From 5709d983f90d79c4273ecf43e490d59f4487e5cd Mon Sep 17 00:00:00 2001 From: Yossi Farjoun Date: Thu, 19 Sep 2024 12:38:07 -0400 Subject: [PATCH] docs --- fgpyo/sam/__init__.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/fgpyo/sam/__init__.py b/fgpyo/sam/__init__.py index 92b35bd..76fe6fb 100644 --- a/fgpyo/sam/__init__.py +++ b/fgpyo/sam/__init__.py @@ -550,8 +550,8 @@ def length_on_target(self) -> int: def get_query_alignment_offsets(self, reverse: bool = False) -> Optional[range]: """ Get the 0-based, end-exclusive positions of the first and last aligned base in the query. - The resulting range will contain the range of positions in the SEQ string for the bases t - hat are aligned. If no bases are aligned, the return value will be None. + The resulting range will contain the range of positions in the SEQ string for the bases + that are aligned. If no bases are aligned, the return value will be None. Args: reverse: If True, count from the end of the query. i.e. find the offsets