Question on Data Splitting

[chao1224]

Hi there, I have some questions about the data splitting on LBA.

I'm not sure if these three indices txt files are already generated in the previous steps (https://github.com/drorlab/atom3d/blob/master/examples/lba/dataset/prepare_lmdb.py#L156-L161).

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Follow-up:
I checked the code base again, and found the identity split function. But I haven't found the scripts for running them. Then the remaining question is how to set the blast_db variable.

[awfderry]

The blast_db argument is used to specify a pre-computed BLAST database for your sequences. If you don't have it precomputed, the default functionality of identity_split should compute it for you and save in the current directory as "blast_db". Hope this helps!

[chao1224]

Thank you!

Just want to double-check.
According to these lines, do we need to take some extra config for the blast_db?