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rig-cohesa.qmd
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---
title: The Research Information Gateway
subtitle: A tool to link research, expertise, and surveillance for One Health in Africa
author: EcoHealth Alliance
institute: ""
date: "4 September 2024"
title-slide-attributes:
data-background-image: ""
---
## Outline
<br/>
* Purpose
* Structure and interface
* Technology
* Use cases
## Research Information Gateway
<br/>
* Prototype database designed as new module for Africa CDC Knowledge Hub
* A detailed, searchable, and visual database of One Health research projects
* Directory of subject matter experts for public health practitioners
* Visual and functional dashboard and interfaces for ease of use
## Research Information Gateway in a One Health Community of Practice
<br/>
:::: {.columns}
::: {.column width="50%"}
#### CoP goals and functions
* Link subject matter experts with surveillance
* Share resources in outbreak response
* Improved awareness of research activities
* Informed strategic research agenda planning
:::
::: {.column width="50%"}
#### Enabling technology
* Searchable, up-to-date directory of researchers
* Track on-the-ground capacity
* Map ongoing research and surveillance projects
* Analyse gaps and priorities in current research
:::
::::
## A One Health Scope
<br/>
* A focus on zoonotic diseases based on Africa CDC’s Framework for One Health Practice in National Public Health Institutes (2020), and Event Based Surveillance Framework (2018)
- **Activities**, **Researchers**, and **Topics** that are
- Related to **zoonotic disease**: infectious diseases that can be spread between animals and humans; can be spread by food, water, fomites or vectors
- In or related to **African countries**
## Data sources and flow
<br/>
```{mermaid}
%%| out.width: 300px
%%| fig.align: center
flowchart LR
input1(["Research Funder\nand\nInstitution data"])
input2(["Web\nscraping"])
input3(["Literature\nSearch"])
input4(["Expert Surveys\n(planned)"])
action[/"Curation\nCross-linking\nValidation"/]
output1[("On-the-ground\nactivities")]
output2[("Experts\nand\nresearchers")]
output3[("Funders")]
input1 ==> action
input2 ==> action
input3 ==> action
input4 ==> action
action ==> output1
action ==> output2
action ==> output3
```
## Development pathway
<br/>
```{mermaid}
%%| out.width: 300px
%%| fig.align: center
flowchart TD
airtable[Airtable]
airtable_interface[/Airtable Interfaces/]
dolt[dolt]
dolthub[dolthub]
khub("Knowledge\nHub")
dashboard(Dashboard)
research("Research\nworkflow")
api[/API/]
airtable --> dolt -->|powers|dolthub
airtable -->|feeds|airtable_interface
dolthub <--> api <--> khub
dolthub <--> api <--> dashboard
dolthub <--> api <--> research
```
## Development updates
<br/>
* Africa CDC colleagues are integrating the database to the Knowledge Hub
* Updating database with new sources and funders then will add activities and researchers
* search for new funders led to Pandemic PACT initiative - lots of overlap with database and has more records (9000+)
* Streamlining of fields in the main tables for **Activities** and **Researchers**