.gbif.api.model.registry.eml1,3103%994%149151264279979967
org.gbif.api.util1,2662,61267%24031556%22346625082551170321
org.gbif.api.model.collections.lookup1,2350%980%13613623423487871010
org.gbif.api.model.common1,0771,17752%958547%13025017442549160415
org.gbif.api.model.common.search99918015%502028%121132202248869748
org.gbif.api.model.crawler9971,40558%1239944%1202401334203112908
org.gbif.api.util.iterables9740%680%10610619419472722121
org.gbif.api.model.metrics.cube94014913%50%19324477142724
org.gbif.api.model.collections.request7940%0%13213228028013013055
org.gbif.api.model.common.messaging7500%0%6262158158595988
org.gbif.api.model.collections.suggestions7080%760%109109149149717177
org.gbif.api.model.literature.search5980%n/a7979157157797933
org.gbif.api.model.registry.eml.curatorial5494%500%6667113115414245
org.gbif.api.model.predicate52471057%656750%75141952563275118
org.gbif.api.model.collections.duplicates5140%480%8080116116565633
org.gbif.api.model.literature4820%n/a3350503333
org.gbif.api.v24670%580%7777104104484844
org.gbif.api.jackson40658659%524244%6110911022727611630
org.gbif.api.model.registry.eml.temporal3696%340%41487080243115
org.gbif.api.model.registry.eml.geospatial3560%200%46468282363644
org.gbif.api.model.occurrence.search3051,31381%n/a5861113236586134
org.gbif.api.model.common.paging30416034%202050%385365104213314
org.gbif.api.model.collections.search2780%340%49496464323222
org.gbif.api.model.pipelines.ws2430%240%44446565323233
org.gbif.api.model.registry.view2270%380%333377141411
org.gbif.api.model.registry.metasync2110%140%20203434131322
org.gbif.api.util.validators.identifierschemes18043070%334356%337739128939110
org.gbif.api.model.collections.view1620%220%29292020181822
org.gbif.api.model.occurrence.geo15840271%181240%22402476102503
org.gbif.api.model.registry.search.collections1440%120%17172525111111
org.gbif.api.model.metrics51%50%1531165572302
org.gbif.api.model20%n/a11122331111212
org.gbif.api.ws.mixin0%n/a4414144411
org.gbif.api.exception0%n/a8817178833
org.gbif.api.model.common.export0%n/a33773311
org.gbif.api.model.collections.merge0%n/a8811118822
org.gbif.api.documentation0%n/a11111111
org.gbif.api.util.validators.email92%50%26180401
org.gbif.api.util.comparators100%100%070120502
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file diff --git a/jacoco/jacoco-sessions.html b/jacoco/jacoco-sessions.html index 5eab2a9e17..b41a4eaa4b 100644 --- a/jacoco/jacoco-sessions.html +++ b/jacoco/jacoco-sessions.html @@ -1 +1 @@ -Sessions

Sessions

This coverage report is based on execution data from the following sessions:

SessionStart TimeDump Time
jenkins-vh.gbif.org-d44914c328-Feb-2024 17:20:1728-Feb-2024 17:20:25

Execution data for the following classes is considered in this report:

ClassId
ch.qos.logback.classic.BasicConfigurator0047a66eeae0d6b2
ch.qos.logback.classic.Levele2155b45608f35d7
ch.qos.logback.classic.Loggerf35d4d4ad6b0173a
ch.qos.logback.classic.LoggerContextd057ce3cea631d6b
ch.qos.logback.classic.layout.TTLLLayout17db39eb61acaa64
ch.qos.logback.classic.pattern.ClassicConverter78403f02659989af
ch.qos.logback.classic.pattern.ThrowableHandlingConverter266cc4ca75fcd39d
ch.qos.logback.classic.pattern.ThrowableProxyConverter46dc88ad0c97e462
ch.qos.logback.classic.selector.DefaultContextSelectorfd861e3242ccff2f
ch.qos.logback.classic.spi.EventArgUtil88f3990bf293da69
ch.qos.logback.classic.spi.LoggerContextVOecac106025bca4a3
ch.qos.logback.classic.spi.LoggingEvent75c5fe4974050a6f
ch.qos.logback.classic.spi.TurboFilterListaa3cf39d0c0c651e
ch.qos.logback.classic.util.ContextInitializerf560906e9553d69f
ch.qos.logback.classic.util.ContextSelectorStaticBinder271bbf6fa66123b1
ch.qos.logback.classic.util.EnvUtil39b5543082458460
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org.gbif.api.vocabulary.Country.IsoDeserializerdbe09ca7f2d4aeb5
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org.gbif.api.vocabulary.Country.TitleDeserializer89679565f85a7f52
org.gbif.api.vocabulary.Country.TitleSerializer1bd5d8d1bdcc6d43
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org.gbif.api.vocabulary.CountryTest.Container3b27895d688f806d
org.gbif.api.vocabulary.CountryTest.CountryNameBean1c236a3c2317c06b
org.gbif.api.vocabulary.DatasetSubtype2995460c7f1e4244
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org.gbif.api.vocabulary.EndpointType96a63398ecaa3b54
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org.gbif.api.vocabulary.GbifRegiondcc89f0fb2d3ce3c
org.gbif.api.vocabulary.IdentifierType6ab40a07561102f6
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org.gbif.api.vocabulary.InterpretationRemarkTest5199f0fb3f00eaf3
org.gbif.api.vocabulary.Kingdom214fec9aa8ce6654
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org.gbif.api.vocabulary.Language8e9ddb8bde074f8c
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org.gbif.api.vocabulary.Language.LenientDeserializer7908d33ea928115f
org.gbif.api.vocabulary.LanguageTest7fa153c4b9f5fe32
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org.gbif.api.vocabulary.Licenseb3445705447c4c4c
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org.gbif.api.vocabulary.MaintenanceUpdateFrequencyb8fd14c2d78171d2
org.gbif.api.vocabulary.MaintenanceUpdateFrequencyTestd59c57626980af51
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org.gbif.api.vocabulary.NamePart335463bfa8a5a472
org.gbif.api.vocabulary.NameTypeb0857cf1481462d5
org.gbif.api.vocabulary.NameTypeTestcbc461742062fb17
org.gbif.api.vocabulary.NameUsageIssuecce44b3a2c16a597
org.gbif.api.vocabulary.NodeType4e8569da21401de3
org.gbif.api.vocabulary.NomenclaturalCodebaefcacc2106ab73
org.gbif.api.vocabulary.NomenclaturalStatus6b9d3f77cf51a39f
org.gbif.api.vocabulary.NomenclaturalStatusTest5c11582cc335f390
org.gbif.api.vocabulary.OccurrenceIssuecdf9ced3d581b252
org.gbif.api.vocabulary.OccurrenceIssue.TermsGroupc15bf65c5e16142b
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org.gbif.api.vocabulary.Origin6b276d81f15a309f
org.gbif.api.vocabulary.ParticipationStatus8ec4cdcc29aa9507
org.gbif.api.vocabulary.PreservationMethodType101af9a6a3e063dd
org.gbif.api.vocabulary.ProcessingErrorType77f896d9d3bc4434
org.gbif.api.vocabulary.Rank9b97cb83cd4cb2f2
org.gbif.api.vocabulary.RankTest12f21b430d55f90c
org.gbif.api.vocabulary.RolesTestd55219e3faa26d58
org.gbif.api.vocabulary.Sexbd158a446d435237
org.gbif.api.vocabulary.TaxonomicStatuse2d2ccf6b8131bfc
org.gbif.api.vocabulary.TaxonomicStatusTestfff17a77957ee60e
org.gbif.api.vocabulary.TechnicalInstallationTypec3a1895aab0753c5
org.gbif.api.vocabulary.ThreatStatus87d12130a8d4eb70
org.gbif.api.vocabulary.TypeStatusc9e87decd8a3dad2
org.gbif.api.vocabulary.TypeStatusTest68d6c9f789167b05
org.gbif.api.vocabulary.UserRolee957d45b323d32c0
org.gbif.dwc.terms.AcTerm44e9d0a9b2638dc1
org.gbif.dwc.terms.AcefTerm2853a3ce2c87f4e3
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org.gbif.dwc.terms.DwcaTerm31ef494bcd29b4f9
org.gbif.dwc.terms.GadmTerm008686e573c2e1f0
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org.gbif.dwc.terms.IucnTermd8fca3a07523974a
org.gbif.dwc.terms.PlaziTerm4100932110717a51
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org.locationtech.jts.index.chain.MonotoneChain80b5eea07061ce46
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org.locationtech.jts.noding.NodingIntersectionFinderc621a6082d716124
org.locationtech.jts.noding.OrientedCoordinateArrayb69ce54a894f3529
org.locationtech.jts.noding.SinglePassNoder1045f6555c337900
org.locationtech.jts.operation.GeometryGraphOperation5325a78c452743be
org.locationtech.jts.operation.overlay.LineBuilderd5640d100af07a19
org.locationtech.jts.operation.overlay.MaximalEdgeRing755548cc74d221a9
org.locationtech.jts.operation.overlay.MinimalEdgeRing96e0f524b62423ec
org.locationtech.jts.operation.overlay.OverlayNodeFactory29962d1f27c2405c
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org.locationtech.jts.operation.valid.ConnectedInteriorTesterda81d9d33f018a29
org.locationtech.jts.operation.valid.ConsistentAreaTesterde06d96988de6434
org.locationtech.jts.operation.valid.IndexedNestedRingTesterb85640de652d57ad
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org.locationtech.spatial4j.distance.DistanceUtils3947d42758a633a3
org.locationtech.spatial4j.distance.GeodesicSphereDistCalcb7fabe002eeb1e9b
org.locationtech.spatial4j.distance.GeodesicSphereDistCalc.Haversineb31b41ee916ad10d
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org.locationtech.spatial4j.io.LegacyShapeReader008ff22c95a76b88
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org.locationtech.spatial4j.io.PolyshapeReaderab3e4ba1a188436a
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org.locationtech.spatial4j.io.WKTReader3cee1a883bad1031
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org.locationtech.spatial4j.shape.jts.JtsPoint540783ac672ba8c3
org.locationtech.spatial4j.shape.jts.JtsShapeFactory17f3828fbd31a136
org.locationtech.spatial4j.shape.jts.JtsShapeFactory.CoordinatesAccumulatorcd0ccce097d283a9
org.locationtech.spatial4j.shape.jts.JtsShapeFactory.JtsLineStringBuilder8b0f8198e1dbe760
org.locationtech.spatial4j.shape.jts.JtsShapeFactory.JtsMultiPolygonBuilderd3dcce921d0466ab
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org.locationtech.spatial4j.shape.jts.JtsShapeFactory.JtsPolygonBuilder.JtsHoleBuilderf65b2017adb8aef8
org.mockito.Answers7bb49d321e73bbc5
org.mockito.Mockitoc5c93521421697f0
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org.mockito.internal.MockitoCore8c1dee29fb0da68b
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org.mockito.internal.configuration.ClassPathLoader1837784d8946effa
org.mockito.internal.configuration.DefaultDoNotMockEnforcerc193dbfbfd7e7112
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org.mockito.internal.invocation.MatchersBinderb39b9426c9814ac7
org.mockito.internal.progress.ArgumentMatcherStorageImpl83a3e5fcf460cd8d
org.mockito.internal.progress.MockingProgressImpl92818897164b80b6
org.mockito.internal.progress.MockingProgressImpl.1a1ad00aef40918d3
org.mockito.internal.progress.ThreadSafeMockingProgress5ef9d6f1a875dc18
org.mockito.internal.progress.ThreadSafeMockingProgress.11c85bd989b9441aa
org.mockito.internal.stubbing.DoAnswerStyleStubbingf2057cd0aee1a50b
org.mockito.internal.stubbing.InvocationContainerImpl70d6f02b67d57b4f
org.mockito.internal.stubbing.answers.CallsRealMethods16da2f316c946fec
org.mockito.internal.stubbing.defaultanswers.GloballyConfiguredAnswerf308e3faf16f6212
org.mockito.internal.stubbing.defaultanswers.ReturnsDeepStubs7a1b5ff44181d6b8
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org.mockito.internal.stubbing.defaultanswers.ReturnsMocksf923109370288432
org.mockito.internal.stubbing.defaultanswers.ReturnsMoreEmptyValues4a4f9f45d874e56f
org.mockito.internal.stubbing.defaultanswers.ReturnsSmartNulls56e4359834584989
org.mockito.internal.stubbing.defaultanswers.TriesToReturnSelf2df789f77987f023
org.mockito.internal.util.ConsoleMockitoLoggerb50468c7ba4abdba
org.mockito.internal.util.MockCreationValidatorb073c74d6aea57f3
org.mockito.internal.util.MockNameImplc374206ea5426e18
org.mockito.internal.util.MockUtild287b066371cb395
org.mockito.internal.util.StringUtilfc180f2e2cfb19c5
org.mockito.internal.util.collections.Iterablesf2f271f84160edef
org.mockito.internal.util.reflection.ReflectionMemberAccessor5b659ecadce64e6d
org.mockito.internal.verification.DefaultRegisteredInvocations2c81cbe8de7c014f
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org.objenesis.ObjenesisBase0c1d2fd83029257f
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org.objenesis.instantiator.sun.SunReflectionFactoryHelperd17e7b3403696605
org.objenesis.instantiator.sun.SunReflectionFactoryInstantiator6156947e7d7c507c
org.objenesis.strategy.BaseInstantiatorStrategyb0aaa6460452f5ce
org.objenesis.strategy.PlatformDescriptionc6456f671febfd7c
org.objenesis.strategy.StdInstantiatorStrategyabae05ba56ea35a6
org.slf4j.LoggerFactorya381b7ddf19bf47d
org.slf4j.MDC4d31efbdc380017c
org.slf4j.helpers.FormattingTuple46e388b1eb4cb5c1
org.slf4j.helpers.MessageFormatter42e7db43bad15507
org.slf4j.helpers.NOPLoggerFactory54f5632bfcb8d8d5
org.slf4j.helpers.SubstituteLoggerFactorydc7efc0107a4a62d
org.slf4j.helpers.Util857ff3acc0576435
org.slf4j.impl.StaticLoggerBinder039b3c899e055991
org.slf4j.impl.StaticMDCBinder649700d80abb641d
sun.util.resources.ar.LocaleNames_ard9f4d0bb38e0c966
sun.util.resources.be.LocaleNames_be7639bba360ae3e8b
sun.util.resources.bg.LocaleNames_bge628abf4ecc2a23a
sun.util.resources.ca.LocaleNames_caddf5c489e92e9528
sun.util.resources.cs.LocaleNames_cs7bf9837ff26916f9
sun.util.resources.da.LocaleNames_dad880e486f17d0066
sun.util.resources.de.LocaleNames_de7b6c9bb5eabb5fed
sun.util.resources.el.LocaleNames_elf20f1a1fb9a0ac63
sun.util.resources.es.LocaleNames_es09827a8359cf3d8b
sun.util.resources.et.LocaleNames_et444e74741bcf48fe
sun.util.resources.fi.LocaleNames_fi3b1dc42651d3dbc8
sun.util.resources.fr.LocaleNames_fr741131f365117a58
sun.util.resources.ga.LocaleNames_gaa17c01fc21ff31e8
sun.util.resources.hi.LocaleNames_hidcdd5f6823c8d10f
sun.util.resources.hr.LocaleNames_hrf6d23eaf1152ee94
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sun.util.resources.in.LocaleNames_in5e7c7f635fc8108f
sun.util.resources.is.LocaleNames_isdab05ae52eaa8e04
sun.util.resources.it.LocaleNames_itebf8afd5a949c500
sun.util.resources.iw.LocaleNames_iw8544fee7bb519e2a
sun.util.resources.ja.LocaleNames_ja2134a4fd12af8f18
sun.util.resources.ko.LocaleNames_ko9c036b0627b0d26f
sun.util.resources.lt.LocaleNames_lt0a2e088fd1a2d75c
sun.util.resources.lv.LocaleNames_lv497b613eb3f22999
sun.util.resources.mk.LocaleNames_mkb2f9afcc072e10bd
sun.util.resources.ms.LocaleNames_msf54efc4586b00aa7
sun.util.resources.mt.LocaleNames_mt4ba7e5e33ea0e85e
sun.util.resources.nl.LocaleNames_nldc75f9fe43221b42
sun.util.resources.no.LocaleNames_no86ade73a26fd286c
sun.util.resources.no.LocaleNames_no_NO_NY37c04f93bfd35478
sun.util.resources.pl.LocaleNames_pl727d131505e87005
sun.util.resources.pt.LocaleNames_pt8d602d0c8f6bb1ff
sun.util.resources.ro.LocaleNames_ro0acd5c8b3297423c
sun.util.resources.ru.LocaleNames_rufc0c6600de0c5f7e
sun.util.resources.sk.LocaleNames_skd8ba8e0555d61d28
sun.util.resources.sl.LocaleNames_sl61e57f5f84b43121
sun.util.resources.sq.LocaleNames_sq5f66699988fc699b
sun.util.resources.sr.LocaleNames_srdd4c94e9b5cf1da3
sun.util.resources.sv.LocaleNames_sv4a9d321050c9e0a3
sun.util.resources.th.LocaleNames_th38d5c55be55ffd5f
sun.util.resources.tr.LocaleNames_tr562ecec7c95e956e
sun.util.resources.uk.LocaleNames_ukb5f2debcfe219b20
sun.util.resources.vi.LocaleNames_vi0c6312fe756378ee
sun.util.resources.zh.LocaleNames_zh9fe6ae43bb7e10ff
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file +Sessions

Sessions

This coverage report is based on execution data from the following sessions:

SessionStart TimeDump Time
jenkins-vh.gbif.org-7e9be8a529-Feb-2024 13:34:4429-Feb-2024 13:34:51

Execution data for the following classes is considered in this report:

ClassId
ch.qos.logback.classic.BasicConfigurator0047a66eeae0d6b2
ch.qos.logback.classic.Levele2155b45608f35d7
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sun.util.resources.ro.LocaleNames_ro0acd5c8b3297423c
sun.util.resources.ru.LocaleNames_rufc0c6600de0c5f7e
sun.util.resources.sk.LocaleNames_skd8ba8e0555d61d28
sun.util.resources.sl.LocaleNames_sl61e57f5f84b43121
sun.util.resources.sq.LocaleNames_sq5f66699988fc699b
sun.util.resources.sr.LocaleNames_srdd4c94e9b5cf1da3
sun.util.resources.sv.LocaleNames_sv4a9d321050c9e0a3
sun.util.resources.th.LocaleNames_th38d5c55be55ffd5f
sun.util.resources.tr.LocaleNames_tr562ecec7c95e956e
sun.util.resources.uk.LocaleNames_ukb5f2debcfe219b20
sun.util.resources.vi.LocaleNames_vi0c6312fe756378ee
sun.util.resources.zh.LocaleNames_zh9fe6ae43bb7e10ff
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file diff --git a/jacoco/jacoco.csv b/jacoco/jacoco.csv index 7807ca30f3..ebac0f5556 100644 --- a/jacoco/jacoco.csv +++ b/jacoco/jacoco.csv @@ -49,7 +49,7 @@ GBIF Common :: API,org.gbif.api.model.pipelines.ws,RunAllParams,27,0,0,0,9,0,5,0 GBIF Common :: API,org.gbif.api.model.pipelines.ws,SearchResult,190,0,24,0,44,0,33,0,21,0 GBIF Common :: API,org.gbif.api.model.pipelines.ws,PipelineProcessParameters,26,0,0,0,12,0,6,0,6,0 GBIF Common :: API,org.gbif.api.util.validators.email,EmailConstraintValidator,2,23,2,2,1,7,2,4,0,4 -GBIF Common :: API,org.gbif.api.util,SearchTypeValidator,166,560,23,83,24,137,22,52,3,18 +GBIF Common :: API,org.gbif.api.util,SearchTypeValidator,167,651,23,93,24,153,22,58,3,19 GBIF Common :: API,org.gbif.api.util,IsoDateInterval,31,271,5,43,6,53,8,30,3,11 GBIF Common :: API,org.gbif.api.util,IsoDateParsingUtils,75,193,12,26,14,35,11,15,0,7 GBIF Common :: API,org.gbif.api.util,LenientEqualsUtils,13,0,6,0,1,0,4,0,1,0 @@ -124,7 +124,7 @@ GBIF Common :: API,org.gbif.api.model.collections.view,CollectionView,30,0,0,0,1 GBIF Common :: API,org.gbif.api.model.predicate,InPredicate,55,107,4,14,7,21,6,10,2,5 GBIF Common :: API,org.gbif.api.model.predicate,GeoDistancePredicate,91,34,6,0,17,10,11,1,8,1 GBIF Common :: API,org.gbif.api.model.predicate,CompoundPredicate,23,61,6,2,6,10,4,5,1,4 -GBIF Common :: API,org.gbif.api.model.predicate,SimplePredicate,1,199,6,18,0,34,6,15,0,9 +GBIF Common :: API,org.gbif.api.model.predicate,SimplePredicate,6,194,7,17,1,33,7,14,0,9 GBIF Common :: API,org.gbif.api.model.predicate,EqualsPredicate,0,36,1,7,0,9,1,5,0,2 GBIF Common :: API,org.gbif.api.model.predicate,DisjunctionPredicate,0,23,0,4,0,8,0,4,0,2 GBIF Common :: API,org.gbif.api.model.predicate,ConjunctionPredicate,0,23,0,4,0,8,0,4,0,2 diff --git a/jacoco/jacoco.xml b/jacoco/jacoco.xml index e536d8acca..c56e8ef87a 100644 --- a/jacoco/jacoco.xml +++ b/jacoco/jacoco.xml @@ -1 +1 @@ - \ No newline at end of file + \ No newline at end of file diff --git a/jacoco/org.gbif.api.model.predicate/SimplePredicate.html b/jacoco/org.gbif.api.model.predicate/SimplePredicate.html index 630473b1ca..ea97a864d9 100644 --- a/jacoco/org.gbif.api.model.predicate/SimplePredicate.html +++ b/jacoco/org.gbif.api.model.predicate/SimplePredicate.html @@ -1 +1 @@ -SimplePredicate

SimplePredicate

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethods
Total1 of 20099%6 of 2475%62103409
equals(Object)13697%4866%470601
toString()51100%n/a010501
checkNonEqualsComparatorAllowed()38100%2466%240401
SimplePredicate(boolean, SearchParameter, String, Boolean)37100%4100%0301201
hashCode()14100%n/a010101
checkPredicateAllowed()10100%2100%020301
isMatchCase()7100%n/a010101
getKey()3100%n/a010101
getValue()3100%n/a010101
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file +SimplePredicate

SimplePredicate

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethods
Total6 of 20097%7 of 2470%72113409
checkPredicateAllowed()5550%1150%121301
equals(Object)13697%4866%470601
toString()51100%n/a010501
checkNonEqualsComparatorAllowed()38100%2466%240401
SimplePredicate(boolean, SearchParameter, String, Boolean)37100%4100%0301201
hashCode()14100%n/a010101
isMatchCase()7100%n/a010101
getKey()3100%n/a010101
getValue()3100%n/a010101
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file diff --git a/jacoco/org.gbif.api.model.predicate/SimplePredicate.java.html b/jacoco/org.gbif.api.model.predicate/SimplePredicate.java.html index 5e280eda34..eb40475553 100644 --- a/jacoco/org.gbif.api.model.predicate/SimplePredicate.java.html +++ b/jacoco/org.gbif.api.model.predicate/SimplePredicate.java.html @@ -95,8 +95,8 @@ * @throws IllegalArgumentException if the key SearchParameter is Geometry */ private void checkPredicateAllowed() { - if (OccurrenceSearchParameter.GEOMETRY == key) { - throw new IllegalArgumentException("Geometry parameter must use a Within predicate"); + if (OccurrenceSearchParameter.GEOMETRY == key) { + throw new IllegalArgumentException("Geometry parameter must use a Within predicate"); } } diff --git a/jacoco/org.gbif.api.model.predicate/index.html b/jacoco/org.gbif.api.model.predicate/index.html index 829ac57fa7..1bd6f8755d 100644 --- a/jacoco/org.gbif.api.model.predicate/index.html +++ b/jacoco/org.gbif.api.model.predicate/index.html @@ -1 +1 @@ -org.gbif.api.model.predicate

org.gbif.api.model.predicate

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethodsMissedClasses
Total519 of 1,23457%64 of 13251%74141942563275118
GeoDistancePredicate913427%60%111217278901
IsNotNullPredicate860%100%111119196611
IsNullPredicate691719%9110%91112194601
WithinPredicate632528%60%7911204601
InPredicate5510766%41477%6167282701
RangePredicate451727%n/a346123401
FullTextSearchPredicate423746%3770%6107153501
GreaterThanOrEqualsPredicate29719%80%56791201
CompoundPredicate236172%6225%496161501
LikePredicate121250%1150%12140101
NotPredicate26897%2466%281150501
SimplePredicate19999%61875%6210340901
GreaterThanPredicate3597%2675%26090201
EqualsPredicate36100%1787%16090201
DisjunctionPredicate23100%4100%04080201
ConjunctionPredicate23100%4100%04080201
LessThanPredicate7100%n/a01020101
LessThanOrEqualsPredicate7100%n/a01020101
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file +org.gbif.api.model.predicate

org.gbif.api.model.predicate

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethodsMissedClasses
Total524 of 1,23457%65 of 13250%75141952563275118
GeoDistancePredicate913427%60%111217278901
IsNotNullPredicate860%100%111119196611
IsNullPredicate691719%9110%91112194601
WithinPredicate632528%60%7911204601
InPredicate5510766%41477%6167282701
RangePredicate451727%n/a346123401
FullTextSearchPredicate423746%3770%6107153501
GreaterThanOrEqualsPredicate29719%80%56791201
CompoundPredicate236172%6225%496161501
LikePredicate121250%1150%12140101
SimplePredicate619497%71770%7211340901
NotPredicate26897%2466%281150501
GreaterThanPredicate3597%2675%26090201
EqualsPredicate36100%1787%16090201
DisjunctionPredicate23100%4100%04080201
ConjunctionPredicate23100%4100%04080201
LessThanPredicate7100%n/a01020101
LessThanOrEqualsPredicate7100%n/a01020101
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file diff --git a/jacoco/org.gbif.api.model.predicate/index.source.html b/jacoco/org.gbif.api.model.predicate/index.source.html index 5e6e10991b..0b400c5d37 100644 --- a/jacoco/org.gbif.api.model.predicate/index.source.html +++ b/jacoco/org.gbif.api.model.predicate/index.source.html @@ -1 +1 @@ -org.gbif.api.model.predicate

org.gbif.api.model.predicate

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethodsMissedClasses
Total519 of 1,23457%64 of 13251%74141942563275118
GeoDistancePredicate.java913427%60%111217278901
IsNotNullPredicate.java860%100%111119196611
IsNullPredicate.java691719%9110%91112194601
WithinPredicate.java632528%60%7911204601
InPredicate.java5510766%41477%6167282701
RangePredicate.java451727%n/a346123401
FullTextSearchPredicate.java423746%3770%6107153501
GreaterThanOrEqualsPredicate.java29719%80%56791201
CompoundPredicate.java236172%6225%496161501
LikePredicate.java121250%1150%12140101
NotPredicate.java26897%2466%281150501
SimplePredicate.java19999%61875%6210340901
GreaterThanPredicate.java3597%2675%26090201
EqualsPredicate.java36100%1787%16090201
DisjunctionPredicate.java23100%4100%04080201
ConjunctionPredicate.java23100%4100%04080201
LessThanPredicate.java7100%n/a01020101
LessThanOrEqualsPredicate.java7100%n/a01020101
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file +org.gbif.api.model.predicate

org.gbif.api.model.predicate

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethodsMissedClasses
Total524 of 1,23457%65 of 13250%75141952563275118
GeoDistancePredicate.java913427%60%111217278901
IsNotNullPredicate.java860%100%111119196611
IsNullPredicate.java691719%9110%91112194601
WithinPredicate.java632528%60%7911204601
InPredicate.java5510766%41477%6167282701
RangePredicate.java451727%n/a346123401
FullTextSearchPredicate.java423746%3770%6107153501
GreaterThanOrEqualsPredicate.java29719%80%56791201
CompoundPredicate.java236172%6225%496161501
LikePredicate.java121250%1150%12140101
SimplePredicate.java619497%71770%7211340901
NotPredicate.java26897%2466%281150501
GreaterThanPredicate.java3597%2675%26090201
EqualsPredicate.java36100%1787%16090201
DisjunctionPredicate.java23100%4100%04080201
ConjunctionPredicate.java23100%4100%04080201
LessThanPredicate.java7100%n/a01020101
LessThanOrEqualsPredicate.java7100%n/a01020101
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file diff --git a/jacoco/org.gbif.api.util/SearchTypeValidator.html b/jacoco/org.gbif.api.util/SearchTypeValidator.html index a4a18e46dd..1e5127e337 100644 --- a/jacoco/org.gbif.api.util/SearchTypeValidator.html +++ b/jacoco/org.gbif.api.util/SearchTypeValidator.html @@ -1 +1 @@ -SearchTypeValidator

SearchTypeValidator

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethods
Total166 of 72677%23 of 10678%227424161321
validateGeometry(String)549964%4866%4742401
validate(SearchParameter, String)4213075%43690%32164001
parseDistanceRange(String)320%40%335511
parseDistance(String)150%20%224411
validateDoubleInRange(String, Range, String)55491%1787%1511401
validateGeoDistance(String)52784%1375%131701
validateGeoDistance(String, String, String)51372%1150%121601
validateDouble(String)51270%1150%121701
parseDateRange(String)30%n/a111111
validateInteger(String)48100%2466%2401301
parseDecimalRange(String)32100%1375%130501
parseIntegerRange(String)32100%1375%130501
validateMonth(Collection)27100%1787%150501
static {...}25100%n/a010501
validateDate(String)11100%2100%020401
isNumericRange(String)10100%2100%020301
isDateRange(String)10100%2100%020301
parseDouble(String)10100%2100%020301
parseInteger(String)10100%2100%020301
validateLatitude(String)5100%n/a010201
validateLongitude(String)5100%n/a010201
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file +SearchTypeValidator

SearchTypeValidator

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethods
Total167 of 81879%23 of 11680%228024177322
validate(SearchParameter, String)4213075%43690%32164001
validateGeometry(String)4211873%31178%3832801
parseDistanceRange(String)320%40%335511
parseDistance(String)150%20%224411
validatePolygon(Polygon, String)137284%1787%1511201
validateDoubleInRange(String, Range, String)55491%1787%1511401
validateGeoDistance(String)52784%1375%131701
validateGeoDistance(String, String, String)51372%1150%121601
validateDouble(String)51270%1150%121701
parseDateRange(String)30%n/a111111
validateInteger(String)48100%2466%2401301
parseDecimalRange(String)32100%1375%130501
parseIntegerRange(String)32100%1375%130501
validateMonth(Collection)27100%1787%150501
static {...}25100%n/a010501
validateDate(String)11100%2100%020401
isNumericRange(String)10100%2100%020301
isDateRange(String)10100%2100%020301
parseDouble(String)10100%2100%020301
parseInteger(String)10100%2100%020301
validateLatitude(String)5100%n/a010201
validateLongitude(String)5100%n/a010201
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file diff --git a/jacoco/org.gbif.api.util/SearchTypeValidator.java.html b/jacoco/org.gbif.api.util/SearchTypeValidator.java.html index 2676a58611..1ee9cc3443 100644 --- a/jacoco/org.gbif.api.util/SearchTypeValidator.java.html +++ b/jacoco/org.gbif.api.util/SearchTypeValidator.java.html @@ -32,7 +32,9 @@ import java.util.regex.Pattern; import org.apache.commons.lang3.StringUtils; +import org.locationtech.jts.algorithm.Orientation; import org.locationtech.jts.geom.Geometry; +import org.locationtech.jts.geom.MultiPolygon; import org.locationtech.jts.geom.Polygon; import org.locationtech.jts.operation.valid.IsValidOp; import org.locationtech.spatial4j.context.jts.DatelineRule; @@ -50,14 +52,14 @@ */ public class SearchTypeValidator { - private static final Pattern BOOLEAN = Pattern.compile("^(true|false)$", Pattern.CASE_INSENSITIVE); + private static final Pattern BOOLEAN = Pattern.compile("^(true|false)$", Pattern.CASE_INSENSITIVE); // this regex matches a double with an optional dot separated fracture and negative signing private static final String DEC = "-?\\d+(?:\\.\\d+)?"; private static final String DECIMAL_OR_WILDCARD = "(" + DEC + "|\\*)"; - private static final Range<Double> LATITUDE_RNG = Range.closed(-90.0, 90.0); - private static final Range<Double> LONGITUDE_RNG = Range.closed(-180.0, 180.0); + private static final Range<Double> LATITUDE_RNG = Range.closed(-90.0, 90.0); + private static final Range<Double> LONGITUDE_RNG = Range.closed(-180.0, 180.0); private static final String LATITUDE_ERROR_MSG = "%s is not valid value, latitude must be between -90 and 90."; @@ -87,14 +89,14 @@ * group 1: lower bound * group 2: upper bound */ - private static final Pattern DECIMAL_RANGE_PATTERN = Pattern.compile( + private static final Pattern DECIMAL_RANGE_PATTERN = Pattern.compile( "^" + DECIMAL_OR_WILDCARD + "\\s*,\\s*" + DECIMAL_OR_WILDCARD + "$", Pattern.CASE_INSENSITIVE); public static final String SIMPLE_ISO_YEAR_MONTH_PATTERN = "\\d{4}(?:-\\d{1,2})?"; private static final String DATE_OR_WILDCARD = "(" + SIMPLE_ISO_DATE_STR_PATTERN + "|\\*)"; - private static final Pattern DATE_RANGE_PATTERN = Pattern.compile( + private static final Pattern DATE_RANGE_PATTERN = Pattern.compile( "^(" + DATE_OR_WILDCARD + "\\s*,\\s*" + DATE_OR_WILDCARD + "|" + SIMPLE_ISO_YEAR_MONTH_PATTERN + ")$", Pattern.CASE_INSENSITIVE); /** @@ -110,11 +112,11 @@ * @return true if the given value is a valid range */ public static boolean isNumericRange(String value) { - if (StringUtils.isNotEmpty(value)) { + if (StringUtils.isNotEmpty(value)) { // decimal range for ints or doubles, or date range - return DECIMAL_RANGE_PATTERN.matcher(value).find(); + return DECIMAL_RANGE_PATTERN.matcher(value).find(); } - return false; + return false; } /** @@ -123,11 +125,11 @@ * @return true if the given value is a valid date range */ public static boolean isDateRange(String value) { - if (StringUtils.isNotEmpty(value)) { + if (StringUtils.isNotEmpty(value)) { // date range - return DATE_RANGE_PATTERN.matcher(value).find(); + return DATE_RANGE_PATTERN.matcher(value).find(); } - return false; + return false; } /** @@ -138,7 +140,7 @@ * @throws IllegalArgumentException if value is invalid or null */ public static Range<LocalDate> parseDateRange(String value) { - return IsoDateParsingUtils.parseDateRange(value); + return IsoDateParsingUtils.parseDateRange(value); } /** @@ -148,13 +150,13 @@ * @throws IllegalArgumentException if value is invalid or null */ public static Range<Double> parseDecimalRange(String value) { - if (StringUtils.isNotEmpty(value)) { - Matcher m = DECIMAL_RANGE_PATTERN.matcher(value); - if (m.find()) { - return Range.closed(parseDouble(m.group(1)), parseDouble(m.group(2))); + if (StringUtils.isNotEmpty(value)) { + Matcher m = DECIMAL_RANGE_PATTERN.matcher(value); + if (m.find()) { + return Range.closed(parseDouble(m.group(1)), parseDouble(m.group(2))); } } - throw new IllegalArgumentException("Invalid decimal range: " + value); + throw new IllegalArgumentException("Invalid decimal range: " + value); } /** @@ -164,14 +166,14 @@ * @throws IllegalArgumentException if value is invalid or null */ public static Range<Integer> parseIntegerRange(String value) { - if (StringUtils.isNotEmpty(value)) { - Matcher m = DECIMAL_RANGE_PATTERN.matcher(value); - if (m.find()) { + if (StringUtils.isNotEmpty(value)) { + Matcher m = DECIMAL_RANGE_PATTERN.matcher(value); + if (m.find()) { - return Range.closed(parseInteger(m.group(1)), parseInteger(m.group(2))); + return Range.closed(parseInteger(m.group(1)), parseInteger(m.group(2))); } } - throw new IllegalArgumentException("Invalid integer range: " + value); + throw new IllegalArgumentException("Invalid integer range: " + value); } /** @@ -183,88 +185,88 @@ * @throws IllegalArgumentException if the value cannot be converted to the expected type */ public static void validate(SearchParameter param, String value) throws IllegalArgumentException { - final Class<?> pType = param.type(); + final Class<?> pType = param.type(); try { - if (OccurrenceSearchParameter.GEOMETRY == param) { - validateGeometry(value); + if (OccurrenceSearchParameter.GEOMETRY == param) { + validateGeometry(value); } - if (OccurrenceSearchParameter.GEO_DISTANCE == param) { - validateGeoDistance(value); + if (OccurrenceSearchParameter.GEO_DISTANCE == param) { + validateGeoDistance(value); } // All the parameters except by GEOMETRY accept the wild card value - if (!WILD_CARD.equalsIgnoreCase(StringUtils.trimToEmpty(value))) { - if (OccurrenceSearchParameter.DECIMAL_LATITUDE == param) { - validateLatitude(value); + if (!WILD_CARD.equalsIgnoreCase(StringUtils.trimToEmpty(value))) { + if (OccurrenceSearchParameter.DECIMAL_LATITUDE == param) { + validateLatitude(value); - } else if (OccurrenceSearchParameter.DECIMAL_LONGITUDE == param) { - validateLongitude(value); + } else if (OccurrenceSearchParameter.DECIMAL_LONGITUDE == param) { + validateLongitude(value); - } else if (UUID.class.isAssignableFrom(pType)) { + } else if (UUID.class.isAssignableFrom(pType)) { //noinspection ResultOfMethodCallIgnored - UUID.fromString(value); + UUID.fromString(value); - } else if (Double.class.isAssignableFrom(pType)) { - validateDouble(value); + } else if (Double.class.isAssignableFrom(pType)) { + validateDouble(value); - } else if (Integer.class.isAssignableFrom(pType)) { - Collection<Integer> intsFound = validateInteger(value); - if (OccurrenceSearchParameter.MONTH == param) { - validateMonth(intsFound); + } else if (Integer.class.isAssignableFrom(pType)) { + Collection<Integer> intsFound = validateInteger(value); + if (OccurrenceSearchParameter.MONTH == param) { + validateMonth(intsFound); } - } else if (Boolean.class.isAssignableFrom(pType)) { + } else if (Boolean.class.isAssignableFrom(pType)) { // we cannot use Boolean.parseBoolean as this accepted anything as false - if (!BOOLEAN.matcher(value).find()) { - throw new IllegalArgumentException("Value " + value + " is no valid boolean"); + if (!BOOLEAN.matcher(value).find()) { + throw new IllegalArgumentException("Value " + value + " is no valid boolean"); } - } else if (Country.class.isAssignableFrom(pType)) { + } else if (Country.class.isAssignableFrom(pType)) { // iso codes or enum name expected - if (Country.fromIsoCode(value) == null - && VocabularyUtils.lookupEnum(value, Country.class) == null) { - throw new NullPointerException(); + if (Country.fromIsoCode(value) == null + && VocabularyUtils.lookupEnum(value, Country.class) == null) { + throw new NullPointerException(); } - } else if (Language.class.isAssignableFrom(pType)) { + } else if (Language.class.isAssignableFrom(pType)) { // iso codes expected - Objects.requireNonNull(Language.fromIsoCode(value)); - } else if (Enum.class.isAssignableFrom(pType)) { + Objects.requireNonNull(Language.fromIsoCode(value)); + } else if (Enum.class.isAssignableFrom(pType)) { // enum value expected, cast to enum @SuppressWarnings("unchecked") - Class<? extends Enum<?>> eType = (Class<? extends Enum<?>>) pType; - Objects.requireNonNull(VocabularyUtils.lookupEnum(value, eType)); + Class<? extends Enum<?>> eType = (Class<? extends Enum<?>>) pType; + Objects.requireNonNull(VocabularyUtils.lookupEnum(value, eType)); - } else if (Date.class.isAssignableFrom(pType) || Temporal.class.isAssignableFrom(pType)) { + } else if (Date.class.isAssignableFrom(pType) || Temporal.class.isAssignableFrom(pType)) { // ISO date strings - validateDate(value); + validateDate(value); - } else if (IsoDateInterval.class.isAssignableFrom(pType)) { + } else if (IsoDateInterval.class.isAssignableFrom(pType)) { // ISO date strings - validateDate(value); + validateDate(value); - } else if (!String.class.isAssignableFrom(pType)) { + } else if (!String.class.isAssignableFrom(pType)) { // any string allowed // an unexpected data type - update this method!! - throw new IllegalArgumentException("Unknown SearchParameter data type " + pType.getCanonicalName()); + throw new IllegalArgumentException("Unknown SearchParameter data type " + pType.getCanonicalName()); } } - } catch (NullPointerException e) { + } catch (NullPointerException e) { // Objects.requireNonNull throws NPE but we want IllegalArgumentException - throw new IllegalArgumentException("Value " + value + " invalid for filter parameter " + param, e); - } - } + throw new IllegalArgumentException("Value " + value + " invalid for filter parameter " + param, e); + } + } /** * @return the parsed double or null for wildcards * @throws NumberFormatException if invalid double */ private static Double parseDouble(String d) { - if (QUERY_WILDCARD.equals(d)) { - return null; + if (QUERY_WILDCARD.equals(d)) { + return null; } - return Double.parseDouble(d); + return Double.parseDouble(d); } /** @@ -272,61 +274,61 @@ * @throws NumberFormatException if invalid integer */ private static Integer parseInteger(String d) { - if (QUERY_WILDCARD.equals(d)) { - return null; + if (QUERY_WILDCARD.equals(d)) { + return null; } - return Integer.parseInt(d); + return Integer.parseInt(d); } /** * Validates if the string value is a valid ISO 8601 format. */ private static void validateDate(String value) { - if (isDateRange(value)) { - IsoDateParsingUtils.parseDateRange(value); + if (isDateRange(value)) { + IsoDateParsingUtils.parseDateRange(value); } else { - IsoDateParsingUtils.parseDate(value); + IsoDateParsingUtils.parseDate(value); } - } + } /** * Validates if the value is a valid single double or a range of double values. * If the value is a range each limit is validated and the wildcard character '*' is skipped. */ private static void validateDouble(String value) { - if (StringUtils.isEmpty(value)) { - throw new IllegalArgumentException("Double cannot be null or empty"); + if (StringUtils.isEmpty(value)) { + throw new IllegalArgumentException("Double cannot be null or empty"); } try { - Double.parseDouble(value); - } catch (NumberFormatException e) { - parseDecimalRange(value); - } - } + Double.parseDouble(value); + } catch (NumberFormatException e) { + parseDecimalRange(value); + } + } /** * Validates if the value is a valid single double and its value is between a range. */ private static void validateDoubleInRange(String value, Range<Double> range, String errorMsg) { - if (StringUtils.isEmpty(value)) { - throw new IllegalArgumentException("Double cannot be null or empty"); + if (StringUtils.isEmpty(value)) { + throw new IllegalArgumentException("Double cannot be null or empty"); } try { - final Double doubleValue = Double.parseDouble(value); - if (!range.contains(doubleValue)) { - throw new IllegalArgumentException(String.format(errorMsg, value)); + final Double doubleValue = Double.parseDouble(value); + if (!range.contains(doubleValue)) { + throw new IllegalArgumentException(String.format(errorMsg, value)); } - } catch (NumberFormatException e) { - if (isNumericRange(value)) { - Range<Double> rangeValue = parseDecimalRange(value); - if (!range.encloses(rangeValue)) { - throw new IllegalArgumentException(String.format(errorMsg, value)); + } catch (NumberFormatException e) { + if (isNumericRange(value)) { + Range<Double> rangeValue = parseDecimalRange(value); + if (!range.encloses(rangeValue)) { + throw new IllegalArgumentException(String.format(errorMsg, value)); } - } else { - throw new IllegalArgumentException("Argument is not a valid number"); + } else { + throw new IllegalArgumentException("Argument is not a valid number"); } - } - } + } + } /** * Verify that we have indeed a wellKnownText parameter. @@ -334,55 +336,90 @@ * The validation implemented does both syntactic and topological validation (for polygons only). */ private static void validateGeometry(String wellKnownText) { - JtsSpatialContextFactory spatialContextFactory = new JtsSpatialContextFactory(); - spatialContextFactory.normWrapLongitude = true; - spatialContextFactory.srid = 4326; - spatialContextFactory.datelineRule = DatelineRule.ccwRect; + JtsSpatialContextFactory spatialContextFactory = new JtsSpatialContextFactory(); + spatialContextFactory.normWrapLongitude = true; + spatialContextFactory.srid = 4326; + spatialContextFactory.datelineRule = DatelineRule.ccwRect; - WKTReader reader = new WKTReader(spatialContextFactory.newSpatialContext(), spatialContextFactory); + WKTReader reader = new WKTReader(spatialContextFactory.newSpatialContext(), spatialContextFactory); try { // This validates some errors, such as a latitude > 90° - Shape shape = reader.parse(wellKnownText); + Shape shape = reader.parse(wellKnownText); - if (shape instanceof JtsGeometry) { - Geometry geometry = ((JtsGeometry) shape).getGeom(); + if (shape instanceof JtsGeometry) { + Geometry geometry = ((JtsGeometry) shape).getGeom(); - IsValidOp validator = new IsValidOp(geometry); + IsValidOp validator = new IsValidOp(geometry); - if (!validator.isValid()) { - throw new IllegalArgumentException("Invalid geometry: " + validator.getValidationError()); + if (!validator.isValid()) { + throw new IllegalArgumentException("Invalid geometry: " + validator.getValidationError()); } - if (geometry.isEmpty()) { - throw new IllegalArgumentException("Empty geometry: " + wellKnownText); + if (geometry.isEmpty()) { + throw new IllegalArgumentException("Empty geometry: " + wellKnownText); } - // Calculating the area > 0 ensures that polygons that are representing lines or points are invalidated - if (geometry instanceof Polygon && geometry.getArea() == 0.0) { - throw new IllegalArgumentException("Polygon with zero area: " + wellKnownText); + // Validate a polygon — check the winding order + if (geometry instanceof Polygon) { + validatePolygon((Polygon) geometry, wellKnownText); } - switch (geometry.getGeometryType().toUpperCase()) { + // Validate polygons within a multipolygon + if (geometry instanceof MultiPolygon) { + MultiPolygon multiPolygon = (MultiPolygon) geometry; + for (int p = 0; p < multiPolygon.getNumGeometries(); p++) { + validatePolygon((Polygon) multiPolygon.getGeometryN(p), wellKnownText); + } + } + + switch (geometry.getGeometryType().toUpperCase()) { case "POINT": case "LINESTRING": case "POLYGON": case "MULTIPOLYGON": - return; + return; case "MULTIPOINT": case "MULTILINESTRING": case "GEOMETRYCOLLECTION": default: - throw new IllegalArgumentException("Unsupported simple WKT (unsupported type " + geometry.getGeometryType() + "): " + wellKnownText); + throw new IllegalArgumentException("Unsupported simple WKT (unsupported type " + geometry.getGeometryType() + "): " + wellKnownText); } } - } catch (AssertionError | ParseException e) { - throw new IllegalArgumentException("Cannot parse simple WKT: " + wellKnownText + " " + e.getMessage()); - } catch (InvalidShapeException e) { - throw new IllegalArgumentException("Invalid shape in WKT: " + wellKnownText + " " + e.getMessage()); - } - } + } catch (AssertionError | ParseException e) { + throw new IllegalArgumentException("Cannot parse simple WKT: " + wellKnownText + " " + e.getMessage()); + } catch (InvalidShapeException e) { + throw new IllegalArgumentException("Invalid shape in WKT: " + wellKnownText + " " + e.getMessage()); + } + } + + private static void validatePolygon(Polygon polygon, String wellKnownText) { + // Calculating the area > 0 ensures that polygons that are representing lines or points are invalidated + if (polygon.getArea() == 0.0) { + throw new IllegalArgumentException("Polygon with zero area: " + polygon.toText()); + } + + // Exterior ring must be anticlockwise + boolean isCCW = Orientation.isCCW(polygon.getExteriorRing().getCoordinates()); + if (!isCCW) { + String reversedText = polygon.getExteriorRing().reverse().toText(); + throw new IllegalArgumentException("Polygon with clockwise exterior ring: " + wellKnownText + + ". Did you mean these coordinates? (Note this is only part of the polygon or multipolygon you provided.) " + + reversedText); + } + + // Interior rings must be clockwise + for (int r = 0; r < polygon.getNumInteriorRing(); r++) { + isCCW = Orientation.isCCW(polygon.getInteriorRingN(r).getCoordinates()); + if (isCCW) { + String reversedText = polygon.getInteriorRingN(r).reverse().toText(); + throw new IllegalArgumentException("Polygon with anticlockwise interior ring: " + wellKnownText + + ". Did you mean these coordinates? (Note this is only part of the polygon or multipolygon you provided.) " + + reversedText); + } + } + } /** * Validates if the value is a valid single integer or a range of integer values. @@ -391,46 +428,46 @@ * @throws IllegalArgumentException if value is invalid or null */ private static Collection<Integer> validateInteger(String value) { - if (StringUtils.isEmpty(value)) { - throw new IllegalArgumentException("Integer cannot be null or empty"); + if (StringUtils.isEmpty(value)) { + throw new IllegalArgumentException("Integer cannot be null or empty"); } try { - List<Integer> list = new ArrayList<>(); - list.add(Integer.parseInt(value)); - return list; - } catch (NumberFormatException e) { - Range<Integer> range = parseIntegerRange(value); - List<Integer> ints = new ArrayList<>(); - if (range.hasLowerBound()) { - ints.add(range.lowerEndpoint()); + List<Integer> list = new ArrayList<>(); + list.add(Integer.parseInt(value)); + return list; + } catch (NumberFormatException e) { + Range<Integer> range = parseIntegerRange(value); + List<Integer> ints = new ArrayList<>(); + if (range.hasLowerBound()) { + ints.add(range.lowerEndpoint()); } - if (range.hasUpperBound()) { - ints.add(range.upperEndpoint()); + if (range.hasUpperBound()) { + ints.add(range.upperEndpoint()); } - return ints; + return ints; } } private static void validateGeoDistance(String geoDistance) { - if (StringUtils.isEmpty(geoDistance)) { - throw new IllegalArgumentException("GeoDistance cannot be null or empty"); + if (StringUtils.isEmpty(geoDistance)) { + throw new IllegalArgumentException("GeoDistance cannot be null or empty"); } - String[] geoDistanceTokens = geoDistance.split(","); - if (geoDistanceTokens.length != 3) { - throw new IllegalArgumentException("GeoDistance must follow the format lat,lng,distance"); + String[] geoDistanceTokens = geoDistance.split(","); + if (geoDistanceTokens.length != 3) { + throw new IllegalArgumentException("GeoDistance must follow the format lat,lng,distance"); } - validateGeoDistance(geoDistanceTokens[0], geoDistanceTokens[1], geoDistanceTokens[2]); - } + validateGeoDistance(geoDistanceTokens[0], geoDistanceTokens[1], geoDistanceTokens[2]); + } public static void validateGeoDistance(String latitude, String longitude, String distance) { - validateLatitude(latitude); - validateLongitude(longitude); - DistanceUnit.Distance parsedDistance = DistanceUnit.parseDistance(distance); - if (parsedDistance.getValue() <= 0d) { - throw new IllegalArgumentException("GeoDistance cannot be less than zero"); + validateLatitude(latitude); + validateLongitude(longitude); + DistanceUnit.Distance parsedDistance = DistanceUnit.parseDistance(distance); + if (parsedDistance.getValue() <= 0d) { + throw new IllegalArgumentException("GeoDistance cannot be less than zero"); } - } + } /** * Parses a distance range in the format 123m,456km. @@ -439,44 +476,44 @@ * @throws IllegalArgumentException if value is invalid or null */ public static Range<DistanceUnit.Distance> parseDistanceRange(String value) { - if (StringUtils.isNotEmpty(value)) { - Matcher m = DECIMAL_RANGE_PATTERN.matcher(value); - if (m.find()) { - return Range.closed(parseDistance(m.group(1)), parseDistance(m.group(2))); + if (StringUtils.isNotEmpty(value)) { + Matcher m = DECIMAL_RANGE_PATTERN.matcher(value); + if (m.find()) { + return Range.closed(parseDistance(m.group(1)), parseDistance(m.group(2))); } } - throw new IllegalArgumentException("Invalid distance range: " + value); + throw new IllegalArgumentException("Invalid distance range: " + value); } public static DistanceUnit.Distance parseDistance(String distance) { - DistanceUnit.Distance parsedDistance = DistanceUnit.parseDistance(distance); - if (parsedDistance.getValue() <= 0d) { - throw new IllegalArgumentException("Distance cannot be less than zero"); + DistanceUnit.Distance parsedDistance = DistanceUnit.parseDistance(distance); + if (parsedDistance.getValue() <= 0d) { + throw new IllegalArgumentException("Distance cannot be less than zero"); } - return parsedDistance; + return parsedDistance; } /** * Validates if the parameter is a valid latitude value. */ private static void validateLatitude(String value) { - validateDoubleInRange(value, LATITUDE_RNG, LATITUDE_ERROR_MSG); - } + validateDoubleInRange(value, LATITUDE_RNG, LATITUDE_ERROR_MSG); + } /** * Validates if the parameter is a valid longitude value. */ private static void validateLongitude(String value) { - validateDoubleInRange(value, LONGITUDE_RNG, LONGITUDE_ERROR_MSG); - } + validateDoubleInRange(value, LONGITUDE_RNG, LONGITUDE_ERROR_MSG); + } private static void validateMonth(Collection<Integer> months) { - for (Integer month : months) { - if (month != null && (month < 1 || month > 12)) { - throw new IllegalArgumentException("Month needs to be between 1 - 12"); + for (Integer month : months) { + if (month != null && (month < 1 || month > 12)) { + throw new IllegalArgumentException("Month needs to be between 1 - 12"); } - } - } + } + } }
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file diff --git a/jacoco/org.gbif.api.util/index.html b/jacoco/org.gbif.api.util/index.html index 3d83933cfa..c4478ef1d3 100644 --- a/jacoco/org.gbif.api.util/index.html +++ b/jacoco/org.gbif.api.util/index.html @@ -1 +1 @@ -org.gbif.api.util

org.gbif.api.util

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethodsMissedClasses
Total1,265 of 3,78666%240 of 54555%22346025080951169321
MachineTagUtils2210%400%33334545131311
ClassificationUtils20515643%442435%44606110141201
ContactAdapter1800%300%27274040121211
SearchTypeValidator16656077%238378%22742416132101
CitationGenerator.CitationData1091914%220%1519144801
CitationGenerator8350585%204468%19561813512401
IsoDateParsingUtils7519372%122668%112614490701
IsoDateParsingUtils.IsoDateFormat4722882%71568%7207550601
IdentifierUtils415657%121147%91811232501
IsoDateInterval3127189%54389%83865931401
RangeValue303956%8850%11137184501
Range298975%51777%4207201901
CitationGenerator.CitationData.CitationDataBuilder172155%n/a15011501
LenientEqualsUtils130%60%44111111
PreconditionUtils1275%1375%14160201
VocabularyUtils12497%3975%3142270801
UnicodeUtils8096%4100%151271301
LengthUtils2086%n/a13131301
AnnotationUtils1178%n/a01250101
URIValidator2592%2675%27170301
DatasetKey112100%12100%0130230701
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file +org.gbif.api.util

org.gbif.api.util

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethodsMissedClasses
Total1,266 of 3,87867%240 of 55556%22346625082551170321
MachineTagUtils2210%400%33334545131311
ClassificationUtils20515643%442435%44606110141201
ContactAdapter1800%300%27274040121211
SearchTypeValidator16765179%239380%22802417732201
CitationGenerator.CitationData1091914%220%1519144801
CitationGenerator8350585%204468%19561813512401
IsoDateParsingUtils7519372%122668%112614490701
IsoDateParsingUtils.IsoDateFormat4722882%71568%7207550601
IdentifierUtils415657%121147%91811232501
IsoDateInterval3127189%54389%83865931401
RangeValue303956%8850%11137184501
Range298975%51777%4207201901
CitationGenerator.CitationData.CitationDataBuilder172155%n/a15011501
LenientEqualsUtils130%60%44111111
PreconditionUtils1275%1375%14160201
VocabularyUtils12497%3975%3142270801
UnicodeUtils8096%4100%151271301
LengthUtils2086%n/a13131301
AnnotationUtils1178%n/a01250101
URIValidator2592%2675%27170301
DatasetKey112100%12100%0130230701
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file diff --git a/jacoco/org.gbif.api.util/index.source.html b/jacoco/org.gbif.api.util/index.source.html index 2a01c84d82..ab1fbe97ca 100644 --- a/jacoco/org.gbif.api.util/index.source.html +++ b/jacoco/org.gbif.api.util/index.source.html @@ -1 +1 @@ -org.gbif.api.util

org.gbif.api.util

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethodsMissedClasses
Total1,265 of 3,78666%240 of 54555%22346025080951169321
MachineTagUtils.java2210%400%33334545131311
CitationGenerator.java20954572%424451%35801913963703
ClassificationUtils.java20515643%442435%44606110141201
ContactAdapter.java1800%300%27274040121211
SearchTypeValidator.java16656077%238378%22742416132101
IsoDateParsingUtils.java12242177%194168%18462110401302
IdentifierUtils.java415657%121147%91811232501
IsoDateInterval.java3127189%54389%83865931401
RangeValue.java303956%8850%11137184501
Range.java298975%51777%4207201901
LenientEqualsUtils.java130%60%44111111
PreconditionUtils.java1275%1375%14160201
VocabularyUtils.java12497%3975%3142270801
UnicodeUtils.java8096%4100%151271301
LengthUtils.java2086%n/a13131301
AnnotationUtils.java1178%n/a01250101
URIValidator.java2592%2675%27170301
DatasetKey.java112100%12100%0130230701
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file +org.gbif.api.util

org.gbif.api.util

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethodsMissedClasses
Total1,266 of 3,87867%240 of 55556%22346625082551170321
MachineTagUtils.java2210%400%33334545131311
CitationGenerator.java20954572%424451%35801913963703
ClassificationUtils.java20515643%442435%44606110141201
ContactAdapter.java1800%300%27274040121211
SearchTypeValidator.java16765179%239380%22802417732201
IsoDateParsingUtils.java12242177%194168%18462110401302
IdentifierUtils.java415657%121147%91811232501
IsoDateInterval.java3127189%54389%83865931401
RangeValue.java303956%8850%11137184501
Range.java298975%51777%4207201901
LenientEqualsUtils.java130%60%44111111
PreconditionUtils.java1275%1375%14160201
VocabularyUtils.java12497%3975%3142270801
UnicodeUtils.java8096%4100%151271301
LengthUtils.java2086%n/a13131301
AnnotationUtils.java1178%n/a01250101
URIValidator.java2592%2675%27170301
DatasetKey.java112100%12100%0130230701
Created with JaCoCo 0.8.6.202009150832
\ No newline at end of file diff --git a/licenses.html b/licenses.html index 158f36efad..bb5c5fc190 100644 --- a/licenses.html +++ b/licenses.html @@ -1,6 +1,6 @@ @@ -28,8 +28,8 @@
  • GBIF/
  • GBIF Common :: API/
  • Project Licenses
    • -
  • | Last Published: 2024-02-28
    • -
  • Version: 1.14.0
    • +
  • | Last Published: 2024-02-29
    • +
  • Version: 1.14.1
    • diff --git a/plugin-management.html b/plugin-management.html index a642e6485d..c19f1c578e 100644 --- a/plugin-management.html +++ b/plugin-management.html @@ -1,6 +1,6 @@ @@ -28,8 +28,8 @@
  • GBIF/
  • GBIF Common :: API/
  • Project Plugin Management
    • -
  • | Last Published: 2024-02-28
    • -
  • Version: 1.14.0
    • +
  • | Last Published: 2024-02-29
    • +
  • Version: 1.14.1
    • diff --git a/plugins.html b/plugins.html index 382003f1fb..1a97c44cf2 100644 --- a/plugins.html +++ b/plugins.html @@ -1,6 +1,6 @@ @@ -28,8 +28,8 @@
  • GBIF/
  • GBIF Common :: API/
  • Project Plugins
    • -
  • | Last Published: 2024-02-28
    • -
  • Version: 1.14.0
    • +
  • | Last Published: 2024-02-29
    • +
  • Version: 1.14.1
    • diff --git a/project-info.html b/project-info.html index cfd6b6cd53..c6b878e3f2 100644 --- a/project-info.html +++ b/project-info.html @@ -1,6 +1,6 @@ @@ -28,8 +28,8 @@
  • GBIF/
  • GBIF Common :: API/
  • Project Information
    • -
  • | Last Published: 2024-02-28
    • -
  • Version: 1.14.0
    • +
  • | Last Published: 2024-02-29
    • +
  • Version: 1.14.1
    • diff --git a/project-reports.html b/project-reports.html index c75ee72011..66276f1353 100644 --- a/project-reports.html +++ b/project-reports.html @@ -1,6 +1,6 @@ @@ -28,8 +28,8 @@
  • GBIF/
  • GBIF Common :: API/
  • Generated Reports
    • -
  • | Last Published: 2024-02-28
    • -
  • Version: 1.14.0
    • +
  • | Last Published: 2024-02-29
    • +
  • Version: 1.14.1
    • diff --git a/scm.html b/scm.html index 5c26ff6f8d..32cc8adad2 100644 --- a/scm.html +++ b/scm.html @@ -1,6 +1,6 @@ @@ -28,8 +28,8 @@
  • GBIF/
  • GBIF Common :: API/
  • Source Code Management
    • -
  • | Last Published: 2024-02-28
    • -
  • Version: 1.14.0
    • +
  • | Last Published: 2024-02-29
    • +
  • Version: 1.14.1
    • @@ -77,10 +77,10 @@

    Web Browser Access

    https://github.com/gbif/gbif-api

    Anonymous Access

    The source can be checked out anonymously from Git with this command (See https://git-scm.com/docs/git-clone):

    -
    $ git clone --branch gbif-api-1.14.0 git@github.com:gbif/gbif-api.git
    +
    $ git clone --branch gbif-api-1.14.1 git@github.com:gbif/gbif-api.git

    Developer Access

    Only project developers can access the Git tree via this method (See https://git-scm.com/docs/git-clone).

    -
    $ git clone --branch gbif-api-1.14.0 git@github.com:gbif/gbif-api.git
    +
    $ git clone --branch gbif-api-1.14.1 git@github.com:gbif/gbif-api.git

    Access from Behind a Firewall

    Refer to the documentation of the SCM used for more information about access behind a firewall.

    diff --git a/summary.html b/summary.html index f3700f9997..506f61c77a 100644 --- a/summary.html +++ b/summary.html @@ -1,6 +1,6 @@ @@ -28,8 +28,8 @@
  • GBIF/
  • GBIF Common :: API/
  • Project Summary
    • -
  • | Last Published: 2024-02-28
    • -
  • Version: 1.14.0
    • +
  • | Last Published: 2024-02-29
    • +
  • Version: 1.14.1
    • @@ -109,7 +109,7 @@

    Build Information

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