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  • Italian Institue of Technology
  • Naples

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  1. Annocript Annocript Public

    Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved Domain Database and Nucleotide divisions, Gene Ontology, UniP…

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  2. VarGenius VarGenius Public

    VarGenius is a software for variants discovery and annotation. It allows efficient management of folder data and jobs submission into a PBS cluster. All the variants will be inserted into a Postgre…

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  3. DEA DEA Public

    Differential Expression analysis with Annocript (DEA) is a little package to make useful differential gene expression analyses and plots with GO and UniPathway enrichments.

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  4. bioperl-live bioperl-live Public

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    Core BioPerl 1.x code

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  5. Annocript_utils Annocript_utils Public

    A set of utilities to use with Annocript

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  6. hts-specs hts-specs Public

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    Specifications of SAM/BAM and related high-throughput sequencing file formats

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