Skip to content
/ bedops Public
forked from bedops/bedops

BEDOPS: high-performance genomic feature operations

License

Notifications You must be signed in to change notification settings

esrice/bedops

 
 

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

BEDOPS v2.4.2: high-performance genomic feature operations

About

BEDOPS v2.4.2 is a suite of tools to address common questions raised in genomic studies — mostly with regard to overlap and proximity relationships between data sets. It aims to be scalable and flexible, facilitating the efficient and accurate analysis and management of large-scale genomic data.

The overview section of the BEDOPS v2.4.2 documentation summarizes the toolkit, functionality and performance enhancements. The reference table offers documentation for all applications and scripts.

Downloads

linux_png macosx_png source_png

Documentation

Complete documentation for BEDOPS v2.4.2 tools is available at: https://bedops.readthedocs.org/

Citation

If you use BEDOPS v2.4.2 in your research, please cite the following manuscript:

Shane Neph, M. Scott Kuehn, Alex P. Reynolds, et al.
[BEDOPS: high-performance genomic feature operations
Bioinformatics (2012) 28 (14): 1919-1920.] (http://bioinformatics.oxfordjournals.org/content/28/14/1919.abstract)

Copyright

Copyright (C) 2011, 2012, 2013, 2014 Shane J. Neph, M. Scott Kuehn and Alex P. Reynolds

Source code, documentation and media assets released under GNU Public License Version 2 (GPL v2).

Bitdeli Badge

githalytics.com alpha

About

BEDOPS: high-performance genomic feature operations

Resources

License

Stars

Watchers

Forks

Packages

No packages published

Languages

  • C++ 36.6%
  • C 35.2%
  • Python 17.3%
  • Shell 5.0%
  • JavaScript 3.2%
  • Perl 1.3%
  • Other 1.4%