Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Peak activity and template appear on different channels #254

Open
xy103 opened this issue Feb 11, 2022 · 0 comments
Open

Peak activity and template appear on different channels #254

xy103 opened this issue Feb 11, 2022 · 0 comments

Comments

@xy103
Copy link

xy103 commented Feb 11, 2022

Hi, I'm using kilosort 2.5 wrapped inside ecephys pipeline to run spike sorting. For some of my sessions, I'm seeing the channel of peak activity differ from that of the template (see attached for example). I've looked at previous posts on the phy github but the solutions posted there (use dev env and set show_mapped_channels = False) didn't solve my problem. Do you think this could be a bug in kilosort/phy, or perhaps an issue with my recording stability on some sessions? Really appreciate any help!

template
waveform

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant