From 4f0339ef507a3215b4d1e5edc197223be4684c4a Mon Sep 17 00:00:00 2001 From: paugier Date: Sun, 4 Feb 2024 21:41:03 +0100 Subject: [PATCH] Work on fixing CIs --- .github/workflows/ci-linux.yml | 1 + .github/workflows/ci-pixi.yml | 13 +- .gitlab-ci.yml | 10 +- noxfile.py | 10 +- pixi.lock | 5763 ++++++++++++++++++++++---- pixi.toml | 8 +- plugins/fluidfft-fftwmpi/meson.build | 2 +- 7 files changed, 4975 insertions(+), 832 deletions(-) diff --git a/.github/workflows/ci-linux.yml b/.github/workflows/ci-linux.yml index 06895f1..047be24 100644 --- a/.github/workflows/ci-linux.yml +++ b/.github/workflows/ci-linux.yml @@ -38,6 +38,7 @@ jobs: - name: Run tests run: | + ls /usr/lib/x86_64-linux-gnu/libfftw3* nox --session "tests(with_cov=True, with_mpi=False)" make cleanall nox --session "tests(with_cov=True, with_mpi=True)" diff --git a/.github/workflows/ci-pixi.yml b/.github/workflows/ci-pixi.yml index ac7cf87..86f1dae 100644 --- a/.github/workflows/ci-pixi.yml +++ b/.github/workflows/ci-pixi.yml @@ -6,12 +6,14 @@ on: jobs: tests: - runs-on: ${{ matrix.os }}-latest + runs-on: ${{ matrix.os }} strategy: fail-fast: false matrix: - os: ["windows-2022", "macos-latest"] - python-version: ["3.9", "3.10", "3.11"] + # os: ["windows-2022", "macos-latest"] + # python-version: ["3.9", "3.10", "3.11"] + os: ["windows-2022"] + python-version: ["3.10"] defaults: run: shell: bash -l {0} @@ -25,6 +27,11 @@ jobs: run: | pixi run install-editable pixi run pip install plugins/fluidfft-fftw -v --no-build-isolation --no-deps + - name: Show meson-log.txt + if: always() + run: | + cat build/cp310/meson-logs/meson-log.txt + cat 'D:\a\fluidfft\fluidfft\.pixi\env\Scripts\transonic-get-include' - name: Tests run: | pixi run pytest -v tests plugins/fluidfft-fftw diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index a507a6c..83ab3a6 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -25,14 +25,15 @@ workflow: pixi-test: stage: pixi - image: $DOCKER_IMAGE_PATH:pixi + image: registry.heptapod.net:443/fluiddyn/fluidsim/ci/default:pixi script: - pixi info - pixi run install-editable - pixi run pip install plugins/fluidfft-fftw -v --no-build-isolation --no-deps - - pixi run pip install plugins/fluidfft-mpi_with_fftw -v --no-build-isolation --no-deps - - pixi run pytest -v tests plugins/fluidfft-fftw - - pixi run mpirun -np 2 pytest -v plugins/fluidfft-mpi_with_fftw + - pixi run pytest -v tests + - pixi run pytest -v plugins/fluidfft-fftw + # - pixi run pip install plugins/fluidfft-mpi_with_fftw -v --no-build-isolation --no-deps + # - pixi run mpirun -np 2 pytest -v plugins/fluidfft-mpi_with_fftw # Build an image for the other tasks; this should be a scheduled job, as @@ -95,6 +96,7 @@ tests_mpi: - job: "image:build" optional: true script: + - ls /usr/lib/x86_64-linux-gnu/libfftw3* - nox -s "tests(with_cov=True, with_mpi=True)" diff --git a/noxfile.py b/noxfile.py index f0e3b5c..7f2960d 100644 --- a/noxfile.py +++ b/noxfile.py @@ -63,7 +63,7 @@ def tests(session, with_mpi, with_cov): session.install( "-e", "plugins/fluidfft-mpi_with_fftw", "--no-build-isolation", "-v" ) - session.install("-e", "plugins/fluidfft-fftwmpi", "--no-build-isolation", "-v") + # session.install("-e", "plugins/fluidfft-fftwmpi", "--no-build-isolation", "-v") def run_command(command, **kwargs): session.run(*command.split(), **kwargs) @@ -96,10 +96,10 @@ def run_command(command, **kwargs): "mpirun -np 2 --oversubscribe pytest -v plugins/fluidfft-mpi_with_fftw", external=True, ) - run_command( - "mpirun -np 2 --oversubscribe pytest -v plugins/fluidfft-fftwmpi", - external=True, - ) + # run_command( + # "mpirun -np 2 --oversubscribe pytest -v plugins/fluidfft-fftwmpi", + # external=True, + # ) if with_cov: if with_mpi: diff --git a/pixi.lock b/pixi.lock index 9cd66d0..2aef49a 100644 --- a/pixi.lock +++ b/pixi.lock @@ -2,12 +2,14 @@ version: 3 metadata: content_hash: linux-64: e90c2ee71ad70fc0a1c8302029533a7d1498f2bffcd0eaa8d2934700e775dc1d + osx-64: e90c2ee71ad70fc0a1c8302029533a7d1498f2bffcd0eaa8d2934700e775dc1d win-64: e90c2ee71ad70fc0a1c8302029533a7d1498f2bffcd0eaa8d2934700e775dc1d channels: - 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platform: win-64 name: zstd version: 1.5.5 diff --git a/pixi.toml b/pixi.toml index bcf3411..3da865e 100644 --- a/pixi.toml +++ b/pixi.toml @@ -7,7 +7,7 @@ [project] name = "fluidsim" channels = ["conda-forge"] -platforms = ["linux-64", "win-64"] +platforms = ["linux-64", "win-64", "osx-64"] [tasks] # use as `pixi run install-editable` @@ -36,11 +36,13 @@ ipython = ">=8.20.0" coverage = ">=7.4.0" pytest-cov = ">=4.1.0" pytest-mock = ">=3.12.0" -fluidfft = ">=0.2.9" -mpi4py = ">=3.1.5" ninja = ">=1.11.1,<1.12" meson = ">=1.3.1,<1.4" meson-python = ">=0.15.0,<0.16" +cython = ">=3.0.8,<3.1" +fftw = ">=3.3.10,<3.4" +pkg-config = ">=0.29.2,<0.30" +pyfftw = ">=0.13.1,<0.14" [pypi-dependencies] pymech = "*" diff --git a/plugins/fluidfft-fftwmpi/meson.build b/plugins/fluidfft-fftwmpi/meson.build index 9e8f180..f278bba 100644 --- a/plugins/fluidfft-fftwmpi/meson.build +++ b/plugins/fluidfft-fftwmpi/meson.build @@ -17,7 +17,7 @@ mpi_dep = dependency('mpi', language: 'cpp') # fftwmpi_dep = dependency('fftw3-mpi', static: false) compiler = meson.get_compiler('cpp') -fftwmpi_dep = compiler.find_library('libfftw_mpi', required: true) +fftwmpi_dep = compiler.find_library('fftw_mpi', required: true) py_mod = import('python') py = py_mod.find_installation('python3', pure: false)