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Running Kilosort3 on a CPU -- is it possible? #270

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cgallimore25 opened this issue Jul 16, 2024 · 0 comments
Open

Running Kilosort3 on a CPU -- is it possible? #270

cgallimore25 opened this issue Jul 16, 2024 · 0 comments

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@cgallimore25
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I found I can circumvent some of the initial gpuArray errors by setting ks.ops.GPU= 0; which allows me to at least view my data (preprocessed beforehand via highpass filtering and common average referencing prior to writing to a .bin file). Some pre-processing steps inside of kilosort (e.g. whitening filter) seem dependent on GPU operations.

Must i look towards Kilosort4 in python, else get a GPU?
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@cgallimore25