This project aims to create a library that translates between GA4GH Cloud API schemas and RO-Crate profiles to facilitate reproducibility in scientific research. The tool will enable the packaging and sharing of task/tool and workflow runs, allowing other researchers to reproduce them or use parts of them.
The CrateGen Tool is designed to compile RO-Crates from tool and workflow executions in GA4GH Cloud API-powered cloud infrastructures. This will allow easy re-execution of these computational analyses, thus improving the reporting and reproducibility of computational research. Additionally, it will allow the creation of WES/TES calls from existing WRROCs, enabling a dual functionality.
To install the necessary dependencies, run the following command:
pip install -r requirements.txtWe welcome contributions from the community. Please fork the repository and create a pull request for any changes. Make sure to follow the coding standards and include tests for any new functionality.
This project is distributed under the Apache License 2.0, a
copy of which is also available in LICENSE.
The project is maintained by ELIXIR Cloud & AAI.
- For filing bug reports, feature requests or other code-related issues, please make use of the project's issue tracker.