From 3153e3496408a0d99e5f9548d7ae0c4dcbb7a5e8 Mon Sep 17 00:00:00 2001 From: juli-p <63345753+juli-p@users.noreply.github.com> Date: Mon, 2 Oct 2023 12:29:54 +0200 Subject: [PATCH] e2e test more verbose --- test/e2e/test_container.sh | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/test/e2e/test_container.sh b/test/e2e/test_container.sh index 4dc27e1ed..725e410d4 100755 --- a/test/e2e/test_container.sh +++ b/test/e2e/test_container.sh @@ -103,15 +103,21 @@ python ./run/NeEDL.py \ # check that no NA values are present for dir in "$out_dir"/* ; do + echo "NAN Check: entering directory '$dir'" + if [ -f "$dir/BIOGRID_seeds.csv" ]; then if grep -Fxq "nan" "$dir/BIOGRID_seeds.csv"; then die 1 "'nan' found in $dir/BIOGRID_seeds.csv" + elif + echo "NAN Check: $dir/BIOGRID_seeds.csv passed" fi fi if [ -f "$dir/BIOGRID_results.csv" ]; then if grep -Fxq "nan" "$dir/BIOGRID_results.csv"; then die 1 "'nan' found in $dir/BIOGRID_results.csv" + elif + echo "NAN Check: $dir/BIOGRID_results.csv passed" fi fi