From e6f4fc93bf5feb12d39651441ae45d0bf89e4994 Mon Sep 17 00:00:00 2001 From: Dom Heinzeller Date: Thu, 17 Aug 2023 15:38:18 -0600 Subject: [PATCH] Update parallelio to 2.5.10 in configs/common/packages.yaml and configs/containers/README.md --- configs/common/packages.yaml | 4 ++-- configs/containers/README.md | 14 +++++--------- configs/templates/unified-dev/spack.yaml | 4 ---- 3 files changed, 7 insertions(+), 15 deletions(-) diff --git a/configs/common/packages.yaml b/configs/common/packages.yaml index fd801d39d..f393a38cc 100644 --- a/configs/common/packages.yaml +++ b/configs/common/packages.yaml @@ -121,7 +121,7 @@ libyaml: version: ['0.2.5'] mapl: - # 2.35.2 goes with esmf@8.4.1 + # 2.35.2 goes with esmf@8.4.2 version: ['2.35.2'] variants: ~shared met: @@ -171,7 +171,7 @@ p4est: version: ['2.8'] parallelio: - version: ['2.5.9'] + version: ['2.5.10'] variants: +pnetcdf parallel-netcdf: version: ['1.12.2'] diff --git a/configs/containers/README.md b/configs/containers/README.md index 3f9e4df8f..db07acf2d 100644 --- a/configs/containers/README.md +++ b/configs/containers/README.md @@ -2,7 +2,7 @@ To avoid hardcoding specs in the generic container recipes, we keep the specs list empty (`specs: []`) and manually add the specs for the particular spack-stack release and application as listed below, *after* running `spack stack create ctr`. -### spack-stack-1.4.1 / skylab-5.0.0 containers for fv3-jedi and mpas-jedi (but not for ufs-jedi) +### spack-stack-1.5.0 / skylab-6.0.0 containers for fv3-jedi and mpas-jedi (but not for ufs-jedi) ``` specs: [base-env@1.0.0, jedi-base-env@1.0.0 ~fftw, ewok-env@1.0.0, jedi-fv3-env@1.0.0, jedi-mpas-env@1.0.0, bacio@2.4.1, bison@3.8.2, bufr@12.0.0, ecbuild@3.7.2, eccodes@2.27.0, ecflow@5, @@ -11,23 +11,19 @@ To avoid hardcoding specs in the generic container recipes, we keep the specs li gsibec@1.1.2, hdf@4.2.15, hdf5@1.14.1-2, ip@3.3.3, jasper@2.0.32, jedi-cmake@1.4.0, libpng@1.6.37, nccmp@1.9.0.1, netcdf-c@4.9.2, netcdf-cxx4@4.3.1, netcdf-fortran@4.6.0, nlohmann-json@3.10.5, nlohmann-json-schema-validator@2.1.0, - parallelio@2.5.9, parallel-netcdf@1.12.2, py-eccodes@1.4.2, py-f90nml@1.4.3, + parallelio@2.5.10, parallel-netcdf@1.12.2, py-eccodes@1.4.2, py-f90nml@1.4.3, py-gitpython@3.1.27, py-h5py@3.7.0, py-numpy@1.22.3, py-pandas@1.4.0, py-pip, py-pyyaml@6.0, py-scipy@1.9.3, py-shapely@1.8.0, py-xarray@2022.3.0, - sp@2.3.3, udunits@2.2.28, w3nco@2.4.1, nco@5.0.6, + sp@2.3.3, udunits@2.2.28, w3nco@2.4.1, nco@5.0.6, esmf@8.4.2, mapl@2.35.2, yafyaml@0.5.1, zlib@1.2.13, odc@1.4.6, shumlib@macos_clang_linux_intel_port] # Don't build CRTM by default so that it gets built in the JEDI bundles: # crtm@v2.4.1-jedi - # Don't build ESMF and MAPL for now: - # https://github.com/JCSDA-internal/MPAS-Model/issues/38 - # https://github.com/jcsda/spack-stack/issues/326 - # jedi-ufs-env@1.0.0, esmf@8.4.2, mapl@2.35.2 # Comment out for now until build problems are solved # https://github.com/jcsda/spack-stack/issues/522 # py-mysql-connector-python@8.0.32 ``` -### spack-stack-1.4.1 / ufs-weather-model-x.y.z containers for ufs-weather-model as of July 5, 2023 +### spack-stack-1.5.0 / ufs-weather-model-x.y.z containers for ufs-weather-model as of July 5, 2023 **Note. This is not yet working correctly, some libraries are missing. Please do not use yet! Also, if using the clang-mpich container, need to disable openmp for fms, not clear how to do this cleanly.** @@ -39,7 +35,7 @@ To avoid hardcoding specs in the generic container recipes, we keep the specs li gsibec@1.1.2, hdf@4.2.15, hdf5@1.14.1-2, ip@3.3.3, jasper@2.0.32, jedi-cmake@1.4.0, libpng@1.6.37, nccmp@1.9.0.1, netcdf-c@4.9.2, netcdf-cxx4@4.3.1, netcdf-fortran@4.6.0, nlohmann-json@3.10.5, nlohmann-json-schema-validator@2.1.0, - parallelio@2.5.9, parallel-netcdf@1.12.2, py-eccodes@1.4.2, py-f90nml@1.4.3, + parallelio@2.5.10, parallel-netcdf@1.12.2, py-eccodes@1.4.2, py-f90nml@1.4.3, py-gitpython@3.1.27, py-h5py@3.7.0, py-numpy@1.22.3, py-pandas@1.4.0, py-pip, py-pyyaml@6.0, py-scipy@1.9.3, py-shapely@1.8.0, py-xarray@2022.3.0, sp@2.3.3, udunits@2.2.28, w3emc@2.9.2, w3nco@2.4.1, nco@5.0.6, esmf@8.4.2, mapl@2.35.2, diff --git a/configs/templates/unified-dev/spack.yaml b/configs/templates/unified-dev/spack.yaml index caf4df879..91928d864 100644 --- a/configs/templates/unified-dev/spack.yaml +++ b/configs/templates/unified-dev/spack.yaml @@ -25,10 +25,6 @@ spack: #- upp-env #- ww3-env - # Additional esmf/mapl tags - #- esmf@8.4.2~debug+external-parallelio - #- mapl@2.35.2~debug ^esmf@8.4.2~debug+external-parallelio - # Additional crtm tags - crtm@v2.4-jedi.2 - crtm@v2.4.1-jedi