From 33dffe585dc9ea1b92669cc4138606ea8ed92612 Mon Sep 17 00:00:00 2001 From: nx10 Date: Mon, 11 Mar 2024 20:12:51 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20childmin?= =?UTF-8?q?dresearch/styx@9506592797aa836787a97cf80aa2c5d3bd1bd56f=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- search.js | 2 +- styx.html | 10 +- styx/compiler/core.html | 867 +++++++++++++++++++------------------ styx/runners.html | 2 +- styx/runners/docker.html | 819 +++++++++++++++++++++++++++++++++++ styx/runners/dummy.html | 78 +--- styx/runners/local.html | 233 ---------- styx/runners/styxdefs.html | 216 ++++----- 8 files changed, 1389 insertions(+), 838 deletions(-) create mode 100644 styx/runners/docker.html delete mode 100644 styx/runners/local.html diff --git a/search.js b/search.js index c5f14c5..9a2827e 100644 --- a/search.js +++ b/search.js @@ -1,6 +1,6 @@ window.pdocSearch = (function(){ /** elasticlunr - http://weixsong.github.io * Copyright (C) 2017 Oliver Nightingale * Copyright (C) 2017 Wei Song * MIT Licensed */!function(){function e(e){if(null===e||"object"!=typeof e)return e;var t=e.constructor();for(var n in e)e.hasOwnProperty(n)&&(t[n]=e[n]);return t}var t=function(e){var n=new t.Index;return n.pipeline.add(t.trimmer,t.stopWordFilter,t.stemmer),e&&e.call(n,n),n};t.version="0.9.5",lunr=t,t.utils={},t.utils.warn=function(e){return function(t){e.console&&console.warn&&console.warn(t)}}(this),t.utils.toString=function(e){return void 0===e||null===e?"":e.toString()},t.EventEmitter=function(){this.events={}},t.EventEmitter.prototype.addListener=function(){var e=Array.prototype.slice.call(arguments),t=e.pop(),n=e;if("function"!=typeof t)throw new TypeError("last argument must be a function");n.forEach(function(e){this.hasHandler(e)||(this.events[e]=[]),this.events[e].push(t)},this)},t.EventEmitter.prototype.removeListener=function(e,t){if(this.hasHandler(e)){var n=this.events[e].indexOf(t);-1!==n&&(this.events[e].splice(n,1),0==this.events[e].length&&delete this.events[e])}},t.EventEmitter.prototype.emit=function(e){if(this.hasHandler(e)){var t=Array.prototype.slice.call(arguments,1);this.events[e].forEach(function(e){e.apply(void 0,t)},this)}},t.EventEmitter.prototype.hasHandler=function(e){return e in this.events},t.tokenizer=function(e){if(!arguments.length||null===e||void 0===e)return[];if(Array.isArray(e)){var n=e.filter(function(e){return null===e||void 0===e?!1:!0});n=n.map(function(e){return t.utils.toString(e).toLowerCase()});var i=[];return n.forEach(function(e){var n=e.split(t.tokenizer.seperator);i=i.concat(n)},this),i}return e.toString().trim().toLowerCase().split(t.tokenizer.seperator)},t.tokenizer.defaultSeperator=/[\s\-]+/,t.tokenizer.seperator=t.tokenizer.defaultSeperator,t.tokenizer.setSeperator=function(e){null!==e&&void 0!==e&&"object"==typeof e&&(t.tokenizer.seperator=e)},t.tokenizer.resetSeperator=function(){t.tokenizer.seperator=t.tokenizer.defaultSeperator},t.tokenizer.getSeperator=function(){return t.tokenizer.seperator},t.Pipeline=function(){this._queue=[]},t.Pipeline.registeredFunctions={},t.Pipeline.registerFunction=function(e,n){n in t.Pipeline.registeredFunctions&&t.utils.warn("Overwriting existing registered function: "+n),e.label=n,t.Pipeline.registeredFunctions[n]=e},t.Pipeline.getRegisteredFunction=function(e){return e in t.Pipeline.registeredFunctions!=!0?null:t.Pipeline.registeredFunctions[e]},t.Pipeline.warnIfFunctionNotRegistered=function(e){var n=e.label&&e.label in this.registeredFunctions;n||t.utils.warn("Function is not registered with pipeline. This may cause problems when serialising the index.\n",e)},t.Pipeline.load=function(e){var n=new t.Pipeline;return e.forEach(function(e){var i=t.Pipeline.getRegisteredFunction(e);if(!i)throw new Error("Cannot load un-registered function: "+e);n.add(i)}),n},t.Pipeline.prototype.add=function(){var e=Array.prototype.slice.call(arguments);e.forEach(function(e){t.Pipeline.warnIfFunctionNotRegistered(e),this._queue.push(e)},this)},t.Pipeline.prototype.after=function(e,n){t.Pipeline.warnIfFunctionNotRegistered(n);var i=this._queue.indexOf(e);if(-1===i)throw new Error("Cannot find existingFn");this._queue.splice(i+1,0,n)},t.Pipeline.prototype.before=function(e,n){t.Pipeline.warnIfFunctionNotRegistered(n);var i=this._queue.indexOf(e);if(-1===i)throw new Error("Cannot find existingFn");this._queue.splice(i,0,n)},t.Pipeline.prototype.remove=function(e){var t=this._queue.indexOf(e);-1!==t&&this._queue.splice(t,1)},t.Pipeline.prototype.run=function(e){for(var t=[],n=e.length,i=this._queue.length,o=0;n>o;o++){for(var r=e[o],s=0;i>s&&(r=this._queue[s](r,o,e),void 0!==r&&null!==r);s++);void 0!==r&&null!==r&&t.push(r)}return t},t.Pipeline.prototype.reset=function(){this._queue=[]},t.Pipeline.prototype.get=function(){return this._queue},t.Pipeline.prototype.toJSON=function(){return this._queue.map(function(e){return t.Pipeline.warnIfFunctionNotRegistered(e),e.label})},t.Index=function(){this._fields=[],this._ref="id",this.pipeline=new t.Pipeline,this.documentStore=new t.DocumentStore,this.index={},this.eventEmitter=new t.EventEmitter,this._idfCache={},this.on("add","remove","update",function(){this._idfCache={}}.bind(this))},t.Index.prototype.on=function(){var e=Array.prototype.slice.call(arguments);return this.eventEmitter.addListener.apply(this.eventEmitter,e)},t.Index.prototype.off=function(e,t){return this.eventEmitter.removeListener(e,t)},t.Index.load=function(e){e.version!==t.version&&t.utils.warn("version mismatch: current "+t.version+" importing "+e.version);var n=new this;n._fields=e.fields,n._ref=e.ref,n.documentStore=t.DocumentStore.load(e.documentStore),n.pipeline=t.Pipeline.load(e.pipeline),n.index={};for(var i in e.index)n.index[i]=t.InvertedIndex.load(e.index[i]);return n},t.Index.prototype.addField=function(e){return this._fields.push(e),this.index[e]=new t.InvertedIndex,this},t.Index.prototype.setRef=function(e){return this._ref=e,this},t.Index.prototype.saveDocument=function(e){return this.documentStore=new t.DocumentStore(e),this},t.Index.prototype.addDoc=function(e,n){if(e){var n=void 0===n?!0:n,i=e[this._ref];this.documentStore.addDoc(i,e),this._fields.forEach(function(n){var o=this.pipeline.run(t.tokenizer(e[n]));this.documentStore.addFieldLength(i,n,o.length);var r={};o.forEach(function(e){e in r?r[e]+=1:r[e]=1},this);for(var s in r){var u=r[s];u=Math.sqrt(u),this.index[n].addToken(s,{ref:i,tf:u})}},this),n&&this.eventEmitter.emit("add",e,this)}},t.Index.prototype.removeDocByRef=function(e){if(e&&this.documentStore.isDocStored()!==!1&&this.documentStore.hasDoc(e)){var t=this.documentStore.getDoc(e);this.removeDoc(t,!1)}},t.Index.prototype.removeDoc=function(e,n){if(e){var n=void 0===n?!0:n,i=e[this._ref];this.documentStore.hasDoc(i)&&(this.documentStore.removeDoc(i),this._fields.forEach(function(n){var o=this.pipeline.run(t.tokenizer(e[n]));o.forEach(function(e){this.index[n].removeToken(e,i)},this)},this),n&&this.eventEmitter.emit("remove",e,this))}},t.Index.prototype.updateDoc=function(e,t){var t=void 0===t?!0:t;this.removeDocByRef(e[this._ref],!1),this.addDoc(e,!1),t&&this.eventEmitter.emit("update",e,this)},t.Index.prototype.idf=function(e,t){var n="@"+t+"/"+e;if(Object.prototype.hasOwnProperty.call(this._idfCache,n))return this._idfCache[n];var i=this.index[t].getDocFreq(e),o=1+Math.log(this.documentStore.length/(i+1));return this._idfCache[n]=o,o},t.Index.prototype.getFields=function(){return this._fields.slice()},t.Index.prototype.search=function(e,n){if(!e)return[];e="string"==typeof e?{any:e}:JSON.parse(JSON.stringify(e));var i=null;null!=n&&(i=JSON.stringify(n));for(var o=new t.Configuration(i,this.getFields()).get(),r={},s=Object.keys(e),u=0;u0&&t.push(e);for(var i in n)"docs"!==i&&"df"!==i&&this.expandToken(e+i,t,n[i]);return t},t.InvertedIndex.prototype.toJSON=function(){return{root:this.root}},t.Configuration=function(e,n){var e=e||"";if(void 0==n||null==n)throw new Error("fields should not be null");this.config={};var i;try{i=JSON.parse(e),this.buildUserConfig(i,n)}catch(o){t.utils.warn("user configuration parse failed, will use default configuration"),this.buildDefaultConfig(n)}},t.Configuration.prototype.buildDefaultConfig=function(e){this.reset(),e.forEach(function(e){this.config[e]={boost:1,bool:"OR",expand:!1}},this)},t.Configuration.prototype.buildUserConfig=function(e,n){var i="OR",o=!1;if(this.reset(),"bool"in e&&(i=e.bool||i),"expand"in e&&(o=e.expand||o),"fields"in e)for(var r in e.fields)if(n.indexOf(r)>-1){var s=e.fields[r],u=o;void 0!=s.expand&&(u=s.expand),this.config[r]={boost:s.boost||0===s.boost?s.boost:1,bool:s.bool||i,expand:u}}else t.utils.warn("field name in user configuration not found in index instance fields");else this.addAllFields2UserConfig(i,o,n)},t.Configuration.prototype.addAllFields2UserConfig=function(e,t,n){n.forEach(function(n){this.config[n]={boost:1,bool:e,expand:t}},this)},t.Configuration.prototype.get=function(){return this.config},t.Configuration.prototype.reset=function(){this.config={}},lunr.SortedSet=function(){this.length=0,this.elements=[]},lunr.SortedSet.load=function(e){var t=new this;return t.elements=e,t.length=e.length,t},lunr.SortedSet.prototype.add=function(){var e,t;for(e=0;e1;){if(r===e)return o;e>r&&(t=o),r>e&&(n=o),i=n-t,o=t+Math.floor(i/2),r=this.elements[o]}return r===e?o:-1},lunr.SortedSet.prototype.locationFor=function(e){for(var t=0,n=this.elements.length,i=n-t,o=t+Math.floor(i/2),r=this.elements[o];i>1;)e>r&&(t=o),r>e&&(n=o),i=n-t,o=t+Math.floor(i/2),r=this.elements[o];return r>e?o:e>r?o+1:void 0},lunr.SortedSet.prototype.intersect=function(e){for(var t=new lunr.SortedSet,n=0,i=0,o=this.length,r=e.length,s=this.elements,u=e.elements;;){if(n>o-1||i>r-1)break;s[n]!==u[i]?s[n]u[i]&&i++:(t.add(s[n]),n++,i++)}return t},lunr.SortedSet.prototype.clone=function(){var e=new lunr.SortedSet;return e.elements=this.toArray(),e.length=e.elements.length,e},lunr.SortedSet.prototype.union=function(e){var t,n,i;this.length>=e.length?(t=this,n=e):(t=e,n=this),i=t.clone();for(var o=0,r=n.toArray();oStyx\n\n

\n \n

\n\n

\"Build\"\n\"codecov\"\n\"Ruff\"\n\"stability-wip\"\n\"MIT\n\"pages\"

\n\n

Compile Python command line tool wrappers from Boutiques descriptors.

\n\n

Features

\n\n
    \n
  • Modern Python 3.11+ target
    • \n
  • Intellisense & full static type checking for inputs and outputs
    • \n
  • Documentation generation
    • \n
  • Custom execution environments via dependency injection
    • \n
  • Runtime input validation
    • \n
  • Unit & integration test generation
    • \n
\n\n

Boutiques descriptor implementation status: 77%

\n\n
    \n
  • Documentation
    • \n
  • Types (String, Numerical, File)
    • \n
  • Flags
    • \n
  • Lists
    • \n
  • Enums
    • \n
  • Constraints (Numeric ranges, Groups)
    • \n
  • (Conditional) outputs
    • \n
  • Static metadata (Hash, name, container environment)
    • \n
  • Tests
    • \n
\n"}, "styx.boutiques": {"fullname": "styx.boutiques", "modulename": "styx.boutiques", "kind": "module", "doc": "

Boutiques.

\n\n

model.py was created via the following command:

\n\n
datamodel-codegen     --input boutiques/tools/python/boutiques/schema/descriptor.schema.json     --input-file-type jsonschema     --output src/boutiques-codegen/model.py     --output-model-type pydantic_v2.BaseModel\n
\n"}, "styx.boutiques.model": {"fullname": "styx.boutiques.model", "modulename": "styx.boutiques.model", "kind": "module", "doc": "

\n"}, "styx.boutiques.model.Type": {"fullname": "styx.boutiques.model.Type", "modulename": "styx.boutiques.model", "qualname": "Type", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.Type.docker": {"fullname": "styx.boutiques.model.Type.docker", "modulename": "styx.boutiques.model", "qualname": "Type.docker", "kind": "variable", "doc": "

\n", "default_value": "<Type.docker: 'docker'>"}, "styx.boutiques.model.Type.singularity": {"fullname": "styx.boutiques.model.Type.singularity", "modulename": "styx.boutiques.model", "qualname": "Type.singularity", "kind": "variable", "doc": "

\n", "default_value": "<Type.singularity: 'singularity'>"}, "styx.boutiques.model.ContainerImageItem": {"fullname": "styx.boutiques.model.ContainerImageItem", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.ContainerImageItem.model_config": {"fullname": "styx.boutiques.model.ContainerImageItem.model_config", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.ContainerImageItem.type": {"fullname": "styx.boutiques.model.ContainerImageItem.type", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.type", "kind": "variable", "doc": "

\n", "annotation": ": styx.boutiques.model.Type"}, "styx.boutiques.model.ContainerImageItem.image": {"fullname": "styx.boutiques.model.ContainerImageItem.image", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.image", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"fullname": "styx.boutiques.model.ContainerImageItem.entrypoint", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.entrypoint", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.ContainerImageItem.index": {"fullname": "styx.boutiques.model.ContainerImageItem.index", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.index", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.ContainerImageItem.container_opts": {"fullname": "styx.boutiques.model.ContainerImageItem.container_opts", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.container_opts", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.ContainerImageItem.working_directory": {"fullname": "styx.boutiques.model.ContainerImageItem.working_directory", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.working_directory", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.ContainerImageItem.container_hash": {"fullname": "styx.boutiques.model.ContainerImageItem.container_hash", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.container_hash", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.ContainerImageItem.model_fields": {"fullname": "styx.boutiques.model.ContainerImageItem.model_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Type, required=True), 'image': FieldInfo(annotation=str, required=True, description='Name of an image where the tool is installed and configured. Example: bids/mriqc.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'entrypoint': FieldInfo(annotation=Union[bool, NoneType], required=False, description='Flag indicating whether or not the container uses an entrypoint.'), 'index': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='Optional index where the image is available, if not the standard location. Example: docker.io'), 'container_opts': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='container-opts', alias_priority=2, description='Container-level arguments for the application. Example: --privileged'), 'working_directory': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='working-directory', alias_priority=2), 'container_hash': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='container-hash', alias_priority=2)}"}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"fullname": "styx.boutiques.model.ContainerImageItem.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Type1": {"fullname": "styx.boutiques.model.Type1", "modulename": "styx.boutiques.model", "qualname": "Type1", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.Type1.rootfs": {"fullname": "styx.boutiques.model.Type1.rootfs", "modulename": "styx.boutiques.model", "qualname": "Type1.rootfs", "kind": "variable", "doc": "

\n", "default_value": "<Type1.rootfs: 'rootfs'>"}, "styx.boutiques.model.ContainerImageItem1": {"fullname": "styx.boutiques.model.ContainerImageItem1", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.ContainerImageItem1.model_config": {"fullname": "styx.boutiques.model.ContainerImageItem1.model_config", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.ContainerImageItem1.type": {"fullname": "styx.boutiques.model.ContainerImageItem1.type", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.type", "kind": "variable", "doc": "

\n", "annotation": ": styx.boutiques.model.Type1"}, "styx.boutiques.model.ContainerImageItem1.url": {"fullname": "styx.boutiques.model.ContainerImageItem1.url", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.url", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"fullname": "styx.boutiques.model.ContainerImageItem1.working_directory", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.working_directory", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"fullname": "styx.boutiques.model.ContainerImageItem1.container_hash", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.container_hash", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"fullname": "styx.boutiques.model.ContainerImageItem1.model_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Type1, required=True), 'url': FieldInfo(annotation=str, required=True, description='URL where the image is available.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'working_directory': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='working-directory', alias_priority=2), 'container_hash': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='container-hash', alias_priority=2)}"}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"fullname": "styx.boutiques.model.ContainerImageItem1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ContainerImage1": {"fullname": "styx.boutiques.model.ContainerImage1", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.ContainerImage1.working_directory": {"fullname": "styx.boutiques.model.ContainerImage1.working_directory", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1.working_directory", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.ContainerImage1.container_hash": {"fullname": "styx.boutiques.model.ContainerImage1.container_hash", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1.container_hash", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.ContainerImage1.model_config": {"fullname": "styx.boutiques.model.ContainerImage1.model_config", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ContainerImage1.model_fields": {"fullname": "styx.boutiques.model.ContainerImage1.model_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'working_directory': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='working-directory', alias_priority=2, description='Location from which this task must be launched within the container.'), 'container_hash': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='container-hash', alias_priority=2, description='Hash for the given container.')}"}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"fullname": "styx.boutiques.model.ContainerImage1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ContainerImage2": {"fullname": "styx.boutiques.model.ContainerImage2", "modulename": "styx.boutiques.model", "qualname": "ContainerImage2", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "ContainerImageItem, ContainerImage1"}, "styx.boutiques.model.ContainerImage2.model_config": {"fullname": "styx.boutiques.model.ContainerImage2.model_config", "modulename": "styx.boutiques.model", "qualname": "ContainerImage2.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.ContainerImage2.model_fields": {"fullname": "styx.boutiques.model.ContainerImage2.model_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage2.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'working_directory': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='working-directory', alias_priority=2), 'container_hash': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='container-hash', alias_priority=2), 'type': FieldInfo(annotation=Type, required=True), 'image': FieldInfo(annotation=str, required=True, description='Name of an image where the tool is installed and configured. Example: bids/mriqc.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'entrypoint': FieldInfo(annotation=Union[bool, NoneType], required=False, description='Flag indicating whether or not the container uses an entrypoint.'), 'index': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='Optional index where the image is available, if not the standard location. Example: docker.io'), 'container_opts': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='container-opts', alias_priority=2, description='Container-level arguments for the application. Example: --privileged')}"}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"fullname": "styx.boutiques.model.ContainerImage2.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage2.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ContainerImage3": {"fullname": "styx.boutiques.model.ContainerImage3", "modulename": "styx.boutiques.model", "qualname": "ContainerImage3", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "ContainerImageItem1, ContainerImage1"}, "styx.boutiques.model.ContainerImage3.model_config": {"fullname": "styx.boutiques.model.ContainerImage3.model_config", "modulename": "styx.boutiques.model", "qualname": "ContainerImage3.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.ContainerImage3.model_fields": {"fullname": "styx.boutiques.model.ContainerImage3.model_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage3.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'working_directory': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='working-directory', alias_priority=2), 'container_hash': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='container-hash', alias_priority=2), 'type': FieldInfo(annotation=Type1, required=True), 'url': FieldInfo(annotation=str, required=True, description='URL where the image is available.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)])}"}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"fullname": "styx.boutiques.model.ContainerImage3.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage3.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ContainerImage": {"fullname": "styx.boutiques.model.ContainerImage", "modulename": "styx.boutiques.model", "qualname": "ContainerImage", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/#rootmodel-and-custom-root-types

\n\n

A Pydantic BaseModel for the root object of the model.

\n\n
Attributes:
\n\n
    \n
  • root: The root object of the model.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_private__: Private fields in the model.
    • \n
  • __pydantic_extra__: Extra fields in the model.
    • \n
\n", "bases": "pydantic.main.BaseModel, typing.Generic[~RootModelRootType]"}, "styx.boutiques.model.ContainerImage.root": {"fullname": "styx.boutiques.model.ContainerImage.root", "modulename": "styx.boutiques.model", "qualname": "ContainerImage.root", "kind": "variable", "doc": "

\n", "annotation": ": Union[styx.boutiques.model.ContainerImage2, styx.boutiques.model.ContainerImage3]"}, "styx.boutiques.model.SchemaVersion": {"fullname": "styx.boutiques.model.SchemaVersion", "modulename": "styx.boutiques.model", "qualname": "SchemaVersion", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.SchemaVersion.field_0_5": {"fullname": "styx.boutiques.model.SchemaVersion.field_0_5", "modulename": "styx.boutiques.model", "qualname": "SchemaVersion.field_0_5", "kind": "variable", "doc": "

\n", "default_value": "<SchemaVersion.field_0_5: '0.5'>"}, "styx.boutiques.model.EnvironmentVariable": {"fullname": "styx.boutiques.model.EnvironmentVariable", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.EnvironmentVariable.model_config": {"fullname": "styx.boutiques.model.EnvironmentVariable.model_config", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.EnvironmentVariable.name": {"fullname": "styx.boutiques.model.EnvironmentVariable.name", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[a-z,A-Z][0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.EnvironmentVariable.value": {"fullname": "styx.boutiques.model.EnvironmentVariable.value", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.value", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.boutiques.model.EnvironmentVariable.description": {"fullname": "styx.boutiques.model.EnvironmentVariable.description", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"fullname": "styx.boutiques.model.EnvironmentVariable.model_fields", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'name': FieldInfo(annotation=str, required=True, description='The environment variable name (identifier) containing only alphanumeric characters and underscores. Example: "PROGRAM_PATH".', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[a-z,A-Z][0-9,_,a-z,A-Z]*$')]), 'value': FieldInfo(annotation=str, required=True, description='The value of the environment variable.'), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Description of the environment variable.')}"}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"fullname": "styx.boutiques.model.EnvironmentVariable.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Group": {"fullname": "styx.boutiques.model.Group", "modulename": "styx.boutiques.model", "qualname": "Group", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.Group.model_config": {"fullname": "styx.boutiques.model.Group.model_config", "modulename": "styx.boutiques.model", "qualname": "Group.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.Group.id": {"fullname": "styx.boutiques.model.Group.id", "modulename": "styx.boutiques.model", "qualname": "Group.id", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.Group.name": {"fullname": "styx.boutiques.model.Group.name", "modulename": "styx.boutiques.model", "qualname": "Group.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Group.description": {"fullname": "styx.boutiques.model.Group.description", "modulename": "styx.boutiques.model", "qualname": "Group.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Group.members": {"fullname": "styx.boutiques.model.Group.members", "modulename": "styx.boutiques.model", "qualname": "Group.members", "kind": "variable", "doc": "

\n", "annotation": ": List[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]]"}, "styx.boutiques.model.Group.mutually_exclusive": {"fullname": "styx.boutiques.model.Group.mutually_exclusive", "modulename": "styx.boutiques.model", "qualname": "Group.mutually_exclusive", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Group.one_is_required": {"fullname": "styx.boutiques.model.Group.one_is_required", "modulename": "styx.boutiques.model", "qualname": "Group.one_is_required", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Group.all_or_none": {"fullname": "styx.boutiques.model.Group.all_or_none", "modulename": "styx.boutiques.model", "qualname": "Group.all_or_none", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Group.model_fields": {"fullname": "styx.boutiques.model.Group.model_fields", "modulename": "styx.boutiques.model", "qualname": "Group.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'id': FieldInfo(annotation=str, required=True, description='A short, unique, informative identifier containing only alphanumeric characters and underscores. Typically used to generate variable names. Example: "outfile_group".', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]), 'name': FieldInfo(annotation=str, required=True, description='A human-readable name for the input group.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Description of the input group.'), 'members': FieldInfo(annotation=List[Annotated[str, StringConstraints]], required=True, description='IDs of the inputs belonging to this group.'), 'mutually_exclusive': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='mutually-exclusive', alias_priority=2, description='True if only one input in the group may be active at runtime.'), 'one_is_required': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='one-is-required', alias_priority=2, description='True if at least one of the inputs in the group must be active at runtime.'), 'all_or_none': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='all-or-none', alias_priority=2, description='True if members of the group need to be toggled together')}"}, "styx.boutiques.model.Group.model_computed_fields": {"fullname": "styx.boutiques.model.Group.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Group.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Type2": {"fullname": "styx.boutiques.model.Type2", "modulename": "styx.boutiques.model", "qualname": "Type2", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.Type2.Flag": {"fullname": "styx.boutiques.model.Type2.Flag", "modulename": "styx.boutiques.model", "qualname": "Type2.Flag", "kind": "variable", "doc": "

\n", "default_value": "<Type2.Flag: 'Flag'>"}, "styx.boutiques.model.ListModel": {"fullname": "styx.boutiques.model.ListModel", "modulename": "styx.boutiques.model", "qualname": "ListModel", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.ListModel.bool_False": {"fullname": "styx.boutiques.model.ListModel.bool_False", "modulename": "styx.boutiques.model", "qualname": "ListModel.bool_False", "kind": "variable", "doc": "

\n", "default_value": "<ListModel.bool_False: False>"}, "styx.boutiques.model.Input": {"fullname": "styx.boutiques.model.Input", "modulename": "styx.boutiques.model", "qualname": "Input", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.Input.type": {"fullname": "styx.boutiques.model.Input.type", "modulename": "styx.boutiques.model", "qualname": "Input.type", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.Type2]"}, "styx.boutiques.model.Input.list": {"fullname": "styx.boutiques.model.Input.list", "modulename": "styx.boutiques.model", "qualname": "Input.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.ListModel]"}, "styx.boutiques.model.Input.model_config": {"fullname": "styx.boutiques.model.Input.model_config", "modulename": "styx.boutiques.model", "qualname": "Input.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Input.model_fields": {"fullname": "styx.boutiques.model.Input.model_fields", "modulename": "styx.boutiques.model", "qualname": "Input.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Union[Type2, NoneType], required=False), 'list': FieldInfo(annotation=Union[ListModel, NoneType], required=False)}"}, "styx.boutiques.model.Input.model_computed_fields": {"fullname": "styx.boutiques.model.Input.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Input.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Type3": {"fullname": "styx.boutiques.model.Type3", "modulename": "styx.boutiques.model", "qualname": "Type3", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.Type3.String": {"fullname": "styx.boutiques.model.Type3.String", "modulename": "styx.boutiques.model", "qualname": "Type3.String", "kind": "variable", "doc": "

\n", "default_value": "<Type3.String: 'String'>"}, "styx.boutiques.model.Type3.File": {"fullname": "styx.boutiques.model.Type3.File", "modulename": "styx.boutiques.model", "qualname": "Type3.File", "kind": "variable", "doc": "

\n", "default_value": "<Type3.File: 'File'>"}, "styx.boutiques.model.Type3.Number": {"fullname": "styx.boutiques.model.Type3.Number", "modulename": "styx.boutiques.model", "qualname": "Type3.Number", "kind": "variable", "doc": "

\n", "default_value": "<Type3.Number: 'Number'>"}, "styx.boutiques.model.Input1": {"fullname": "styx.boutiques.model.Input1", "modulename": "styx.boutiques.model", "qualname": "Input1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.Input1.type": {"fullname": "styx.boutiques.model.Input1.type", "modulename": "styx.boutiques.model", "qualname": "Input1.type", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.Type3]"}, "styx.boutiques.model.Input1.model_config": {"fullname": "styx.boutiques.model.Input1.model_config", "modulename": "styx.boutiques.model", "qualname": "Input1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Input1.model_fields": {"fullname": "styx.boutiques.model.Input1.model_fields", "modulename": "styx.boutiques.model", "qualname": "Input1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Union[Type3, NoneType], required=False)}"}, "styx.boutiques.model.Input1.model_computed_fields": {"fullname": "styx.boutiques.model.Input1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Input1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Type4": {"fullname": "styx.boutiques.model.Type4", "modulename": "styx.boutiques.model", "qualname": "Type4", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.Type4.String": {"fullname": "styx.boutiques.model.Type4.String", "modulename": "styx.boutiques.model", "qualname": "Type4.String", "kind": "variable", "doc": "

\n", "default_value": "<Type4.String: 'String'>"}, "styx.boutiques.model.Type4.File": {"fullname": "styx.boutiques.model.Type4.File", "modulename": "styx.boutiques.model", "qualname": "Type4.File", "kind": "variable", "doc": "

\n", "default_value": "<Type4.File: 'File'>"}, "styx.boutiques.model.Type4.Flag": {"fullname": "styx.boutiques.model.Type4.Flag", "modulename": "styx.boutiques.model", "qualname": "Type4.Flag", "kind": "variable", "doc": "

\n", "default_value": "<Type4.Flag: 'Flag'>"}, "styx.boutiques.model.Type4.Number": {"fullname": "styx.boutiques.model.Type4.Number", "modulename": "styx.boutiques.model", "qualname": "Type4.Number", "kind": "variable", "doc": "

\n", "default_value": "<Type4.Number: 'Number'>"}, "styx.boutiques.model.Inputs": {"fullname": "styx.boutiques.model.Inputs", "modulename": "styx.boutiques.model", "qualname": "Inputs", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "Input"}, "styx.boutiques.model.Inputs.model_config": {"fullname": "styx.boutiques.model.Inputs.model_config", "modulename": "styx.boutiques.model", "qualname": "Inputs.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.Inputs.id": {"fullname": "styx.boutiques.model.Inputs.id", "modulename": "styx.boutiques.model", "qualname": "Inputs.id", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.Inputs.name": {"fullname": "styx.boutiques.model.Inputs.name", "modulename": "styx.boutiques.model", "qualname": "Inputs.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Inputs.type": {"fullname": "styx.boutiques.model.Inputs.type", "modulename": "styx.boutiques.model", "qualname": "Inputs.type", "kind": "variable", "doc": "

\n", "annotation": ": styx.boutiques.model.Type4"}, "styx.boutiques.model.Inputs.description": {"fullname": "styx.boutiques.model.Inputs.description", "modulename": "styx.boutiques.model", "qualname": "Inputs.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs.value_key": {"fullname": "styx.boutiques.model.Inputs.value_key", "modulename": "styx.boutiques.model", "qualname": "Inputs.value_key", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs.list": {"fullname": "styx.boutiques.model.Inputs.list", "modulename": "styx.boutiques.model", "qualname": "Inputs.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.list_separator": {"fullname": "styx.boutiques.model.Inputs.list_separator", "modulename": "styx.boutiques.model", "qualname": "Inputs.list_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs.optional": {"fullname": "styx.boutiques.model.Inputs.optional", "modulename": "styx.boutiques.model", "qualname": "Inputs.optional", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.command_line_flag": {"fullname": "styx.boutiques.model.Inputs.command_line_flag", "modulename": "styx.boutiques.model", "qualname": "Inputs.command_line_flag", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs.requires_inputs": {"fullname": "styx.boutiques.model.Inputs.requires_inputs", "modulename": "styx.boutiques.model", "qualname": "Inputs.requires_inputs", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.Inputs.disables_inputs": {"fullname": "styx.boutiques.model.Inputs.disables_inputs", "modulename": "styx.boutiques.model", "qualname": "Inputs.disables_inputs", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"fullname": "styx.boutiques.model.Inputs.command_line_flag_separator", "modulename": "styx.boutiques.model", "qualname": "Inputs.command_line_flag_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs.default_value": {"fullname": "styx.boutiques.model.Inputs.default_value", "modulename": "styx.boutiques.model", "qualname": "Inputs.default_value", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.Inputs.value_choices": {"fullname": "styx.boutiques.model.Inputs.value_choices", "modulename": "styx.boutiques.model", "qualname": "Inputs.value_choices", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[Union[str, float]]]"}, "styx.boutiques.model.Inputs.value_requires": {"fullname": "styx.boutiques.model.Inputs.value_requires", "modulename": "styx.boutiques.model", "qualname": "Inputs.value_requires", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Inputs.value_disables": {"fullname": "styx.boutiques.model.Inputs.value_disables", "modulename": "styx.boutiques.model", "qualname": "Inputs.value_disables", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Inputs.integer": {"fullname": "styx.boutiques.model.Inputs.integer", "modulename": "styx.boutiques.model", "qualname": "Inputs.integer", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.minimum": {"fullname": "styx.boutiques.model.Inputs.minimum", "modulename": "styx.boutiques.model", "qualname": "Inputs.minimum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs.maximum": {"fullname": "styx.boutiques.model.Inputs.maximum", "modulename": "styx.boutiques.model", "qualname": "Inputs.maximum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs.exclusive_minimum": {"fullname": "styx.boutiques.model.Inputs.exclusive_minimum", "modulename": "styx.boutiques.model", "qualname": "Inputs.exclusive_minimum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.exclusive_maximum": {"fullname": "styx.boutiques.model.Inputs.exclusive_maximum", "modulename": "styx.boutiques.model", "qualname": "Inputs.exclusive_maximum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.min_list_entries": {"fullname": "styx.boutiques.model.Inputs.min_list_entries", "modulename": "styx.boutiques.model", "qualname": "Inputs.min_list_entries", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs.max_list_entries": {"fullname": "styx.boutiques.model.Inputs.max_list_entries", "modulename": "styx.boutiques.model", "qualname": "Inputs.max_list_entries", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs.uses_absolute_path": {"fullname": "styx.boutiques.model.Inputs.uses_absolute_path", "modulename": "styx.boutiques.model", "qualname": "Inputs.uses_absolute_path", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.model_fields": {"fullname": "styx.boutiques.model.Inputs.model_fields", "modulename": "styx.boutiques.model", "qualname": "Inputs.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Type4, required=True, description='Input type.'), 'list': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if input is a list of value. An input of type "Flag" cannot be a list.'), 'id': FieldInfo(annotation=str, required=True, description='A short, unique, informative identifier containing only alphanumeric characters and underscores. Typically used to generate variable names. Example: "data_file".', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]), 'name': FieldInfo(annotation=str, required=True, description="A human-readable input name. Example: 'Data file'.", metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Input description.'), 'value_key': FieldInfo(annotation=Union[str, NoneType], required=False, alias='value-key', alias_priority=2, description='A string contained in command-line, substituted by the input value and/or flag at runtime.'), 'list_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='list-separator', alias_priority=2, description='Separator used between list items. Defaults to a single space.'), 'optional': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if input is optional.'), 'command_line_flag': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag', alias_priority=2, description='Option flag of the input, involved in the value-key substitution. Inputs of type "Flag" have to have a command-line flag. Examples: -v, --force.'), 'requires_inputs': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='requires-inputs', alias_priority=2, description='Ids of the inputs or ids of groups whose members must be active for this input to be available.'), 'disables_inputs': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='disables-inputs', alias_priority=2, description='Ids of the inputs that are disabled when this input is active.'), 'command_line_flag_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag-separator', alias_priority=2, description='Separator used between flags and their arguments. Defaults to a single space.'), 'default_value': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='default-value', alias_priority=2, description='Default value of the input. The default value is set when no value is specified, even when the input is optional. If the desired behavior is to omit the input from the command line when no value is specified, then no default value should be used. In this case, the tool might still use a default value internally, but this will remain undocumented in the Boutiques interface.'), 'value_choices': FieldInfo(annotation=Union[List[Union[str, float]], NoneType], required=False, alias='value-choices', alias_priority=2, description='Permitted choices for input value. May not be used with the Flag type.'), 'value_requires': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False, alias='value-requires', alias_priority=2, description='Ids of the inputs that are required when the corresponding value choice is selected.'), 'value_disables': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False, alias='value-disables', alias_priority=2, description='Ids of the inputs that are disabled when the corresponding value choice is selected.'), 'integer': FieldInfo(annotation=Union[bool, NoneType], required=False, description='Specify whether the input should be an integer. May only be used with Number type inputs.'), 'minimum': FieldInfo(annotation=Union[float, NoneType], required=False, description='Specify the minimum value of the input (inclusive). May only be used with Number type inputs.'), 'maximum': FieldInfo(annotation=Union[float, NoneType], required=False, description='Specify the maximum value of the input (inclusive). May only be used with Number type inputs.'), 'exclusive_minimum': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='exclusive-minimum', alias_priority=2, description='Specify whether the minimum is exclusive or not. May only be used with Number type inputs.'), 'exclusive_maximum': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='exclusive-maximum', alias_priority=2, description='Specify whether the maximum is exclusive or not. May only be used with Number type inputs.'), 'min_list_entries': FieldInfo(annotation=Union[float, NoneType], required=False, alias='min-list-entries', alias_priority=2, description='Specify the minimum number of entries in the list. May only be used with List type inputs.'), 'max_list_entries': FieldInfo(annotation=Union[float, NoneType], required=False, alias='max-list-entries', alias_priority=2, description='Specify the maximum number of entries in the list. May only be used with List type inputs.'), 'uses_absolute_path': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='uses-absolute-path', alias_priority=2, description='Specifies that this input must be given as an absolute path. Only specifiable for File type inputs.')}"}, "styx.boutiques.model.Inputs.model_computed_fields": {"fullname": "styx.boutiques.model.Inputs.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Inputs.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Inputs1": {"fullname": "styx.boutiques.model.Inputs1", "modulename": "styx.boutiques.model", "qualname": "Inputs1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "Input1"}, "styx.boutiques.model.Inputs1.model_config": {"fullname": "styx.boutiques.model.Inputs1.model_config", "modulename": "styx.boutiques.model", "qualname": "Inputs1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.Inputs1.id": {"fullname": "styx.boutiques.model.Inputs1.id", "modulename": "styx.boutiques.model", "qualname": "Inputs1.id", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.Inputs1.name": {"fullname": "styx.boutiques.model.Inputs1.name", "modulename": "styx.boutiques.model", "qualname": "Inputs1.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Inputs1.type": {"fullname": "styx.boutiques.model.Inputs1.type", "modulename": "styx.boutiques.model", "qualname": "Inputs1.type", "kind": "variable", "doc": "

\n", "annotation": ": styx.boutiques.model.Type4"}, "styx.boutiques.model.Inputs1.description": {"fullname": "styx.boutiques.model.Inputs1.description", "modulename": "styx.boutiques.model", "qualname": "Inputs1.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs1.value_key": {"fullname": "styx.boutiques.model.Inputs1.value_key", "modulename": "styx.boutiques.model", "qualname": "Inputs1.value_key", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs1.list": {"fullname": "styx.boutiques.model.Inputs1.list", "modulename": "styx.boutiques.model", "qualname": "Inputs1.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.list_separator": {"fullname": "styx.boutiques.model.Inputs1.list_separator", "modulename": "styx.boutiques.model", "qualname": "Inputs1.list_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs1.optional": {"fullname": "styx.boutiques.model.Inputs1.optional", "modulename": "styx.boutiques.model", "qualname": "Inputs1.optional", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.command_line_flag": {"fullname": "styx.boutiques.model.Inputs1.command_line_flag", "modulename": "styx.boutiques.model", "qualname": "Inputs1.command_line_flag", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs1.requires_inputs": {"fullname": "styx.boutiques.model.Inputs1.requires_inputs", "modulename": "styx.boutiques.model", "qualname": "Inputs1.requires_inputs", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.Inputs1.disables_inputs": {"fullname": "styx.boutiques.model.Inputs1.disables_inputs", "modulename": "styx.boutiques.model", "qualname": "Inputs1.disables_inputs", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"fullname": "styx.boutiques.model.Inputs1.command_line_flag_separator", "modulename": "styx.boutiques.model", "qualname": "Inputs1.command_line_flag_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs1.default_value": {"fullname": "styx.boutiques.model.Inputs1.default_value", "modulename": "styx.boutiques.model", "qualname": "Inputs1.default_value", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.Inputs1.value_choices": {"fullname": "styx.boutiques.model.Inputs1.value_choices", "modulename": "styx.boutiques.model", "qualname": "Inputs1.value_choices", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[Union[str, float]]]"}, "styx.boutiques.model.Inputs1.value_requires": {"fullname": "styx.boutiques.model.Inputs1.value_requires", "modulename": "styx.boutiques.model", "qualname": "Inputs1.value_requires", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Inputs1.value_disables": {"fullname": "styx.boutiques.model.Inputs1.value_disables", "modulename": "styx.boutiques.model", "qualname": "Inputs1.value_disables", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Inputs1.integer": {"fullname": "styx.boutiques.model.Inputs1.integer", "modulename": "styx.boutiques.model", "qualname": "Inputs1.integer", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.minimum": {"fullname": "styx.boutiques.model.Inputs1.minimum", "modulename": "styx.boutiques.model", "qualname": "Inputs1.minimum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs1.maximum": {"fullname": "styx.boutiques.model.Inputs1.maximum", "modulename": "styx.boutiques.model", "qualname": "Inputs1.maximum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"fullname": "styx.boutiques.model.Inputs1.exclusive_minimum", "modulename": "styx.boutiques.model", "qualname": "Inputs1.exclusive_minimum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"fullname": "styx.boutiques.model.Inputs1.exclusive_maximum", "modulename": "styx.boutiques.model", "qualname": "Inputs1.exclusive_maximum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.min_list_entries": {"fullname": "styx.boutiques.model.Inputs1.min_list_entries", "modulename": "styx.boutiques.model", "qualname": "Inputs1.min_list_entries", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs1.max_list_entries": {"fullname": "styx.boutiques.model.Inputs1.max_list_entries", "modulename": "styx.boutiques.model", "qualname": "Inputs1.max_list_entries", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"fullname": "styx.boutiques.model.Inputs1.uses_absolute_path", "modulename": "styx.boutiques.model", "qualname": "Inputs1.uses_absolute_path", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.model_fields": {"fullname": "styx.boutiques.model.Inputs1.model_fields", "modulename": "styx.boutiques.model", "qualname": "Inputs1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Type4, required=True, description='Input type.'), 'id': FieldInfo(annotation=str, required=True, description='A short, unique, informative identifier containing only alphanumeric characters and underscores. Typically used to generate variable names. Example: "data_file".', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]), 'name': FieldInfo(annotation=str, required=True, description="A human-readable input name. Example: 'Data file'.", metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Input description.'), 'value_key': FieldInfo(annotation=Union[str, NoneType], required=False, alias='value-key', alias_priority=2, description='A string contained in command-line, substituted by the input value and/or flag at runtime.'), 'list': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if input is a list of value. An input of type "Flag" cannot be a list.'), 'list_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='list-separator', alias_priority=2, description='Separator used between list items. Defaults to a single space.'), 'optional': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if input is optional.'), 'command_line_flag': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag', alias_priority=2, description='Option flag of the input, involved in the value-key substitution. Inputs of type "Flag" have to have a command-line flag. Examples: -v, --force.'), 'requires_inputs': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='requires-inputs', alias_priority=2, description='Ids of the inputs or ids of groups whose members must be active for this input to be available.'), 'disables_inputs': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='disables-inputs', alias_priority=2, description='Ids of the inputs that are disabled when this input is active.'), 'command_line_flag_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag-separator', alias_priority=2, description='Separator used between flags and their arguments. Defaults to a single space.'), 'default_value': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='default-value', alias_priority=2, description='Default value of the input. The default value is set when no value is specified, even when the input is optional. If the desired behavior is to omit the input from the command line when no value is specified, then no default value should be used. In this case, the tool might still use a default value internally, but this will remain undocumented in the Boutiques interface.'), 'value_choices': FieldInfo(annotation=Union[List[Union[str, float]], NoneType], required=False, alias='value-choices', alias_priority=2, description='Permitted choices for input value. May not be used with the Flag type.'), 'value_requires': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False, alias='value-requires', alias_priority=2, description='Ids of the inputs that are required when the corresponding value choice is selected.'), 'value_disables': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False, alias='value-disables', alias_priority=2, description='Ids of the inputs that are disabled when the corresponding value choice is selected.'), 'integer': FieldInfo(annotation=Union[bool, NoneType], required=False, description='Specify whether the input should be an integer. May only be used with Number type inputs.'), 'minimum': FieldInfo(annotation=Union[float, NoneType], required=False, description='Specify the minimum value of the input (inclusive). May only be used with Number type inputs.'), 'maximum': FieldInfo(annotation=Union[float, NoneType], required=False, description='Specify the maximum value of the input (inclusive). May only be used with Number type inputs.'), 'exclusive_minimum': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='exclusive-minimum', alias_priority=2, description='Specify whether the minimum is exclusive or not. May only be used with Number type inputs.'), 'exclusive_maximum': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='exclusive-maximum', alias_priority=2, description='Specify whether the maximum is exclusive or not. May only be used with Number type inputs.'), 'min_list_entries': FieldInfo(annotation=Union[float, NoneType], required=False, alias='min-list-entries', alias_priority=2, description='Specify the minimum number of entries in the list. May only be used with List type inputs.'), 'max_list_entries': FieldInfo(annotation=Union[float, NoneType], required=False, alias='max-list-entries', alias_priority=2, description='Specify the maximum number of entries in the list. May only be used with List type inputs.'), 'uses_absolute_path': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='uses-absolute-path', alias_priority=2, description='Specifies that this input must be given as an absolute path. Only specifiable for File type inputs.')}"}, "styx.boutiques.model.Inputs1.model_computed_fields": {"fullname": "styx.boutiques.model.Inputs1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Inputs1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Test": {"fullname": "styx.boutiques.model.Test", "modulename": "styx.boutiques.model", "qualname": "Test", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.Test.name": {"fullname": "styx.boutiques.model.Test.name", "modulename": "styx.boutiques.model", "qualname": "Test.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Test.invocation": {"fullname": "styx.boutiques.model.Test.invocation", "modulename": "styx.boutiques.model", "qualname": "Test.invocation", "kind": "variable", "doc": "

\n", "annotation": ": Dict[str, Any]"}, "styx.boutiques.model.Test.model_config": {"fullname": "styx.boutiques.model.Test.model_config", "modulename": "styx.boutiques.model", "qualname": "Test.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Test.model_fields": {"fullname": "styx.boutiques.model.Test.model_fields", "modulename": "styx.boutiques.model", "qualname": "Test.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'name': FieldInfo(annotation=str, required=True, description='Name of the test-case', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'invocation': FieldInfo(annotation=Dict[str, Any], required=True)}"}, "styx.boutiques.model.Test.model_computed_fields": {"fullname": "styx.boutiques.model.Test.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Test.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.OutputFile": {"fullname": "styx.boutiques.model.OutputFile", "modulename": "styx.boutiques.model", "qualname": "OutputFile", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.OutputFile.file_template": {"fullname": "styx.boutiques.model.OutputFile.file_template", "modulename": "styx.boutiques.model", "qualname": "OutputFile.file_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.OutputFile.list": {"fullname": "styx.boutiques.model.OutputFile.list", "modulename": "styx.boutiques.model", "qualname": "OutputFile.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.ListModel]"}, "styx.boutiques.model.OutputFile.model_config": {"fullname": "styx.boutiques.model.OutputFile.model_config", "modulename": "styx.boutiques.model", "qualname": "OutputFile.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.OutputFile.model_fields": {"fullname": "styx.boutiques.model.OutputFile.model_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFile.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'file_template': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='file-template', alias_priority=2, metadata=[MinLen(min_length=1)]), 'list': FieldInfo(annotation=Union[ListModel, NoneType], required=False)}"}, "styx.boutiques.model.OutputFile.model_computed_fields": {"fullname": "styx.boutiques.model.OutputFile.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFile.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.FileTemplate": {"fullname": "styx.boutiques.model.FileTemplate", "modulename": "styx.boutiques.model", "qualname": "FileTemplate", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.FileTemplate.bool_False": {"fullname": "styx.boutiques.model.FileTemplate.bool_False", "modulename": "styx.boutiques.model", "qualname": "FileTemplate.bool_False", "kind": "variable", "doc": "

\n", "default_value": "<FileTemplate.bool_False: False>"}, "styx.boutiques.model.OutputFile1": {"fullname": "styx.boutiques.model.OutputFile1", "modulename": "styx.boutiques.model", "qualname": "OutputFile1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.OutputFile1.file_template": {"fullname": "styx.boutiques.model.OutputFile1.file_template", "modulename": "styx.boutiques.model", "qualname": "OutputFile1.file_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.FileTemplate]"}, "styx.boutiques.model.OutputFile1.model_config": {"fullname": "styx.boutiques.model.OutputFile1.model_config", "modulename": "styx.boutiques.model", "qualname": "OutputFile1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.OutputFile1.model_fields": {"fullname": "styx.boutiques.model.OutputFile1.model_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFile1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'file_template': FieldInfo(annotation=Union[FileTemplate, NoneType], required=False, alias='file-template', alias_priority=2)}"}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"fullname": "styx.boutiques.model.OutputFile1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFile1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ConditionalPathTemplateItem": {"fullname": "styx.boutiques.model.ConditionalPathTemplateItem", "modulename": "styx.boutiques.model", "qualname": "ConditionalPathTemplateItem", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"fullname": "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames", "modulename": "styx.boutiques.model", "qualname": "ConditionalPathTemplateItem.propertyNames", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"fullname": "styx.boutiques.model.ConditionalPathTemplateItem.model_config", "modulename": "styx.boutiques.model", "qualname": "ConditionalPathTemplateItem.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"fullname": "styx.boutiques.model.ConditionalPathTemplateItem.model_fields", "modulename": "styx.boutiques.model", "qualname": "ConditionalPathTemplateItem.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'propertyNames': FieldInfo(annotation=Union[Any, NoneType], required=False)}"}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"fullname": "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ConditionalPathTemplateItem.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.OutputFiles": {"fullname": "styx.boutiques.model.OutputFiles", "modulename": "styx.boutiques.model", "qualname": "OutputFiles", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "OutputFile"}, "styx.boutiques.model.OutputFiles.model_config": {"fullname": "styx.boutiques.model.OutputFiles.model_config", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.OutputFiles.id": {"fullname": "styx.boutiques.model.OutputFiles.id", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.id", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.OutputFiles.name": {"fullname": "styx.boutiques.model.OutputFiles.name", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.OutputFiles.description": {"fullname": "styx.boutiques.model.OutputFiles.description", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles.value_key": {"fullname": "styx.boutiques.model.OutputFiles.value_key", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.value_key", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles.path_template": {"fullname": "styx.boutiques.model.OutputFiles.path_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.path_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"fullname": "styx.boutiques.model.OutputFiles.conditional_path_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.conditional_path_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.ConditionalPathTemplateItem]]"}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"fullname": "styx.boutiques.model.OutputFiles.path_template_stripped_extensions", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.path_template_stripped_extensions", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.OutputFiles.list": {"fullname": "styx.boutiques.model.OutputFiles.list", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles.optional": {"fullname": "styx.boutiques.model.OutputFiles.optional", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.optional", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles.command_line_flag": {"fullname": "styx.boutiques.model.OutputFiles.command_line_flag", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.command_line_flag", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"fullname": "styx.boutiques.model.OutputFiles.command_line_flag_separator", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.command_line_flag_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"fullname": "styx.boutiques.model.OutputFiles.uses_absolute_path", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.uses_absolute_path", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles.file_template": {"fullname": "styx.boutiques.model.OutputFiles.file_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.file_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.OutputFiles.model_fields": {"fullname": "styx.boutiques.model.OutputFiles.model_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'file_template': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='file-template', alias_priority=2, description='An array of strings that may contain value keys. Each item will be a line in the configuration file.', metadata=[MinLen(min_length=1)]), 'list': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if output is a list of value.'), 'id': FieldInfo(annotation=str, required=True, description='A short, unique, informative identifier containing only alphanumeric characters and underscores. Typically used to generate variable names. Example: "data_file"', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]), 'name': FieldInfo(annotation=str, required=True, description="A human-readable output name. Example: 'Data file'", metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Output description.'), 'value_key': FieldInfo(annotation=Union[str, NoneType], required=False, alias='value-key', alias_priority=2, description='A string contained in command-line, substituted by the output value and/or flag at runtime.'), 'path_template': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='path-template', alias_priority=2, description='Describes the output file path relatively to the execution directory. May contain input value keys and wildcards. Example: "results/[INPUT1]_brain*.mnc".'), 'conditional_path_template': FieldInfo(annotation=Union[List[ConditionalPathTemplateItem], NoneType], required=False, alias='conditional-path-template', alias_priority=2, description='List of objects containing boolean statement (Limited python syntax: ==, !=, <, >, <=, >=, and, or) and output file paths relative to the execution directory, assign path of first true boolean statement. May contain input value keys, "default" object required if "optional" set to True . Example list: "[{"[PARAM1] > 8": "outputs/[INPUT1].txt"}, {"default": "outputs/default.txt"}]".', metadata=[MinLen(min_length=1)]), 'path_template_stripped_extensions': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='path-template-stripped-extensions', alias_priority=2, description='List of file extensions that will be stripped from the input values before being substituted in the path template. Example: [".nii",".nii.gz"].'), 'optional': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if output may not be produced by the tool.'), 'command_line_flag': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag', alias_priority=2, description='Option flag of the output, involved in the value-key substitution. Examples: -o, --output'), 'command_line_flag_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag-separator', alias_priority=2, description='Separator used between flags and their arguments. Defaults to a single space.'), 'uses_absolute_path': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='uses-absolute-path', alias_priority=2, description='Specifies that this output filepath will be given as an absolute path.')}"}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"fullname": "styx.boutiques.model.OutputFiles.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.OutputFiles1": {"fullname": "styx.boutiques.model.OutputFiles1", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "OutputFile1"}, "styx.boutiques.model.OutputFiles1.model_config": {"fullname": "styx.boutiques.model.OutputFiles1.model_config", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.OutputFiles1.id": {"fullname": "styx.boutiques.model.OutputFiles1.id", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.id", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.OutputFiles1.name": {"fullname": "styx.boutiques.model.OutputFiles1.name", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.OutputFiles1.description": {"fullname": "styx.boutiques.model.OutputFiles1.description", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles1.value_key": {"fullname": "styx.boutiques.model.OutputFiles1.value_key", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.value_key", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles1.path_template": {"fullname": "styx.boutiques.model.OutputFiles1.path_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.path_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"fullname": "styx.boutiques.model.OutputFiles1.conditional_path_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.conditional_path_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.ConditionalPathTemplateItem]]"}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"fullname": "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.path_template_stripped_extensions", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.OutputFiles1.list": {"fullname": "styx.boutiques.model.OutputFiles1.list", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles1.optional": {"fullname": "styx.boutiques.model.OutputFiles1.optional", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.optional", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"fullname": "styx.boutiques.model.OutputFiles1.command_line_flag", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.command_line_flag", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"fullname": "styx.boutiques.model.OutputFiles1.command_line_flag_separator", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.command_line_flag_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"fullname": "styx.boutiques.model.OutputFiles1.uses_absolute_path", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.uses_absolute_path", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles1.file_template": {"fullname": "styx.boutiques.model.OutputFiles1.file_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.file_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.OutputFiles1.model_fields": {"fullname": "styx.boutiques.model.OutputFiles1.model_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'file_template': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='file-template', alias_priority=2, description='An array of strings that may contain value keys. Each item will be a line in the configuration file.', metadata=[MinLen(min_length=1)]), 'id': FieldInfo(annotation=str, required=True, description='A short, unique, informative identifier containing only alphanumeric characters and underscores. Typically used to generate variable names. Example: "data_file"', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]), 'name': FieldInfo(annotation=str, required=True, description="A human-readable output name. Example: 'Data file'", metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Output description.'), 'value_key': FieldInfo(annotation=Union[str, NoneType], required=False, alias='value-key', alias_priority=2, description='A string contained in command-line, substituted by the output value and/or flag at runtime.'), 'path_template': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='path-template', alias_priority=2, description='Describes the output file path relatively to the execution directory. May contain input value keys and wildcards. Example: "results/[INPUT1]_brain*.mnc".'), 'conditional_path_template': FieldInfo(annotation=Union[List[ConditionalPathTemplateItem], NoneType], required=False, alias='conditional-path-template', alias_priority=2, description='List of objects containing boolean statement (Limited python syntax: ==, !=, <, >, <=, >=, and, or) and output file paths relative to the execution directory, assign path of first true boolean statement. May contain input value keys, "default" object required if "optional" set to True . Example list: "[{"[PARAM1] > 8": "outputs/[INPUT1].txt"}, {"default": "outputs/default.txt"}]".', metadata=[MinLen(min_length=1)]), 'path_template_stripped_extensions': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='path-template-stripped-extensions', alias_priority=2, description='List of file extensions that will be stripped from the input values before being substituted in the path template. Example: [".nii",".nii.gz"].'), 'list': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if output is a list of value.'), 'optional': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if output may not be produced by the tool.'), 'command_line_flag': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag', alias_priority=2, description='Option flag of the output, involved in the value-key substitution. Examples: -o, --output'), 'command_line_flag_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag-separator', alias_priority=2, description='Separator used between flags and their arguments. Defaults to a single space.'), 'uses_absolute_path': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='uses-absolute-path', alias_priority=2, description='Specifies that this output filepath will be given as an absolute path.')}"}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"fullname": "styx.boutiques.model.OutputFiles1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.SuggestedResources": {"fullname": "styx.boutiques.model.SuggestedResources", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"fullname": "styx.boutiques.model.SuggestedResources.cpu_cores", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.cpu_cores", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[int, None, Interval(gt=None, ge=1, lt=None, le=None), None]]"}, "styx.boutiques.model.SuggestedResources.ram": {"fullname": "styx.boutiques.model.SuggestedResources.ram", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.ram", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[float, None, Interval(gt=None, ge=0.0, lt=None, le=None), None, None]]"}, "styx.boutiques.model.SuggestedResources.disk_space": {"fullname": "styx.boutiques.model.SuggestedResources.disk_space", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.disk_space", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[float, None, Interval(gt=None, ge=0.0, lt=None, le=None), None, None]]"}, "styx.boutiques.model.SuggestedResources.nodes": {"fullname": "styx.boutiques.model.SuggestedResources.nodes", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.nodes", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[int, None, Interval(gt=None, ge=1, lt=None, le=None), None]]"}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"fullname": "styx.boutiques.model.SuggestedResources.walltime_estimate", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.walltime_estimate", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[float, None, Interval(gt=None, ge=0.0, lt=None, le=None), None, None]]"}, "styx.boutiques.model.SuggestedResources.model_config": {"fullname": "styx.boutiques.model.SuggestedResources.model_config", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.SuggestedResources.model_fields": {"fullname": "styx.boutiques.model.SuggestedResources.model_fields", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'cpu_cores': FieldInfo(annotation=Union[Annotated[int, NoneType, Interval, NoneType], NoneType], required=False, alias='cpu-cores', alias_priority=2, description='The requested number of cpu cores to run the described application'), 'ram': FieldInfo(annotation=Union[Annotated[float, NoneType, Interval, NoneType, NoneType], NoneType], required=False, description='The requested number of GB RAM to run the described application'), 'disk_space': FieldInfo(annotation=Union[Annotated[float, NoneType, Interval, NoneType, NoneType], NoneType], required=False, alias='disk-space', alias_priority=2, description='The requested number of GB of storage to run the described application'), 'nodes': FieldInfo(annotation=Union[Annotated[int, NoneType, Interval, NoneType], NoneType], required=False, description='The requested number of nodes to spread the described application across'), 'walltime_estimate': FieldInfo(annotation=Union[Annotated[float, NoneType, Interval, NoneType, NoneType], NoneType], required=False, alias='walltime-estimate', alias_priority=2, description='Estimated wall time of a task in seconds.')}"}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"fullname": "styx.boutiques.model.SuggestedResources.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ErrorCode": {"fullname": "styx.boutiques.model.ErrorCode", "modulename": "styx.boutiques.model", "qualname": "ErrorCode", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.ErrorCode.model_config": {"fullname": "styx.boutiques.model.ErrorCode.model_config", "modulename": "styx.boutiques.model", "qualname": "ErrorCode.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.ErrorCode.code": {"fullname": "styx.boutiques.model.ErrorCode.code", "modulename": "styx.boutiques.model", "qualname": "ErrorCode.code", "kind": "variable", "doc": "

\n", "annotation": ": int"}, "styx.boutiques.model.ErrorCode.description": {"fullname": "styx.boutiques.model.ErrorCode.description", "modulename": "styx.boutiques.model", "qualname": "ErrorCode.description", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.boutiques.model.ErrorCode.model_fields": {"fullname": "styx.boutiques.model.ErrorCode.model_fields", "modulename": "styx.boutiques.model", "qualname": "ErrorCode.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'code': FieldInfo(annotation=int, required=True, description='Value of the exit code'), 'description': FieldInfo(annotation=str, required=True, description='Description of the error code.')}"}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"fullname": "styx.boutiques.model.ErrorCode.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ErrorCode.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Tool": {"fullname": "styx.boutiques.model.Tool", "modulename": "styx.boutiques.model", "qualname": "Tool", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.Tool.model_config": {"fullname": "styx.boutiques.model.Tool.model_config", "modulename": "styx.boutiques.model", "qualname": "Tool.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.Tool.name": {"fullname": "styx.boutiques.model.Tool.name", "modulename": "styx.boutiques.model", "qualname": "Tool.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Tool.tool_version": {"fullname": "styx.boutiques.model.Tool.tool_version", "modulename": "styx.boutiques.model", "qualname": "Tool.tool_version", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Tool.description": {"fullname": "styx.boutiques.model.Tool.description", "modulename": "styx.boutiques.model", "qualname": "Tool.description", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Tool.deprecated_by_doi": {"fullname": "styx.boutiques.model.Tool.deprecated_by_doi", "modulename": "styx.boutiques.model", "qualname": "Tool.deprecated_by_doi", "kind": "variable", "doc": "

\n", "annotation": ": Union[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)], bool, NoneType]"}, "styx.boutiques.model.Tool.author": {"fullname": "styx.boutiques.model.Tool.author", "modulename": "styx.boutiques.model", "qualname": "Tool.author", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.url": {"fullname": "styx.boutiques.model.Tool.url", "modulename": "styx.boutiques.model", "qualname": "Tool.url", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.descriptor_url": {"fullname": "styx.boutiques.model.Tool.descriptor_url", "modulename": "styx.boutiques.model", "qualname": "Tool.descriptor_url", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.doi": {"fullname": "styx.boutiques.model.Tool.doi", "modulename": "styx.boutiques.model", "qualname": "Tool.doi", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.shell": {"fullname": "styx.boutiques.model.Tool.shell", "modulename": "styx.boutiques.model", "qualname": "Tool.shell", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.tool_doi": {"fullname": "styx.boutiques.model.Tool.tool_doi", "modulename": "styx.boutiques.model", "qualname": "Tool.tool_doi", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.command_line": {"fullname": "styx.boutiques.model.Tool.command_line", "modulename": "styx.boutiques.model", "qualname": "Tool.command_line", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Tool.container_image": {"fullname": "styx.boutiques.model.Tool.container_image", "modulename": "styx.boutiques.model", "qualname": "Tool.container_image", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.ContainerImage]"}, "styx.boutiques.model.Tool.schema_version": {"fullname": "styx.boutiques.model.Tool.schema_version", "modulename": "styx.boutiques.model", "qualname": "Tool.schema_version", "kind": "variable", "doc": "

\n", "annotation": ": styx.boutiques.model.SchemaVersion"}, "styx.boutiques.model.Tool.environment_variables": {"fullname": "styx.boutiques.model.Tool.environment_variables", "modulename": "styx.boutiques.model", "qualname": "Tool.environment_variables", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.EnvironmentVariable]]"}, "styx.boutiques.model.Tool.groups": {"fullname": "styx.boutiques.model.Tool.groups", "modulename": "styx.boutiques.model", "qualname": "Tool.groups", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.Group]]"}, "styx.boutiques.model.Tool.inputs": {"fullname": "styx.boutiques.model.Tool.inputs", "modulename": "styx.boutiques.model", "qualname": "Tool.inputs", "kind": "variable", "doc": "

\n", "annotation": ": List[Union[styx.boutiques.model.Inputs, styx.boutiques.model.Inputs1]]"}, "styx.boutiques.model.Tool.tests": {"fullname": "styx.boutiques.model.Tool.tests", "modulename": "styx.boutiques.model", "qualname": "Tool.tests", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.Test]]"}, "styx.boutiques.model.Tool.online_platform_urls": {"fullname": "styx.boutiques.model.Tool.online_platform_urls", "modulename": "styx.boutiques.model", "qualname": "Tool.online_platform_urls", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=None, max_length=None, pattern='^https?://')]]]"}, "styx.boutiques.model.Tool.output_files": {"fullname": "styx.boutiques.model.Tool.output_files", "modulename": "styx.boutiques.model", "qualname": "Tool.output_files", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[Union[styx.boutiques.model.OutputFiles, styx.boutiques.model.OutputFiles1]]]"}, "styx.boutiques.model.Tool.invocation_schema": {"fullname": "styx.boutiques.model.Tool.invocation_schema", "modulename": "styx.boutiques.model", "qualname": "Tool.invocation_schema", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Tool.suggested_resources": {"fullname": "styx.boutiques.model.Tool.suggested_resources", "modulename": "styx.boutiques.model", "qualname": "Tool.suggested_resources", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.SuggestedResources]"}, "styx.boutiques.model.Tool.tags": {"fullname": "styx.boutiques.model.Tool.tags", "modulename": "styx.boutiques.model", "qualname": "Tool.tags", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, List[str]]]"}, "styx.boutiques.model.Tool.error_codes": {"fullname": "styx.boutiques.model.Tool.error_codes", "modulename": "styx.boutiques.model", "qualname": "Tool.error_codes", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.ErrorCode]]"}, "styx.boutiques.model.Tool.custom": {"fullname": "styx.boutiques.model.Tool.custom", "modulename": "styx.boutiques.model", "qualname": "Tool.custom", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Tool.model_fields": {"fullname": "styx.boutiques.model.Tool.model_fields", "modulename": "styx.boutiques.model", "qualname": "Tool.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'name': FieldInfo(annotation=str, required=True, description='Tool name.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'tool_version': FieldInfo(annotation=str, required=True, alias='tool-version', alias_priority=2, description='Tool version.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=str, required=True, description='Tool description.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'deprecated_by_doi': FieldInfo(annotation=Union[Annotated[str, StringConstraints], bool, NoneType], required=False, alias='deprecated-by-doi', alias_priority=2, description="doi of the tool that deprecates the current one. May be set to 'true' if the current tool is deprecated but no specific tool deprecates it."), 'author': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='Tool author name(s).'), 'url': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='Tool URL.'), 'descriptor_url': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='descriptor-url', alias_priority=2, description='Link to the descriptor itself (e.g. the GitHub repo where it is hosted).'), 'doi': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='DOI of the descriptor (not of the tool itself).'), 'shell': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='Absolute path of the shell interpreter to use in the container (defaults to /bin/sh).'), 'tool_doi': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='tool-doi', alias_priority=2, description='DOI of the tool (not of the descriptor).'), 'command_line': FieldInfo(annotation=str, required=True, alias='command-line', alias_priority=2, description='A string that describes the tool command line, where input and output values are identified by "keys". At runtime, command-line keys are substituted with flags and values.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'container_image': FieldInfo(annotation=Union[ContainerImage, NoneType], required=False, alias='container-image', alias_priority=2), 'schema_version': FieldInfo(annotation=SchemaVersion, required=True, alias='schema-version', alias_priority=2, description='Version of the schema used.'), 'environment_variables': FieldInfo(annotation=Union[List[EnvironmentVariable], NoneType], required=False, alias='environment-variables', alias_priority=2, description='An array of key-value pairs specifying environment variable names and their values to be used in the execution environment.', metadata=[MinLen(min_length=1)]), 'groups': FieldInfo(annotation=Union[List[Group], NoneType], required=False, description='Sets of identifiers of inputs, each specifying an input group.', metadata=[MinLen(min_length=1)]), 'inputs': FieldInfo(annotation=List[Union[Inputs, Inputs1]], required=True, metadata=[MinLen(min_length=1)]), 'tests': FieldInfo(annotation=Union[List[Test], NoneType], required=False, metadata=[MinLen(min_length=1)]), 'online_platform_urls': FieldInfo(annotation=Union[List[Annotated[str, StringConstraints]], NoneType], required=False, alias='online-platform-urls', alias_priority=2, description='Online platform URLs from which the tool can be executed.'), 'output_files': FieldInfo(annotation=Union[List[Union[OutputFiles, OutputFiles1]], NoneType], required=False, alias='output-files', alias_priority=2, metadata=[MinLen(min_length=1)]), 'invocation_schema': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False, alias='invocation-schema', alias_priority=2), 'suggested_resources': FieldInfo(annotation=Union[SuggestedResources, NoneType], required=False, alias='suggested-resources', alias_priority=2), 'tags': FieldInfo(annotation=Union[Dict[str, List[str]], NoneType], required=False, description='A set of key-value pairs specifying tags describing the pipeline. The tag names are open, they might be more constrained in the future.'), 'error_codes': FieldInfo(annotation=Union[List[ErrorCode], NoneType], required=False, alias='error-codes', alias_priority=2, description='An array of key-value pairs specifying exit codes and their description. Can be used for tools to specify the meaning of particular exit codes. Exit code 0 is assumed to indicate a successful execution.', metadata=[MinLen(min_length=1)]), 'custom': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False)}"}, "styx.boutiques.model.Tool.model_computed_fields": {"fullname": "styx.boutiques.model.Tool.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Tool.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.utils": {"fullname": "styx.boutiques.utils", "modulename": "styx.boutiques.utils", "kind": "module", "doc": "

\n"}, "styx.boutiques.utils.boutiques_from_dict": {"fullname": "styx.boutiques.utils.boutiques_from_dict", "modulename": "styx.boutiques.utils", "qualname": "boutiques_from_dict", "kind": "function", "doc": "

Create a Boutiques model from a dictionary.

\n\n
Arguments:
\n\n
    \n
  • data (dict): The dictionary.
    • \n
\n\n
Returns:
\n\n
\n

styx.boutiques.model.Tool: The Boutiques model.

\n
\n", "signature": "(data: dict) -> styx.boutiques.model.Tool:", "funcdef": "def"}, "styx.boutiques.utils.boutiques_split_command": {"fullname": "styx.boutiques.utils.boutiques_split_command", "modulename": "styx.boutiques.utils", "qualname": "boutiques_split_command", "kind": "function", "doc": "

Split a Boutiques command into a list of arguments.

\n\n
Arguments:
\n\n
    \n
  • command (str): The Boutiques command.
    • \n
\n\n
Returns:
\n\n
\n

list[str]: The list of arguments.

\n
\n", "signature": "(command: str) -> list[str]:", "funcdef": "def"}, "styx.cli": {"fullname": "styx.cli", "modulename": "styx.cli", "kind": "module", "doc": "

Command line interface for styx.

\n"}, "styx.compiler": {"fullname": "styx.compiler", "modulename": "styx.compiler", "kind": "module", "doc": "

Boutiques to python compiler.

\n"}, "styx.compiler.core": {"fullname": "styx.compiler.core", "modulename": "styx.compiler.core", "kind": "module", "doc": "

\n"}, "styx.compiler.core.BtPrimitive": {"fullname": "styx.compiler.core.BtPrimitive", "modulename": "styx.compiler.core", "qualname": "BtPrimitive", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.compiler.core.BtPrimitive.String": {"fullname": "styx.compiler.core.BtPrimitive.String", "modulename": "styx.compiler.core", "qualname": "BtPrimitive.String", "kind": "variable", "doc": "

\n", "default_value": "<BtPrimitive.String: 1>"}, "styx.compiler.core.BtPrimitive.Number": {"fullname": "styx.compiler.core.BtPrimitive.Number", "modulename": "styx.compiler.core", "qualname": "BtPrimitive.Number", "kind": "variable", "doc": "

\n", "default_value": "<BtPrimitive.Number: 2>"}, "styx.compiler.core.BtPrimitive.Integer": {"fullname": "styx.compiler.core.BtPrimitive.Integer", "modulename": "styx.compiler.core", "qualname": "BtPrimitive.Integer", "kind": "variable", "doc": "

\n", "default_value": "<BtPrimitive.Integer: 3>"}, "styx.compiler.core.BtPrimitive.File": {"fullname": "styx.compiler.core.BtPrimitive.File", "modulename": "styx.compiler.core", "qualname": "BtPrimitive.File", "kind": "variable", "doc": "

\n", "default_value": "<BtPrimitive.File: 4>"}, "styx.compiler.core.BtPrimitive.Flag": {"fullname": "styx.compiler.core.BtPrimitive.Flag", "modulename": "styx.compiler.core", "qualname": "BtPrimitive.Flag", "kind": "variable", "doc": "

\n", "default_value": "<BtPrimitive.Flag: 5>"}, "styx.compiler.core.BtType": {"fullname": "styx.compiler.core.BtType", "modulename": "styx.compiler.core", "qualname": "BtType", "kind": "class", "doc": "

\n"}, "styx.compiler.core.BtType.__init__": {"fullname": "styx.compiler.core.BtType.__init__", "modulename": "styx.compiler.core", "qualname": "BtType.__init__", "kind": "function", "doc": "

\n", "signature": "(\tprimitive: styx.compiler.core.BtPrimitive,\tis_list: bool,\tis_optional: bool,\tis_enum: bool)"}, "styx.compiler.core.BtType.primitive": {"fullname": "styx.compiler.core.BtType.primitive", "modulename": "styx.compiler.core", "qualname": "BtType.primitive", "kind": "variable", "doc": "

\n", "annotation": ": styx.compiler.core.BtPrimitive"}, "styx.compiler.core.BtType.is_list": {"fullname": "styx.compiler.core.BtType.is_list", "modulename": "styx.compiler.core", "qualname": "BtType.is_list", "kind": "variable", "doc": "

\n", "annotation": ": bool"}, "styx.compiler.core.BtType.is_optional": {"fullname": "styx.compiler.core.BtType.is_optional", "modulename": "styx.compiler.core", "qualname": "BtType.is_optional", "kind": "variable", "doc": "

\n", "annotation": ": bool"}, "styx.compiler.core.BtType.is_enum": {"fullname": "styx.compiler.core.BtType.is_enum", "modulename": "styx.compiler.core", "qualname": "BtType.is_enum", "kind": "variable", "doc": "

\n", "annotation": ": bool"}, "styx.compiler.core.BtInput": {"fullname": "styx.compiler.core.BtInput", "modulename": "styx.compiler.core", "qualname": "BtInput", "kind": "class", "doc": "

\n"}, "styx.compiler.core.BtInput.__init__": {"fullname": "styx.compiler.core.BtInput.__init__", "modulename": "styx.compiler.core", "qualname": "BtInput.__init__", "kind": "function", "doc": "

\n", "signature": "(\tbt_input: styx.boutiques.model.Inputs,\tscope: styx.pycodegen.scope.Scope)"}, "styx.compiler.core.BtInput.bt_ref": {"fullname": "styx.compiler.core.BtInput.bt_ref", "modulename": "styx.compiler.core", "qualname": "BtInput.bt_ref", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.py_symbol": {"fullname": "styx.compiler.core.BtInput.py_symbol", "modulename": "styx.compiler.core", "qualname": "BtInput.py_symbol", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.docstring": {"fullname": "styx.compiler.core.BtInput.docstring", "modulename": "styx.compiler.core", "qualname": "BtInput.docstring", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.command_line_flag": {"fullname": "styx.compiler.core.BtInput.command_line_flag", "modulename": "styx.compiler.core", "qualname": "BtInput.command_line_flag", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.list_separator": {"fullname": "styx.compiler.core.BtInput.list_separator", "modulename": "styx.compiler.core", "qualname": "BtInput.list_separator", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.minimum": {"fullname": "styx.compiler.core.BtInput.minimum", "modulename": "styx.compiler.core", "qualname": "BtInput.minimum", "kind": "variable", "doc": "

\n", "annotation": ": float | int | None"}, "styx.compiler.core.BtInput.minimum_exclusive": {"fullname": "styx.compiler.core.BtInput.minimum_exclusive", "modulename": "styx.compiler.core", "qualname": "BtInput.minimum_exclusive", "kind": "variable", "doc": "

\n", "annotation": ": bool"}, "styx.compiler.core.BtInput.maximum": {"fullname": "styx.compiler.core.BtInput.maximum", "modulename": "styx.compiler.core", "qualname": "BtInput.maximum", "kind": "variable", "doc": "

\n", "annotation": ": float | int | None"}, "styx.compiler.core.BtInput.maximum_exclusive": {"fullname": "styx.compiler.core.BtInput.maximum_exclusive", "modulename": "styx.compiler.core", "qualname": "BtInput.maximum_exclusive", "kind": "variable", "doc": "

\n", "annotation": ": bool"}, "styx.compiler.core.BtInput.list_minimum": {"fullname": "styx.compiler.core.BtInput.list_minimum", "modulename": "styx.compiler.core", "qualname": "BtInput.list_minimum", "kind": "variable", "doc": "

\n", "annotation": ": int | None"}, "styx.compiler.core.BtInput.list_maximum": {"fullname": "styx.compiler.core.BtInput.list_maximum", "modulename": "styx.compiler.core", "qualname": "BtInput.list_maximum", "kind": "variable", "doc": "

\n", "annotation": ": int | None"}, "styx.compiler.core.BtInput.py_type": {"fullname": "styx.compiler.core.BtInput.py_type", "modulename": "styx.compiler.core", "qualname": "BtInput.py_type", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.py_default": {"fullname": "styx.compiler.core.BtInput.py_default", "modulename": "styx.compiler.core", "qualname": "BtInput.py_default", "kind": "variable", "doc": "

\n", "annotation": ": str | None"}, "styx.compiler.core.BtInput.py_expr": {"fullname": "styx.compiler.core.BtInput.py_expr", "modulename": "styx.compiler.core", "qualname": "BtInput.py_expr", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"fullname": "styx.compiler.core.BtInput.bt_type_to_py_type", "modulename": "styx.compiler.core", "qualname": "BtInput.bt_type_to_py_type", "kind": "function", "doc": "

\n", "signature": "(cls, bt_type: styx.compiler.core.BtType, enum_values: list | None) -> str:", "funcdef": "def"}, "styx.compiler.core.compile_descriptor": {"fullname": "styx.compiler.core.compile_descriptor", "modulename": "styx.compiler.core", "qualname": "compile_descriptor", "kind": "function", "doc": "

Compile a Boutiques descriptor to Python code.

\n", "signature": "(\tdescriptor: styx.boutiques.model.Tool,\tsettings: styx.compiler.settings.CompilerSettings) -> str:", "funcdef": "def"}, "styx.compiler.defs": {"fullname": "styx.compiler.defs", "modulename": "styx.compiler.defs", "kind": "module", "doc": "

Static type declarations used by compiled code.

\n"}, "styx.compiler.defs.STYX_DEFINITIONS": {"fullname": "styx.compiler.defs.STYX_DEFINITIONS", "modulename": "styx.compiler.defs", "qualname": "STYX_DEFINITIONS", "kind": "variable", "doc": "

\n", "default_value": "['P = typing.TypeVar("P")', '"""Input host file type."""', 'R = typing.TypeVar("R")', '"""Output host file type."""', '', '', 'class Execution(typing.Protocol[P, R]):', ' """', ' Execution object used to execute commands.', ' Created by `Runner.start_execution()`.', ' """', ' def input_file(self, host_file: P) -> str:', ' """', ' Resolve host input files.', ' Returns a local filepath.', ' Called (potentially multiple times) after `Runner.start_execution()` and before `Runner.run()`.', ' """', ' ...', ' def run(self, cargs: list[str]) -> None:', ' """', ' Run the command.', ' Called after all `Execution.input_file()` calls and before `Execution.output_file()` calls.', ' """', ' ...', ' def output_file(self, local_file: str) -> R:', ' """', ' Resolve local output files.', ' Returns a host filepath.', ' Called (potentially multiple times) after `Runner.run()` and before `Execution.finalize()`.', ' """', ' ...', ' def finalize(self) -> None:', ' """', ' Finalize the execution.', ' Called after all `Execution.output_file()` calls.', ' """', ' ...', '', '', 'class Runner(typing.Protocol[P, R]):', ' """', ' Runner object used to execute commands.', ' Possible examples would be `LocalRunner`, `DockerRunner`, `DebugRunner`, ...', ' Used as a factory for `Execution` objects.', ' """', ' def start_execution(self, tool_name: str) -> Execution[P, R]:', ' """', ' Start an execution.', ' Called before any `Execution.input_file()` calls.', ' """', ' ...']"}, "styx.compiler.settings": {"fullname": "styx.compiler.settings", "modulename": "styx.compiler.settings", "kind": "module", "doc": "

Compiler settings.

\n"}, "styx.compiler.settings.DefsMode": {"fullname": "styx.compiler.settings.DefsMode", "modulename": "styx.compiler.settings", "qualname": "DefsMode", "kind": "class", "doc": "

Runtime definitions mode.

\n", "bases": "enum.Enum"}, "styx.compiler.settings.DefsMode.INLINE": {"fullname": "styx.compiler.settings.DefsMode.INLINE", "modulename": "styx.compiler.settings", "qualname": "DefsMode.INLINE", "kind": "variable", "doc": "

\n", "default_value": "<DefsMode.INLINE: 0>"}, "styx.compiler.settings.DefsMode.IMPORT": {"fullname": "styx.compiler.settings.DefsMode.IMPORT", "modulename": "styx.compiler.settings", "qualname": "DefsMode.IMPORT", "kind": "variable", "doc": "

\n", "default_value": "<DefsMode.IMPORT: 1>"}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"fullname": "styx.compiler.settings.DefsMode.DEFS_ONLY", "modulename": "styx.compiler.settings", "qualname": "DefsMode.DEFS_ONLY", "kind": "variable", "doc": "

\n", "default_value": "<DefsMode.DEFS_ONLY: 2>"}, "styx.compiler.settings.CompilerSettings": {"fullname": "styx.compiler.settings.CompilerSettings", "modulename": "styx.compiler.settings", "qualname": "CompilerSettings", "kind": "class", "doc": "

\n"}, "styx.compiler.settings.CompilerSettings.__init__": {"fullname": "styx.compiler.settings.CompilerSettings.__init__", "modulename": "styx.compiler.settings", "qualname": "CompilerSettings.__init__", "kind": "function", "doc": "

\n", "signature": "(defs_mode: styx.compiler.settings.DefsMode = <DefsMode.INLINE: 0>)"}, "styx.compiler.settings.CompilerSettings.defs_mode": {"fullname": "styx.compiler.settings.CompilerSettings.defs_mode", "modulename": "styx.compiler.settings", "qualname": "CompilerSettings.defs_mode", "kind": "variable", "doc": "

\n", "annotation": ": styx.compiler.settings.DefsMode", "default_value": "<DefsMode.INLINE: 0>"}, "styx.compiler.utils": {"fullname": "styx.compiler.utils", "modulename": "styx.compiler.utils", "kind": "module", "doc": "

Compiler utilities.

\n"}, "styx.compiler.utils.optional_float_to_int": {"fullname": "styx.compiler.utils.optional_float_to_int", "modulename": "styx.compiler.utils", "qualname": "optional_float_to_int", "kind": "function", "doc": "

Convert an optional float to an optional int.

\n", "signature": "(value: float | None) -> int | None:", "funcdef": "def"}, "styx.main": {"fullname": "styx.main", "modulename": "styx.main", "kind": "module", "doc": "

\n"}, "styx.main.main": {"fullname": "styx.main.main", "modulename": "styx.main", "qualname": "main", "kind": "function", "doc": "

\n", "signature": "() -> None:", "funcdef": "def"}, "styx.pycodegen": {"fullname": "styx.pycodegen", "modulename": "styx.pycodegen", "kind": "module", "doc": "

Generic Python code generation utilities. Implemented on demand.

\n"}, "styx.pycodegen.core": {"fullname": "styx.pycodegen.core", "modulename": "styx.pycodegen.core", "kind": "module", "doc": "

Generic Python code generation utilities. Implemented on demand.

\n"}, "styx.pycodegen.core.LineBuffer": {"fullname": "styx.pycodegen.core.LineBuffer", "modulename": "styx.pycodegen.core", "qualname": "LineBuffer", "kind": "variable", "doc": "

\n", "default_value": "list[str]"}, "styx.pycodegen.core.INDENT": {"fullname": "styx.pycodegen.core.INDENT", "modulename": "styx.pycodegen.core", "qualname": "INDENT", "kind": "variable", "doc": "

\n", "default_value": "' '"}, "styx.pycodegen.core.indent": {"fullname": "styx.pycodegen.core.indent", "modulename": "styx.pycodegen.core", "qualname": "indent", "kind": "function", "doc": "

Indent a LineBuffer by a given level.

\n", "signature": "(lines: list[str], level: int = 1) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.comment": {"fullname": "styx.pycodegen.core.comment", "modulename": "styx.pycodegen.core", "qualname": "comment", "kind": "function", "doc": "

Add a comment to a LineBuffer.

\n", "signature": "(lines: list[str]) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.collapse": {"fullname": "styx.pycodegen.core.collapse", "modulename": "styx.pycodegen.core", "qualname": "collapse", "kind": "function", "doc": "

Collapse a LineBuffer into a single string.

\n", "signature": "(lines: list[str]) -> str:", "funcdef": "def"}, "styx.pycodegen.core.expand": {"fullname": "styx.pycodegen.core.expand", "modulename": "styx.pycodegen.core", "qualname": "expand", "kind": "function", "doc": "

Expand a string into a LineBuffer.

\n", "signature": "(text: str) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.blank_before": {"fullname": "styx.pycodegen.core.blank_before", "modulename": "styx.pycodegen.core", "qualname": "blank_before", "kind": "function", "doc": "

Add blank lines at the beginning of a LineBuffer if it is not empty.

\n", "signature": "(lines: list[str], blanks: int = 1) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.blank_after": {"fullname": "styx.pycodegen.core.blank_after", "modulename": "styx.pycodegen.core", "qualname": "blank_after", "kind": "function", "doc": "

Add blank lines at the end of a LineBuffer if it is not empty.

\n", "signature": "(lines: list[str], blanks: int = 1) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.PyGen": {"fullname": "styx.pycodegen.core.PyGen", "modulename": "styx.pycodegen.core", "qualname": "PyGen", "kind": "class", "doc": "

Helper class that provides a standard way to create an ABC using\ninheritance.

\n", "bases": "abc.ABC"}, "styx.pycodegen.core.PyGen.generate": {"fullname": "styx.pycodegen.core.PyGen.generate", "modulename": "styx.pycodegen.core", "qualname": "PyGen.generate", "kind": "function", "doc": "

\n", "signature": "(self) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.PyGen.text": {"fullname": "styx.pycodegen.core.PyGen.text", "modulename": "styx.pycodegen.core", "qualname": "PyGen.text", "kind": "function", "doc": "

\n", "signature": "(self) -> str:", "funcdef": "def"}, "styx.pycodegen.core.PyArg": {"fullname": "styx.pycodegen.core.PyArg", "modulename": "styx.pycodegen.core", "qualname": "PyArg", "kind": "class", "doc": "

\n"}, "styx.pycodegen.core.PyArg.__init__": {"fullname": "styx.pycodegen.core.PyArg.__init__", "modulename": "styx.pycodegen.core", "qualname": "PyArg.__init__", "kind": "function", "doc": "

\n", "signature": "(name: str, type: str, default: str | None, docstring: str)"}, "styx.pycodegen.core.PyArg.name": {"fullname": "styx.pycodegen.core.PyArg.name", "modulename": "styx.pycodegen.core", "qualname": "PyArg.name", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyArg.type": {"fullname": "styx.pycodegen.core.PyArg.type", "modulename": "styx.pycodegen.core", "qualname": "PyArg.type", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyArg.default": {"fullname": "styx.pycodegen.core.PyArg.default", "modulename": "styx.pycodegen.core", "qualname": "PyArg.default", "kind": "variable", "doc": "

\n", "annotation": ": str | None"}, "styx.pycodegen.core.PyArg.docstring": {"fullname": "styx.pycodegen.core.PyArg.docstring", "modulename": "styx.pycodegen.core", "qualname": "PyArg.docstring", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyFunc": {"fullname": "styx.pycodegen.core.PyFunc", "modulename": "styx.pycodegen.core", "qualname": "PyFunc", "kind": "class", "doc": "

\n", "bases": "PyGen"}, "styx.pycodegen.core.PyFunc.__init__": {"fullname": "styx.pycodegen.core.PyFunc.__init__", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.__init__", "kind": "function", "doc": "

\n", "signature": "(\tname: str,\targs: list[styx.pycodegen.core.PyArg],\tdocstring_body: str,\tbody: list[str],\treturn_descr: str,\treturn_type: str | None = None)"}, "styx.pycodegen.core.PyFunc.name": {"fullname": "styx.pycodegen.core.PyFunc.name", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.name", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyFunc.args": {"fullname": "styx.pycodegen.core.PyFunc.args", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.args", "kind": "variable", "doc": "

\n", "annotation": ": list[styx.pycodegen.core.PyArg]"}, "styx.pycodegen.core.PyFunc.docstring_body": {"fullname": "styx.pycodegen.core.PyFunc.docstring_body", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.docstring_body", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyFunc.body": {"fullname": "styx.pycodegen.core.PyFunc.body", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.body", "kind": "variable", "doc": "

\n", "annotation": ": list[str]"}, "styx.pycodegen.core.PyFunc.return_descr": {"fullname": "styx.pycodegen.core.PyFunc.return_descr", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.return_descr", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyFunc.return_type": {"fullname": "styx.pycodegen.core.PyFunc.return_type", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.return_type", "kind": "variable", "doc": "

\n", "annotation": ": str | None", "default_value": "None"}, "styx.pycodegen.core.PyFunc.generate": {"fullname": "styx.pycodegen.core.PyFunc.generate", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.generate", "kind": "function", "doc": "

\n", "signature": "(self) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.PyModule": {"fullname": "styx.pycodegen.core.PyModule", "modulename": "styx.pycodegen.core", "qualname": "PyModule", "kind": "class", "doc": "

\n", "bases": "PyGen"}, "styx.pycodegen.core.PyModule.__init__": {"fullname": "styx.pycodegen.core.PyModule.__init__", "modulename": "styx.pycodegen.core", "qualname": "PyModule.__init__", "kind": "function", "doc": "

\n", "signature": "(\timports: list[str] = <factory>,\theader: list[str] = <factory>,\tfuncs: list[styx.pycodegen.core.PyFunc] = <factory>,\tfooter: list[str] = <factory>)"}, "styx.pycodegen.core.PyModule.imports": {"fullname": "styx.pycodegen.core.PyModule.imports", "modulename": "styx.pycodegen.core", "qualname": "PyModule.imports", "kind": "variable", "doc": "

\n", "annotation": ": list[str]"}, "styx.pycodegen.core.PyModule.header": {"fullname": "styx.pycodegen.core.PyModule.header", "modulename": "styx.pycodegen.core", "qualname": "PyModule.header", "kind": "variable", "doc": "

\n", "annotation": ": list[str]"}, "styx.pycodegen.core.PyModule.funcs": {"fullname": "styx.pycodegen.core.PyModule.funcs", "modulename": "styx.pycodegen.core", "qualname": "PyModule.funcs", "kind": "variable", "doc": "

\n", "annotation": ": list[styx.pycodegen.core.PyFunc]"}, "styx.pycodegen.core.PyModule.footer": {"fullname": "styx.pycodegen.core.PyModule.footer", "modulename": "styx.pycodegen.core", "qualname": "PyModule.footer", "kind": "variable", "doc": "

\n", "annotation": ": list[str]"}, "styx.pycodegen.core.PyModule.generate": {"fullname": "styx.pycodegen.core.PyModule.generate", "modulename": "styx.pycodegen.core", "qualname": "PyModule.generate", "kind": "function", "doc": "

\n", "signature": "(self) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.format": {"fullname": "styx.pycodegen.format", "modulename": "styx.pycodegen.format", "kind": "module", "doc": "

Format code using ruff.

\n"}, "styx.pycodegen.format.format_code": {"fullname": "styx.pycodegen.format.format_code", "modulename": "styx.pycodegen.format", "qualname": "format_code", "kind": "function", "doc": "

Format code using ruff.

\n", "signature": "(code: str) -> str | None:", "funcdef": "def"}, "styx.pycodegen.scope": {"fullname": "styx.pycodegen.scope", "modulename": "styx.pycodegen.scope", "kind": "module", "doc": "

\n"}, "styx.pycodegen.scope.Scope": {"fullname": "styx.pycodegen.scope.Scope", "modulename": "styx.pycodegen.scope", "qualname": "Scope", "kind": "class", "doc": "

A scope for Python symbols.

\n"}, "styx.pycodegen.scope.Scope.__init__": {"fullname": "styx.pycodegen.scope.Scope.__init__", "modulename": "styx.pycodegen.scope", "qualname": "Scope.__init__", "kind": "function", "doc": "

Create a scope.

\n", "signature": "(parent: styx.pycodegen.scope.Scope | None = None)"}, "styx.pycodegen.scope.Scope.parent": {"fullname": "styx.pycodegen.scope.Scope.parent", "modulename": "styx.pycodegen.scope", "qualname": "Scope.parent", "kind": "variable", "doc": "

\n", "annotation": ": styx.pycodegen.scope.Scope | None"}, "styx.pycodegen.scope.Scope.add_or_dodge": {"fullname": "styx.pycodegen.scope.Scope.add_or_dodge", "modulename": "styx.pycodegen.scope", "qualname": "Scope.add_or_dodge", "kind": "function", "doc": "

Add a symbol to the scope, avoiding collisions.

\n", "signature": "(self, symbol: str) -> str:", "funcdef": "def"}, "styx.pycodegen.scope.Scope.add_or_die": {"fullname": "styx.pycodegen.scope.Scope.add_or_die", "modulename": "styx.pycodegen.scope", "qualname": "Scope.add_or_die", "kind": "function", "doc": "

Add a symbol to the scope.

\n", "signature": "(self, symbol: str) -> str:", "funcdef": "def"}, "styx.pycodegen.scope.Scope.python": {"fullname": "styx.pycodegen.scope.Scope.python", "modulename": "styx.pycodegen.scope", "qualname": "Scope.python", "kind": "function", "doc": "

Create a scope with all Python keywords, standard library modules, and builtins.

\n", "signature": "(cls) -> styx.pycodegen.scope.Scope:", "funcdef": "def"}, "styx.pycodegen.utils": {"fullname": "styx.pycodegen.utils", "modulename": "styx.pycodegen.utils", "kind": "module", "doc": "

\n"}, "styx.pycodegen.utils.ensure_python_symbol": {"fullname": "styx.pycodegen.utils.ensure_python_symbol", "modulename": "styx.pycodegen.utils", "qualname": "ensure_python_symbol", "kind": "function", "doc": "

Ensure that a string is a valid Python symbol.

\n\n
Arguments:
\n\n
    \n
  • name (str): The string to be converted.
    • \n
\n\n
Returns:
\n\n
\n

str: A valid Python symbol.

\n
\n", "signature": "(name: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.ensure_snake_case": {"fullname": "styx.pycodegen.utils.ensure_snake_case", "modulename": "styx.pycodegen.utils", "qualname": "ensure_snake_case", "kind": "function", "doc": "

Converts a string to snake case.

\n\n

Consecutive uppercase letters do not receive underscores between them.

\n\n
Arguments:
\n\n
    \n
  • string: The string to convert.
    • \n
\n\n
Returns:
\n\n
\n

The converted string.

\n
\n", "signature": "(string: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.ensure_camel_case": {"fullname": "styx.pycodegen.utils.ensure_camel_case", "modulename": "styx.pycodegen.utils", "qualname": "ensure_camel_case", "kind": "function", "doc": "

Converts a string to camel case.

\n\n
Arguments:
\n\n
    \n
  • string: The string to convert.
    • \n
\n\n
Returns:
\n\n
\n

The converted string.

\n
\n", "signature": "(string: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.python_camelize": {"fullname": "styx.pycodegen.utils.python_camelize", "modulename": "styx.pycodegen.utils", "qualname": "python_camelize", "kind": "function", "doc": "

Converts a string to camel case.

\n\n
Arguments:
\n\n
    \n
  • string: The string to convert.
    • \n
\n\n
Returns:
\n\n
\n

The converted string.

\n
\n", "signature": "(string: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.python_snakify": {"fullname": "styx.pycodegen.utils.python_snakify", "modulename": "styx.pycodegen.utils", "qualname": "python_snakify", "kind": "function", "doc": "

Converts a string to snake case.

\n\n
Arguments:
\n\n
    \n
  • string: The string to convert.
    • \n
\n\n
Returns:
\n\n
\n

The converted string.

\n
\n", "signature": "(string: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.python_screaming_snakify": {"fullname": "styx.pycodegen.utils.python_screaming_snakify", "modulename": "styx.pycodegen.utils", "qualname": "python_screaming_snakify", "kind": "function", "doc": "

Converts a string to screaming snake case.

\n\n
Arguments:
\n\n
    \n
  • string: The string to convert.
    • \n
\n\n
Returns:
\n\n
\n

The converted string.

\n
\n", "signature": "(string: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.enquote": {"fullname": "styx.pycodegen.utils.enquote", "modulename": "styx.pycodegen.utils", "qualname": "enquote", "kind": "function", "doc": "

Put a string in \"quotes\".

\n", "signature": "(s: str, quote: str = '"') -> str:", "funcdef": "def"}, "styx.pycodegen.utils.enbrace": {"fullname": "styx.pycodegen.utils.enbrace", "modulename": "styx.pycodegen.utils", "qualname": "enbrace", "kind": "function", "doc": "

Put a string in {braces}.

\n", "signature": "(s: str, brace_type: str = '{') -> str:", "funcdef": "def"}, "styx.pycodegen.utils.as_py_literal": {"fullname": "styx.pycodegen.utils.as_py_literal", "modulename": "styx.pycodegen.utils", "qualname": "as_py_literal", "kind": "function", "doc": "

Convert an object to a Python literal expression.

\n", "signature": "(\tobj: Union[str, float, int, bool, list[Union[str, float, int, bool, list[ForwardRef('_TYPE_PYLITERAL')]]]],\tquote: str = '"') -> str:", "funcdef": "def"}, "styx.runners": {"fullname": "styx.runners", "modulename": "styx.runners", "kind": "module", "doc": "

Example runners.

\n"}, "styx.runners.dummy": {"fullname": "styx.runners.dummy", "modulename": "styx.runners.dummy", "kind": "module", "doc": "

\n"}, "styx.runners.dummy.DummyRunner": {"fullname": "styx.runners.dummy.DummyRunner", "modulename": "styx.runners.dummy", "qualname": "DummyRunner", "kind": "class", "doc": "

Runner object used to execute commands.

\n\n

Possible examples would be LocalRunner,\nDockerRunner, DebugRunner, ...\nUsed as a factory for Execution objects.

\n", "bases": "styx.runners.styxdefs.Runner[str, str], styx.runners.styxdefs.Execution[str, str]"}, "styx.runners.dummy.DummyRunner.last_cargs": {"fullname": "styx.runners.dummy.DummyRunner.last_cargs", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.last_cargs", "kind": "variable", "doc": "

\n", "annotation": ": list[str] | None"}, "styx.runners.dummy.DummyRunner.last_metadata": {"fullname": "styx.runners.dummy.DummyRunner.last_metadata", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.last_metadata", "kind": "variable", "doc": "

\n", "annotation": ": styx.runners.styxdefs.Metadata | None"}, "styx.runners.dummy.DummyRunner.start_execution": {"fullname": "styx.runners.dummy.DummyRunner.start_execution", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.start_execution", "kind": "function", "doc": "

Start an execution.

\n\n

Called before any Execution.input_file() calls.

\n", "signature": "(\tself,\tmetadata: styx.runners.styxdefs.Metadata) -> styx.runners.styxdefs.Execution[str, str]:", "funcdef": "def"}, "styx.runners.dummy.DummyRunner.input_file": {"fullname": "styx.runners.dummy.DummyRunner.input_file", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.input_file", "kind": "function", "doc": "

Resolve host input files.

\n\n

Returns a local filepath.\nCalled (potentially multiple times) after\nRunner.start_execution() and before Runner.run().

\n", "signature": "(self, host_file: str) -> str:", "funcdef": "def"}, "styx.runners.dummy.DummyRunner.run": {"fullname": "styx.runners.dummy.DummyRunner.run", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.run", "kind": "function", "doc": "

Run the command.

\n\n

Called after all Execution.input_file()\ncalls and before Execution.output_file() calls.

\n", "signature": "(self, cargs: list[str]) -> None:", "funcdef": "def"}, "styx.runners.dummy.DummyRunner.output_file": {"fullname": "styx.runners.dummy.DummyRunner.output_file", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.output_file", "kind": "function", "doc": "

Resolve local output files.

\n\n

Returns a host filepath.\nCalled (potentially multiple times) after\nRunner.run() and before Execution.finalize().

\n", "signature": "(self, local_file: str, optional: bool = False) -> str:", "funcdef": "def"}, "styx.runners.dummy.DummyRunner.finalize": {"fullname": "styx.runners.dummy.DummyRunner.finalize", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.finalize", "kind": "function", "doc": "

Finalize the execution.

\n\n

Called after all Execution.output_file() calls.

\n", "signature": "(self) -> None:", "funcdef": "def"}, "styx.runners.local": {"fullname": "styx.runners.local", "modulename": "styx.runners.local", "kind": "module", "doc": "

\n"}, "styx.runners.styxdefs": {"fullname": "styx.runners.styxdefs", "modulename": "styx.runners.styxdefs", "kind": "module", "doc": "

\n"}, "styx.runners.styxdefs.P": {"fullname": "styx.runners.styxdefs.P", "modulename": "styx.runners.styxdefs", "qualname": "P", "kind": "variable", "doc": "

Input host file type.

\n", "default_value": "-P"}, "styx.runners.styxdefs.R": {"fullname": "styx.runners.styxdefs.R", "modulename": "styx.runners.styxdefs", "qualname": "R", "kind": "variable", "doc": "

Output host file type.

\n", "default_value": "+R"}, "styx.runners.styxdefs.Execution": {"fullname": "styx.runners.styxdefs.Execution", "modulename": "styx.runners.styxdefs", "qualname": "Execution", "kind": "class", "doc": "

Execution object used to execute commands.

\n\n

Created by Runner.start_execution().

\n", "bases": "typing.Protocol[-P, +R]"}, "styx.runners.styxdefs.Execution.__init__": {"fullname": "styx.runners.styxdefs.Execution.__init__", "modulename": "styx.runners.styxdefs", "qualname": "Execution.__init__", "kind": "function", "doc": "

\n", "signature": "(*args, **kwargs)"}, "styx.runners.styxdefs.Execution.input_file": {"fullname": "styx.runners.styxdefs.Execution.input_file", "modulename": "styx.runners.styxdefs", "qualname": "Execution.input_file", "kind": "function", "doc": "

Resolve host input files.

\n\n

Returns a local filepath.\nCalled (potentially multiple times) after\nRunner.start_execution() and before Runner.run().

\n", "signature": "(self, host_file: -P) -> str:", "funcdef": "def"}, "styx.runners.styxdefs.Execution.run": {"fullname": "styx.runners.styxdefs.Execution.run", "modulename": "styx.runners.styxdefs", "qualname": "Execution.run", "kind": "function", "doc": "

Run the command.

\n\n

Called after all Execution.input_file()\ncalls and before Execution.output_file() calls.

\n", "signature": "(self, cargs: list[str]) -> None:", "funcdef": "def"}, "styx.runners.styxdefs.Execution.output_file": {"fullname": "styx.runners.styxdefs.Execution.output_file", "modulename": "styx.runners.styxdefs", "qualname": "Execution.output_file", "kind": "function", "doc": "

Resolve local output files.

\n\n

Returns a host filepath.\nCalled (potentially multiple times) after\nRunner.run() and before Execution.finalize().

\n", "signature": "(self, local_file: str, optional: bool = False) -> +R:", "funcdef": "def"}, "styx.runners.styxdefs.Execution.finalize": {"fullname": "styx.runners.styxdefs.Execution.finalize", "modulename": "styx.runners.styxdefs", "qualname": "Execution.finalize", "kind": "function", "doc": "

Finalize the execution.

\n\n

Called after all Execution.output_file() calls.

\n", "signature": "(self) -> None:", "funcdef": "def"}, "styx.runners.styxdefs.Metadata": {"fullname": "styx.runners.styxdefs.Metadata", "modulename": "styx.runners.styxdefs", "qualname": "Metadata", "kind": "class", "doc": "

Static tool metadata.

\n\n

This is structured static metadata that is known at compile time.\nRunners can use this to set up execution environments.

\n", "bases": "typing.NamedTuple"}, "styx.runners.styxdefs.Metadata.__init__": {"fullname": "styx.runners.styxdefs.Metadata.__init__", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.__init__", "kind": "function", "doc": "

Create new instance of Metadata(id, name, container_image_type, container_image_tag, container_image_index, container_image_opts)

\n", "signature": "(\tid: str,\tname: str,\tcontainer_image_type: str | None = None,\tcontainer_image_tag: str | None = None,\tcontainer_image_index: str | None = None,\tcontainer_image_opts: str | None = None)"}, "styx.runners.styxdefs.Metadata.id": {"fullname": "styx.runners.styxdefs.Metadata.id", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.id", "kind": "variable", "doc": "

Unique identifier of the tool.

\n", "annotation": ": str"}, "styx.runners.styxdefs.Metadata.name": {"fullname": "styx.runners.styxdefs.Metadata.name", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.name", "kind": "variable", "doc": "

Name of the tool.

\n", "annotation": ": str"}, "styx.runners.styxdefs.Metadata.container_image_type": {"fullname": "styx.runners.styxdefs.Metadata.container_image_type", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.container_image_type", "kind": "variable", "doc": "

Type of container image. Example: docker, singularity.

\n", "annotation": ": str | None"}, "styx.runners.styxdefs.Metadata.container_image_tag": {"fullname": "styx.runners.styxdefs.Metadata.container_image_tag", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.container_image_tag", "kind": "variable", "doc": "

Name of an image where the tool is installed and configured. Example: bids/mriqc.

\n", "annotation": ": str | None"}, "styx.runners.styxdefs.Metadata.container_image_index": {"fullname": "styx.runners.styxdefs.Metadata.container_image_index", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.container_image_index", "kind": "variable", "doc": "

Optional index where the image is available, if not the standard location. Example: docker.io

\n", "annotation": ": str | None"}, "styx.runners.styxdefs.Metadata.container_image_opts": {"fullname": "styx.runners.styxdefs.Metadata.container_image_opts", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.container_image_opts", "kind": "variable", "doc": "

Container-level arguments for the application. Example: --privileged

\n", "annotation": ": str | None"}, "styx.runners.styxdefs.Runner": {"fullname": "styx.runners.styxdefs.Runner", "modulename": "styx.runners.styxdefs", "qualname": "Runner", "kind": "class", "doc": "

Runner object used to execute commands.

\n\n

Possible examples would be LocalRunner,\nDockerRunner, DebugRunner, ...\nUsed as a factory for Execution objects.

\n", "bases": "typing.Protocol[-P, +R]"}, "styx.runners.styxdefs.Runner.__init__": {"fullname": "styx.runners.styxdefs.Runner.__init__", "modulename": "styx.runners.styxdefs", "qualname": "Runner.__init__", "kind": "function", "doc": "

\n", "signature": "(*args, **kwargs)"}, "styx.runners.styxdefs.Runner.start_execution": {"fullname": "styx.runners.styxdefs.Runner.start_execution", "modulename": "styx.runners.styxdefs", "qualname": "Runner.start_execution", "kind": "function", "doc": "

Start an execution.

\n\n

Called before any Execution.input_file() calls.

\n", "signature": "(\tself,\tmetadata: styx.runners.styxdefs.Metadata) -> styx.runners.styxdefs.Execution[-P, +R]:", "funcdef": "def"}}, "docInfo": {"styx": {"qualname": 0, "fullname": 1, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 178}, "styx.boutiques": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 39}, "styx.boutiques.model": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.Type.docker": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type.singularity": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.ContainerImageItem.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.image": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.index": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.container_opts": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.working_directory": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.container_hash": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 178, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.Type1.rootfs": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.ContainerImageItem1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.url": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 89, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.ContainerImage1.working_directory": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage1.container_hash": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 64, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage2": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 380}, "styx.boutiques.model.ContainerImage2.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage2.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 178, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage3": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 380}, "styx.boutiques.model.ContainerImage3.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage3.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 89, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 5, "doc": 92}, "styx.boutiques.model.ContainerImage.root": {"qualname": 2, "fullname": 5, "annotation": 9, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SchemaVersion": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.SchemaVersion.field_0_5": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 12, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.EnvironmentVariable.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable.name": {"qualname": 2, "fullname": 5, "annotation": 33, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable.value": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 98, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.Group.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.id": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.members": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.mutually_exclusive": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.one_is_required": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.all_or_none": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 256, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type2": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.Type2.Flag": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ListModel": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.ListModel.bool_False": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 8, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.Input.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input.list": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 22, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type3": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.Type3.String": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type3.File": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type3.Number": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.Input1.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 12, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type4": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.Type4.String": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type4.File": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type4.Flag": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type4.Number": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 380}, "styx.boutiques.model.Inputs.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.id": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.value_key": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.list": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.list_separator": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.optional": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.command_line_flag": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.requires_inputs": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.disables_inputs": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.default_value": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.value_choices": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.value_requires": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.value_disables": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.integer": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.minimum": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.maximum": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.exclusive_minimum": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.exclusive_maximum": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.min_list_entries": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.max_list_entries": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.uses_absolute_path": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 906, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 380}, "styx.boutiques.model.Inputs1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.id": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.value_key": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.list": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.list_separator": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.optional": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.command_line_flag": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.requires_inputs": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.disables_inputs": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.default_value": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.value_choices": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.value_requires": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.value_disables": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.integer": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.minimum": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.maximum": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.min_list_entries": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.max_list_entries": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 906, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Test": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.Test.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Test.invocation": {"qualname": 2, "fullname": 5, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Test.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Test.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 51, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Test.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.OutputFile.file_template": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile.list": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 37, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.FileTemplate": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.FileTemplate.bool_False": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 8, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.OutputFile1.file_template": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 21, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ConditionalPathTemplateItem": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 12, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 380}, "styx.boutiques.model.OutputFiles.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.id": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.value_key": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.path_template": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"qualname": 4, "fullname": 7, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.list": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.optional": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.command_line_flag": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.file_template": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 570, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 380}, "styx.boutiques.model.OutputFiles1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.id": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.value_key": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.path_template": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"qualname": 4, "fullname": 7, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.list": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.optional": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.file_template": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 570, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"qualname": 3, "fullname": 6, "annotation": 13, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.ram": {"qualname": 2, "fullname": 5, "annotation": 15, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.disk_space": {"qualname": 3, "fullname": 6, "annotation": 15, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.nodes": {"qualname": 2, "fullname": 5, "annotation": 13, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"qualname": 3, "fullname": 6, "annotation": 15, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 165, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ErrorCode": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.ErrorCode.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ErrorCode.code": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ErrorCode.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ErrorCode.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 36, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.Tool.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.tool_version": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.description": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.deprecated_by_doi": {"qualname": 4, "fullname": 7, "annotation": 25, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.author": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.url": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.descriptor_url": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.doi": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.shell": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.tool_doi": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.command_line": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.container_image": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.schema_version": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.environment_variables": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.groups": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.inputs": {"qualname": 2, "fullname": 5, "annotation": 9, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.tests": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.online_platform_urls": {"qualname": 4, "fullname": 7, "annotation": 25, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.output_files": {"qualname": 3, "fullname": 6, "annotation": 9, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.invocation_schema": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.suggested_resources": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.tags": {"qualname": 2, "fullname": 5, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.error_codes": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.custom": {"qualname": 2, "fullname": 5, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 765, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.utils": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.utils.boutiques_from_dict": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 34, "bases": 0, "doc": 44}, "styx.boutiques.utils.boutiques_split_command": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 25, "bases": 0, "doc": 45}, "styx.cli": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 8}, "styx.compiler": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "styx.compiler.core": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtPrimitive": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.compiler.core.BtPrimitive.String": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtPrimitive.Number": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtPrimitive.Integer": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtPrimitive.File": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtPrimitive.Flag": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtType": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtType.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 66, "bases": 0, "doc": 3}, "styx.compiler.core.BtType.primitive": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtType.is_list": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtType.is_optional": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtType.is_enum": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 57, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.bt_ref": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.py_symbol": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.docstring": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.command_line_flag": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.list_separator": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.minimum": {"qualname": 2, "fullname": 5, "annotation": 6, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.minimum_exclusive": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.maximum": {"qualname": 2, "fullname": 5, "annotation": 6, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.maximum_exclusive": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.list_minimum": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.list_maximum": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.py_type": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.py_default": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.py_expr": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"qualname": 6, "fullname": 9, "annotation": 0, "default_value": 0, "signature": 57, "bases": 0, "doc": 3}, "styx.compiler.core.compile_descriptor": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 61, "bases": 0, "doc": 10}, "styx.compiler.defs": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 10}, "styx.compiler.defs.STYX_DEFINITIONS": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 345, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.settings": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 5}, "styx.compiler.settings.DefsMode": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 6}, "styx.compiler.settings.DefsMode.INLINE": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.settings.DefsMode.IMPORT": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 8, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.settings.CompilerSettings": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.settings.CompilerSettings.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 55, "bases": 0, "doc": 3}, "styx.compiler.settings.CompilerSettings.defs_mode": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.utils": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 5}, "styx.compiler.utils.optional_float_to_int": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 31, "bases": 0, "doc": 11}, "styx.main": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.main.main": {"qualname": 1, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 10, "bases": 0, "doc": 3}, "styx.pycodegen": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 11}, "styx.pycodegen.core": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 11}, "styx.pycodegen.core.LineBuffer": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.INDENT": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 4, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.indent": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 48, "bases": 0, "doc": 10}, "styx.pycodegen.core.comment": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 31, "bases": 0, "doc": 9}, "styx.pycodegen.core.collapse": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 25, "bases": 0, "doc": 10}, "styx.pycodegen.core.expand": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 25, "bases": 0, "doc": 9}, "styx.pycodegen.core.blank_before": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 48, "bases": 0, "doc": 17}, "styx.pycodegen.core.blank_after": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 48, "bases": 0, "doc": 17}, "styx.pycodegen.core.PyGen": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 16}, "styx.pycodegen.core.PyGen.generate": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 20, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyGen.text": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 14, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 50, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg.name": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg.type": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg.default": {"qualname": 2, "fullname": 5, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg.docstring": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 3}, "styx.pycodegen.core.PyFunc.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 113, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.name": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.args": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.docstring_body": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.body": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.return_descr": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.return_type": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.generate": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 20, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 3}, "styx.pycodegen.core.PyModule.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 147, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule.imports": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule.header": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule.funcs": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule.footer": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule.generate": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 20, "bases": 0, "doc": 3}, "styx.pycodegen.format": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "styx.pycodegen.format.format_code": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 25, "bases": 0, "doc": 7}, "styx.pycodegen.scope": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.scope.Scope": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 8}, "styx.pycodegen.scope.Scope.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 42, "bases": 0, "doc": 6}, "styx.pycodegen.scope.Scope.parent": {"qualname": 2, "fullname": 5, "annotation": 7, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.scope.Scope.add_or_dodge": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 24, "bases": 0, "doc": 11}, "styx.pycodegen.scope.Scope.add_or_die": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 24, "bases": 0, "doc": 9}, "styx.pycodegen.scope.Scope.python": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 29, "bases": 0, "doc": 15}, "styx.pycodegen.utils": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.utils.ensure_python_symbol": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 47}, "styx.pycodegen.utils.ensure_snake_case": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 51}, "styx.pycodegen.utils.ensure_camel_case": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 39}, "styx.pycodegen.utils.python_camelize": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 39}, "styx.pycodegen.utils.python_snakify": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 39}, "styx.pycodegen.utils.python_screaming_snakify": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 40}, "styx.pycodegen.utils.enquote": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 40, "bases": 0, "doc": 8}, "styx.pycodegen.utils.enbrace": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 41, "bases": 0, "doc": 8}, "styx.pycodegen.utils.as_py_literal": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 119, "bases": 0, "doc": 11}, "styx.runners": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 5}, "styx.runners.dummy": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.dummy.DummyRunner": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 10, "doc": 34}, "styx.runners.dummy.DummyRunner.last_cargs": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.dummy.DummyRunner.last_metadata": {"qualname": 3, "fullname": 6, "annotation": 7, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.dummy.DummyRunner.start_execution": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 68, "bases": 0, "doc": 19}, "styx.runners.dummy.DummyRunner.input_file": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 25, "bases": 0, "doc": 32}, "styx.runners.dummy.DummyRunner.run": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 30, "bases": 0, "doc": 28}, "styx.runners.dummy.DummyRunner.output_file": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 42, "bases": 0, "doc": 31}, "styx.runners.dummy.DummyRunner.finalize": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 14, "bases": 0, "doc": 19}, "styx.runners.local": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.styxdefs": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.styxdefs.P": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 2, "signature": 0, "bases": 0, "doc": 7}, "styx.runners.styxdefs.R": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 7}, "styx.runners.styxdefs.Execution": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 4, "doc": 20}, "styx.runners.styxdefs.Execution.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 18, "bases": 0, "doc": 3}, "styx.runners.styxdefs.Execution.input_file": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 28, "bases": 0, "doc": 32}, "styx.runners.styxdefs.Execution.run": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 30, "bases": 0, "doc": 28}, "styx.runners.styxdefs.Execution.output_file": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 44, "bases": 0, "doc": 31}, "styx.runners.styxdefs.Execution.finalize": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 14, "bases": 0, "doc": 19}, "styx.runners.styxdefs.Metadata": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 29}, "styx.runners.styxdefs.Metadata.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 130, "bases": 0, "doc": 22}, "styx.runners.styxdefs.Metadata.id": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 8}, "styx.runners.styxdefs.Metadata.name": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "styx.runners.styxdefs.Metadata.container_image_type": {"qualname": 4, "fullname": 7, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 10}, "styx.runners.styxdefs.Metadata.container_image_tag": {"qualname": 4, "fullname": 7, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 16}, "styx.runners.styxdefs.Metadata.container_image_index": {"qualname": 4, "fullname": 7, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 17}, "styx.runners.styxdefs.Metadata.container_image_opts": {"qualname": 4, "fullname": 7, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 10}, "styx.runners.styxdefs.Runner": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 4, "doc": 34}, "styx.runners.styxdefs.Runner.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 18, "bases": 0, "doc": 3}, "styx.runners.styxdefs.Runner.start_execution": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 73, "bases": 0, "doc": 19}}, "length": 379, "save": true}, "index": {"qualname": {"root": {"0": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1}, "5": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1}, "docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 10, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}}, "df": 2}, "2": {"docs": {"styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}}, "df": 2}, "3": {"docs": {"styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}}, "df": 4}, "4": {"docs": {"styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}}, "df": 14}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}}, "df": 6, "s": {"docs": {"styx.boutiques.model.Tool.tests": {"tf": 1}}, "df": 1}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}}, "df": 10}}}}}}, "x": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.PyGen.text": {"tf": 1}}, "df": 1}}}, "o": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 2, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 28}}}, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.Tool.tags": {"tf": 1}}, "df": 1}}}}, "d": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1}}, "df": 1}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}}, "df": 3}}}}}}}, "i": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}}, "df": 3}, "d": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}}, "df": 3}}}}}}}, "s": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}}, "df": 4}}}}}, "k": {"docs": {"styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}}, "df": 1}}, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}, "e": {"docs": {"styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 1}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}}, "df": 8}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 2}}}}}}}}, "f": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}}, "df": 4}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}, "s": {"docs": {"styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 2, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 4}}}}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}}, "df": 8}}}}}}}}}}}, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Type.singularity": {"tf": 1}}, "df": 1}}}}}}}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}}, "df": 2, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 2}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 6}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 1}}}}}}}}, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}}, "df": 3}}, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}}, "df": 2}}}}}}, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 2}}}}, "e": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}}, "df": 7}}}}}}}}, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 1, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}}, "df": 9}}}}}}}}}}}}}}}}}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}}, "df": 1}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 1}}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool.shell": {"tf": 1}}, "df": 1}}}}, "y": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}}, "df": 2}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}, "i": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 2}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 9, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}}, "df": 6}, "2": {"docs": {"styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}}, "df": 4}, "3": {"docs": {"styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}}, "df": 4}, "docs": {"styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"1": {"docs": {"styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}}, "df": 8}, "docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}}, "df": 11}}}}}}}}}}}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}}, "df": 20}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}}, "df": 2, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}}, "df": 5}}}}}}}}}}}}}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 20}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 1, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings.CompilerSettings": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 3}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 11}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.comment": {"tf": 1}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}}, "df": 1}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 1}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.collapse": {"tf": 1}}, "df": 1}}}}}}}, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}}, "df": 2}}}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}}, "df": 1}}, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.custom": {"tf": 1}}, "df": 1}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 2}}, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.python_camelize": {"tf": 1}}, "df": 1}}}}}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}}, "df": 1}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 1, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 60}}}}, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Group.members": {"tf": 1}}, "df": 1}}}}}, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 9}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}}, "df": 7}}}}}}, "a": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}}, "df": 7}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.main.main": {"tf": 1}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 6}}}, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.pycodegen.core.PyModule.imports": {"tf": 1}}, "df": 1}}}}}}, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 2}, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.INDENT": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}}, "df": 2}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"1": {"docs": {"styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}}, "df": 8, "s": {"1": {"docs": {"styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}}, "df": 28}, "docs": {"styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}}, "df": 31}}}}, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}}, "df": 3}}}}}, "v": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}}, "df": 2}}}}}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 10}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode.INLINE": {"tf": 1}}, "df": 1}}}}}, "d": {"docs": {"styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}}, "df": 6}, "s": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}}, "df": 4}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}}, "df": 1}}}}}}, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}}, "df": 4}}}}}, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.environment_variables": {"tf": 1}}, "df": 1, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}}, "df": 7}}}}}}}}}}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.compiler.core.BtType.is_enum": {"tf": 1}}, "df": 1}}, "s": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 3}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}}, "df": 1}}}}}, "b": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 1}}}}}}, "x": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}}, "df": 7}}}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}}, "df": 2}}}}}}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.core.BtInput.py_expr": {"tf": 1}}, "df": 1}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.core.expand": {"tf": 1}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 8}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 1}}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 1, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}}, "df": 6}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 2}, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 6}}}}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}}, "df": 1}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}, "y": {"docs": {"styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 1}}}, "r": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 3}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 3, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}}, "df": 6, "s": {"1": {"docs": {"styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}}, "df": 17}, "docs": {"styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}}, "df": 17}}}}}}}}}}}, "w": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}}, "df": 3}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 1}}}}}}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}}, "df": 3}}}, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.header": {"tf": 1}}, "df": 1}}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 40}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 11, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}}}}}}}, "s": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}}, "df": 1}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}}, "df": 2}}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 12}}, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyModule.funcs": {"tf": 1}}, "df": 1}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.footer": {"tf": 1}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.format.format_code": {"tf": 1}}, "df": 1}}}}}}, "r": {"docs": {"styx.runners.styxdefs.R": {"tf": 1}}, "df": 1, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 1, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type1.rootfs": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}}, "df": 1}, "s": {"docs": {"styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}}, "df": 4}}}}}}, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 1}}}}}}}, "f": {"docs": {"styx.compiler.core.BtInput.bt_ref": {"tf": 1}}, "df": 1}, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}}, "df": 2}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.SuggestedResources.ram": {"tf": 1}}, "df": 1}}, "u": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}}, "df": 2, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 3}}}}}}, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}}, "df": 3, "s": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 4}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}}, "df": 11}}}, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}}, "df": 1}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}}, "df": 1}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}}, "df": 3}}}}}}, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}}, "df": 13}}}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.environment_variables": {"tf": 1}}, "df": 1}}}}}}}}, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}}, "df": 2}}}}}}}, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}}, "df": 11, "s": {"docs": {"styx.boutiques.model.Tool.groups": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}}, "df": 3}}}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}}, "df": 1}}, "b": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 4}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.author": {"tf": 1}}, "df": 1}}}}}, "f": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyFunc.args": {"tf": 1}}, "df": 1}}}, "d": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 2}}, "s": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}}, "df": 16, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}}, "df": 2}}}}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 10, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.LineBuffer": {"tf": 1}}, "df": 1}}}}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 2}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 2}}}}}}}, "d": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}}, "df": 2}}}, "y": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}, "t": {"docs": {"styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 2, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}}, "df": 6}}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}}, "df": 6}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.core.BtInput": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 17}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "k": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}}, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}}, "df": 1}}}}}}, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}}, "df": 4}}}, "p": {"docs": {"styx.runners.styxdefs.P": {"tf": 1}}, "df": 1, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 10}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.scope.Scope.parent": {"tf": 1}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}}, "df": 1}}}}}}}}}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.primitive": {"tf": 1}}, "df": 1}}}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}}}}}, "y": {"docs": {"styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 6, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}}, "df": 3}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyArg": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}}, "df": 6}}}, "f": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {"styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}}, "df": 9}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyModule": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}}, "df": 7}}}}}}, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 5}}}}}}}}, "fullname": {"root": {"0": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1}, "5": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1}, "docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 10, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1}, "styx.boutiques.model": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}, "styx.boutiques.utils": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.cli": {"tf": 1}, "styx.compiler": {"tf": 1}, "styx.compiler.core": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.core.BtType": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.compiler.defs": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}, "styx.compiler.settings": {"tf": 1}, "styx.compiler.settings.DefsMode": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}, "styx.compiler.utils": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.main": {"tf": 1}, "styx.main.main": {"tf": 1}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}, "styx.pycodegen.core.LineBuffer": {"tf": 1}, "styx.pycodegen.core.INDENT": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}, "styx.pycodegen.core.PyArg": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}, "styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}, "styx.pycodegen.scope": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners": {"tf": 1}, "styx.runners.dummy": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.local": {"tf": 1}, "styx.runners.styxdefs": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 379, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.styxdefs": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 20}}}}}}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}}, "df": 3}}, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}}, "df": 2}}}}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 2}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Type.singularity": {"tf": 1}}, "df": 1}}}}}}}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}}, "df": 2, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 2}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.parent": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.python": {"tf": 1.4142135623730951}}, "df": 7}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 1}}}}}}}}, "e": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}}, "df": 7}}}}}}}, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings": {"tf": 1}, "styx.compiler.settings.DefsMode": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 8}}}}}}}, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 1, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}}, "df": 9}}}}}}}}}}}}}}}}}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}}, "df": 1}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 1}}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool.shell": {"tf": 1}}, "df": 1}}}}, "y": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}}, "df": 2}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}, "i": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 2}}}}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques": {"tf": 1}, "styx.boutiques.model": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}, "styx.boutiques.utils": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1.4142135623730951}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}}, "df": 246}}}}}}}, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}, "d": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}}, "df": 2}}}, "y": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}, "t": {"docs": {"styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 2, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}}, "df": 6}}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}}, "df": 6}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.core.BtInput": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 17}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "k": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}}, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}}, "df": 1}}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 1, "l": {"docs": {"styx.boutiques.model": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1.4142135623730951}}, "df": 242}}}}, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Group.members": {"tf": 1}}, "df": 1}}}}}, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 9}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}}, "df": 7}}}}}}, "a": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}}, "df": 7}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.main": {"tf": 1}, "styx.main.main": {"tf": 1.4142135623730951}}, "df": 2}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}}, "df": 2}, "2": {"docs": {"styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}}, "df": 2}, "3": {"docs": {"styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}}, "df": 4}, "4": {"docs": {"styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}}, "df": 14}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}}, "df": 6, "s": {"docs": {"styx.boutiques.model.Tool.tests": {"tf": 1}}, "df": 1}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}}, "df": 10}}}}}}, "x": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.PyGen.text": {"tf": 1}}, "df": 1}}}, "o": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 2, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 28}}}, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.Tool.tags": {"tf": 1}}, "df": 1}}}}, "d": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1}}, "df": 1}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}}, "df": 3}}}}}}}, "i": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}}, "df": 3}, "d": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}}, "df": 3}}}}}}}, "s": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}}, "df": 4}}}}}, "k": {"docs": {"styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}}, "df": 1}}, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}, "e": {"docs": {"styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 1}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}}, "df": 8}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 2}}}}}}}}, "f": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}}, "df": 4}}}}, "s": {"docs": {"styx.compiler.defs": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 4, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 4}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "y": {"docs": {"styx.runners.dummy": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}}, "df": 9, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}}, "df": 8}}}}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 9, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}}, "df": 6}, "2": {"docs": {"styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}}, "df": 4}, "3": {"docs": {"styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}}, "df": 4}, "docs": {"styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"1": {"docs": {"styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}}, "df": 8}, "docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}}, "df": 11}}}}}}}}}}}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}}, "df": 20}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}}, "df": 2, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}}, "df": 5}}}}}}}}}}}}}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 20}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 1, "r": {"docs": {"styx.compiler": {"tf": 1}, "styx.compiler.core": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.core.BtType": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.compiler.defs": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}, "styx.compiler.settings": {"tf": 1}, "styx.compiler.settings.DefsMode": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}, "styx.compiler.utils": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 44, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings.CompilerSettings": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 3}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 11}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.comment": {"tf": 1}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.core.BtType": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}, "styx.pycodegen.core.LineBuffer": {"tf": 1}, "styx.pycodegen.core.INDENT": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}, "styx.pycodegen.core.PyArg": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}}, "df": 65, "s": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}}, "df": 1}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 1}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.collapse": {"tf": 1}}, "df": 1}}}}}}}, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}}, "df": 2}}}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}}, "df": 1}}, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.custom": {"tf": 1}}, "df": 1}}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {"styx.cli": {"tf": 1}}, "df": 1}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 2}}, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.python_camelize": {"tf": 1}}, "df": 1}}}}}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}}, "df": 1}}}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 6}}}, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.pycodegen.core.PyModule.imports": {"tf": 1}}, "df": 1}}}}}}, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 2}, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.INDENT": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}}, "df": 2}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"1": {"docs": {"styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}}, "df": 8, "s": {"1": {"docs": {"styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}}, "df": 28}, "docs": {"styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}}, "df": 31}}}}, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}}, "df": 3}}}}}, "v": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}}, "df": 2}}}}}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 10}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode.INLINE": {"tf": 1}}, "df": 1}}}}}, "d": {"docs": {"styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}}, "df": 6}, "s": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}}, "df": 4}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}}, "df": 1}}}}}}, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}}, "df": 4}}}}}, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.environment_variables": {"tf": 1}}, "df": 1, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}}, "df": 7}}}}}}}}}}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.compiler.core.BtType.is_enum": {"tf": 1}}, "df": 1}}, "s": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 3}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}}, "df": 1}}}}}, "b": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 1}}}}}}, "x": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}}, "df": 7}}}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}}, "df": 2}}}}}}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.core.BtInput.py_expr": {"tf": 1}}, "df": 1}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.core.expand": {"tf": 1}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 8}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 1}}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 1, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}}, "df": 6}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 2}, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 6}}}}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}}, "df": 1}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}, "y": {"docs": {"styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 1}}}, "r": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 3}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 3, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}}, "df": 6, "s": {"1": {"docs": {"styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}}, "df": 17}, "docs": {"styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}}, "df": 17}}}}}}}}}}}, "w": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}}, "df": 3}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 1}}}}}}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}}, "df": 3}}}, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.header": {"tf": 1}}, "df": 1}}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 40}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 11, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}}}}}}}, "s": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}}, "df": 1}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}}, "df": 2}}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 12}}, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyModule.funcs": {"tf": 1}}, "df": 1}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.footer": {"tf": 1}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1.4142135623730951}}, "df": 2}}}}}}, "r": {"docs": {"styx.runners.styxdefs.R": {"tf": 1}}, "df": 1, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 1, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type1.rootfs": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}}, "df": 1}, "s": {"docs": {"styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}}, "df": 4}}}}}}, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 1}}}}}}}, "f": {"docs": {"styx.compiler.core.BtInput.bt_ref": {"tf": 1}}, "df": 1}, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}}, "df": 2}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.SuggestedResources.ram": {"tf": 1}}, "df": 1}}, "u": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}}, "df": 2, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 3, "s": {"docs": {"styx.runners": {"tf": 1}, "styx.runners.dummy": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.local": {"tf": 1}, "styx.runners.styxdefs": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 31}}}}}}}, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}}, "df": 3, "s": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 4}}}, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.utils": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.compiler.utils": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.pycodegen.utils": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 15}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}}, "df": 11}}}, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}}, "df": 1}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}}, "df": 1}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}}, "df": 3}}}}}}, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}}, "df": 13}}}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.environment_variables": {"tf": 1}}, "df": 1}}}}}}}}, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}}, "df": 2}}}}}}}, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}}, "df": 11, "s": {"docs": {"styx.boutiques.model.Tool.groups": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}}, "df": 3}}}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}}, "df": 1}}, "b": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 4}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.author": {"tf": 1}}, "df": 1}}}}}, "f": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyFunc.args": {"tf": 1}}, "df": 1}}}, "d": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 2}}, "s": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}}, "df": 16, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}}, "df": 2}}}}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 10, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.LineBuffer": {"tf": 1}}, "df": 1}}}}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 2}}}, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.runners.local": {"tf": 1}}, "df": 1}}}}}, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}}, "df": 4}}}, "p": {"docs": {"styx.runners.styxdefs.P": {"tf": 1}}, "df": 1, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 10}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.scope.Scope.parent": {"tf": 1}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}}, "df": 1}}}}}}}}}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.primitive": {"tf": 1}}, "df": 1}}}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}}}}}, "y": {"docs": {"styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 6, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}, "styx.pycodegen.core.LineBuffer": {"tf": 1}, "styx.pycodegen.core.INDENT": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}, "styx.pycodegen.core.PyArg": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}, "styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}, "styx.pycodegen.scope": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 54}}}}}}}, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}}, "df": 3}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyArg": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}}, "df": 6}}}, "f": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {"styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}}, "df": 9}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyModule": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}}, "df": 7}}}}}}, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 5}}}}}}}}, "annotation": {"root": {"0": {"docs": {"styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1.4142135623730951}}, "df": 9}, "1": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}}, "df": 33}, "9": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}}, "df": 7}, "docs": {"styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.description": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.author": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.shell": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.command_line": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1.4142135623730951}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1.4142135623730951}, "styx.compiler.core.BtInput.py_default": {"tf": 1.4142135623730951}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1.4142135623730951}}, "df": 173, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 12, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 1}}}}}}, "r": {"docs": {"styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 17, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}}}}}}}}}}, "p": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.schema_version": {"tf": 1}}, "df": 1}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope.Scope.parent": {"tf": 1.4142135623730951}}, "df": 1}}}}, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 1}}}}}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 21}}}}}}}, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}}, "df": 6}}}, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.primitive": {"tf": 1}}, "df": 1}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 21}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}, "a": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 1}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}}, "df": 1}, "2": {"docs": {"styx.boutiques.model.Input.type": {"tf": 1}}, "df": 1}, "3": {"docs": {"styx.boutiques.model.Input1.type": {"tf": 1}}, "df": 1}, "4": {"docs": {"styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}}, "df": 2}, "docs": {"styx.boutiques.model.ContainerImageItem.type": {"tf": 1}}, "df": 1}}}, "o": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.description": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.author": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.shell": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.command_line": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1.4142135623730951}}, "df": 32}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.tests": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 2}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}}, "df": 7, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}}, "df": 18}}}}}}}}}}}, "y": {"docs": {"styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}}, "df": 7}}}, "w": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}}}}}}}, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 2.449489742783178}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 2.23606797749979}, "styx.boutiques.model.Group.id": {"tf": 2.23606797749979}, "styx.boutiques.model.Group.name": {"tf": 2.449489742783178}, "styx.boutiques.model.Group.members": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs.id": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs.name": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.id": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1.name": {"tf": 2.449489742783178}, "styx.boutiques.model.Test.name": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.id": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles.name": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.id": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1.name": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 2.449489742783178}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 2.23606797749979}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 2.449489742783178}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 2.449489742783178}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 2.23606797749979}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.name": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.tool_version": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.description": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.author": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.url": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.doi": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.shell": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.tool_doi": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.command_line": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 2.449489742783178}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 51, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}}}}}}}}, "u": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}}, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}, "e": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 5, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.description": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.author": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.shell": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.command_line": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1.4142135623730951}}, "df": 32}}}}}, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Group.members": {"tf": 1}}, "df": 1}}}}}}}}}}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.Tool.inputs": {"tf": 1}}, "df": 1}}}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}}, "df": 6}, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}}, "df": 2}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}}, "df": 2}}}}}}}}, "t": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 5}}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}}}, "y": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}}, "df": 3}}}}}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyFunc.args": {"tf": 1}}, "df": 1}}}, "f": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {"styx.pycodegen.core.PyModule.funcs": {"tf": 1}}, "df": 1}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 22}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}}, "df": 11}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}}, "df": 2}}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 3}}}}}}}}}}}}}, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}}, "df": 7}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}}, "df": 10}, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 6}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}}, "df": 2}, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}}, "df": 1}}}}}}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}}, "df": 20}, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 7}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}}, "df": 7}}}}}}}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}}, "df": 8}}}}}}}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"1": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}}, "df": 1}}}}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"2": {"docs": {"styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 1}, "3": {"docs": {"styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Tool.container_image": {"tf": 1}}, "df": 1}}}}}}}}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}}, "df": 2}}}}}}}}}}}}}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 2}}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}}, "df": 3}}}}, "x": {"2": {"7": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1.4142135623730951}}, "df": 8}, "docs": {}, "df": 0}, "docs": {}, "df": 0}, "z": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}}, "df": 7, "]": {"docs": {}, "df": 0, "[": {"0": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0}}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}}, "df": 4}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFile1.file_template": {"tf": 1}}, "df": 1}}}}}}}}}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Test.invocation": {"tf": 1}}, "df": 1}}}}}}}, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 1}}}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}}, "df": 5, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 5}}}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"1": {"docs": {"styx.boutiques.model.Tool.inputs": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Tool.inputs": {"tf": 1}}, "df": 1}}}}}}, "g": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 5}, "e": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 5}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Tool.groups": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.environment_variables": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 1}}}}}}}}}, "h": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 1}}}}}}}}}, "default_value": {"root": {"0": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 9}, "1": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.1622776601683795}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}}, "df": 15}, "2": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.605551275463989}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 16}, "3": {"docs": {"styx.compiler.core.BtPrimitive.Integer": {"tf": 1}}, "df": 1}, "4": {"docs": {"styx.compiler.core.BtPrimitive.File": {"tf": 1}}, "df": 1}, "5": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}}, "df": 2}, "8": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}, "9": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}, "docs": {"styx.boutiques.model.Type.docker": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type.singularity": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 2}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 2}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 6}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.File": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 3.605551275463989}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1.4142135623730951}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1.4142135623730951}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1.4142135623730951}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1.4142135623730951}, "styx.pycodegen.core.INDENT": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.P": {"tf": 1}}, "df": 86, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 25}, "o": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12}}}, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 3}}}}, "l": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 1, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.7416573867739413}}, "df": 13}}}}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.23606797749979}}, "df": 6, "[": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}, "styx.pycodegen.core.LineBuffer": {"tf": 1}}, "df": 3}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}}, "df": 1}}}}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 5}, "k": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}}, "df": 3}, "2": {"docs": {"styx.boutiques.model.Type2.Flag": {"tf": 1}}, "df": 1}, "3": {"docs": {"styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}}, "df": 3}, "4": {"docs": {"styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 6}, "docs": {"styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.605551275463989}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 11, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}}, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2.6457513110645907}}, "df": 13}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 2}, "styx.boutiques.model.Group.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs.model_fields": {"tf": 5.385164807134504}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 5.385164807134504}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.358898943540674}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 16, "i": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}, "y": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "i": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}}, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}}, "o": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.872983346207417}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 14, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 4}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 8, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "k": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 2}}, "g": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Test.model_fields": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3}}, "df": 4}}}}}}}, "x": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "d": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 3, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}}}, "i": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2.8284271247461903}}, "df": 1}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Group.model_fields": {"tf": 3}, "styx.boutiques.model.Inputs.model_fields": {"tf": 5.0990195135927845}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 5.0990195135927845}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.47213595499958}}, "df": 15}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2.23606797749979}}, "df": 1}}}}, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3}, "d": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2}}, "df": 1}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}, "f": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 1, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 4, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 5}}}}}, "s": {"docs": {"styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 1, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 4}}}}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 1}, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}}, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}}}, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 7}}}}}}}, "s": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}}, "df": 2}, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}, "k": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Test.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 4}}}}, "x": {"2": {"7": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type.singularity": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 2}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.Type1.rootfs": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 2}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 2}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.Group.model_config": {"tf": 2}, "styx.boutiques.model.Group.model_fields": {"tf": 6}, "styx.boutiques.model.Type2.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.model_fields": {"tf": 2}, "styx.boutiques.model.Type3.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_config": {"tf": 2}, "styx.boutiques.model.Inputs.model_fields": {"tf": 11.313708498984761}, "styx.boutiques.model.Inputs1.model_config": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 11.313708498984761}, "styx.boutiques.model.Test.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 2}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 8.366600265340756}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 8.366600265340756}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 5.0990195135927845}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 2}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.Tool.model_config": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 10.392304845413264}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 10.099504938362077}, "styx.pycodegen.core.INDENT": {"tf": 1.4142135623730951}}, "df": 46}, "docs": {}, "df": 0}, "docs": {}, "df": 0}, "g": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1, "t": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 26}, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "b": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3}}}}}, "z": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}, "b": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Type.singularity": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}}}}, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 14, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Type3.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}}, "df": 8, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.4641016151377544}}, "df": 13}}}}}}}}}}}, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}, "p": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 2}}}}, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 1}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1}}}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2.23606797749979}}, "df": 1, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}}}}, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}, "u": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 5}}, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}}}}}}}}}, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}, "c": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}, "e": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 4}}}}}}}, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 5, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}, "f": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 1}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1}}}}}}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}}, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "c": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "y": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 1}}}}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1}}}}}, "y": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1, "x": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}}, "df": 12}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 2}}}}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.23606797749979}}, "df": 8, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 5}}}}}}, "c": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}}, "df": 3}}}}}}}, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 3.605551275463989}}, "df": 4, "[": {"docs": {}, "df": 0, "p": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 2}}}, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}}, "df": 2}}}}}, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 2}}}}}}}}}}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1, "d": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1}}}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 8, "b": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}}, "df": 12}}}, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.898979485566356}}, "df": 20}}}}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type3.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.8284271247461903}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 3.1622776601683795}}, "df": 10, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 1}}}}}}}}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 3}}}}, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 2}}}, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 1}}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.58257569495584}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.58257569495584}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.242640687119285}}, "df": 20}}}, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.449489742783178}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}}, "df": 9, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 5}}}, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 6}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}, "a": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 2}, "styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 9, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 8, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.898979485566356}}, "df": 20}}}}}}}}, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 10, "/": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}}}, "y": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 5}}, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 6}}}}}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2}, "styx.boutiques.model.Group.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs.model_fields": {"tf": 5.477225575051661}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 5.477225575051661}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 4}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 4}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.model_fields": {"tf": 5.0990195135927845}}, "df": 14}}}, "p": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}}}}}}}}}}, "l": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 2}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}}}}}}}, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 3}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 3}}}}, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2}}, "df": 3}}}}}}}}}}, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 3}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1}}}}}, "t": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 6}, "b": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 5}}}}}}}, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 5, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "f": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 1}}}}}, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.449489742783178}, "styx.runners.styxdefs.R": {"tf": 1}}, "df": 2, "e": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 3}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 5}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 5}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.898979485566356}}, "df": 20}, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}}, "df": 2}}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2}}, "df": 1}}}}}}}, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "s": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"1": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}, "docs": {}, "df": 0}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "l": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "p": {"docs": {}, "df": 0, "o": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type1.rootfs": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 2, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 6}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.449489742783178}}, "df": 1}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}}, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}}, "df": 1}}}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 10}, "n": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 7, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}}}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.242640687119285}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.242640687119285}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 7, "s": {"1": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.123105625617661}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.123105625617661}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 4}}}}, "v": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}}}, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}}}, "t": {"docs": {"styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}, "f": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}}, "df": 1}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}}, "df": 3}}}}}, "c": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 2}}}}}, "f": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 8}, "o": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}, "d": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}, "s": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.23606797749979}}, "df": 3}}, "t": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1, "e": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "f": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 11, "s": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 6}}}}, "o": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Group.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.Test.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.898979485566356}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}}, "df": 14, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.58257569495584}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.58257569495584}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 4.242640687119285}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.242640687119285}}, "df": 18}}}}}}, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 7}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type3.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}}, "df": 6}}}}}, "i": {"docs": {}, "df": 0, "i": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}, "o": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2, "f": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.605551275463989}}, "df": 12}, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 7}, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 6}}}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}, "n": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 7}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}}, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 2}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 4, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"1": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}, "docs": {}, "df": 0}}}}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"1": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0}}}}}}}}}}, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}, "b": {"docs": {}, "df": 0, "j": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 3, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 3}}}}}}}, "w": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}}, "df": 4}}}}, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}}, "df": 2}}, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12}}}}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 2}}}, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}}}}, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}}, "df": 1}}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 4}, "d": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}}, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 2, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 6}, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 6}}}}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}, "m": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 6, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}}}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 1}}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}}}}}}}}, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}}, "df": 2}}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}}, "df": 3}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 1}}, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 1}}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}, "b": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "n": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 2.23606797749979}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 8, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "t": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}}, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 3}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "y": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 6}, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3}}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}}, "df": 5}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.1622776601683795}}, "df": 13}}}}}}, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 3}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.1622776601683795}}, "df": 13, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}}, "df": 2}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2.449489742783178}}, "df": 4}}}}, "g": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3}}}}, "a": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}}, "df": 2}}}}}, "y": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 6}}, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 4}}, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}, "l": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}, "n": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}, "u": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12}}}}, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 7}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 2.6457513110645907}}, "df": 6}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}}}}}}}}}}}, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}}, "df": 7}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 7}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}}}}}}}}}}}}}}}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}}, "df": 6}}, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"2": {"docs": {"styx.boutiques.model.Input.model_fields": {"tf": 1}}, "df": 1}, "3": {"docs": {"styx.boutiques.model.Input1.model_fields": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 3}}}}}}}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}}, "df": 2}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}}}}}}}}, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 6}, "d": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 7}}}, "r": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 3, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}}, "p": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.P": {"tf": 1}}, "df": 2, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12}}}}, "h": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 6, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"1": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}, "docs": {}, "df": 0}}, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.605551275463989}}, "df": 14}}}}}, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "o": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}}, "df": 1}}}}, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}, "d": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "p": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}}}, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "y": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}}}, "s": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 1, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}, "v": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 7, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 7, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 3}}}}}, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2.449489742783178}}, "df": 1}}}}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 7.615773105863909}}, "df": 8}}}}, "z": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 6, "]": {"docs": {}, "df": 0, "[": {"0": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0}}}, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 5, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 3}}}}}}, "signature": {"root": {"0": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 1}, "1": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 3}, "3": {"9": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.enbrace": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.as_py_literal": {"tf": 2}}, "df": 3}, "docs": {}, "df": 0}, "docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 5.291502622129181}, "styx.boutiques.utils.boutiques_split_command": {"tf": 4.58257569495584}, "styx.compiler.core.BtType.__init__": {"tf": 7.211102550927978}, "styx.compiler.core.BtInput.__init__": {"tf": 6.782329983125268}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 6.708203932499369}, "styx.compiler.core.compile_descriptor": {"tf": 7.0710678118654755}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 6.6332495807108}, "styx.compiler.utils.optional_float_to_int": {"tf": 5.0990195135927845}, "styx.main.main": {"tf": 3}, "styx.pycodegen.core.indent": {"tf": 6.324555320336759}, "styx.pycodegen.core.comment": {"tf": 5.0990195135927845}, "styx.pycodegen.core.collapse": {"tf": 4.58257569495584}, "styx.pycodegen.core.expand": {"tf": 4.58257569495584}, "styx.pycodegen.core.blank_before": {"tf": 6.324555320336759}, "styx.pycodegen.core.blank_after": {"tf": 6.324555320336759}, "styx.pycodegen.core.PyGen.generate": {"tf": 4.123105625617661}, "styx.pycodegen.core.PyGen.text": {"tf": 3.4641016151377544}, "styx.pycodegen.core.PyArg.__init__": {"tf": 6.4031242374328485}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 9.539392014169456}, "styx.pycodegen.core.PyFunc.generate": {"tf": 4.123105625617661}, "styx.pycodegen.core.PyModule.__init__": {"tf": 10.954451150103322}, "styx.pycodegen.core.PyModule.generate": {"tf": 4.123105625617661}, "styx.pycodegen.format.format_code": {"tf": 4.58257569495584}, "styx.pycodegen.scope.Scope.__init__": {"tf": 5.916079783099616}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 4.47213595499958}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 4.47213595499958}, "styx.pycodegen.scope.Scope.python": {"tf": 4.898979485566356}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 4}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 4}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 4}, "styx.pycodegen.utils.python_camelize": {"tf": 4}, "styx.pycodegen.utils.python_snakify": {"tf": 4}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 4}, "styx.pycodegen.utils.enquote": {"tf": 5.656854249492381}, "styx.pycodegen.utils.enbrace": {"tf": 5.744562646538029}, "styx.pycodegen.utils.as_py_literal": {"tf": 9.746794344808963}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 7.483314773547883}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 4.47213595499958}, "styx.runners.dummy.DummyRunner.run": {"tf": 5}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 5.830951894845301}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 3.4641016151377544}, "styx.runners.styxdefs.Execution.__init__": {"tf": 4}, "styx.runners.styxdefs.Execution.input_file": {"tf": 4.795831523312719}, "styx.runners.styxdefs.Execution.run": {"tf": 5}, "styx.runners.styxdefs.Execution.output_file": {"tf": 6}, "styx.runners.styxdefs.Execution.finalize": {"tf": 3.4641016151377544}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 10.099504938362077}, "styx.runners.styxdefs.Runner.__init__": {"tf": 4}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 7.810249675906654}}, "df": 49, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}}, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyFunc.__init__": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 1}}}}}}}}, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 1, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.PyArg.__init__": {"tf": 1}}, "df": 1}}}}}}, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}}, "df": 2}}}}}}}}}, "s": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 2, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1.4142135623730951}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1.4142135623730951}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1.4142135623730951}}, "df": 12, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1.4142135623730951}}, "df": 2}}}}}}, "r": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1.4142135623730951}, "styx.pycodegen.core.comment": {"tf": 1.4142135623730951}, "styx.pycodegen.core.collapse": {"tf": 1.4142135623730951}, "styx.pycodegen.core.expand": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_before": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_after": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 2}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 2.23606797749979}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_camelize": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_snakify": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.enquote": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.enbrace": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.as_py_literal": {"tf": 2}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 2.449489742783178}}, "df": 36, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 5}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtInput.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.python": {"tf": 1.4142135623730951}}, "df": 3}}}}, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1.4142135623730951}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 2}}}}}}, "l": {"docs": {}, "df": 0, "f": {"docs": {"styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 16}}}, "y": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 2}}}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 3}}}}}}}, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.as_py_literal": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 4}}, "d": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.core.PyFunc.__init__": {"tf": 1.4142135623730951}}, "df": 1}}}, "t": {"docs": {"styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 2, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}}, "df": 1}}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 1}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}}}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 1}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 1, "l": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 3}}}}, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1.4142135623730951}}, "df": 2}}}}}}}}, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 2}}}, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 6}}}, "e": {"docs": {}, "df": 0, "x": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.expand": {"tf": 1}}, "df": 1}}}, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 1}}}}, "p": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 4, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 4}}, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.format.format_code": {"tf": 1}}, "df": 1}}, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 2}}, "df": 1}}}}}}}}, "l": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 2}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}}, "df": 2}}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1.4142135623730951}, "styx.pycodegen.core.comment": {"tf": 1.4142135623730951}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_after": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 2}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}}, "df": 17}}, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 5}}}}, "t": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 2}}, "df": 2}, "e": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}}, "df": 1}}}}, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 2}}}}}, "p": {"docs": {"styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 2, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}}, "df": 1}}}}}}}}, "y": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 5}}}}}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyFunc.__init__": {"tf": 1}}, "df": 1}}}, "f": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 1}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.scope.Scope.__init__": {"tf": 1}}, "df": 1}}}}}}, "i": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1.7320508075688772}}, "df": 1}, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.core.BtInput.__init__": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.compiler.core.BtInput.__init__": {"tf": 1}}, "df": 1}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 1}}}}, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1.4142135623730951}}, "df": 5}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "x": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 1}}}}}, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 2}}, "df": 1}}}}, "d": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 3}}}}}, "s": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}}, "b": {"docs": {}, "df": 0, "j": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 2}}}, "x": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 2}}}}}}}}}, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 1}}}}}}, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1.4142135623730951}, "styx.main.main": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1.4142135623730951}, "styx.pycodegen.format.format_code": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 2.8284271247461903}}, "df": 12}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 4}}}}, "g": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 2}}, "df": 2}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1.4142135623730951}}, "df": 2}}}}, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 2}}, "df": 1}}}}}, "l": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 2}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 1}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 4}}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 3}}}}, "r": {"docs": {"styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 2, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyFunc.__init__": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1.4142135623730951}}, "df": 2}}}}}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 1}}}}}, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}}, "df": 2}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 2, "e": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 2}}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "k": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 2}}}}}}}}, "bases": {"root": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}, "styx.compiler.settings.DefsMode": {"tf": 1.4142135623730951}}, "df": 10}}}, "x": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}}, "df": 1}}}}}}}}}}}}}, "p": {"docs": {"styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2, "y": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 15}}}}}}, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyModule": {"tf": 1}}, "df": 2}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2}}}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 15}}}}, "b": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 15}}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}}, "df": 2}, "docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"1": {"docs": {"styx.boutiques.model.ContainerImage3": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.ContainerImage2": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 4}}}}}}, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "~": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImage": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}}}}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"1": {"docs": {"styx.boutiques.model.Inputs1": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Inputs": {"tf": 1}}, "df": 1}}}}}, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.OutputFiles1": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.OutputFiles": {"tf": 1}}, "df": 1}}}}}}}}}}, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "c": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1.4142135623730951}}, "df": 1}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1.4142135623730951}}, "df": 1, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1.4142135623730951}}, "df": 1}}}}}}, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1.4142135623730951}}, "df": 1}}}, "r": {"docs": {"styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1.4142135623730951}}, "df": 1}, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}}, "df": 1}}}}}}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1}}}}}}}}}}}}, "doc": {"root": {"1": {"1": {"docs": {"styx": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Type": {"tf": 2.449489742783178}, "styx.boutiques.model.Type1": {"tf": 2.449489742783178}, "styx.boutiques.model.SchemaVersion": {"tf": 2.449489742783178}, "styx.boutiques.model.Type2": {"tf": 2.449489742783178}, "styx.boutiques.model.ListModel": {"tf": 2.449489742783178}, "styx.boutiques.model.Type3": {"tf": 2.449489742783178}, "styx.boutiques.model.Type4": {"tf": 2.449489742783178}, "styx.boutiques.model.FileTemplate": {"tf": 2.449489742783178}, "styx.compiler.core.BtPrimitive": {"tf": 2.449489742783178}}, "df": 9}, "2": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}, "3": {"9": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}, "docs": {"styx": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SchemaVersion": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ListModel": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4": {"tf": 1.7320508075688772}, "styx.boutiques.model.FileTemplate": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive": {"tf": 1.7320508075688772}}, "df": 10}, "6": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "/": {"docs": {}, "df": 0, "#": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImage": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}}}}}}}}}}}, "7": {"7": {"docs": {"styx": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0}, "docs": {"styx": {"tf": 10.488088481701515}, "styx.boutiques": {"tf": 3.1622776601683795}, "styx.boutiques.model": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type": {"tf": 14.798648586948742}, "styx.boutiques.model.Type.docker": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type.singularity": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem": {"tf": 11.874342087037917}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type1": {"tf": 14.798648586948742}, "styx.boutiques.model.Type1.rootfs": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 11.874342087037917}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 11.874342087037917}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 11.874342087037917}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 11.874342087037917}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage": {"tf": 6.4031242374328485}, "styx.boutiques.model.ContainerImage.root": {"tf": 1.7320508075688772}, "styx.boutiques.model.SchemaVersion": {"tf": 14.798648586948742}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 11.874342087037917}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 11.874342087037917}, "styx.boutiques.model.Group.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.id": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.members": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.one_is_required": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.all_or_none": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type2": {"tf": 14.798648586948742}, "styx.boutiques.model.Type2.Flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.ListModel": {"tf": 14.798648586948742}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 11.874342087037917}, "styx.boutiques.model.Input.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3": {"tf": 14.798648586948742}, "styx.boutiques.model.Type3.String": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3.File": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3.Number": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 11.874342087037917}, "styx.boutiques.model.Input1.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4": {"tf": 14.798648586948742}, "styx.boutiques.model.Type4.String": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4.File": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4.Flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4.Number": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 11.874342087037917}, "styx.boutiques.model.Inputs.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.id": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.value_key": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.optional": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.default_value": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.integer": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.minimum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.maximum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 11.874342087037917}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.id": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.optional": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.integer": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 11.874342087037917}, "styx.boutiques.model.Test.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test.invocation": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 11.874342087037917}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.FileTemplate": {"tf": 14.798648586948742}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 11.874342087037917}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 11.874342087037917}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 11.874342087037917}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 11.874342087037917}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 11.874342087037917}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 11.874342087037917}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode.code": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 11.874342087037917}, "styx.boutiques.model.Tool.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.author": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.url": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.doi": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.shell": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.command_line": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.container_image": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.schema_version": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.groups": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.tests": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.output_files": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.tags": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.error_codes": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.custom": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.utils": {"tf": 1.7320508075688772}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 4.898979485566356}, "styx.boutiques.utils.boutiques_split_command": {"tf": 4.898979485566356}, "styx.cli": {"tf": 1.7320508075688772}, "styx.compiler": {"tf": 1.7320508075688772}, "styx.compiler.core": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive": {"tf": 14.798648586948742}, "styx.compiler.core.BtPrimitive.String": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive.File": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType.__init__": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType.primitive": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType.is_list": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType.is_optional": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType.is_enum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.__init__": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.docstring": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.list_separator": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.minimum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.maximum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.py_type": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.py_default": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.py_expr": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1.7320508075688772}, "styx.compiler.core.compile_descriptor": {"tf": 1.7320508075688772}, "styx.compiler.defs": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}, "styx.compiler.settings": {"tf": 1.7320508075688772}, "styx.compiler.settings.DefsMode": {"tf": 1.7320508075688772}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1.7320508075688772}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1.7320508075688772}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1.7320508075688772}, "styx.compiler.settings.CompilerSettings": {"tf": 1.7320508075688772}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1.7320508075688772}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1.7320508075688772}, "styx.compiler.utils": {"tf": 1.7320508075688772}, "styx.compiler.utils.optional_float_to_int": {"tf": 1.7320508075688772}, "styx.main": {"tf": 1.7320508075688772}, "styx.main.main": {"tf": 1.7320508075688772}, "styx.pycodegen": {"tf": 1.7320508075688772}, "styx.pycodegen.core": {"tf": 1.7320508075688772}, "styx.pycodegen.core.LineBuffer": {"tf": 1.7320508075688772}, "styx.pycodegen.core.INDENT": {"tf": 1.7320508075688772}, "styx.pycodegen.core.indent": {"tf": 1.7320508075688772}, "styx.pycodegen.core.comment": {"tf": 1.7320508075688772}, "styx.pycodegen.core.collapse": {"tf": 1.7320508075688772}, "styx.pycodegen.core.expand": {"tf": 1.7320508075688772}, "styx.pycodegen.core.blank_before": {"tf": 1.7320508075688772}, "styx.pycodegen.core.blank_after": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyGen": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyGen.generate": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyGen.text": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg.name": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg.type": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg.default": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.name": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.args": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.body": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.imports": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.header": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.footer": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.generate": {"tf": 1.7320508075688772}, "styx.pycodegen.format": {"tf": 1.7320508075688772}, "styx.pycodegen.format.format_code": {"tf": 1.7320508075688772}, "styx.pycodegen.scope": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.parent": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.python": {"tf": 1.7320508075688772}, "styx.pycodegen.utils": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 4.898979485566356}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 5.0990195135927845}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 4.795831523312719}, "styx.pycodegen.utils.python_camelize": {"tf": 4.795831523312719}, "styx.pycodegen.utils.python_snakify": {"tf": 4.795831523312719}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 4.795831523312719}, "styx.pycodegen.utils.enquote": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.enbrace": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.as_py_literal": {"tf": 1.7320508075688772}, "styx.runners": {"tf": 1.7320508075688772}, "styx.runners.dummy": {"tf": 1.7320508075688772}, "styx.runners.dummy.DummyRunner": {"tf": 3.7416573867739413}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1.7320508075688772}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1.7320508075688772}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 3}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 3.4641016151377544}, "styx.runners.dummy.DummyRunner.run": {"tf": 3.4641016151377544}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 3.4641016151377544}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 3}, "styx.runners.local": {"tf": 1.7320508075688772}, "styx.runners.styxdefs": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.P": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.R": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Execution": {"tf": 3}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Execution.input_file": {"tf": 3.4641016151377544}, "styx.runners.styxdefs.Execution.run": {"tf": 3.4641016151377544}, "styx.runners.styxdefs.Execution.output_file": {"tf": 3.4641016151377544}, "styx.runners.styxdefs.Execution.finalize": {"tf": 3}, "styx.runners.styxdefs.Metadata": {"tf": 2.449489742783178}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata.id": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata.name": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Runner": {"tf": 3.7416573867739413}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 3}}, "df": 379, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.cli": {"tf": 1}}, "df": 3}}, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx": {"tf": 1.4142135623730951}, "styx.compiler.defs": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1.4142135623730951}}, "df": 3}}, "u": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 3}}}}}, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 5}}}, "r": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}}, "df": 2, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 2}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 2}, "styx.pycodegen.utils.python_camelize": {"tf": 2}, "styx.pycodegen.utils.python_snakify": {"tf": 2}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 2}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 11}}}, "u": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1}}}}}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 21, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}}}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 5}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 1}}}}}}}}, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}}}}}}}, "e": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}}, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 21, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings": {"tf": 1}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}}}, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.collapse": {"tf": 1}}, "df": 1}}, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}}, "df": 1}}}}}}}}}}, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 1}}}}, "y": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}}, "df": 3, "s": {"docs": {"styx.pycodegen.scope.Scope": {"tf": 1}}, "df": 1}}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 3}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 3, "r": {"docs": {"styx.compiler": {"tf": 1}, "styx.compiler.settings": {"tf": 1}, "styx.compiler.utils": {"tf": 1}}, "df": 3}, "d": {"docs": {"styx.compiler.defs": {"tf": 1}}, "df": 1}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.7320508075688772}, "styx.cli": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}}, "df": 6, "s": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 3}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.comment": {"tf": 1}}, "df": 1}}}}}, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}}, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 2}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 4}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 1}}}}}}}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 7, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 6}}, "s": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 5}}}}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.compiler.defs": {"tf": 1}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}, "styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 6, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1, "/": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}}}}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}}}, "a": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.collapse": {"tf": 1}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}}, "df": 1}}}}}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type": {"tf": 3.4641016151377544}, "styx.boutiques.model.Type1": {"tf": 3.4641016151377544}, "styx.boutiques.model.SchemaVersion": {"tf": 3.4641016151377544}, "styx.boutiques.model.Type2": {"tf": 3.4641016151377544}, "styx.boutiques.model.ListModel": {"tf": 3.4641016151377544}, "styx.boutiques.model.Type3": {"tf": 3.4641016151377544}, "styx.boutiques.model.Type4": {"tf": 3.4641016151377544}, "styx.boutiques.model.FileTemplate": {"tf": 3.4641016151377544}, "styx.compiler.core.BtPrimitive": {"tf": 3.4641016151377544}}, "df": 9}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}}, "df": 20}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 22}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 14, "d": {"docs": {"styx.boutiques": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}}, "df": 2}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 30, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SchemaVersion": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ListModel": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4": {"tf": 1.7320508075688772}, "styx.boutiques.model.FileTemplate": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 10}, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 5}}, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}}, "df": 2}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 10}}, "s": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 6}}}}}, "p": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques": {"tf": 1.4142135623730951}}, "df": 1, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1.4142135623730951}, "styx.compiler": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 9}}}}, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 4.358898943540674}, "styx.boutiques.model.ContainerImageItem1": {"tf": 4.358898943540674}, "styx.boutiques.model.ContainerImage1": {"tf": 4.358898943540674}, "styx.boutiques.model.ContainerImage2": {"tf": 4.358898943540674}, "styx.boutiques.model.ContainerImage3": {"tf": 4.358898943540674}, "styx.boutiques.model.ContainerImage": {"tf": 2.23606797749979}, "styx.boutiques.model.EnvironmentVariable": {"tf": 4.358898943540674}, "styx.boutiques.model.Group": {"tf": 4.358898943540674}, "styx.boutiques.model.Input": {"tf": 4.358898943540674}, "styx.boutiques.model.Input1": {"tf": 4.358898943540674}, "styx.boutiques.model.Inputs": {"tf": 4.358898943540674}, "styx.boutiques.model.Inputs1": {"tf": 4.358898943540674}, "styx.boutiques.model.Test": {"tf": 4.358898943540674}, "styx.boutiques.model.OutputFile": {"tf": 4.358898943540674}, "styx.boutiques.model.OutputFile1": {"tf": 4.358898943540674}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 4.358898943540674}, "styx.boutiques.model.OutputFiles": {"tf": 4.358898943540674}, "styx.boutiques.model.OutputFiles1": {"tf": 4.358898943540674}, "styx.boutiques.model.SuggestedResources": {"tf": 4.358898943540674}, "styx.boutiques.model.ErrorCode": {"tf": 4.358898943540674}, "styx.boutiques.model.Tool": {"tf": 4.358898943540674}}, "df": 22}}}}}}}, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}}, "df": 21}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 1}}}}}}}}, "o": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 1}}}}}}}, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "t": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 2}}, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2}}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 4}}}}}}}}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.cli": {"tf": 1}}, "df": 2, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 6}}}}}}, "s": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 10, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 1}}}}}}, "b": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 1}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}, "t": {"docs": {"styx.boutiques.model.Type": {"tf": 2.449489742783178}, "styx.boutiques.model.Type1": {"tf": 2.449489742783178}, "styx.boutiques.model.SchemaVersion": {"tf": 2.449489742783178}, "styx.boutiques.model.Type2": {"tf": 2.449489742783178}, "styx.boutiques.model.ListModel": {"tf": 2.449489742783178}, "styx.boutiques.model.Type3": {"tf": 2.449489742783178}, "styx.boutiques.model.Type4": {"tf": 2.449489742783178}, "styx.boutiques.model.FileTemplate": {"tf": 2.449489742783178}, "styx.compiler.core.BtPrimitive": {"tf": 2.449489742783178}}, "df": 9}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}}, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 4, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2}}}}}}}, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 1}}}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 2}}}, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}}}, "t": {"docs": {}, "df": 0, "o": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}, "styx.compiler": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_camelize": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_snakify": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 47, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 6}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}, "g": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1.4142135623730951}, "styx.compiler.defs": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}}, "df": 7, "s": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}}, "df": 2}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx": {"tf": 1}}, "df": 1, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 4.898979485566356}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 4.898979485566356}, "styx.boutiques.model.ContainerImage1": {"tf": 4.898979485566356}, "styx.boutiques.model.ContainerImage2": {"tf": 4.898979485566356}, "styx.boutiques.model.ContainerImage3": {"tf": 4.898979485566356}, "styx.boutiques.model.ContainerImage": {"tf": 2.6457513110645907}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 4.898979485566356}, "styx.boutiques.model.Group": {"tf": 4.898979485566356}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 4.898979485566356}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 4.898979485566356}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 4.898979485566356}, "styx.boutiques.model.Inputs1": {"tf": 4.898979485566356}, "styx.boutiques.model.Test": {"tf": 4.898979485566356}, "styx.boutiques.model.OutputFile": {"tf": 4.898979485566356}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 4.898979485566356}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 4.898979485566356}, "styx.boutiques.model.OutputFiles": {"tf": 4.898979485566356}, "styx.boutiques.model.OutputFiles1": {"tf": 4.898979485566356}, "styx.boutiques.model.SuggestedResources": {"tf": 4.898979485566356}, "styx.boutiques.model.ErrorCode": {"tf": 4.898979485566356}, "styx.boutiques.model.Tool": {"tf": 4.898979485566356}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1.4142135623730951}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_camelize": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_snakify": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 52, "m": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 10}, "y": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}, "i": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}, "i": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1.4142135623730951}}, "df": 21}}, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 3}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 4}}}}}, "w": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}, "y": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 1}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}}, "df": 21}}}}, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 2}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 21}}}, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2}}}}}, "f": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 22}}}, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx": {"tf": 1}}, "df": 1}}, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 2.449489742783178}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage1": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage2": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage3": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2.449489742783178}, "styx.boutiques.model.Group": {"tf": 2.449489742783178}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 2.449489742783178}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 2.449489742783178}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1": {"tf": 2.449489742783178}, "styx.boutiques.model.Test": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFile": {"tf": 2.449489742783178}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 2.449489742783178}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1": {"tf": 2.449489742783178}, "styx.boutiques.model.SuggestedResources": {"tf": 2.449489742783178}, "styx.boutiques.model.ErrorCode": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool": {"tf": 2.449489742783178}, "styx.cli": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 36, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 2}}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 10, "s": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 4}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 4}}}}}}, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}}, "df": 21}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}}, "df": 4}}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2}}}}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1.4142135623730951}, "styx.boutiques": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1.7320508075688772}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 6, "/": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}}, "df": 2}}}}}}}}, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "k": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}}, "y": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.defs": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}}, "df": 32}, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 32, "g": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}}, "df": 1}}}}}}}, "t": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 8}}}}}, "u": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 1}}}}}}}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 1}}}}}, "i": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "c": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 1}}}}}}}}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 2, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}}}, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "y": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}}, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}}, "v": {"docs": {}, "df": 0, "/": {"2": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}, "docs": {}, "df": 0}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}}, "df": 20}}, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings.DefsMode": {"tf": 1}}, "df": 1}}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs": {"tf": 1}}, "df": 1}}}}}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 2}}}}, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2}}}}}}}}}}, "o": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 10}}}}}}}}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 2, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2}}}}}}}}}}}, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 21, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode": {"tf": 1}}, "df": 1, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}}, "df": 1}}, "l": {"docs": {"styx.boutiques": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem": {"tf": 4}, "styx.boutiques.model.ContainerImageItem1": {"tf": 4}, "styx.boutiques.model.ContainerImage1": {"tf": 4}, "styx.boutiques.model.ContainerImage2": {"tf": 4}, "styx.boutiques.model.ContainerImage3": {"tf": 4}, "styx.boutiques.model.ContainerImage": {"tf": 2.449489742783178}, "styx.boutiques.model.EnvironmentVariable": {"tf": 4}, "styx.boutiques.model.Group": {"tf": 4}, "styx.boutiques.model.Input": {"tf": 4}, "styx.boutiques.model.Input1": {"tf": 4}, "styx.boutiques.model.Inputs": {"tf": 4}, "styx.boutiques.model.Inputs1": {"tf": 4}, "styx.boutiques.model.Test": {"tf": 4}, "styx.boutiques.model.OutputFile": {"tf": 4}, "styx.boutiques.model.OutputFile1": {"tf": 4}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 4}, "styx.boutiques.model.OutputFiles": {"tf": 4}, "styx.boutiques.model.OutputFiles1": {"tf": 4}, "styx.boutiques.model.SuggestedResources": {"tf": 4}, "styx.boutiques.model.ErrorCode": {"tf": 4}, "styx.boutiques.model.Tool": {"tf": 4}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1.7320508075688772}}, "df": 23, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}}, "df": 20}}}, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "s": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 1}}}}}}, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}, "styx.runners.styxdefs.Metadata": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 23}}}}}, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}}, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}, "y": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 4}}}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 23, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}}, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "r": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.cli": {"tf": 1}}, "df": 1}}}}}}, "o": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}}, "df": 3}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 9, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}, "j": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 21, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}}, "df": 20}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}}, "df": 1}}, "x": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 2}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 1}}}}}}}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 2}}}}}}}}}, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 2}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 4}}}}, "t": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 27}, "f": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 23}, "d": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.styxdefs.Metadata.id": {"tf": 1}}, "df": 1}}}}}}}}}, "o": {"docs": {"styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 1}}, "a": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1.4142135623730951}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1.4142135623730951}, "styx.pycodegen.core.comment": {"tf": 1.4142135623730951}, "styx.pycodegen.core.collapse": {"tf": 1.4142135623730951}, "styx.pycodegen.core.expand": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 60, "m": {"docs": {}, "df": 0, "p": {"docs": {"styx": {"tf": 1.4142135623730951}}, "df": 1}}, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.compiler.utils.optional_float_to_int": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 26, "d": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 39}, "y": {"docs": {"styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 2}}, "c": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}}}, "t": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 3, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 29, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 30}}}}}}}}}, "d": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 5, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}, "c": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 1}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 9}}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}}, "df": 5, "o": {"docs": {}, "df": 0, "w": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}, "v": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}}, "df": 1}}}}}}, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 1}}}}}}}}, "s": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2}, "f": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}}, "df": 8}}}}, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 1}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1}}, "df": 8, "s": {"docs": {"styx": {"tf": 1.4142135623730951}}, "df": 1}}}}}}, "f": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 3.1622776601683795}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImage1": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImage2": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImage3": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 3.1622776601683795}, "styx.boutiques.model.Group": {"tf": 3.1622776601683795}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 3.1622776601683795}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 3.1622776601683795}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 3.1622776601683795}, "styx.boutiques.model.Inputs1": {"tf": 3.1622776601683795}, "styx.boutiques.model.Test": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFile": {"tf": 3.1622776601683795}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 3.1622776601683795}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFiles": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFiles1": {"tf": 3.1622776601683795}, "styx.boutiques.model.SuggestedResources": {"tf": 3.1622776601683795}, "styx.boutiques.model.ErrorCode": {"tf": 3.1622776601683795}, "styx.boutiques.model.Tool": {"tf": 3.1622776601683795}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 38}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}, "w": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 22}, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "i": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "b": {"docs": {}, "df": 0, "j": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 5, "s": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2}}}}}}, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 2}}}}}, "s": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}}}, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1.4142135623730951}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 3}}}}}, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 22, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}}, "t": {"docs": {"styx.boutiques.model.Type": {"tf": 4.898979485566356}, "styx.boutiques.model.Type1": {"tf": 4.898979485566356}, "styx.boutiques.model.SchemaVersion": {"tf": 4.898979485566356}, "styx.boutiques.model.Type2": {"tf": 4.898979485566356}, "styx.boutiques.model.ListModel": {"tf": 4.898979485566356}, "styx.boutiques.model.Type3": {"tf": 4.898979485566356}, "styx.boutiques.model.Type4": {"tf": 4.898979485566356}, "styx.boutiques.model.FileTemplate": {"tf": 4.898979485566356}, "styx.compiler.core.BtPrimitive": {"tf": 4.898979485566356}}, "df": 9}, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "x": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.finalize": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.finalize": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1.4142135623730951}}, "df": 15}}}, "e": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 3}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.runners": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 14, "s": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2}}}}}}, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}}, "df": 21}}}, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.core.expand": {"tf": 1}}, "df": 1}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}}}}, "n": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx": {"tf": 1}}, "df": 1, "s": {"docs": {"styx": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 2}}}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}}}}}}}}, "d": {"docs": {"styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 1}, "s": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}}, "df": 1}}}}}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}}}, "v": {"1": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}, "2": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1}}, "df": 2}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}}, "df": 1, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 6, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.compiler.settings.DefsMode": {"tf": 1}}, "df": 2}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 7, "s": {"docs": {"styx.runners": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 2}}}}}, "f": {"docs": {}, "df": 0, "f": {"docs": {"styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 2}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Type": {"tf": 2.6457513110645907}, "styx.boutiques.model.Type1": {"tf": 2.6457513110645907}, "styx.boutiques.model.SchemaVersion": {"tf": 2.6457513110645907}, "styx.boutiques.model.Type2": {"tf": 2.6457513110645907}, "styx.boutiques.model.ListModel": {"tf": 2.6457513110645907}, "styx.boutiques.model.Type3": {"tf": 2.6457513110645907}, "styx.boutiques.model.Type4": {"tf": 2.6457513110645907}, "styx.boutiques.model.FileTemplate": {"tf": 2.6457513110645907}, "styx.compiler.core.BtPrimitive": {"tf": 2.6457513110645907}}, "df": 9}, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}}, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 12}}}}}, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 4}}}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage": {"tf": 2.23606797749979}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 21, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}}}}}}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx": {"tf": 1}}, "df": 1}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata.id": {"tf": 1}}, "df": 1}}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}}}}}}, "s": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}}}, "e": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage1": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage2": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage3": {"tf": 2.23606797749979}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2.23606797749979}, "styx.boutiques.model.Group": {"tf": 2.23606797749979}, "styx.boutiques.model.Input": {"tf": 2.23606797749979}, "styx.boutiques.model.Input1": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1": {"tf": 2.23606797749979}, "styx.boutiques.model.Test": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFile": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFile1": {"tf": 2.23606797749979}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1": {"tf": 2.23606797749979}, "styx.boutiques.model.SuggestedResources": {"tf": 2.23606797749979}, "styx.boutiques.model.ErrorCode": {"tf": 2.23606797749979}, "styx.boutiques.model.Tool": {"tf": 2.23606797749979}, "styx.compiler.defs": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1.4142135623730951}}, "df": 24}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 3}}}}, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.utils": {"tf": 1}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 3}}}}}}}}, "p": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}}}}}, "n": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx": {"tf": 1}}, "df": 1, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 34, "/": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}}}}, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 4}}, "e": {"docs": {}, "df": 0, "w": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "h": {"docs": {"styx": {"tf": 1}}, "df": 1}}, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}, "o": {"docs": {}, "df": 0, "w": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 6}}}, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, ":": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}}}}}}}}}}}, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 1}}}}}}, "j": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}}}}}, "k": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "w": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9, "n": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 1}}}}}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}}, "df": 1}}}}}}}}}, "pipeline": ["trimmer"], "_isPrebuiltIndex": true}; + /** pdoc search index */const docs = {"version": "0.9.5", "fields": ["qualname", "fullname", "annotation", "default_value", "signature", "bases", "doc"], "ref": "fullname", "documentStore": {"docs": {"styx": {"fullname": "styx", "modulename": "styx", "kind": "module", "doc": "

Styx

\n\n

\n \n

\n\n

\"Build\"\n\"codecov\"\n\"Ruff\"\n\"stability-wip\"\n\"MIT\n\"pages\"

\n\n

Compile Python command line tool wrappers from Boutiques descriptors.

\n\n

Features

\n\n
    \n
  • Target modern Python (3.11+)
    • \n
  • Intellisense & full static type checking for inputs and outputs
    • \n
  • Documentation generation
    • \n
  • Custom execution environments via dependency injection
    • \n
  • Runtime input validation
    • \n
  • Integration test generation
    • \n
  • Default runners\n
      \n
    • Local
      • \n
    • Docker
      • \n
    • Singularity
      • \n
    • \n
\n\n

Boutiques descriptor implementation status: 77%

\n\n
    \n
  • Documentation
    • \n
  • Types (String, Numerical, File)
    • \n
  • Flags
    • \n
  • Lists
    • \n
  • Enums
    • \n
  • Constraints (Numeric ranges, Groups)
    • \n
  • (Conditional) outputs
    • \n
  • Static metadata (Hash, name, container environment)
    • \n
  • Tests
    • \n
\n"}, "styx.boutiques": {"fullname": "styx.boutiques", "modulename": "styx.boutiques", "kind": "module", "doc": "

Boutiques.

\n\n

model.py was created via the following command:

\n\n
datamodel-codegen     --input boutiques/tools/python/boutiques/schema/descriptor.schema.json     --input-file-type jsonschema     --output src/boutiques-codegen/model.py     --output-model-type pydantic_v2.BaseModel\n
\n"}, "styx.boutiques.model": {"fullname": "styx.boutiques.model", "modulename": "styx.boutiques.model", "kind": "module", "doc": "

\n"}, "styx.boutiques.model.Type": {"fullname": "styx.boutiques.model.Type", "modulename": "styx.boutiques.model", "qualname": "Type", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.Type.docker": {"fullname": "styx.boutiques.model.Type.docker", "modulename": "styx.boutiques.model", "qualname": "Type.docker", "kind": "variable", "doc": "

\n", "default_value": "<Type.docker: 'docker'>"}, "styx.boutiques.model.Type.singularity": {"fullname": "styx.boutiques.model.Type.singularity", "modulename": "styx.boutiques.model", "qualname": "Type.singularity", "kind": "variable", "doc": "

\n", "default_value": "<Type.singularity: 'singularity'>"}, "styx.boutiques.model.ContainerImageItem": {"fullname": "styx.boutiques.model.ContainerImageItem", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.ContainerImageItem.model_config": {"fullname": "styx.boutiques.model.ContainerImageItem.model_config", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.ContainerImageItem.type": {"fullname": "styx.boutiques.model.ContainerImageItem.type", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.type", "kind": "variable", "doc": "

\n", "annotation": ": styx.boutiques.model.Type"}, "styx.boutiques.model.ContainerImageItem.image": {"fullname": "styx.boutiques.model.ContainerImageItem.image", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.image", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"fullname": "styx.boutiques.model.ContainerImageItem.entrypoint", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.entrypoint", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.ContainerImageItem.index": {"fullname": "styx.boutiques.model.ContainerImageItem.index", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.index", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.ContainerImageItem.container_opts": {"fullname": "styx.boutiques.model.ContainerImageItem.container_opts", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.container_opts", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.ContainerImageItem.working_directory": {"fullname": "styx.boutiques.model.ContainerImageItem.working_directory", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.working_directory", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.ContainerImageItem.container_hash": {"fullname": "styx.boutiques.model.ContainerImageItem.container_hash", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.container_hash", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.ContainerImageItem.model_fields": {"fullname": "styx.boutiques.model.ContainerImageItem.model_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Type, required=True), 'image': FieldInfo(annotation=str, required=True, description='Name of an image where the tool is installed and configured. Example: bids/mriqc.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'entrypoint': FieldInfo(annotation=Union[bool, NoneType], required=False, description='Flag indicating whether or not the container uses an entrypoint.'), 'index': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='Optional index where the image is available, if not the standard location. Example: docker.io'), 'container_opts': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='container-opts', alias_priority=2, description='Container-level arguments for the application. Example: --privileged'), 'working_directory': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='working-directory', alias_priority=2), 'container_hash': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='container-hash', alias_priority=2)}"}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"fullname": "styx.boutiques.model.ContainerImageItem.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Type1": {"fullname": "styx.boutiques.model.Type1", "modulename": "styx.boutiques.model", "qualname": "Type1", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.Type1.rootfs": {"fullname": "styx.boutiques.model.Type1.rootfs", "modulename": "styx.boutiques.model", "qualname": "Type1.rootfs", "kind": "variable", "doc": "

\n", "default_value": "<Type1.rootfs: 'rootfs'>"}, "styx.boutiques.model.ContainerImageItem1": {"fullname": "styx.boutiques.model.ContainerImageItem1", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.ContainerImageItem1.model_config": {"fullname": "styx.boutiques.model.ContainerImageItem1.model_config", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.ContainerImageItem1.type": {"fullname": "styx.boutiques.model.ContainerImageItem1.type", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.type", "kind": "variable", "doc": "

\n", "annotation": ": styx.boutiques.model.Type1"}, "styx.boutiques.model.ContainerImageItem1.url": {"fullname": "styx.boutiques.model.ContainerImageItem1.url", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.url", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"fullname": "styx.boutiques.model.ContainerImageItem1.working_directory", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.working_directory", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"fullname": "styx.boutiques.model.ContainerImageItem1.container_hash", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.container_hash", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"fullname": "styx.boutiques.model.ContainerImageItem1.model_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Type1, required=True), 'url': FieldInfo(annotation=str, required=True, description='URL where the image is available.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'working_directory': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='working-directory', alias_priority=2), 'container_hash': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='container-hash', alias_priority=2)}"}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"fullname": "styx.boutiques.model.ContainerImageItem1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImageItem1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ContainerImage1": {"fullname": "styx.boutiques.model.ContainerImage1", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.ContainerImage1.working_directory": {"fullname": "styx.boutiques.model.ContainerImage1.working_directory", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1.working_directory", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.ContainerImage1.container_hash": {"fullname": "styx.boutiques.model.ContainerImage1.container_hash", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1.container_hash", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.ContainerImage1.model_config": {"fullname": "styx.boutiques.model.ContainerImage1.model_config", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ContainerImage1.model_fields": {"fullname": "styx.boutiques.model.ContainerImage1.model_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'working_directory': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='working-directory', alias_priority=2, description='Location from which this task must be launched within the container.'), 'container_hash': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='container-hash', alias_priority=2, description='Hash for the given container.')}"}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"fullname": "styx.boutiques.model.ContainerImage1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ContainerImage2": {"fullname": "styx.boutiques.model.ContainerImage2", "modulename": "styx.boutiques.model", "qualname": "ContainerImage2", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "ContainerImageItem, ContainerImage1"}, "styx.boutiques.model.ContainerImage2.model_config": {"fullname": "styx.boutiques.model.ContainerImage2.model_config", "modulename": "styx.boutiques.model", "qualname": "ContainerImage2.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.ContainerImage2.model_fields": {"fullname": "styx.boutiques.model.ContainerImage2.model_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage2.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'working_directory': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='working-directory', alias_priority=2), 'container_hash': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='container-hash', alias_priority=2), 'type': FieldInfo(annotation=Type, required=True), 'image': FieldInfo(annotation=str, required=True, description='Name of an image where the tool is installed and configured. Example: bids/mriqc.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'entrypoint': FieldInfo(annotation=Union[bool, NoneType], required=False, description='Flag indicating whether or not the container uses an entrypoint.'), 'index': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='Optional index where the image is available, if not the standard location. Example: docker.io'), 'container_opts': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='container-opts', alias_priority=2, description='Container-level arguments for the application. Example: --privileged')}"}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"fullname": "styx.boutiques.model.ContainerImage2.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage2.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ContainerImage3": {"fullname": "styx.boutiques.model.ContainerImage3", "modulename": "styx.boutiques.model", "qualname": "ContainerImage3", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "ContainerImageItem1, ContainerImage1"}, "styx.boutiques.model.ContainerImage3.model_config": {"fullname": "styx.boutiques.model.ContainerImage3.model_config", "modulename": "styx.boutiques.model", "qualname": "ContainerImage3.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.ContainerImage3.model_fields": {"fullname": "styx.boutiques.model.ContainerImage3.model_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage3.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'working_directory': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='working-directory', alias_priority=2), 'container_hash': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='container-hash', alias_priority=2), 'type': FieldInfo(annotation=Type1, required=True), 'url': FieldInfo(annotation=str, required=True, description='URL where the image is available.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)])}"}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"fullname": "styx.boutiques.model.ContainerImage3.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ContainerImage3.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ContainerImage": {"fullname": "styx.boutiques.model.ContainerImage", "modulename": "styx.boutiques.model", "qualname": "ContainerImage", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/#rootmodel-and-custom-root-types

\n\n

A Pydantic BaseModel for the root object of the model.

\n\n
Attributes:
\n\n
    \n
  • root: The root object of the model.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_private__: Private fields in the model.
    • \n
  • __pydantic_extra__: Extra fields in the model.
    • \n
\n", "bases": "pydantic.main.BaseModel, typing.Generic[~RootModelRootType]"}, "styx.boutiques.model.ContainerImage.root": {"fullname": "styx.boutiques.model.ContainerImage.root", "modulename": "styx.boutiques.model", "qualname": "ContainerImage.root", "kind": "variable", "doc": "

\n", "annotation": ": Union[styx.boutiques.model.ContainerImage2, styx.boutiques.model.ContainerImage3]"}, "styx.boutiques.model.SchemaVersion": {"fullname": "styx.boutiques.model.SchemaVersion", "modulename": "styx.boutiques.model", "qualname": "SchemaVersion", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.SchemaVersion.field_0_5": {"fullname": "styx.boutiques.model.SchemaVersion.field_0_5", "modulename": "styx.boutiques.model", "qualname": "SchemaVersion.field_0_5", "kind": "variable", "doc": "

\n", "default_value": "<SchemaVersion.field_0_5: '0.5'>"}, "styx.boutiques.model.EnvironmentVariable": {"fullname": "styx.boutiques.model.EnvironmentVariable", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.EnvironmentVariable.model_config": {"fullname": "styx.boutiques.model.EnvironmentVariable.model_config", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.EnvironmentVariable.name": {"fullname": "styx.boutiques.model.EnvironmentVariable.name", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[a-z,A-Z][0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.EnvironmentVariable.value": {"fullname": "styx.boutiques.model.EnvironmentVariable.value", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.value", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.boutiques.model.EnvironmentVariable.description": {"fullname": "styx.boutiques.model.EnvironmentVariable.description", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"fullname": "styx.boutiques.model.EnvironmentVariable.model_fields", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'name': FieldInfo(annotation=str, required=True, description='The environment variable name (identifier) containing only alphanumeric characters and underscores. Example: "PROGRAM_PATH".', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[a-z,A-Z][0-9,_,a-z,A-Z]*$')]), 'value': FieldInfo(annotation=str, required=True, description='The value of the environment variable.'), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Description of the environment variable.')}"}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"fullname": "styx.boutiques.model.EnvironmentVariable.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "EnvironmentVariable.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Group": {"fullname": "styx.boutiques.model.Group", "modulename": "styx.boutiques.model", "qualname": "Group", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.Group.model_config": {"fullname": "styx.boutiques.model.Group.model_config", "modulename": "styx.boutiques.model", "qualname": "Group.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.Group.id": {"fullname": "styx.boutiques.model.Group.id", "modulename": "styx.boutiques.model", "qualname": "Group.id", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.Group.name": {"fullname": "styx.boutiques.model.Group.name", "modulename": "styx.boutiques.model", "qualname": "Group.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Group.description": {"fullname": "styx.boutiques.model.Group.description", "modulename": "styx.boutiques.model", "qualname": "Group.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Group.members": {"fullname": "styx.boutiques.model.Group.members", "modulename": "styx.boutiques.model", "qualname": "Group.members", "kind": "variable", "doc": "

\n", "annotation": ": List[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]]"}, "styx.boutiques.model.Group.mutually_exclusive": {"fullname": "styx.boutiques.model.Group.mutually_exclusive", "modulename": "styx.boutiques.model", "qualname": "Group.mutually_exclusive", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Group.one_is_required": {"fullname": "styx.boutiques.model.Group.one_is_required", "modulename": "styx.boutiques.model", "qualname": "Group.one_is_required", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Group.all_or_none": {"fullname": "styx.boutiques.model.Group.all_or_none", "modulename": "styx.boutiques.model", "qualname": "Group.all_or_none", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Group.model_fields": {"fullname": "styx.boutiques.model.Group.model_fields", "modulename": "styx.boutiques.model", "qualname": "Group.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'id': FieldInfo(annotation=str, required=True, description='A short, unique, informative identifier containing only alphanumeric characters and underscores. Typically used to generate variable names. Example: "outfile_group".', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]), 'name': FieldInfo(annotation=str, required=True, description='A human-readable name for the input group.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Description of the input group.'), 'members': FieldInfo(annotation=List[Annotated[str, StringConstraints]], required=True, description='IDs of the inputs belonging to this group.'), 'mutually_exclusive': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='mutually-exclusive', alias_priority=2, description='True if only one input in the group may be active at runtime.'), 'one_is_required': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='one-is-required', alias_priority=2, description='True if at least one of the inputs in the group must be active at runtime.'), 'all_or_none': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='all-or-none', alias_priority=2, description='True if members of the group need to be toggled together')}"}, "styx.boutiques.model.Group.model_computed_fields": {"fullname": "styx.boutiques.model.Group.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Group.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Type2": {"fullname": "styx.boutiques.model.Type2", "modulename": "styx.boutiques.model", "qualname": "Type2", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.Type2.Flag": {"fullname": "styx.boutiques.model.Type2.Flag", "modulename": "styx.boutiques.model", "qualname": "Type2.Flag", "kind": "variable", "doc": "

\n", "default_value": "<Type2.Flag: 'Flag'>"}, "styx.boutiques.model.ListModel": {"fullname": "styx.boutiques.model.ListModel", "modulename": "styx.boutiques.model", "qualname": "ListModel", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.ListModel.bool_False": {"fullname": "styx.boutiques.model.ListModel.bool_False", "modulename": "styx.boutiques.model", "qualname": "ListModel.bool_False", "kind": "variable", "doc": "

\n", "default_value": "<ListModel.bool_False: False>"}, "styx.boutiques.model.Input": {"fullname": "styx.boutiques.model.Input", "modulename": "styx.boutiques.model", "qualname": "Input", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.Input.type": {"fullname": "styx.boutiques.model.Input.type", "modulename": "styx.boutiques.model", "qualname": "Input.type", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.Type2]"}, "styx.boutiques.model.Input.list": {"fullname": "styx.boutiques.model.Input.list", "modulename": "styx.boutiques.model", "qualname": "Input.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.ListModel]"}, "styx.boutiques.model.Input.model_config": {"fullname": "styx.boutiques.model.Input.model_config", "modulename": "styx.boutiques.model", "qualname": "Input.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Input.model_fields": {"fullname": "styx.boutiques.model.Input.model_fields", "modulename": "styx.boutiques.model", "qualname": "Input.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Union[Type2, NoneType], required=False), 'list': FieldInfo(annotation=Union[ListModel, NoneType], required=False)}"}, "styx.boutiques.model.Input.model_computed_fields": {"fullname": "styx.boutiques.model.Input.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Input.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Type3": {"fullname": "styx.boutiques.model.Type3", "modulename": "styx.boutiques.model", "qualname": "Type3", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.Type3.String": {"fullname": "styx.boutiques.model.Type3.String", "modulename": "styx.boutiques.model", "qualname": "Type3.String", "kind": "variable", "doc": "

\n", "default_value": "<Type3.String: 'String'>"}, "styx.boutiques.model.Type3.File": {"fullname": "styx.boutiques.model.Type3.File", "modulename": "styx.boutiques.model", "qualname": "Type3.File", "kind": "variable", "doc": "

\n", "default_value": "<Type3.File: 'File'>"}, "styx.boutiques.model.Type3.Number": {"fullname": "styx.boutiques.model.Type3.Number", "modulename": "styx.boutiques.model", "qualname": "Type3.Number", "kind": "variable", "doc": "

\n", "default_value": "<Type3.Number: 'Number'>"}, "styx.boutiques.model.Input1": {"fullname": "styx.boutiques.model.Input1", "modulename": "styx.boutiques.model", "qualname": "Input1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.Input1.type": {"fullname": "styx.boutiques.model.Input1.type", "modulename": "styx.boutiques.model", "qualname": "Input1.type", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.Type3]"}, "styx.boutiques.model.Input1.model_config": {"fullname": "styx.boutiques.model.Input1.model_config", "modulename": "styx.boutiques.model", "qualname": "Input1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Input1.model_fields": {"fullname": "styx.boutiques.model.Input1.model_fields", "modulename": "styx.boutiques.model", "qualname": "Input1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Union[Type3, NoneType], required=False)}"}, "styx.boutiques.model.Input1.model_computed_fields": {"fullname": "styx.boutiques.model.Input1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Input1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Type4": {"fullname": "styx.boutiques.model.Type4", "modulename": "styx.boutiques.model", "qualname": "Type4", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.Type4.String": {"fullname": "styx.boutiques.model.Type4.String", "modulename": "styx.boutiques.model", "qualname": "Type4.String", "kind": "variable", "doc": "

\n", "default_value": "<Type4.String: 'String'>"}, "styx.boutiques.model.Type4.File": {"fullname": "styx.boutiques.model.Type4.File", "modulename": "styx.boutiques.model", "qualname": "Type4.File", "kind": "variable", "doc": "

\n", "default_value": "<Type4.File: 'File'>"}, "styx.boutiques.model.Type4.Flag": {"fullname": "styx.boutiques.model.Type4.Flag", "modulename": "styx.boutiques.model", "qualname": "Type4.Flag", "kind": "variable", "doc": "

\n", "default_value": "<Type4.Flag: 'Flag'>"}, "styx.boutiques.model.Type4.Number": {"fullname": "styx.boutiques.model.Type4.Number", "modulename": "styx.boutiques.model", "qualname": "Type4.Number", "kind": "variable", "doc": "

\n", "default_value": "<Type4.Number: 'Number'>"}, "styx.boutiques.model.Inputs": {"fullname": "styx.boutiques.model.Inputs", "modulename": "styx.boutiques.model", "qualname": "Inputs", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "Input"}, "styx.boutiques.model.Inputs.model_config": {"fullname": "styx.boutiques.model.Inputs.model_config", "modulename": "styx.boutiques.model", "qualname": "Inputs.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.Inputs.id": {"fullname": "styx.boutiques.model.Inputs.id", "modulename": "styx.boutiques.model", "qualname": "Inputs.id", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.Inputs.name": {"fullname": "styx.boutiques.model.Inputs.name", "modulename": "styx.boutiques.model", "qualname": "Inputs.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Inputs.type": {"fullname": "styx.boutiques.model.Inputs.type", "modulename": "styx.boutiques.model", "qualname": "Inputs.type", "kind": "variable", "doc": "

\n", "annotation": ": styx.boutiques.model.Type4"}, "styx.boutiques.model.Inputs.description": {"fullname": "styx.boutiques.model.Inputs.description", "modulename": "styx.boutiques.model", "qualname": "Inputs.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs.value_key": {"fullname": "styx.boutiques.model.Inputs.value_key", "modulename": "styx.boutiques.model", "qualname": "Inputs.value_key", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs.list": {"fullname": "styx.boutiques.model.Inputs.list", "modulename": "styx.boutiques.model", "qualname": "Inputs.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.list_separator": {"fullname": "styx.boutiques.model.Inputs.list_separator", "modulename": "styx.boutiques.model", "qualname": "Inputs.list_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs.optional": {"fullname": "styx.boutiques.model.Inputs.optional", "modulename": "styx.boutiques.model", "qualname": "Inputs.optional", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.command_line_flag": {"fullname": "styx.boutiques.model.Inputs.command_line_flag", "modulename": "styx.boutiques.model", "qualname": "Inputs.command_line_flag", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs.requires_inputs": {"fullname": "styx.boutiques.model.Inputs.requires_inputs", "modulename": "styx.boutiques.model", "qualname": "Inputs.requires_inputs", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.Inputs.disables_inputs": {"fullname": "styx.boutiques.model.Inputs.disables_inputs", "modulename": "styx.boutiques.model", "qualname": "Inputs.disables_inputs", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"fullname": "styx.boutiques.model.Inputs.command_line_flag_separator", "modulename": "styx.boutiques.model", "qualname": "Inputs.command_line_flag_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs.default_value": {"fullname": "styx.boutiques.model.Inputs.default_value", "modulename": "styx.boutiques.model", "qualname": "Inputs.default_value", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.Inputs.value_choices": {"fullname": "styx.boutiques.model.Inputs.value_choices", "modulename": "styx.boutiques.model", "qualname": "Inputs.value_choices", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[Union[str, float]]]"}, "styx.boutiques.model.Inputs.value_requires": {"fullname": "styx.boutiques.model.Inputs.value_requires", "modulename": "styx.boutiques.model", "qualname": "Inputs.value_requires", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Inputs.value_disables": {"fullname": "styx.boutiques.model.Inputs.value_disables", "modulename": "styx.boutiques.model", "qualname": "Inputs.value_disables", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Inputs.integer": {"fullname": "styx.boutiques.model.Inputs.integer", "modulename": "styx.boutiques.model", "qualname": "Inputs.integer", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.minimum": {"fullname": "styx.boutiques.model.Inputs.minimum", "modulename": "styx.boutiques.model", "qualname": "Inputs.minimum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs.maximum": {"fullname": "styx.boutiques.model.Inputs.maximum", "modulename": "styx.boutiques.model", "qualname": "Inputs.maximum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs.exclusive_minimum": {"fullname": "styx.boutiques.model.Inputs.exclusive_minimum", "modulename": "styx.boutiques.model", "qualname": "Inputs.exclusive_minimum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.exclusive_maximum": {"fullname": "styx.boutiques.model.Inputs.exclusive_maximum", "modulename": "styx.boutiques.model", "qualname": "Inputs.exclusive_maximum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.min_list_entries": {"fullname": "styx.boutiques.model.Inputs.min_list_entries", "modulename": "styx.boutiques.model", "qualname": "Inputs.min_list_entries", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs.max_list_entries": {"fullname": "styx.boutiques.model.Inputs.max_list_entries", "modulename": "styx.boutiques.model", "qualname": "Inputs.max_list_entries", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs.uses_absolute_path": {"fullname": "styx.boutiques.model.Inputs.uses_absolute_path", "modulename": "styx.boutiques.model", "qualname": "Inputs.uses_absolute_path", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs.model_fields": {"fullname": "styx.boutiques.model.Inputs.model_fields", "modulename": "styx.boutiques.model", "qualname": "Inputs.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Type4, required=True, description='Input type.'), 'list': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if input is a list of value. An input of type "Flag" cannot be a list.'), 'id': FieldInfo(annotation=str, required=True, description='A short, unique, informative identifier containing only alphanumeric characters and underscores. Typically used to generate variable names. Example: "data_file".', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]), 'name': FieldInfo(annotation=str, required=True, description="A human-readable input name. Example: 'Data file'.", metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Input description.'), 'value_key': FieldInfo(annotation=Union[str, NoneType], required=False, alias='value-key', alias_priority=2, description='A string contained in command-line, substituted by the input value and/or flag at runtime.'), 'list_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='list-separator', alias_priority=2, description='Separator used between list items. Defaults to a single space.'), 'optional': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if input is optional.'), 'command_line_flag': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag', alias_priority=2, description='Option flag of the input, involved in the value-key substitution. Inputs of type "Flag" have to have a command-line flag. Examples: -v, --force.'), 'requires_inputs': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='requires-inputs', alias_priority=2, description='Ids of the inputs or ids of groups whose members must be active for this input to be available.'), 'disables_inputs': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='disables-inputs', alias_priority=2, description='Ids of the inputs that are disabled when this input is active.'), 'command_line_flag_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag-separator', alias_priority=2, description='Separator used between flags and their arguments. Defaults to a single space.'), 'default_value': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='default-value', alias_priority=2, description='Default value of the input. The default value is set when no value is specified, even when the input is optional. If the desired behavior is to omit the input from the command line when no value is specified, then no default value should be used. In this case, the tool might still use a default value internally, but this will remain undocumented in the Boutiques interface.'), 'value_choices': FieldInfo(annotation=Union[List[Union[str, float]], NoneType], required=False, alias='value-choices', alias_priority=2, description='Permitted choices for input value. May not be used with the Flag type.'), 'value_requires': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False, alias='value-requires', alias_priority=2, description='Ids of the inputs that are required when the corresponding value choice is selected.'), 'value_disables': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False, alias='value-disables', alias_priority=2, description='Ids of the inputs that are disabled when the corresponding value choice is selected.'), 'integer': FieldInfo(annotation=Union[bool, NoneType], required=False, description='Specify whether the input should be an integer. May only be used with Number type inputs.'), 'minimum': FieldInfo(annotation=Union[float, NoneType], required=False, description='Specify the minimum value of the input (inclusive). May only be used with Number type inputs.'), 'maximum': FieldInfo(annotation=Union[float, NoneType], required=False, description='Specify the maximum value of the input (inclusive). May only be used with Number type inputs.'), 'exclusive_minimum': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='exclusive-minimum', alias_priority=2, description='Specify whether the minimum is exclusive or not. May only be used with Number type inputs.'), 'exclusive_maximum': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='exclusive-maximum', alias_priority=2, description='Specify whether the maximum is exclusive or not. May only be used with Number type inputs.'), 'min_list_entries': FieldInfo(annotation=Union[float, NoneType], required=False, alias='min-list-entries', alias_priority=2, description='Specify the minimum number of entries in the list. May only be used with List type inputs.'), 'max_list_entries': FieldInfo(annotation=Union[float, NoneType], required=False, alias='max-list-entries', alias_priority=2, description='Specify the maximum number of entries in the list. May only be used with List type inputs.'), 'uses_absolute_path': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='uses-absolute-path', alias_priority=2, description='Specifies that this input must be given as an absolute path. Only specifiable for File type inputs.')}"}, "styx.boutiques.model.Inputs.model_computed_fields": {"fullname": "styx.boutiques.model.Inputs.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Inputs.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Inputs1": {"fullname": "styx.boutiques.model.Inputs1", "modulename": "styx.boutiques.model", "qualname": "Inputs1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "Input1"}, "styx.boutiques.model.Inputs1.model_config": {"fullname": "styx.boutiques.model.Inputs1.model_config", "modulename": "styx.boutiques.model", "qualname": "Inputs1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.Inputs1.id": {"fullname": "styx.boutiques.model.Inputs1.id", "modulename": "styx.boutiques.model", "qualname": "Inputs1.id", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.Inputs1.name": {"fullname": "styx.boutiques.model.Inputs1.name", "modulename": "styx.boutiques.model", "qualname": "Inputs1.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Inputs1.type": {"fullname": "styx.boutiques.model.Inputs1.type", "modulename": "styx.boutiques.model", "qualname": "Inputs1.type", "kind": "variable", "doc": "

\n", "annotation": ": styx.boutiques.model.Type4"}, "styx.boutiques.model.Inputs1.description": {"fullname": "styx.boutiques.model.Inputs1.description", "modulename": "styx.boutiques.model", "qualname": "Inputs1.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs1.value_key": {"fullname": "styx.boutiques.model.Inputs1.value_key", "modulename": "styx.boutiques.model", "qualname": "Inputs1.value_key", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs1.list": {"fullname": "styx.boutiques.model.Inputs1.list", "modulename": "styx.boutiques.model", "qualname": "Inputs1.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.list_separator": {"fullname": "styx.boutiques.model.Inputs1.list_separator", "modulename": "styx.boutiques.model", "qualname": "Inputs1.list_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs1.optional": {"fullname": "styx.boutiques.model.Inputs1.optional", "modulename": "styx.boutiques.model", "qualname": "Inputs1.optional", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.command_line_flag": {"fullname": "styx.boutiques.model.Inputs1.command_line_flag", "modulename": "styx.boutiques.model", "qualname": "Inputs1.command_line_flag", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs1.requires_inputs": {"fullname": "styx.boutiques.model.Inputs1.requires_inputs", "modulename": "styx.boutiques.model", "qualname": "Inputs1.requires_inputs", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.Inputs1.disables_inputs": {"fullname": "styx.boutiques.model.Inputs1.disables_inputs", "modulename": "styx.boutiques.model", "qualname": "Inputs1.disables_inputs", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"fullname": "styx.boutiques.model.Inputs1.command_line_flag_separator", "modulename": "styx.boutiques.model", "qualname": "Inputs1.command_line_flag_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.Inputs1.default_value": {"fullname": "styx.boutiques.model.Inputs1.default_value", "modulename": "styx.boutiques.model", "qualname": "Inputs1.default_value", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.Inputs1.value_choices": {"fullname": "styx.boutiques.model.Inputs1.value_choices", "modulename": "styx.boutiques.model", "qualname": "Inputs1.value_choices", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[Union[str, float]]]"}, "styx.boutiques.model.Inputs1.value_requires": {"fullname": "styx.boutiques.model.Inputs1.value_requires", "modulename": "styx.boutiques.model", "qualname": "Inputs1.value_requires", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Inputs1.value_disables": {"fullname": "styx.boutiques.model.Inputs1.value_disables", "modulename": "styx.boutiques.model", "qualname": "Inputs1.value_disables", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Inputs1.integer": {"fullname": "styx.boutiques.model.Inputs1.integer", "modulename": "styx.boutiques.model", "qualname": "Inputs1.integer", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.minimum": {"fullname": "styx.boutiques.model.Inputs1.minimum", "modulename": "styx.boutiques.model", "qualname": "Inputs1.minimum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs1.maximum": {"fullname": "styx.boutiques.model.Inputs1.maximum", "modulename": "styx.boutiques.model", "qualname": "Inputs1.maximum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"fullname": "styx.boutiques.model.Inputs1.exclusive_minimum", "modulename": "styx.boutiques.model", "qualname": "Inputs1.exclusive_minimum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"fullname": "styx.boutiques.model.Inputs1.exclusive_maximum", "modulename": "styx.boutiques.model", "qualname": "Inputs1.exclusive_maximum", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.min_list_entries": {"fullname": "styx.boutiques.model.Inputs1.min_list_entries", "modulename": "styx.boutiques.model", "qualname": "Inputs1.min_list_entries", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs1.max_list_entries": {"fullname": "styx.boutiques.model.Inputs1.max_list_entries", "modulename": "styx.boutiques.model", "qualname": "Inputs1.max_list_entries", "kind": "variable", "doc": "

\n", "annotation": ": Optional[float]"}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"fullname": "styx.boutiques.model.Inputs1.uses_absolute_path", "modulename": "styx.boutiques.model", "qualname": "Inputs1.uses_absolute_path", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.Inputs1.model_fields": {"fullname": "styx.boutiques.model.Inputs1.model_fields", "modulename": "styx.boutiques.model", "qualname": "Inputs1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'type': FieldInfo(annotation=Type4, required=True, description='Input type.'), 'id': FieldInfo(annotation=str, required=True, description='A short, unique, informative identifier containing only alphanumeric characters and underscores. Typically used to generate variable names. Example: "data_file".', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]), 'name': FieldInfo(annotation=str, required=True, description="A human-readable input name. Example: 'Data file'.", metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Input description.'), 'value_key': FieldInfo(annotation=Union[str, NoneType], required=False, alias='value-key', alias_priority=2, description='A string contained in command-line, substituted by the input value and/or flag at runtime.'), 'list': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if input is a list of value. An input of type "Flag" cannot be a list.'), 'list_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='list-separator', alias_priority=2, description='Separator used between list items. Defaults to a single space.'), 'optional': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if input is optional.'), 'command_line_flag': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag', alias_priority=2, description='Option flag of the input, involved in the value-key substitution. Inputs of type "Flag" have to have a command-line flag. Examples: -v, --force.'), 'requires_inputs': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='requires-inputs', alias_priority=2, description='Ids of the inputs or ids of groups whose members must be active for this input to be available.'), 'disables_inputs': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='disables-inputs', alias_priority=2, description='Ids of the inputs that are disabled when this input is active.'), 'command_line_flag_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag-separator', alias_priority=2, description='Separator used between flags and their arguments. Defaults to a single space.'), 'default_value': FieldInfo(annotation=Union[Any, NoneType], required=False, alias='default-value', alias_priority=2, description='Default value of the input. The default value is set when no value is specified, even when the input is optional. If the desired behavior is to omit the input from the command line when no value is specified, then no default value should be used. In this case, the tool might still use a default value internally, but this will remain undocumented in the Boutiques interface.'), 'value_choices': FieldInfo(annotation=Union[List[Union[str, float]], NoneType], required=False, alias='value-choices', alias_priority=2, description='Permitted choices for input value. May not be used with the Flag type.'), 'value_requires': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False, alias='value-requires', alias_priority=2, description='Ids of the inputs that are required when the corresponding value choice is selected.'), 'value_disables': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False, alias='value-disables', alias_priority=2, description='Ids of the inputs that are disabled when the corresponding value choice is selected.'), 'integer': FieldInfo(annotation=Union[bool, NoneType], required=False, description='Specify whether the input should be an integer. May only be used with Number type inputs.'), 'minimum': FieldInfo(annotation=Union[float, NoneType], required=False, description='Specify the minimum value of the input (inclusive). May only be used with Number type inputs.'), 'maximum': FieldInfo(annotation=Union[float, NoneType], required=False, description='Specify the maximum value of the input (inclusive). May only be used with Number type inputs.'), 'exclusive_minimum': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='exclusive-minimum', alias_priority=2, description='Specify whether the minimum is exclusive or not. May only be used with Number type inputs.'), 'exclusive_maximum': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='exclusive-maximum', alias_priority=2, description='Specify whether the maximum is exclusive or not. May only be used with Number type inputs.'), 'min_list_entries': FieldInfo(annotation=Union[float, NoneType], required=False, alias='min-list-entries', alias_priority=2, description='Specify the minimum number of entries in the list. May only be used with List type inputs.'), 'max_list_entries': FieldInfo(annotation=Union[float, NoneType], required=False, alias='max-list-entries', alias_priority=2, description='Specify the maximum number of entries in the list. May only be used with List type inputs.'), 'uses_absolute_path': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='uses-absolute-path', alias_priority=2, description='Specifies that this input must be given as an absolute path. Only specifiable for File type inputs.')}"}, "styx.boutiques.model.Inputs1.model_computed_fields": {"fullname": "styx.boutiques.model.Inputs1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Inputs1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Test": {"fullname": "styx.boutiques.model.Test", "modulename": "styx.boutiques.model", "qualname": "Test", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.Test.name": {"fullname": "styx.boutiques.model.Test.name", "modulename": "styx.boutiques.model", "qualname": "Test.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Test.invocation": {"fullname": "styx.boutiques.model.Test.invocation", "modulename": "styx.boutiques.model", "qualname": "Test.invocation", "kind": "variable", "doc": "

\n", "annotation": ": Dict[str, Any]"}, "styx.boutiques.model.Test.model_config": {"fullname": "styx.boutiques.model.Test.model_config", "modulename": "styx.boutiques.model", "qualname": "Test.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Test.model_fields": {"fullname": "styx.boutiques.model.Test.model_fields", "modulename": "styx.boutiques.model", "qualname": "Test.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'name': FieldInfo(annotation=str, required=True, description='Name of the test-case', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'invocation': FieldInfo(annotation=Dict[str, Any], required=True)}"}, "styx.boutiques.model.Test.model_computed_fields": {"fullname": "styx.boutiques.model.Test.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Test.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.OutputFile": {"fullname": "styx.boutiques.model.OutputFile", "modulename": "styx.boutiques.model", "qualname": "OutputFile", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.OutputFile.file_template": {"fullname": "styx.boutiques.model.OutputFile.file_template", "modulename": "styx.boutiques.model", "qualname": "OutputFile.file_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.OutputFile.list": {"fullname": "styx.boutiques.model.OutputFile.list", "modulename": "styx.boutiques.model", "qualname": "OutputFile.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.ListModel]"}, "styx.boutiques.model.OutputFile.model_config": {"fullname": "styx.boutiques.model.OutputFile.model_config", "modulename": "styx.boutiques.model", "qualname": "OutputFile.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.OutputFile.model_fields": {"fullname": "styx.boutiques.model.OutputFile.model_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFile.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'file_template': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='file-template', alias_priority=2, metadata=[MinLen(min_length=1)]), 'list': FieldInfo(annotation=Union[ListModel, NoneType], required=False)}"}, "styx.boutiques.model.OutputFile.model_computed_fields": {"fullname": "styx.boutiques.model.OutputFile.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFile.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.FileTemplate": {"fullname": "styx.boutiques.model.FileTemplate", "modulename": "styx.boutiques.model", "qualname": "FileTemplate", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.boutiques.model.FileTemplate.bool_False": {"fullname": "styx.boutiques.model.FileTemplate.bool_False", "modulename": "styx.boutiques.model", "qualname": "FileTemplate.bool_False", "kind": "variable", "doc": "

\n", "default_value": "<FileTemplate.bool_False: False>"}, "styx.boutiques.model.OutputFile1": {"fullname": "styx.boutiques.model.OutputFile1", "modulename": "styx.boutiques.model", "qualname": "OutputFile1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.OutputFile1.file_template": {"fullname": "styx.boutiques.model.OutputFile1.file_template", "modulename": "styx.boutiques.model", "qualname": "OutputFile1.file_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.FileTemplate]"}, "styx.boutiques.model.OutputFile1.model_config": {"fullname": "styx.boutiques.model.OutputFile1.model_config", "modulename": "styx.boutiques.model", "qualname": "OutputFile1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.OutputFile1.model_fields": {"fullname": "styx.boutiques.model.OutputFile1.model_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFile1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'file_template': FieldInfo(annotation=Union[FileTemplate, NoneType], required=False, alias='file-template', alias_priority=2)}"}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"fullname": "styx.boutiques.model.OutputFile1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFile1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ConditionalPathTemplateItem": {"fullname": "styx.boutiques.model.ConditionalPathTemplateItem", "modulename": "styx.boutiques.model", "qualname": "ConditionalPathTemplateItem", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"fullname": "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames", "modulename": "styx.boutiques.model", "qualname": "ConditionalPathTemplateItem.propertyNames", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Any]"}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"fullname": "styx.boutiques.model.ConditionalPathTemplateItem.model_config", "modulename": "styx.boutiques.model", "qualname": "ConditionalPathTemplateItem.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"fullname": "styx.boutiques.model.ConditionalPathTemplateItem.model_fields", "modulename": "styx.boutiques.model", "qualname": "ConditionalPathTemplateItem.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'propertyNames': FieldInfo(annotation=Union[Any, NoneType], required=False)}"}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"fullname": "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ConditionalPathTemplateItem.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.OutputFiles": {"fullname": "styx.boutiques.model.OutputFiles", "modulename": "styx.boutiques.model", "qualname": "OutputFiles", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "OutputFile"}, "styx.boutiques.model.OutputFiles.model_config": {"fullname": "styx.boutiques.model.OutputFiles.model_config", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.OutputFiles.id": {"fullname": "styx.boutiques.model.OutputFiles.id", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.id", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.OutputFiles.name": {"fullname": "styx.boutiques.model.OutputFiles.name", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.OutputFiles.description": {"fullname": "styx.boutiques.model.OutputFiles.description", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles.value_key": {"fullname": "styx.boutiques.model.OutputFiles.value_key", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.value_key", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles.path_template": {"fullname": "styx.boutiques.model.OutputFiles.path_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.path_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"fullname": "styx.boutiques.model.OutputFiles.conditional_path_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.conditional_path_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.ConditionalPathTemplateItem]]"}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"fullname": "styx.boutiques.model.OutputFiles.path_template_stripped_extensions", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.path_template_stripped_extensions", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.OutputFiles.list": {"fullname": "styx.boutiques.model.OutputFiles.list", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles.optional": {"fullname": "styx.boutiques.model.OutputFiles.optional", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.optional", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles.command_line_flag": {"fullname": "styx.boutiques.model.OutputFiles.command_line_flag", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.command_line_flag", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"fullname": "styx.boutiques.model.OutputFiles.command_line_flag_separator", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.command_line_flag_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"fullname": "styx.boutiques.model.OutputFiles.uses_absolute_path", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.uses_absolute_path", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles.file_template": {"fullname": "styx.boutiques.model.OutputFiles.file_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.file_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.OutputFiles.model_fields": {"fullname": "styx.boutiques.model.OutputFiles.model_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'file_template': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='file-template', alias_priority=2, description='An array of strings that may contain value keys. Each item will be a line in the configuration file.', metadata=[MinLen(min_length=1)]), 'list': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if output is a list of value.'), 'id': FieldInfo(annotation=str, required=True, description='A short, unique, informative identifier containing only alphanumeric characters and underscores. Typically used to generate variable names. Example: "data_file"', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]), 'name': FieldInfo(annotation=str, required=True, description="A human-readable output name. Example: 'Data file'", metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Output description.'), 'value_key': FieldInfo(annotation=Union[str, NoneType], required=False, alias='value-key', alias_priority=2, description='A string contained in command-line, substituted by the output value and/or flag at runtime.'), 'path_template': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='path-template', alias_priority=2, description='Describes the output file path relatively to the execution directory. May contain input value keys and wildcards. Example: "results/[INPUT1]_brain*.mnc".'), 'conditional_path_template': FieldInfo(annotation=Union[List[ConditionalPathTemplateItem], NoneType], required=False, alias='conditional-path-template', alias_priority=2, description='List of objects containing boolean statement (Limited python syntax: ==, !=, <, >, <=, >=, and, or) and output file paths relative to the execution directory, assign path of first true boolean statement. May contain input value keys, "default" object required if "optional" set to True . Example list: "[{"[PARAM1] > 8": "outputs/[INPUT1].txt"}, {"default": "outputs/default.txt"}]".', metadata=[MinLen(min_length=1)]), 'path_template_stripped_extensions': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='path-template-stripped-extensions', alias_priority=2, description='List of file extensions that will be stripped from the input values before being substituted in the path template. Example: [".nii",".nii.gz"].'), 'optional': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if output may not be produced by the tool.'), 'command_line_flag': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag', alias_priority=2, description='Option flag of the output, involved in the value-key substitution. Examples: -o, --output'), 'command_line_flag_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag-separator', alias_priority=2, description='Separator used between flags and their arguments. Defaults to a single space.'), 'uses_absolute_path': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='uses-absolute-path', alias_priority=2, description='Specifies that this output filepath will be given as an absolute path.')}"}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"fullname": "styx.boutiques.model.OutputFiles.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFiles.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.OutputFiles1": {"fullname": "styx.boutiques.model.OutputFiles1", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "OutputFile1"}, "styx.boutiques.model.OutputFiles1.model_config": {"fullname": "styx.boutiques.model.OutputFiles1.model_config", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.OutputFiles1.id": {"fullname": "styx.boutiques.model.OutputFiles1.id", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.id", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]"}, "styx.boutiques.model.OutputFiles1.name": {"fullname": "styx.boutiques.model.OutputFiles1.name", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.OutputFiles1.description": {"fullname": "styx.boutiques.model.OutputFiles1.description", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.description", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles1.value_key": {"fullname": "styx.boutiques.model.OutputFiles1.value_key", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.value_key", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles1.path_template": {"fullname": "styx.boutiques.model.OutputFiles1.path_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.path_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"fullname": "styx.boutiques.model.OutputFiles1.conditional_path_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.conditional_path_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.ConditionalPathTemplateItem]]"}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"fullname": "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.path_template_stripped_extensions", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.OutputFiles1.list": {"fullname": "styx.boutiques.model.OutputFiles1.list", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.list", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles1.optional": {"fullname": "styx.boutiques.model.OutputFiles1.optional", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.optional", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"fullname": "styx.boutiques.model.OutputFiles1.command_line_flag", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.command_line_flag", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"fullname": "styx.boutiques.model.OutputFiles1.command_line_flag_separator", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.command_line_flag_separator", "kind": "variable", "doc": "

\n", "annotation": ": Optional[str]"}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"fullname": "styx.boutiques.model.OutputFiles1.uses_absolute_path", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.uses_absolute_path", "kind": "variable", "doc": "

\n", "annotation": ": Optional[bool]"}, "styx.boutiques.model.OutputFiles1.file_template": {"fullname": "styx.boutiques.model.OutputFiles1.file_template", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.file_template", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[str]]"}, "styx.boutiques.model.OutputFiles1.model_fields": {"fullname": "styx.boutiques.model.OutputFiles1.model_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'file_template': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='file-template', alias_priority=2, description='An array of strings that may contain value keys. Each item will be a line in the configuration file.', metadata=[MinLen(min_length=1)]), 'id': FieldInfo(annotation=str, required=True, description='A short, unique, informative identifier containing only alphanumeric characters and underscores. Typically used to generate variable names. Example: "data_file"', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern='^[0-9,_,a-z,A-Z]*$')]), 'name': FieldInfo(annotation=str, required=True, description="A human-readable output name. Example: 'Data file'", metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=Union[str, NoneType], required=False, description='Output description.'), 'value_key': FieldInfo(annotation=Union[str, NoneType], required=False, alias='value-key', alias_priority=2, description='A string contained in command-line, substituted by the output value and/or flag at runtime.'), 'path_template': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='path-template', alias_priority=2, description='Describes the output file path relatively to the execution directory. May contain input value keys and wildcards. Example: "results/[INPUT1]_brain*.mnc".'), 'conditional_path_template': FieldInfo(annotation=Union[List[ConditionalPathTemplateItem], NoneType], required=False, alias='conditional-path-template', alias_priority=2, description='List of objects containing boolean statement (Limited python syntax: ==, !=, <, >, <=, >=, and, or) and output file paths relative to the execution directory, assign path of first true boolean statement. May contain input value keys, "default" object required if "optional" set to True . Example list: "[{"[PARAM1] > 8": "outputs/[INPUT1].txt"}, {"default": "outputs/default.txt"}]".', metadata=[MinLen(min_length=1)]), 'path_template_stripped_extensions': FieldInfo(annotation=Union[List[str], NoneType], required=False, alias='path-template-stripped-extensions', alias_priority=2, description='List of file extensions that will be stripped from the input values before being substituted in the path template. Example: [".nii",".nii.gz"].'), 'list': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if output is a list of value.'), 'optional': FieldInfo(annotation=Union[bool, NoneType], required=False, description='True if output may not be produced by the tool.'), 'command_line_flag': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag', alias_priority=2, description='Option flag of the output, involved in the value-key substitution. Examples: -o, --output'), 'command_line_flag_separator': FieldInfo(annotation=Union[str, NoneType], required=False, alias='command-line-flag-separator', alias_priority=2, description='Separator used between flags and their arguments. Defaults to a single space.'), 'uses_absolute_path': FieldInfo(annotation=Union[bool, NoneType], required=False, alias='uses-absolute-path', alias_priority=2, description='Specifies that this output filepath will be given as an absolute path.')}"}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"fullname": "styx.boutiques.model.OutputFiles1.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "OutputFiles1.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.SuggestedResources": {"fullname": "styx.boutiques.model.SuggestedResources", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"fullname": "styx.boutiques.model.SuggestedResources.cpu_cores", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.cpu_cores", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[int, None, Interval(gt=None, ge=1, lt=None, le=None), None]]"}, "styx.boutiques.model.SuggestedResources.ram": {"fullname": "styx.boutiques.model.SuggestedResources.ram", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.ram", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[float, None, Interval(gt=None, ge=0.0, lt=None, le=None), None, None]]"}, "styx.boutiques.model.SuggestedResources.disk_space": {"fullname": "styx.boutiques.model.SuggestedResources.disk_space", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.disk_space", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[float, None, Interval(gt=None, ge=0.0, lt=None, le=None), None, None]]"}, "styx.boutiques.model.SuggestedResources.nodes": {"fullname": "styx.boutiques.model.SuggestedResources.nodes", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.nodes", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[int, None, Interval(gt=None, ge=1, lt=None, le=None), None]]"}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"fullname": "styx.boutiques.model.SuggestedResources.walltime_estimate", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.walltime_estimate", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[float, None, Interval(gt=None, ge=0.0, lt=None, le=None), None, None]]"}, "styx.boutiques.model.SuggestedResources.model_config": {"fullname": "styx.boutiques.model.SuggestedResources.model_config", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.model_config", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.SuggestedResources.model_fields": {"fullname": "styx.boutiques.model.SuggestedResources.model_fields", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'cpu_cores': FieldInfo(annotation=Union[Annotated[int, NoneType, Interval, NoneType], NoneType], required=False, alias='cpu-cores', alias_priority=2, description='The requested number of cpu cores to run the described application'), 'ram': FieldInfo(annotation=Union[Annotated[float, NoneType, Interval, NoneType, NoneType], NoneType], required=False, description='The requested number of GB RAM to run the described application'), 'disk_space': FieldInfo(annotation=Union[Annotated[float, NoneType, Interval, NoneType, NoneType], NoneType], required=False, alias='disk-space', alias_priority=2, description='The requested number of GB of storage to run the described application'), 'nodes': FieldInfo(annotation=Union[Annotated[int, NoneType, Interval, NoneType], NoneType], required=False, description='The requested number of nodes to spread the described application across'), 'walltime_estimate': FieldInfo(annotation=Union[Annotated[float, NoneType, Interval, NoneType, NoneType], NoneType], required=False, alias='walltime-estimate', alias_priority=2, description='Estimated wall time of a task in seconds.')}"}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"fullname": "styx.boutiques.model.SuggestedResources.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "SuggestedResources.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.ErrorCode": {"fullname": "styx.boutiques.model.ErrorCode", "modulename": "styx.boutiques.model", "qualname": "ErrorCode", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.ErrorCode.model_config": {"fullname": "styx.boutiques.model.ErrorCode.model_config", "modulename": "styx.boutiques.model", "qualname": "ErrorCode.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.ErrorCode.code": {"fullname": "styx.boutiques.model.ErrorCode.code", "modulename": "styx.boutiques.model", "qualname": "ErrorCode.code", "kind": "variable", "doc": "

\n", "annotation": ": int"}, "styx.boutiques.model.ErrorCode.description": {"fullname": "styx.boutiques.model.ErrorCode.description", "modulename": "styx.boutiques.model", "qualname": "ErrorCode.description", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.boutiques.model.ErrorCode.model_fields": {"fullname": "styx.boutiques.model.ErrorCode.model_fields", "modulename": "styx.boutiques.model", "qualname": "ErrorCode.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'code': FieldInfo(annotation=int, required=True, description='Value of the exit code'), 'description': FieldInfo(annotation=str, required=True, description='Description of the error code.')}"}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"fullname": "styx.boutiques.model.ErrorCode.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "ErrorCode.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.model.Tool": {"fullname": "styx.boutiques.model.Tool", "modulename": "styx.boutiques.model", "qualname": "Tool", "kind": "class", "doc": "

Usage docs: https://docs.pydantic.dev/2.6/concepts/models/

\n\n

A base class for creating Pydantic models.

\n\n
Attributes:
\n\n
    \n
  • __class_vars__: The names of classvars defined on the model.
    • \n
  • __private_attributes__: Metadata about the private attributes of the model.
    • \n
  • __signature__: The signature for instantiating the model.
    • \n
  • __pydantic_complete__: Whether model building is completed, or if there are still undefined fields.
    • \n
  • __pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.
    • \n
  • __pydantic_custom_init__: Whether the model has a custom __init__ function.
    • \n
  • __pydantic_decorators__: Metadata containing the decorators defined on the model.\nThis replaces Model.__validators__ and Model.__root_validators__ from Pydantic V1.
    • \n
  • __pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n__args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.
    • \n
  • __pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.
    • \n
  • __pydantic_post_init__: The name of the post-init method for the model, if defined.
    • \n
  • __pydantic_root_model__: Whether the model is a RootModel.
    • \n
  • __pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.
    • \n
  • __pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.
    • \n
  • __pydantic_extra__: An instance attribute with the values of extra fields from validation when\nmodel_config['extra'] == 'allow'.
    • \n
  • __pydantic_fields_set__: An instance attribute with the names of fields explicitly set.
    • \n
  • __pydantic_private__: Instance attribute with the values of private attributes set on the model instance.
    • \n
\n", "bases": "pydantic.main.BaseModel"}, "styx.boutiques.model.Tool.model_config": {"fullname": "styx.boutiques.model.Tool.model_config", "modulename": "styx.boutiques.model", "qualname": "Tool.model_config", "kind": "variable", "doc": "

\n", "default_value": "{'extra': 'forbid'}"}, "styx.boutiques.model.Tool.name": {"fullname": "styx.boutiques.model.Tool.name", "modulename": "styx.boutiques.model", "qualname": "Tool.name", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Tool.tool_version": {"fullname": "styx.boutiques.model.Tool.tool_version", "modulename": "styx.boutiques.model", "qualname": "Tool.tool_version", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Tool.description": {"fullname": "styx.boutiques.model.Tool.description", "modulename": "styx.boutiques.model", "qualname": "Tool.description", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Tool.deprecated_by_doi": {"fullname": "styx.boutiques.model.Tool.deprecated_by_doi", "modulename": "styx.boutiques.model", "qualname": "Tool.deprecated_by_doi", "kind": "variable", "doc": "

\n", "annotation": ": Union[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)], bool, NoneType]"}, "styx.boutiques.model.Tool.author": {"fullname": "styx.boutiques.model.Tool.author", "modulename": "styx.boutiques.model", "qualname": "Tool.author", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.url": {"fullname": "styx.boutiques.model.Tool.url", "modulename": "styx.boutiques.model", "qualname": "Tool.url", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.descriptor_url": {"fullname": "styx.boutiques.model.Tool.descriptor_url", "modulename": "styx.boutiques.model", "qualname": "Tool.descriptor_url", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.doi": {"fullname": "styx.boutiques.model.Tool.doi", "modulename": "styx.boutiques.model", "qualname": "Tool.doi", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.shell": {"fullname": "styx.boutiques.model.Tool.shell", "modulename": "styx.boutiques.model", "qualname": "Tool.shell", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.tool_doi": {"fullname": "styx.boutiques.model.Tool.tool_doi", "modulename": "styx.boutiques.model", "qualname": "Tool.tool_doi", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]]"}, "styx.boutiques.model.Tool.command_line": {"fullname": "styx.boutiques.model.Tool.command_line", "modulename": "styx.boutiques.model", "qualname": "Tool.command_line", "kind": "variable", "doc": "

\n", "annotation": ": Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]"}, "styx.boutiques.model.Tool.container_image": {"fullname": "styx.boutiques.model.Tool.container_image", "modulename": "styx.boutiques.model", "qualname": "Tool.container_image", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.ContainerImage]"}, "styx.boutiques.model.Tool.schema_version": {"fullname": "styx.boutiques.model.Tool.schema_version", "modulename": "styx.boutiques.model", "qualname": "Tool.schema_version", "kind": "variable", "doc": "

\n", "annotation": ": styx.boutiques.model.SchemaVersion"}, "styx.boutiques.model.Tool.environment_variables": {"fullname": "styx.boutiques.model.Tool.environment_variables", "modulename": "styx.boutiques.model", "qualname": "Tool.environment_variables", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.EnvironmentVariable]]"}, "styx.boutiques.model.Tool.groups": {"fullname": "styx.boutiques.model.Tool.groups", "modulename": "styx.boutiques.model", "qualname": "Tool.groups", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.Group]]"}, "styx.boutiques.model.Tool.inputs": {"fullname": "styx.boutiques.model.Tool.inputs", "modulename": "styx.boutiques.model", "qualname": "Tool.inputs", "kind": "variable", "doc": "

\n", "annotation": ": List[Union[styx.boutiques.model.Inputs, styx.boutiques.model.Inputs1]]"}, "styx.boutiques.model.Tool.tests": {"fullname": "styx.boutiques.model.Tool.tests", "modulename": "styx.boutiques.model", "qualname": "Tool.tests", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.Test]]"}, "styx.boutiques.model.Tool.online_platform_urls": {"fullname": "styx.boutiques.model.Tool.online_platform_urls", "modulename": "styx.boutiques.model", "qualname": "Tool.online_platform_urls", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[Annotated[str, StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=None, max_length=None, pattern='^https?://')]]]"}, "styx.boutiques.model.Tool.output_files": {"fullname": "styx.boutiques.model.Tool.output_files", "modulename": "styx.boutiques.model", "qualname": "Tool.output_files", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[Union[styx.boutiques.model.OutputFiles, styx.boutiques.model.OutputFiles1]]]"}, "styx.boutiques.model.Tool.invocation_schema": {"fullname": "styx.boutiques.model.Tool.invocation_schema", "modulename": "styx.boutiques.model", "qualname": "Tool.invocation_schema", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Tool.suggested_resources": {"fullname": "styx.boutiques.model.Tool.suggested_resources", "modulename": "styx.boutiques.model", "qualname": "Tool.suggested_resources", "kind": "variable", "doc": "

\n", "annotation": ": Optional[styx.boutiques.model.SuggestedResources]"}, "styx.boutiques.model.Tool.tags": {"fullname": "styx.boutiques.model.Tool.tags", "modulename": "styx.boutiques.model", "qualname": "Tool.tags", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, List[str]]]"}, "styx.boutiques.model.Tool.error_codes": {"fullname": "styx.boutiques.model.Tool.error_codes", "modulename": "styx.boutiques.model", "qualname": "Tool.error_codes", "kind": "variable", "doc": "

\n", "annotation": ": Optional[List[styx.boutiques.model.ErrorCode]]"}, "styx.boutiques.model.Tool.custom": {"fullname": "styx.boutiques.model.Tool.custom", "modulename": "styx.boutiques.model", "qualname": "Tool.custom", "kind": "variable", "doc": "

\n", "annotation": ": Optional[Dict[str, Any]]"}, "styx.boutiques.model.Tool.model_fields": {"fullname": "styx.boutiques.model.Tool.model_fields", "modulename": "styx.boutiques.model", "qualname": "Tool.model_fields", "kind": "variable", "doc": "

\n", "default_value": "{'name': FieldInfo(annotation=str, required=True, description='Tool name.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'tool_version': FieldInfo(annotation=str, required=True, alias='tool-version', alias_priority=2, description='Tool version.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'description': FieldInfo(annotation=str, required=True, description='Tool description.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'deprecated_by_doi': FieldInfo(annotation=Union[Annotated[str, StringConstraints], bool, NoneType], required=False, alias='deprecated-by-doi', alias_priority=2, description="doi of the tool that deprecates the current one. May be set to 'true' if the current tool is deprecated but no specific tool deprecates it."), 'author': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='Tool author name(s).'), 'url': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='Tool URL.'), 'descriptor_url': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='descriptor-url', alias_priority=2, description='Link to the descriptor itself (e.g. the GitHub repo where it is hosted).'), 'doi': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='DOI of the descriptor (not of the tool itself).'), 'shell': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, description='Absolute path of the shell interpreter to use in the container (defaults to /bin/sh).'), 'tool_doi': FieldInfo(annotation=Union[Annotated[str, StringConstraints], NoneType], required=False, alias='tool-doi', alias_priority=2, description='DOI of the tool (not of the descriptor).'), 'command_line': FieldInfo(annotation=str, required=True, alias='command-line', alias_priority=2, description='A string that describes the tool command line, where input and output values are identified by "keys". At runtime, command-line keys are substituted with flags and values.', metadata=[StringConstraints(strip_whitespace=None, to_upper=None, to_lower=None, strict=None, min_length=1, max_length=None, pattern=None)]), 'container_image': FieldInfo(annotation=Union[ContainerImage, NoneType], required=False, alias='container-image', alias_priority=2), 'schema_version': FieldInfo(annotation=SchemaVersion, required=True, alias='schema-version', alias_priority=2, description='Version of the schema used.'), 'environment_variables': FieldInfo(annotation=Union[List[EnvironmentVariable], NoneType], required=False, alias='environment-variables', alias_priority=2, description='An array of key-value pairs specifying environment variable names and their values to be used in the execution environment.', metadata=[MinLen(min_length=1)]), 'groups': FieldInfo(annotation=Union[List[Group], NoneType], required=False, description='Sets of identifiers of inputs, each specifying an input group.', metadata=[MinLen(min_length=1)]), 'inputs': FieldInfo(annotation=List[Union[Inputs, Inputs1]], required=True, metadata=[MinLen(min_length=1)]), 'tests': FieldInfo(annotation=Union[List[Test], NoneType], required=False, metadata=[MinLen(min_length=1)]), 'online_platform_urls': FieldInfo(annotation=Union[List[Annotated[str, StringConstraints]], NoneType], required=False, alias='online-platform-urls', alias_priority=2, description='Online platform URLs from which the tool can be executed.'), 'output_files': FieldInfo(annotation=Union[List[Union[OutputFiles, OutputFiles1]], NoneType], required=False, alias='output-files', alias_priority=2, metadata=[MinLen(min_length=1)]), 'invocation_schema': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False, alias='invocation-schema', alias_priority=2), 'suggested_resources': FieldInfo(annotation=Union[SuggestedResources, NoneType], required=False, alias='suggested-resources', alias_priority=2), 'tags': FieldInfo(annotation=Union[Dict[str, List[str]], NoneType], required=False, description='A set of key-value pairs specifying tags describing the pipeline. The tag names are open, they might be more constrained in the future.'), 'error_codes': FieldInfo(annotation=Union[List[ErrorCode], NoneType], required=False, alias='error-codes', alias_priority=2, description='An array of key-value pairs specifying exit codes and their description. Can be used for tools to specify the meaning of particular exit codes. Exit code 0 is assumed to indicate a successful execution.', metadata=[MinLen(min_length=1)]), 'custom': FieldInfo(annotation=Union[Dict[str, Any], NoneType], required=False)}"}, "styx.boutiques.model.Tool.model_computed_fields": {"fullname": "styx.boutiques.model.Tool.model_computed_fields", "modulename": "styx.boutiques.model", "qualname": "Tool.model_computed_fields", "kind": "variable", "doc": "

\n", "default_value": "{}"}, "styx.boutiques.utils": {"fullname": "styx.boutiques.utils", "modulename": "styx.boutiques.utils", "kind": "module", "doc": "

\n"}, "styx.boutiques.utils.boutiques_from_dict": {"fullname": "styx.boutiques.utils.boutiques_from_dict", "modulename": "styx.boutiques.utils", "qualname": "boutiques_from_dict", "kind": "function", "doc": "

Create a Boutiques model from a dictionary.

\n\n
Arguments:
\n\n
    \n
  • data (dict): The dictionary.
    • \n
\n\n
Returns:
\n\n
\n

styx.boutiques.model.Tool: The Boutiques model.

\n
\n", "signature": "(data: dict) -> styx.boutiques.model.Tool:", "funcdef": "def"}, "styx.boutiques.utils.boutiques_split_command": {"fullname": "styx.boutiques.utils.boutiques_split_command", "modulename": "styx.boutiques.utils", "qualname": "boutiques_split_command", "kind": "function", "doc": "

Split a Boutiques command into a list of arguments.

\n\n
Arguments:
\n\n
    \n
  • command (str): The Boutiques command.
    • \n
\n\n
Returns:
\n\n
\n

list[str]: The list of arguments.

\n
\n", "signature": "(command: str) -> list[str]:", "funcdef": "def"}, "styx.cli": {"fullname": "styx.cli", "modulename": "styx.cli", "kind": "module", "doc": "

Command line interface for styx.

\n"}, "styx.compiler": {"fullname": "styx.compiler", "modulename": "styx.compiler", "kind": "module", "doc": "

Boutiques to python compiler.

\n"}, "styx.compiler.core": {"fullname": "styx.compiler.core", "modulename": "styx.compiler.core", "kind": "module", "doc": "

\n"}, "styx.compiler.core.BtPrimitive": {"fullname": "styx.compiler.core.BtPrimitive", "modulename": "styx.compiler.core", "qualname": "BtPrimitive", "kind": "class", "doc": "

Create a collection of name/value pairs.

\n\n

Example enumeration:

\n\n
\n
>>> class Color(Enum):\n...     RED = 1\n...     BLUE = 2\n...     GREEN = 3\n
\n
\n\n

Access them by:

\n\n
    \n

  • attribute access:

    \n\n
    \n
    >>> Color.RED\n<Color.RED: 1>\n
    \n
    • \n

  • value lookup:

    \n\n
    \n
    >>> Color(1)\n<Color.RED: 1>\n
    \n
    • \n

  • name lookup:

    \n\n
    \n
    >>> Color['RED']\n<Color.RED: 1>\n
    \n
    • \n
\n\n

Enumerations can be iterated over, and know how many members they have:

\n\n
\n
>>> len(Color)\n3\n
\n
\n\n
\n
>>> list(Color)\n[<Color.RED: 1>, <Color.BLUE: 2>, <Color.GREEN: 3>]\n
\n
\n\n

Methods can be added to enumerations, and members can have their own\nattributes -- see the documentation for details.

\n", "bases": "enum.Enum"}, "styx.compiler.core.BtPrimitive.String": {"fullname": "styx.compiler.core.BtPrimitive.String", "modulename": "styx.compiler.core", "qualname": "BtPrimitive.String", "kind": "variable", "doc": "

\n", "default_value": "<BtPrimitive.String: 1>"}, "styx.compiler.core.BtPrimitive.Number": {"fullname": "styx.compiler.core.BtPrimitive.Number", "modulename": "styx.compiler.core", "qualname": "BtPrimitive.Number", "kind": "variable", "doc": "

\n", "default_value": "<BtPrimitive.Number: 2>"}, "styx.compiler.core.BtPrimitive.Integer": {"fullname": "styx.compiler.core.BtPrimitive.Integer", "modulename": "styx.compiler.core", "qualname": "BtPrimitive.Integer", "kind": "variable", "doc": "

\n", "default_value": "<BtPrimitive.Integer: 3>"}, "styx.compiler.core.BtPrimitive.File": {"fullname": "styx.compiler.core.BtPrimitive.File", "modulename": "styx.compiler.core", "qualname": "BtPrimitive.File", "kind": "variable", "doc": "

\n", "default_value": "<BtPrimitive.File: 4>"}, "styx.compiler.core.BtPrimitive.Flag": {"fullname": "styx.compiler.core.BtPrimitive.Flag", "modulename": "styx.compiler.core", "qualname": "BtPrimitive.Flag", "kind": "variable", "doc": "

\n", "default_value": "<BtPrimitive.Flag: 5>"}, "styx.compiler.core.BtType": {"fullname": "styx.compiler.core.BtType", "modulename": "styx.compiler.core", "qualname": "BtType", "kind": "class", "doc": "

\n"}, "styx.compiler.core.BtType.__init__": {"fullname": "styx.compiler.core.BtType.__init__", "modulename": "styx.compiler.core", "qualname": "BtType.__init__", "kind": "function", "doc": "

\n", "signature": "(\tprimitive: styx.compiler.core.BtPrimitive,\tis_list: bool,\tis_optional: bool,\tis_enum: bool)"}, "styx.compiler.core.BtType.primitive": {"fullname": "styx.compiler.core.BtType.primitive", "modulename": "styx.compiler.core", "qualname": "BtType.primitive", "kind": "variable", "doc": "

\n", "annotation": ": styx.compiler.core.BtPrimitive"}, "styx.compiler.core.BtType.is_list": {"fullname": "styx.compiler.core.BtType.is_list", "modulename": "styx.compiler.core", "qualname": "BtType.is_list", "kind": "variable", "doc": "

\n", "annotation": ": bool"}, "styx.compiler.core.BtType.is_optional": {"fullname": "styx.compiler.core.BtType.is_optional", "modulename": "styx.compiler.core", "qualname": "BtType.is_optional", "kind": "variable", "doc": "

\n", "annotation": ": bool"}, "styx.compiler.core.BtType.is_enum": {"fullname": "styx.compiler.core.BtType.is_enum", "modulename": "styx.compiler.core", "qualname": "BtType.is_enum", "kind": "variable", "doc": "

\n", "annotation": ": bool"}, "styx.compiler.core.BtInput": {"fullname": "styx.compiler.core.BtInput", "modulename": "styx.compiler.core", "qualname": "BtInput", "kind": "class", "doc": "

\n"}, "styx.compiler.core.BtInput.__init__": {"fullname": "styx.compiler.core.BtInput.__init__", "modulename": "styx.compiler.core", "qualname": "BtInput.__init__", "kind": "function", "doc": "

\n", "signature": "(\tbt_input: styx.boutiques.model.Inputs,\tscope: styx.pycodegen.scope.Scope)"}, "styx.compiler.core.BtInput.bt_ref": {"fullname": "styx.compiler.core.BtInput.bt_ref", "modulename": "styx.compiler.core", "qualname": "BtInput.bt_ref", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.py_symbol": {"fullname": "styx.compiler.core.BtInput.py_symbol", "modulename": "styx.compiler.core", "qualname": "BtInput.py_symbol", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.docstring": {"fullname": "styx.compiler.core.BtInput.docstring", "modulename": "styx.compiler.core", "qualname": "BtInput.docstring", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.command_line_flag": {"fullname": "styx.compiler.core.BtInput.command_line_flag", "modulename": "styx.compiler.core", "qualname": "BtInput.command_line_flag", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.list_separator": {"fullname": "styx.compiler.core.BtInput.list_separator", "modulename": "styx.compiler.core", "qualname": "BtInput.list_separator", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.minimum": {"fullname": "styx.compiler.core.BtInput.minimum", "modulename": "styx.compiler.core", "qualname": "BtInput.minimum", "kind": "variable", "doc": "

\n", "annotation": ": float | int | None"}, "styx.compiler.core.BtInput.minimum_exclusive": {"fullname": "styx.compiler.core.BtInput.minimum_exclusive", "modulename": "styx.compiler.core", "qualname": "BtInput.minimum_exclusive", "kind": "variable", "doc": "

\n", "annotation": ": bool"}, "styx.compiler.core.BtInput.maximum": {"fullname": "styx.compiler.core.BtInput.maximum", "modulename": "styx.compiler.core", "qualname": "BtInput.maximum", "kind": "variable", "doc": "

\n", "annotation": ": float | int | None"}, "styx.compiler.core.BtInput.maximum_exclusive": {"fullname": "styx.compiler.core.BtInput.maximum_exclusive", "modulename": "styx.compiler.core", "qualname": "BtInput.maximum_exclusive", "kind": "variable", "doc": "

\n", "annotation": ": bool"}, "styx.compiler.core.BtInput.list_minimum": {"fullname": "styx.compiler.core.BtInput.list_minimum", "modulename": "styx.compiler.core", "qualname": "BtInput.list_minimum", "kind": "variable", "doc": "

\n", "annotation": ": int | None"}, "styx.compiler.core.BtInput.list_maximum": {"fullname": "styx.compiler.core.BtInput.list_maximum", "modulename": "styx.compiler.core", "qualname": "BtInput.list_maximum", "kind": "variable", "doc": "

\n", "annotation": ": int | None"}, "styx.compiler.core.BtInput.py_type": {"fullname": "styx.compiler.core.BtInput.py_type", "modulename": "styx.compiler.core", "qualname": "BtInput.py_type", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.py_default": {"fullname": "styx.compiler.core.BtInput.py_default", "modulename": "styx.compiler.core", "qualname": "BtInput.py_default", "kind": "variable", "doc": "

\n", "annotation": ": str | None"}, "styx.compiler.core.BtInput.py_expr": {"fullname": "styx.compiler.core.BtInput.py_expr", "modulename": "styx.compiler.core", "qualname": "BtInput.py_expr", "kind": "variable", "doc": "

\n"}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"fullname": "styx.compiler.core.BtInput.bt_type_to_py_type", "modulename": "styx.compiler.core", "qualname": "BtInput.bt_type_to_py_type", "kind": "function", "doc": "

\n", "signature": "(cls, bt_type: styx.compiler.core.BtType, enum_values: list | None) -> str:", "funcdef": "def"}, "styx.compiler.core.BtInput.py_expr_is_set": {"fullname": "styx.compiler.core.BtInput.py_expr_is_set", "modulename": "styx.compiler.core", "qualname": "BtInput.py_expr_is_set", "kind": "function", "doc": "

\n", "signature": "(self) -> str:", "funcdef": "def"}, "styx.compiler.core.compile_descriptor": {"fullname": "styx.compiler.core.compile_descriptor", "modulename": "styx.compiler.core", "qualname": "compile_descriptor", "kind": "function", "doc": "

Compile a Boutiques descriptor to Python code.

\n", "signature": "(\tdescriptor: styx.boutiques.model.Tool,\tsettings: styx.compiler.settings.CompilerSettings) -> str:", "funcdef": "def"}, "styx.compiler.defs": {"fullname": "styx.compiler.defs", "modulename": "styx.compiler.defs", "kind": "module", "doc": "

Static type declarations used by compiled code.

\n"}, "styx.compiler.defs.STYX_DEFINITIONS": {"fullname": "styx.compiler.defs.STYX_DEFINITIONS", "modulename": "styx.compiler.defs", "qualname": "STYX_DEFINITIONS", "kind": "variable", "doc": "

\n", "default_value": "['P = typing.TypeVar("P")', '"""Input host file type."""', 'R = typing.TypeVar("R")', '"""Output host file type."""', '', '', 'class Execution(typing.Protocol[P, R]):', ' """', ' Execution object used to execute commands.', ' Created by `Runner.start_execution()`.', ' """', ' def input_file(self, host_file: P) -> str:', ' """', ' Resolve host input files.', ' Returns a local filepath.', ' Called (potentially multiple times) after `Runner.start_execution()` and before `Runner.run()`.', ' """', ' ...', ' def run(self, cargs: list[str]) -> None:', ' """', ' Run the command.', ' Called after all `Execution.input_file()` calls and before `Execution.output_file()` calls.', ' """', ' ...', ' def output_file(self, local_file: str) -> R:', ' """', ' Resolve local output files.', ' Returns a host filepath.', ' Called (potentially multiple times) after `Runner.run()` and before `Execution.finalize()`.', ' """', ' ...', ' def finalize(self) -> None:', ' """', ' Finalize the execution.', ' Called after all `Execution.output_file()` calls.', ' """', ' ...', '', '', 'class Runner(typing.Protocol[P, R]):', ' """', ' Runner object used to execute commands.', ' Possible examples would be `LocalRunner`, `DockerRunner`, `DebugRunner`, ...', ' Used as a factory for `Execution` objects.', ' """', ' def start_execution(self, tool_name: str) -> Execution[P, R]:', ' """', ' Start an execution.', ' Called before any `Execution.input_file()` calls.', ' """', ' ...']"}, "styx.compiler.settings": {"fullname": "styx.compiler.settings", "modulename": "styx.compiler.settings", "kind": "module", "doc": "

Compiler settings.

\n"}, "styx.compiler.settings.DefsMode": {"fullname": "styx.compiler.settings.DefsMode", "modulename": "styx.compiler.settings", "qualname": "DefsMode", "kind": "class", "doc": "

Runtime definitions mode.

\n", "bases": "enum.Enum"}, "styx.compiler.settings.DefsMode.INLINE": {"fullname": "styx.compiler.settings.DefsMode.INLINE", "modulename": "styx.compiler.settings", "qualname": "DefsMode.INLINE", "kind": "variable", "doc": "

\n", "default_value": "<DefsMode.INLINE: 0>"}, "styx.compiler.settings.DefsMode.IMPORT": {"fullname": "styx.compiler.settings.DefsMode.IMPORT", "modulename": "styx.compiler.settings", "qualname": "DefsMode.IMPORT", "kind": "variable", "doc": "

\n", "default_value": "<DefsMode.IMPORT: 1>"}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"fullname": "styx.compiler.settings.DefsMode.DEFS_ONLY", "modulename": "styx.compiler.settings", "qualname": "DefsMode.DEFS_ONLY", "kind": "variable", "doc": "

\n", "default_value": "<DefsMode.DEFS_ONLY: 2>"}, "styx.compiler.settings.CompilerSettings": {"fullname": "styx.compiler.settings.CompilerSettings", "modulename": "styx.compiler.settings", "qualname": "CompilerSettings", "kind": "class", "doc": "

\n"}, "styx.compiler.settings.CompilerSettings.__init__": {"fullname": "styx.compiler.settings.CompilerSettings.__init__", "modulename": "styx.compiler.settings", "qualname": "CompilerSettings.__init__", "kind": "function", "doc": "

\n", "signature": "(defs_mode: styx.compiler.settings.DefsMode = <DefsMode.INLINE: 0>)"}, "styx.compiler.settings.CompilerSettings.defs_mode": {"fullname": "styx.compiler.settings.CompilerSettings.defs_mode", "modulename": "styx.compiler.settings", "qualname": "CompilerSettings.defs_mode", "kind": "variable", "doc": "

\n", "annotation": ": styx.compiler.settings.DefsMode", "default_value": "<DefsMode.INLINE: 0>"}, "styx.compiler.utils": {"fullname": "styx.compiler.utils", "modulename": "styx.compiler.utils", "kind": "module", "doc": "

Compiler utilities.

\n"}, "styx.compiler.utils.optional_float_to_int": {"fullname": "styx.compiler.utils.optional_float_to_int", "modulename": "styx.compiler.utils", "qualname": "optional_float_to_int", "kind": "function", "doc": "

Convert an optional float to an optional int.

\n", "signature": "(value: float | None) -> int | None:", "funcdef": "def"}, "styx.main": {"fullname": "styx.main", "modulename": "styx.main", "kind": "module", "doc": "

\n"}, "styx.main.main": {"fullname": "styx.main.main", "modulename": "styx.main", "qualname": "main", "kind": "function", "doc": "

\n", "signature": "() -> None:", "funcdef": "def"}, "styx.pycodegen": {"fullname": "styx.pycodegen", "modulename": "styx.pycodegen", "kind": "module", "doc": "

Generic Python code generation utilities. Implemented on demand.

\n"}, "styx.pycodegen.core": {"fullname": "styx.pycodegen.core", "modulename": "styx.pycodegen.core", "kind": "module", "doc": "

Generic Python code generation utilities. Implemented on demand.

\n"}, "styx.pycodegen.core.LineBuffer": {"fullname": "styx.pycodegen.core.LineBuffer", "modulename": "styx.pycodegen.core", "qualname": "LineBuffer", "kind": "variable", "doc": "

\n", "default_value": "list[str]"}, "styx.pycodegen.core.INDENT": {"fullname": "styx.pycodegen.core.INDENT", "modulename": "styx.pycodegen.core", "qualname": "INDENT", "kind": "variable", "doc": "

\n", "default_value": "' '"}, "styx.pycodegen.core.indent": {"fullname": "styx.pycodegen.core.indent", "modulename": "styx.pycodegen.core", "qualname": "indent", "kind": "function", "doc": "

Indent a LineBuffer by a given level.

\n", "signature": "(lines: list[str], level: int = 1) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.comment": {"fullname": "styx.pycodegen.core.comment", "modulename": "styx.pycodegen.core", "qualname": "comment", "kind": "function", "doc": "

Add a comment to a LineBuffer.

\n", "signature": "(lines: list[str]) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.collapse": {"fullname": "styx.pycodegen.core.collapse", "modulename": "styx.pycodegen.core", "qualname": "collapse", "kind": "function", "doc": "

Collapse a LineBuffer into a single string.

\n", "signature": "(lines: list[str]) -> str:", "funcdef": "def"}, "styx.pycodegen.core.expand": {"fullname": "styx.pycodegen.core.expand", "modulename": "styx.pycodegen.core", "qualname": "expand", "kind": "function", "doc": "

Expand a string into a LineBuffer.

\n", "signature": "(text: str) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.blank_before": {"fullname": "styx.pycodegen.core.blank_before", "modulename": "styx.pycodegen.core", "qualname": "blank_before", "kind": "function", "doc": "

Add blank lines at the beginning of a LineBuffer if it is not empty.

\n", "signature": "(lines: list[str], blanks: int = 1) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.blank_after": {"fullname": "styx.pycodegen.core.blank_after", "modulename": "styx.pycodegen.core", "qualname": "blank_after", "kind": "function", "doc": "

Add blank lines at the end of a LineBuffer if it is not empty.

\n", "signature": "(lines: list[str], blanks: int = 1) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.PyGen": {"fullname": "styx.pycodegen.core.PyGen", "modulename": "styx.pycodegen.core", "qualname": "PyGen", "kind": "class", "doc": "

Helper class that provides a standard way to create an ABC using\ninheritance.

\n", "bases": "abc.ABC"}, "styx.pycodegen.core.PyGen.generate": {"fullname": "styx.pycodegen.core.PyGen.generate", "modulename": "styx.pycodegen.core", "qualname": "PyGen.generate", "kind": "function", "doc": "

\n", "signature": "(self) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.PyGen.text": {"fullname": "styx.pycodegen.core.PyGen.text", "modulename": "styx.pycodegen.core", "qualname": "PyGen.text", "kind": "function", "doc": "

\n", "signature": "(self) -> str:", "funcdef": "def"}, "styx.pycodegen.core.PyArg": {"fullname": "styx.pycodegen.core.PyArg", "modulename": "styx.pycodegen.core", "qualname": "PyArg", "kind": "class", "doc": "

\n"}, "styx.pycodegen.core.PyArg.__init__": {"fullname": "styx.pycodegen.core.PyArg.__init__", "modulename": "styx.pycodegen.core", "qualname": "PyArg.__init__", "kind": "function", "doc": "

\n", "signature": "(name: str, type: str, default: str | None, docstring: str)"}, "styx.pycodegen.core.PyArg.name": {"fullname": "styx.pycodegen.core.PyArg.name", "modulename": "styx.pycodegen.core", "qualname": "PyArg.name", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyArg.type": {"fullname": "styx.pycodegen.core.PyArg.type", "modulename": "styx.pycodegen.core", "qualname": "PyArg.type", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyArg.default": {"fullname": "styx.pycodegen.core.PyArg.default", "modulename": "styx.pycodegen.core", "qualname": "PyArg.default", "kind": "variable", "doc": "

\n", "annotation": ": str | None"}, "styx.pycodegen.core.PyArg.docstring": {"fullname": "styx.pycodegen.core.PyArg.docstring", "modulename": "styx.pycodegen.core", "qualname": "PyArg.docstring", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyFunc": {"fullname": "styx.pycodegen.core.PyFunc", "modulename": "styx.pycodegen.core", "qualname": "PyFunc", "kind": "class", "doc": "

\n", "bases": "PyGen"}, "styx.pycodegen.core.PyFunc.__init__": {"fullname": "styx.pycodegen.core.PyFunc.__init__", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.__init__", "kind": "function", "doc": "

\n", "signature": "(\tname: str,\targs: list[styx.pycodegen.core.PyArg],\tdocstring_body: str,\tbody: list[str],\treturn_descr: str,\treturn_type: str | None = None)"}, "styx.pycodegen.core.PyFunc.name": {"fullname": "styx.pycodegen.core.PyFunc.name", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.name", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyFunc.args": {"fullname": "styx.pycodegen.core.PyFunc.args", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.args", "kind": "variable", "doc": "

\n", "annotation": ": list[styx.pycodegen.core.PyArg]"}, "styx.pycodegen.core.PyFunc.docstring_body": {"fullname": "styx.pycodegen.core.PyFunc.docstring_body", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.docstring_body", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyFunc.body": {"fullname": "styx.pycodegen.core.PyFunc.body", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.body", "kind": "variable", "doc": "

\n", "annotation": ": list[str]"}, "styx.pycodegen.core.PyFunc.return_descr": {"fullname": "styx.pycodegen.core.PyFunc.return_descr", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.return_descr", "kind": "variable", "doc": "

\n", "annotation": ": str"}, "styx.pycodegen.core.PyFunc.return_type": {"fullname": "styx.pycodegen.core.PyFunc.return_type", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.return_type", "kind": "variable", "doc": "

\n", "annotation": ": str | None", "default_value": "None"}, "styx.pycodegen.core.PyFunc.generate": {"fullname": "styx.pycodegen.core.PyFunc.generate", "modulename": "styx.pycodegen.core", "qualname": "PyFunc.generate", "kind": "function", "doc": "

\n", "signature": "(self) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.core.PyModule": {"fullname": "styx.pycodegen.core.PyModule", "modulename": "styx.pycodegen.core", "qualname": "PyModule", "kind": "class", "doc": "

\n", "bases": "PyGen"}, "styx.pycodegen.core.PyModule.__init__": {"fullname": "styx.pycodegen.core.PyModule.__init__", "modulename": "styx.pycodegen.core", "qualname": "PyModule.__init__", "kind": "function", "doc": "

\n", "signature": "(\timports: list[str] = <factory>,\theader: list[str] = <factory>,\tfuncs: list[styx.pycodegen.core.PyFunc] = <factory>,\tfooter: list[str] = <factory>)"}, "styx.pycodegen.core.PyModule.imports": {"fullname": "styx.pycodegen.core.PyModule.imports", "modulename": "styx.pycodegen.core", "qualname": "PyModule.imports", "kind": "variable", "doc": "

\n", "annotation": ": list[str]"}, "styx.pycodegen.core.PyModule.header": {"fullname": "styx.pycodegen.core.PyModule.header", "modulename": "styx.pycodegen.core", "qualname": "PyModule.header", "kind": "variable", "doc": "

\n", "annotation": ": list[str]"}, "styx.pycodegen.core.PyModule.funcs": {"fullname": "styx.pycodegen.core.PyModule.funcs", "modulename": "styx.pycodegen.core", "qualname": "PyModule.funcs", "kind": "variable", "doc": "

\n", "annotation": ": list[styx.pycodegen.core.PyFunc]"}, "styx.pycodegen.core.PyModule.footer": {"fullname": "styx.pycodegen.core.PyModule.footer", "modulename": "styx.pycodegen.core", "qualname": "PyModule.footer", "kind": "variable", "doc": "

\n", "annotation": ": list[str]"}, "styx.pycodegen.core.PyModule.generate": {"fullname": "styx.pycodegen.core.PyModule.generate", "modulename": "styx.pycodegen.core", "qualname": "PyModule.generate", "kind": "function", "doc": "

\n", "signature": "(self) -> list[str]:", "funcdef": "def"}, "styx.pycodegen.format": {"fullname": "styx.pycodegen.format", "modulename": "styx.pycodegen.format", "kind": "module", "doc": "

Format code using ruff.

\n"}, "styx.pycodegen.format.format_code": {"fullname": "styx.pycodegen.format.format_code", "modulename": "styx.pycodegen.format", "qualname": "format_code", "kind": "function", "doc": "

Format code using ruff.

\n", "signature": "(code: str) -> str | None:", "funcdef": "def"}, "styx.pycodegen.scope": {"fullname": "styx.pycodegen.scope", "modulename": "styx.pycodegen.scope", "kind": "module", "doc": "

\n"}, "styx.pycodegen.scope.Scope": {"fullname": "styx.pycodegen.scope.Scope", "modulename": "styx.pycodegen.scope", "qualname": "Scope", "kind": "class", "doc": "

A scope for Python symbols.

\n"}, "styx.pycodegen.scope.Scope.__init__": {"fullname": "styx.pycodegen.scope.Scope.__init__", "modulename": "styx.pycodegen.scope", "qualname": "Scope.__init__", "kind": "function", "doc": "

Create a scope.

\n", "signature": "(parent: styx.pycodegen.scope.Scope | None = None)"}, "styx.pycodegen.scope.Scope.parent": {"fullname": "styx.pycodegen.scope.Scope.parent", "modulename": "styx.pycodegen.scope", "qualname": "Scope.parent", "kind": "variable", "doc": "

\n", "annotation": ": styx.pycodegen.scope.Scope | None"}, "styx.pycodegen.scope.Scope.add_or_dodge": {"fullname": "styx.pycodegen.scope.Scope.add_or_dodge", "modulename": "styx.pycodegen.scope", "qualname": "Scope.add_or_dodge", "kind": "function", "doc": "

Add a symbol to the scope, avoiding collisions.

\n", "signature": "(self, symbol: str) -> str:", "funcdef": "def"}, "styx.pycodegen.scope.Scope.add_or_die": {"fullname": "styx.pycodegen.scope.Scope.add_or_die", "modulename": "styx.pycodegen.scope", "qualname": "Scope.add_or_die", "kind": "function", "doc": "

Add a symbol to the scope.

\n", "signature": "(self, symbol: str) -> str:", "funcdef": "def"}, "styx.pycodegen.scope.Scope.python": {"fullname": "styx.pycodegen.scope.Scope.python", "modulename": "styx.pycodegen.scope", "qualname": "Scope.python", "kind": "function", "doc": "

Create a scope with all Python keywords, standard library modules, and builtins.

\n", "signature": "(cls) -> styx.pycodegen.scope.Scope:", "funcdef": "def"}, "styx.pycodegen.utils": {"fullname": "styx.pycodegen.utils", "modulename": "styx.pycodegen.utils", "kind": "module", "doc": "

\n"}, "styx.pycodegen.utils.ensure_python_symbol": {"fullname": "styx.pycodegen.utils.ensure_python_symbol", "modulename": "styx.pycodegen.utils", "qualname": "ensure_python_symbol", "kind": "function", "doc": "

Ensure that a string is a valid Python symbol.

\n\n
Arguments:
\n\n
    \n
  • name (str): The string to be converted.
    • \n
\n\n
Returns:
\n\n
\n

str: A valid Python symbol.

\n
\n", "signature": "(name: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.ensure_snake_case": {"fullname": "styx.pycodegen.utils.ensure_snake_case", "modulename": "styx.pycodegen.utils", "qualname": "ensure_snake_case", "kind": "function", "doc": "

Converts a string to snake case.

\n\n

Consecutive uppercase letters do not receive underscores between them.

\n\n
Arguments:
\n\n
    \n
  • string: The string to convert.
    • \n
\n\n
Returns:
\n\n
\n

The converted string.

\n
\n", "signature": "(string: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.ensure_camel_case": {"fullname": "styx.pycodegen.utils.ensure_camel_case", "modulename": "styx.pycodegen.utils", "qualname": "ensure_camel_case", "kind": "function", "doc": "

Converts a string to camel case.

\n\n
Arguments:
\n\n
    \n
  • string: The string to convert.
    • \n
\n\n
Returns:
\n\n
\n

The converted string.

\n
\n", "signature": "(string: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.python_camelize": {"fullname": "styx.pycodegen.utils.python_camelize", "modulename": "styx.pycodegen.utils", "qualname": "python_camelize", "kind": "function", "doc": "

Converts a string to camel case.

\n\n
Arguments:
\n\n
    \n
  • string: The string to convert.
    • \n
\n\n
Returns:
\n\n
\n

The converted string.

\n
\n", "signature": "(string: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.python_snakify": {"fullname": "styx.pycodegen.utils.python_snakify", "modulename": "styx.pycodegen.utils", "qualname": "python_snakify", "kind": "function", "doc": "

Converts a string to snake case.

\n\n
Arguments:
\n\n
    \n
  • string: The string to convert.
    • \n
\n\n
Returns:
\n\n
\n

The converted string.

\n
\n", "signature": "(string: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.python_screaming_snakify": {"fullname": "styx.pycodegen.utils.python_screaming_snakify", "modulename": "styx.pycodegen.utils", "qualname": "python_screaming_snakify", "kind": "function", "doc": "

Converts a string to screaming snake case.

\n\n
Arguments:
\n\n
    \n
  • string: The string to convert.
    • \n
\n\n
Returns:
\n\n
\n

The converted string.

\n
\n", "signature": "(string: str) -> str:", "funcdef": "def"}, "styx.pycodegen.utils.enquote": {"fullname": "styx.pycodegen.utils.enquote", "modulename": "styx.pycodegen.utils", "qualname": "enquote", "kind": "function", "doc": "

Put a string in \"quotes\".

\n", "signature": "(s: str, quote: str = '"') -> str:", "funcdef": "def"}, "styx.pycodegen.utils.enbrace": {"fullname": "styx.pycodegen.utils.enbrace", "modulename": "styx.pycodegen.utils", "qualname": "enbrace", "kind": "function", "doc": "

Put a string in {braces}.

\n", "signature": "(s: str, brace_type: str = '{') -> str:", "funcdef": "def"}, "styx.pycodegen.utils.as_py_literal": {"fullname": "styx.pycodegen.utils.as_py_literal", "modulename": "styx.pycodegen.utils", "qualname": "as_py_literal", "kind": "function", "doc": "

Convert an object to a Python literal expression.

\n", "signature": "(\tobj: Union[str, float, int, bool, list[Union[str, float, int, bool, list[ForwardRef('_TYPE_PYLITERAL')]]]],\tquote: str = '"') -> str:", "funcdef": "def"}, "styx.runners": {"fullname": "styx.runners", "modulename": "styx.runners", "kind": "module", "doc": "

Example runners.

\n"}, "styx.runners.docker": {"fullname": "styx.runners.docker", "modulename": "styx.runners.docker", "kind": "module", "doc": "

\n"}, "styx.runners.docker.DockerExecution": {"fullname": "styx.runners.docker.DockerExecution", "modulename": "styx.runners.docker", "qualname": "DockerExecution", "kind": "class", "doc": "

Execution object used to execute commands.

\n\n

Created by Runner.start_execution().

\n", "bases": "styx.runners.styxdefs.Execution[pathlib.Path, pathlib.Path]"}, "styx.runners.docker.DockerExecution.__init__": {"fullname": "styx.runners.docker.DockerExecution.__init__", "modulename": "styx.runners.docker", "qualname": "DockerExecution.__init__", "kind": "function", "doc": "

\n", "signature": "(metadata: styx.runners.styxdefs.Metadata, output_dir: pathlib.Path)"}, "styx.runners.docker.DockerExecution.metadata": {"fullname": "styx.runners.docker.DockerExecution.metadata", "modulename": "styx.runners.docker", "qualname": "DockerExecution.metadata", "kind": "variable", "doc": "

\n"}, "styx.runners.docker.DockerExecution.input_files": {"fullname": "styx.runners.docker.DockerExecution.input_files", "modulename": "styx.runners.docker", "qualname": "DockerExecution.input_files", "kind": "variable", "doc": "

\n", "annotation": ": list[tuple[pathlib.Path, str]]"}, "styx.runners.docker.DockerExecution.input_file_next_id": {"fullname": "styx.runners.docker.DockerExecution.input_file_next_id", "modulename": "styx.runners.docker", "qualname": "DockerExecution.input_file_next_id", "kind": "variable", "doc": "

\n"}, "styx.runners.docker.DockerExecution.output_files": {"fullname": "styx.runners.docker.DockerExecution.output_files", "modulename": "styx.runners.docker", "qualname": "DockerExecution.output_files", "kind": "variable", "doc": "

\n", "annotation": ": list[tuple[pathlib.Path, str]]"}, "styx.runners.docker.DockerExecution.output_file_next_id": {"fullname": "styx.runners.docker.DockerExecution.output_file_next_id", "modulename": "styx.runners.docker", "qualname": "DockerExecution.output_file_next_id", "kind": "variable", "doc": "

\n"}, "styx.runners.docker.DockerExecution.output_dir": {"fullname": "styx.runners.docker.DockerExecution.output_dir", "modulename": "styx.runners.docker", "qualname": "DockerExecution.output_dir", "kind": "variable", "doc": "

\n"}, "styx.runners.docker.DockerExecution.input_file": {"fullname": "styx.runners.docker.DockerExecution.input_file", "modulename": "styx.runners.docker", "qualname": "DockerExecution.input_file", "kind": "function", "doc": "

Resolve host input files.

\n\n

Returns a local filepath.\nCalled (potentially multiple times) after\nRunner.start_execution() and before Runner.run().

\n", "signature": "(self, host_file: pathlib.Path) -> str:", "funcdef": "def"}, "styx.runners.docker.DockerExecution.output_file": {"fullname": "styx.runners.docker.DockerExecution.output_file", "modulename": "styx.runners.docker", "qualname": "DockerExecution.output_file", "kind": "function", "doc": "

Resolve local output files.

\n\n

Returns a host filepath.\nCalled (potentially multiple times) after all\nRunner.input_file() calls.

\n", "signature": "(self, local_file: str, optional: bool = False) -> pathlib.Path:", "funcdef": "def"}, "styx.runners.docker.DockerExecution.run": {"fullname": "styx.runners.docker.DockerExecution.run", "modulename": "styx.runners.docker", "qualname": "DockerExecution.run", "kind": "function", "doc": "

Run the command.

\n\n

Called after all Execution.input_file()\nand Execution.output_file() calls.

\n", "signature": "(self, cargs: list[str]) -> None:", "funcdef": "def"}, "styx.runners.docker.DockerRunner": {"fullname": "styx.runners.docker.DockerRunner", "modulename": "styx.runners.docker", "qualname": "DockerRunner", "kind": "class", "doc": "

Runner object used to execute commands.

\n\n

Possible examples would be LocalRunner,\nDockerRunner, DebugRunner, ...\nUsed as a factory for Execution objects.

\n", "bases": "styx.runners.styxdefs.Runner[pathlib.Path, pathlib.Path]"}, "styx.runners.docker.DockerRunner.__init__": {"fullname": "styx.runners.docker.DockerRunner.__init__", "modulename": "styx.runners.docker", "qualname": "DockerRunner.__init__", "kind": "function", "doc": "

Create a new DockerRunner.

\n\n
Arguments:
\n\n
    \n
  • execution_output_dir: A function that returns the output directory for a given Metadata.\nIf None, a folder named 'output_' will be used.\nThis function is called once before every execution.
    • \n
\n", "signature": "(\texecution_output_dir: Optional[Callable[[styx.runners.styxdefs.Metadata], pathlib.Path]] = None)"}, "styx.runners.docker.DockerRunner.execution_output_dir": {"fullname": "styx.runners.docker.DockerRunner.execution_output_dir", "modulename": "styx.runners.docker", "qualname": "DockerRunner.execution_output_dir", "kind": "variable", "doc": "

\n", "annotation": ": Callable[[styx.runners.styxdefs.Metadata], pathlib.Path]"}, "styx.runners.docker.DockerRunner.start_execution": {"fullname": "styx.runners.docker.DockerRunner.start_execution", "modulename": "styx.runners.docker", "qualname": "DockerRunner.start_execution", "kind": "function", "doc": "

Start an execution.

\n\n

Called before any Execution.input_file() calls.

\n", "signature": "(\tself,\tmetadata: styx.runners.styxdefs.Metadata) -> styx.runners.styxdefs.Execution[pathlib.Path, pathlib.Path]:", "funcdef": "def"}, "styx.runners.dummy": {"fullname": "styx.runners.dummy", "modulename": "styx.runners.dummy", "kind": "module", "doc": "

\n"}, "styx.runners.dummy.DummyRunner": {"fullname": "styx.runners.dummy.DummyRunner", "modulename": "styx.runners.dummy", "qualname": "DummyRunner", "kind": "class", "doc": "

Runner object used to execute commands.

\n\n

Possible examples would be LocalRunner,\nDockerRunner, DebugRunner, ...\nUsed as a factory for Execution objects.

\n", "bases": "styx.runners.styxdefs.Runner[str, str], styx.runners.styxdefs.Execution[str, str]"}, "styx.runners.dummy.DummyRunner.last_cargs": {"fullname": "styx.runners.dummy.DummyRunner.last_cargs", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.last_cargs", "kind": "variable", "doc": "

\n", "annotation": ": list[str] | None"}, "styx.runners.dummy.DummyRunner.last_metadata": {"fullname": "styx.runners.dummy.DummyRunner.last_metadata", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.last_metadata", "kind": "variable", "doc": "

\n", "annotation": ": styx.runners.styxdefs.Metadata | None"}, "styx.runners.dummy.DummyRunner.start_execution": {"fullname": "styx.runners.dummy.DummyRunner.start_execution", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.start_execution", "kind": "function", "doc": "

Start an execution.

\n\n

Called before any Execution.input_file() calls.

\n", "signature": "(\tself,\tmetadata: styx.runners.styxdefs.Metadata) -> styx.runners.styxdefs.Execution[str, str]:", "funcdef": "def"}, "styx.runners.dummy.DummyRunner.input_file": {"fullname": "styx.runners.dummy.DummyRunner.input_file", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.input_file", "kind": "function", "doc": "

Resolve host input files.

\n\n

Returns a local filepath.\nCalled (potentially multiple times) after\nRunner.start_execution() and before Runner.run().

\n", "signature": "(self, host_file: str) -> str:", "funcdef": "def"}, "styx.runners.dummy.DummyRunner.output_file": {"fullname": "styx.runners.dummy.DummyRunner.output_file", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.output_file", "kind": "function", "doc": "

Resolve local output files.

\n\n

Returns a host filepath.\nCalled (potentially multiple times) after all\nRunner.input_file() calls.

\n", "signature": "(self, local_file: str, optional: bool = False) -> str:", "funcdef": "def"}, "styx.runners.dummy.DummyRunner.run": {"fullname": "styx.runners.dummy.DummyRunner.run", "modulename": "styx.runners.dummy", "qualname": "DummyRunner.run", "kind": "function", "doc": "

Run the command.

\n\n

Called after all Execution.input_file()\nand Execution.output_file() calls.

\n", "signature": "(self, cargs: list[str]) -> None:", "funcdef": "def"}, "styx.runners.styxdefs": {"fullname": "styx.runners.styxdefs", "modulename": "styx.runners.styxdefs", "kind": "module", "doc": "

\n"}, "styx.runners.styxdefs.P": {"fullname": "styx.runners.styxdefs.P", "modulename": "styx.runners.styxdefs", "qualname": "P", "kind": "variable", "doc": "

Input host file type.

\n", "default_value": "-P"}, "styx.runners.styxdefs.R": {"fullname": "styx.runners.styxdefs.R", "modulename": "styx.runners.styxdefs", "qualname": "R", "kind": "variable", "doc": "

Output host file type.

\n", "default_value": "+R"}, "styx.runners.styxdefs.Execution": {"fullname": "styx.runners.styxdefs.Execution", "modulename": "styx.runners.styxdefs", "qualname": "Execution", "kind": "class", "doc": "

Execution object used to execute commands.

\n\n

Created by Runner.start_execution().

\n", "bases": "typing.Protocol[-P, +R]"}, "styx.runners.styxdefs.Execution.__init__": {"fullname": "styx.runners.styxdefs.Execution.__init__", "modulename": "styx.runners.styxdefs", "qualname": "Execution.__init__", "kind": "function", "doc": "

\n", "signature": "(*args, **kwargs)"}, "styx.runners.styxdefs.Execution.input_file": {"fullname": "styx.runners.styxdefs.Execution.input_file", "modulename": "styx.runners.styxdefs", "qualname": "Execution.input_file", "kind": "function", "doc": "

Resolve host input files.

\n\n

Returns a local filepath.\nCalled (potentially multiple times) after\nRunner.start_execution() and before Runner.run().

\n", "signature": "(self, host_file: -P) -> str:", "funcdef": "def"}, "styx.runners.styxdefs.Execution.run": {"fullname": "styx.runners.styxdefs.Execution.run", "modulename": "styx.runners.styxdefs", "qualname": "Execution.run", "kind": "function", "doc": "

Run the command.

\n\n

Called after all Execution.input_file()\nand Execution.output_file() calls.

\n", "signature": "(self, cargs: list[str]) -> None:", "funcdef": "def"}, "styx.runners.styxdefs.Execution.output_file": {"fullname": "styx.runners.styxdefs.Execution.output_file", "modulename": "styx.runners.styxdefs", "qualname": "Execution.output_file", "kind": "function", "doc": "

Resolve local output files.

\n\n

Returns a host filepath.\nCalled (potentially multiple times) after all\nRunner.input_file() calls.

\n", "signature": "(self, local_file: str, optional: bool = False) -> +R:", "funcdef": "def"}, "styx.runners.styxdefs.Metadata": {"fullname": "styx.runners.styxdefs.Metadata", "modulename": "styx.runners.styxdefs", "qualname": "Metadata", "kind": "class", "doc": "

Static tool metadata.

\n\n

This is structured static metadata that is known at compile time.\nRunners can use this to set up execution environments.

\n", "bases": "typing.NamedTuple"}, "styx.runners.styxdefs.Metadata.__init__": {"fullname": "styx.runners.styxdefs.Metadata.__init__", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.__init__", "kind": "function", "doc": "

Create new instance of Metadata(id, name, container_image_type, container_image_tag, container_image_index, container_image_opts)

\n", "signature": "(\tid: str,\tname: str,\tcontainer_image_type: str | None = None,\tcontainer_image_tag: str | None = None,\tcontainer_image_index: str | None = None,\tcontainer_image_opts: str | None = None)"}, "styx.runners.styxdefs.Metadata.id": {"fullname": "styx.runners.styxdefs.Metadata.id", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.id", "kind": "variable", "doc": "

Unique identifier of the tool.

\n", "annotation": ": str"}, "styx.runners.styxdefs.Metadata.name": {"fullname": "styx.runners.styxdefs.Metadata.name", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.name", "kind": "variable", "doc": "

Name of the tool.

\n", "annotation": ": str"}, "styx.runners.styxdefs.Metadata.container_image_type": {"fullname": "styx.runners.styxdefs.Metadata.container_image_type", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.container_image_type", "kind": "variable", "doc": "

Type of container image. Example: docker, singularity.

\n", "annotation": ": str | None"}, "styx.runners.styxdefs.Metadata.container_image_tag": {"fullname": "styx.runners.styxdefs.Metadata.container_image_tag", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.container_image_tag", "kind": "variable", "doc": "

Name of an image where the tool is installed and configured. Example: bids/mriqc.

\n", "annotation": ": str | None"}, "styx.runners.styxdefs.Metadata.container_image_index": {"fullname": "styx.runners.styxdefs.Metadata.container_image_index", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.container_image_index", "kind": "variable", "doc": "

Optional index where the image is available, if not the standard location. Example: docker.io

\n", "annotation": ": str | None"}, "styx.runners.styxdefs.Metadata.container_image_opts": {"fullname": "styx.runners.styxdefs.Metadata.container_image_opts", "modulename": "styx.runners.styxdefs", "qualname": "Metadata.container_image_opts", "kind": "variable", "doc": "

Container-level arguments for the application. Example: --privileged

\n", "annotation": ": str | None"}, "styx.runners.styxdefs.Runner": {"fullname": "styx.runners.styxdefs.Runner", "modulename": "styx.runners.styxdefs", "qualname": "Runner", "kind": "class", "doc": "

Runner object used to execute commands.

\n\n

Possible examples would be LocalRunner,\nDockerRunner, DebugRunner, ...\nUsed as a factory for Execution objects.

\n", "bases": "typing.Protocol[-P, +R]"}, "styx.runners.styxdefs.Runner.__init__": {"fullname": "styx.runners.styxdefs.Runner.__init__", "modulename": "styx.runners.styxdefs", "qualname": "Runner.__init__", "kind": "function", "doc": "

\n", "signature": "(*args, **kwargs)"}, "styx.runners.styxdefs.Runner.start_execution": {"fullname": "styx.runners.styxdefs.Runner.start_execution", "modulename": "styx.runners.styxdefs", "qualname": "Runner.start_execution", "kind": "function", "doc": "

Start an execution.

\n\n

Called before any Execution.input_file() calls.

\n", "signature": "(\tself,\tmetadata: styx.runners.styxdefs.Metadata) -> styx.runners.styxdefs.Execution[-P, +R]:", "funcdef": "def"}}, "docInfo": {"styx": {"qualname": 0, "fullname": 1, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 202}, "styx.boutiques": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 39}, "styx.boutiques.model": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.Type.docker": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type.singularity": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.ContainerImageItem.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.image": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.index": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.container_opts": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.working_directory": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.container_hash": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 178, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.Type1.rootfs": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.ContainerImageItem1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.url": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 89, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.ContainerImage1.working_directory": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage1.container_hash": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 64, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage2": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 380}, "styx.boutiques.model.ContainerImage2.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage2.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 178, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage3": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 380}, "styx.boutiques.model.ContainerImage3.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage3.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 89, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ContainerImage": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 5, "doc": 92}, "styx.boutiques.model.ContainerImage.root": {"qualname": 2, "fullname": 5, "annotation": 9, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SchemaVersion": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.SchemaVersion.field_0_5": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 12, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.EnvironmentVariable.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable.name": {"qualname": 2, "fullname": 5, "annotation": 33, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable.value": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 98, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.Group.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.id": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.members": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.mutually_exclusive": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.one_is_required": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.all_or_none": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 256, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Group.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type2": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.Type2.Flag": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ListModel": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.ListModel.bool_False": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 8, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.Input.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input.list": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 22, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type3": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.Type3.String": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type3.File": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type3.Number": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.Input1.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 12, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Input1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type4": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.Type4.String": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type4.File": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type4.Flag": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Type4.Number": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 380}, "styx.boutiques.model.Inputs.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.id": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.value_key": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.list": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.list_separator": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.optional": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.command_line_flag": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.requires_inputs": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.disables_inputs": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.default_value": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.value_choices": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.value_requires": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.value_disables": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.integer": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.minimum": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.maximum": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.exclusive_minimum": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.exclusive_maximum": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.min_list_entries": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.max_list_entries": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.uses_absolute_path": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 906, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 380}, "styx.boutiques.model.Inputs1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.id": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.type": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.value_key": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.list": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.list_separator": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.optional": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.command_line_flag": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.requires_inputs": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.disables_inputs": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.default_value": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.value_choices": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.value_requires": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.value_disables": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.integer": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.minimum": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.maximum": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.min_list_entries": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.max_list_entries": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 906, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Inputs1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Test": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.Test.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Test.invocation": {"qualname": 2, "fullname": 5, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Test.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Test.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 51, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Test.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.OutputFile.file_template": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile.list": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 37, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.FileTemplate": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.boutiques.model.FileTemplate.bool_False": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 8, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.OutputFile1.file_template": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 21, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ConditionalPathTemplateItem": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 12, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 380}, "styx.boutiques.model.OutputFiles.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.id": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.value_key": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.path_template": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"qualname": 4, "fullname": 7, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.list": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.optional": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.command_line_flag": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.file_template": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 570, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 380}, "styx.boutiques.model.OutputFiles1.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.id": {"qualname": 2, "fullname": 5, "annotation": 30, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.value_key": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.path_template": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"qualname": 4, "fullname": 7, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.list": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.optional": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"qualname": 5, "fullname": 8, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"qualname": 4, "fullname": 7, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.file_template": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 570, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"qualname": 3, "fullname": 6, "annotation": 13, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.ram": {"qualname": 2, "fullname": 5, "annotation": 15, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.disk_space": {"qualname": 3, "fullname": 6, "annotation": 15, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.nodes": {"qualname": 2, "fullname": 5, "annotation": 13, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"qualname": 3, "fullname": 6, "annotation": 15, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 165, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ErrorCode": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.ErrorCode.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ErrorCode.code": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ErrorCode.description": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ErrorCode.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 36, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 3, "doc": 380}, "styx.boutiques.model.Tool.model_config": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 9, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.name": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.tool_version": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.description": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.deprecated_by_doi": {"qualname": 4, "fullname": 7, "annotation": 25, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.author": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.url": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.descriptor_url": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.doi": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.shell": {"qualname": 2, "fullname": 5, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.tool_doi": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.command_line": {"qualname": 3, "fullname": 6, "annotation": 23, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.container_image": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.schema_version": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.environment_variables": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.groups": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.inputs": {"qualname": 2, "fullname": 5, "annotation": 9, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.tests": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.online_platform_urls": {"qualname": 4, "fullname": 7, "annotation": 25, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.output_files": {"qualname": 3, "fullname": 6, "annotation": 9, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.invocation_schema": {"qualname": 3, "fullname": 6, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.suggested_resources": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.tags": {"qualname": 2, "fullname": 5, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.error_codes": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.custom": {"qualname": 2, "fullname": 5, "annotation": 3, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.model_fields": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 765, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.model.Tool.model_computed_fields": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.utils": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.boutiques.utils.boutiques_from_dict": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 34, "bases": 0, "doc": 44}, "styx.boutiques.utils.boutiques_split_command": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 25, "bases": 0, "doc": 45}, "styx.cli": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 8}, "styx.compiler": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "styx.compiler.core": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtPrimitive": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 336}, "styx.compiler.core.BtPrimitive.String": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtPrimitive.Number": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtPrimitive.Integer": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtPrimitive.File": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtPrimitive.Flag": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtType": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtType.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 66, "bases": 0, "doc": 3}, "styx.compiler.core.BtType.primitive": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtType.is_list": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtType.is_optional": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtType.is_enum": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 57, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.bt_ref": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.py_symbol": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.docstring": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.command_line_flag": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.list_separator": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.minimum": {"qualname": 2, "fullname": 5, "annotation": 6, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.minimum_exclusive": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.maximum": {"qualname": 2, "fullname": 5, "annotation": 6, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.maximum_exclusive": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.list_minimum": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.list_maximum": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.py_type": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.py_default": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.py_expr": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"qualname": 6, "fullname": 9, "annotation": 0, "default_value": 0, "signature": 57, "bases": 0, "doc": 3}, "styx.compiler.core.BtInput.py_expr_is_set": {"qualname": 5, "fullname": 8, "annotation": 0, "default_value": 0, "signature": 14, "bases": 0, "doc": 3}, "styx.compiler.core.compile_descriptor": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 61, "bases": 0, "doc": 10}, "styx.compiler.defs": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 10}, "styx.compiler.defs.STYX_DEFINITIONS": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 345, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.settings": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 5}, "styx.compiler.settings.DefsMode": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 6}, "styx.compiler.settings.DefsMode.INLINE": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.settings.DefsMode.IMPORT": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 8, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.settings.CompilerSettings": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.settings.CompilerSettings.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 55, "bases": 0, "doc": 3}, "styx.compiler.settings.CompilerSettings.defs_mode": {"qualname": 3, "fullname": 6, "annotation": 5, "default_value": 7, "signature": 0, "bases": 0, "doc": 3}, "styx.compiler.utils": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 5}, "styx.compiler.utils.optional_float_to_int": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 31, "bases": 0, "doc": 11}, "styx.main": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.main.main": {"qualname": 1, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 10, "bases": 0, "doc": 3}, "styx.pycodegen": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 11}, "styx.pycodegen.core": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 11}, "styx.pycodegen.core.LineBuffer": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.INDENT": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 4, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.indent": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 48, "bases": 0, "doc": 10}, "styx.pycodegen.core.comment": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 31, "bases": 0, "doc": 9}, "styx.pycodegen.core.collapse": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 25, "bases": 0, "doc": 10}, "styx.pycodegen.core.expand": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 25, "bases": 0, "doc": 9}, "styx.pycodegen.core.blank_before": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 48, "bases": 0, "doc": 17}, "styx.pycodegen.core.blank_after": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 48, "bases": 0, "doc": 17}, "styx.pycodegen.core.PyGen": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 16}, "styx.pycodegen.core.PyGen.generate": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 20, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyGen.text": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 14, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 50, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg.name": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg.type": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg.default": {"qualname": 2, "fullname": 5, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyArg.docstring": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 3}, "styx.pycodegen.core.PyFunc.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 113, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.name": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.args": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.docstring_body": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.body": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.return_descr": {"qualname": 3, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.return_type": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyFunc.generate": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 20, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 1, "doc": 3}, "styx.pycodegen.core.PyModule.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 147, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule.imports": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule.header": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule.funcs": {"qualname": 2, "fullname": 5, "annotation": 5, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule.footer": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.core.PyModule.generate": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 20, "bases": 0, "doc": 3}, "styx.pycodegen.format": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "styx.pycodegen.format.format_code": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 25, "bases": 0, "doc": 7}, "styx.pycodegen.scope": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.scope.Scope": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 8}, "styx.pycodegen.scope.Scope.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 42, "bases": 0, "doc": 6}, "styx.pycodegen.scope.Scope.parent": {"qualname": 2, "fullname": 5, "annotation": 7, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.scope.Scope.add_or_dodge": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 24, "bases": 0, "doc": 11}, "styx.pycodegen.scope.Scope.add_or_die": {"qualname": 4, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 24, "bases": 0, "doc": 9}, "styx.pycodegen.scope.Scope.python": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 29, "bases": 0, "doc": 15}, "styx.pycodegen.utils": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.pycodegen.utils.ensure_python_symbol": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 47}, "styx.pycodegen.utils.ensure_snake_case": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 51}, "styx.pycodegen.utils.ensure_camel_case": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 39}, "styx.pycodegen.utils.python_camelize": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 39}, "styx.pycodegen.utils.python_snakify": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 39}, "styx.pycodegen.utils.python_screaming_snakify": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 19, "bases": 0, "doc": 40}, "styx.pycodegen.utils.enquote": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 40, "bases": 0, "doc": 8}, "styx.pycodegen.utils.enbrace": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 41, "bases": 0, "doc": 8}, "styx.pycodegen.utils.as_py_literal": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 119, "bases": 0, "doc": 11}, "styx.runners": {"qualname": 0, "fullname": 2, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 5}, "styx.runners.docker": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.docker.DockerExecution": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 7, "doc": 20}, "styx.runners.docker.DockerExecution.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 45, "bases": 0, "doc": 3}, "styx.runners.docker.DockerExecution.metadata": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.docker.DockerExecution.input_files": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.docker.DockerExecution.input_file_next_id": {"qualname": 5, "fullname": 8, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.docker.DockerExecution.output_files": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.docker.DockerExecution.output_file_next_id": {"qualname": 5, "fullname": 8, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.docker.DockerExecution.output_dir": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.docker.DockerExecution.input_file": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 30, "bases": 0, "doc": 32}, "styx.runners.docker.DockerExecution.output_file": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 47, "bases": 0, "doc": 27}, "styx.runners.docker.DockerExecution.run": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 30, "bases": 0, "doc": 26}, "styx.runners.docker.DockerRunner": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 7, "doc": 34}, "styx.runners.docker.DockerRunner.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 60, "bases": 0, "doc": 52}, "styx.runners.docker.DockerRunner.execution_output_dir": {"qualname": 4, "fullname": 7, "annotation": 7, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.docker.DockerRunner.start_execution": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 78, "bases": 0, "doc": 19}, "styx.runners.dummy": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.dummy.DummyRunner": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 10, "doc": 34}, "styx.runners.dummy.DummyRunner.last_cargs": {"qualname": 3, "fullname": 6, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.dummy.DummyRunner.last_metadata": {"qualname": 3, "fullname": 6, "annotation": 7, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.dummy.DummyRunner.start_execution": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 68, "bases": 0, "doc": 19}, "styx.runners.dummy.DummyRunner.input_file": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 25, "bases": 0, "doc": 32}, "styx.runners.dummy.DummyRunner.output_file": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 42, "bases": 0, "doc": 27}, "styx.runners.dummy.DummyRunner.run": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 30, "bases": 0, "doc": 26}, "styx.runners.styxdefs": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "styx.runners.styxdefs.P": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 2, "signature": 0, "bases": 0, "doc": 7}, "styx.runners.styxdefs.R": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 7}, "styx.runners.styxdefs.Execution": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 4, "doc": 20}, "styx.runners.styxdefs.Execution.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 18, "bases": 0, "doc": 3}, "styx.runners.styxdefs.Execution.input_file": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 28, "bases": 0, "doc": 32}, "styx.runners.styxdefs.Execution.run": {"qualname": 2, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 30, "bases": 0, "doc": 26}, "styx.runners.styxdefs.Execution.output_file": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 44, "bases": 0, "doc": 27}, "styx.runners.styxdefs.Metadata": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 29}, "styx.runners.styxdefs.Metadata.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 130, "bases": 0, "doc": 22}, "styx.runners.styxdefs.Metadata.id": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 8}, "styx.runners.styxdefs.Metadata.name": {"qualname": 2, "fullname": 5, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "styx.runners.styxdefs.Metadata.container_image_type": {"qualname": 4, "fullname": 7, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 10}, "styx.runners.styxdefs.Metadata.container_image_tag": {"qualname": 4, "fullname": 7, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 16}, "styx.runners.styxdefs.Metadata.container_image_index": {"qualname": 4, "fullname": 7, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 17}, "styx.runners.styxdefs.Metadata.container_image_opts": {"qualname": 4, "fullname": 7, "annotation": 4, "default_value": 0, "signature": 0, "bases": 0, "doc": 10}, "styx.runners.styxdefs.Runner": {"qualname": 1, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 4, "doc": 34}, "styx.runners.styxdefs.Runner.__init__": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 18, "bases": 0, "doc": 3}, "styx.runners.styxdefs.Runner.start_execution": {"qualname": 3, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 73, "bases": 0, "doc": 19}}, "length": 393, "save": true}, "index": {"qualname": {"root": {"0": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1}, "5": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1}, "docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 12, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}}, "df": 2}, "2": {"docs": {"styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}}, "df": 2}, "3": {"docs": {"styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}}, "df": 4}, "4": {"docs": {"styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}}, "df": 14}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}}, "df": 6, "s": {"docs": {"styx.boutiques.model.Tool.tests": {"tf": 1}}, "df": 1}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}}, "df": 10}}}}}}, "x": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.PyGen.text": {"tf": 1}}, "df": 1}}}, "o": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 2, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 28}}}, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.Tool.tags": {"tf": 1}}, "df": 1}}}}, "d": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "x": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.metadata": {"tf": 1}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_dir": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}}, "df": 11}}}}}}}}}, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}}, "df": 4}}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}}, "df": 3}}}}}}}, "i": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}}, "df": 3}, "d": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.docker.DockerExecution.output_dir": {"tf": 1}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}}, "df": 2, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}}, "df": 3}}}}}}}, "s": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}}, "df": 4}}}}}, "k": {"docs": {"styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}}, "df": 1}}, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}, "e": {"docs": {"styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 1}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}}, "df": 8}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 2}}}}}}}}, "f": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}}, "df": 4}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}, "s": {"docs": {"styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 2, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 4}}}}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}}, "df": 7}}}}}}}}}}}, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Type.singularity": {"tf": 1}}, "df": 1}}}}}}}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}}, "df": 2, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 2}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 6}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 1}}}}}}}}, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}}, "df": 3}}, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}}, "df": 2}}}}}}, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 3}}}}, "e": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}}, "df": 7}}}}}}}, "t": {"docs": {"styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}}, "df": 1}}, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 1, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}}, "df": 9}}}}}}}}}}}}}}}}}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}}, "df": 1}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 1}}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool.shell": {"tf": 1}}, "df": 1}}}}, "y": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}}, "df": 2}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}, "i": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 2}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 9, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}}, "df": 6}, "2": {"docs": {"styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}}, "df": 4}, "3": {"docs": {"styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}}, "df": 4}, "docs": {"styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"1": {"docs": {"styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}}, "df": 8}, "docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}}, "df": 11}}}}}}}}}}}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}}, "df": 20}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}}, "df": 2, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}}, "df": 5}}}}}}}}}}}}}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 20}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 1, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings.CompilerSettings": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 3}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 11}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.comment": {"tf": 1}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}}, "df": 1}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 1}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.collapse": {"tf": 1}}, "df": 1}}}}}}}, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}}, "df": 2}}}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}}, "df": 1}}, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.custom": {"tf": 1}}, "df": 1}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 2}}, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.python_camelize": {"tf": 1}}, "df": 1}}}}}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}}, "df": 1}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 1, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 60}}}}, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Group.members": {"tf": 1}}, "df": 1}}}}}, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.runners.docker.DockerExecution.metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 10}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}}, "df": 7}}}}}}, "a": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}}, "df": 7}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.main.main": {"tf": 1}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 6}}}, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.pycodegen.core.PyModule.imports": {"tf": 1}}, "df": 1}}}}}}, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 2}, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.INDENT": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}}, "df": 2}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"1": {"docs": {"styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}}, "df": 11, "s": {"1": {"docs": {"styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}}, "df": 28}, "docs": {"styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}}, "df": 31}}}}, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}}, "df": 3}}}}}, "v": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}}, "df": 2}}}}}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 12}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode.INLINE": {"tf": 1}}, "df": 1}}}}}, "d": {"docs": {"styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}}, "df": 8}, "s": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}}, "df": 5}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}}, "df": 1}}}}}}, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}}, "df": 4}}}}}, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.environment_variables": {"tf": 1}}, "df": 1, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}}, "df": 7}}}}}}}}}}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.compiler.core.BtType.is_enum": {"tf": 1}}, "df": 1}}, "s": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 3}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}}, "df": 1}}}}}, "b": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 1}}}}}}, "x": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}}, "df": 7}}}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}}, "df": 2}}}}}}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}}, "df": 2}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.core.expand": {"tf": 1}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 9}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 1}}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 1, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}}, "df": 6}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 2}, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 6}}}}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}}, "df": 1}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}, "y": {"docs": {"styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 1}}}, "r": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 3}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_dir": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 8, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}}, "df": 6, "s": {"1": {"docs": {"styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}}, "df": 17}, "docs": {"styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}}, "df": 17}}}}}}}}}}}, "w": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}}, "df": 3}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 1}}}}}}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}}, "df": 3}}}, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.header": {"tf": 1}}, "df": 1}}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 40}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 15, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}}}}}}}, "s": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}}, "df": 3}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 12}}, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyModule.funcs": {"tf": 1}}, "df": 1}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.footer": {"tf": 1}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.format.format_code": {"tf": 1}}, "df": 1}}}}}}, "r": {"docs": {"styx.runners.styxdefs.R": {"tf": 1}}, "df": 1, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 1, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type1.rootfs": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}}, "df": 1}, "s": {"docs": {"styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}}, "df": 4}}}}}}, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 1}}}}}}}, "f": {"docs": {"styx.compiler.core.BtInput.bt_ref": {"tf": 1}}, "df": 1}, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}}, "df": 2}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.SuggestedResources.ram": {"tf": 1}}, "df": 1}}, "u": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}}, "df": 3, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 3}}}}}}, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}}, "df": 3, "s": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 4}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}}, "df": 11}}}, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}}, "df": 1}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}}, "df": 1}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}}, "df": 3}}}}}, "e": {"docs": {}, "df": 0, "x": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}}, "df": 2}}}}, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}}, "df": 13}}}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.environment_variables": {"tf": 1}}, "df": 1}}}}}}}}, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}}, "df": 2}}}}}}}, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}}, "df": 11, "s": {"docs": {"styx.boutiques.model.Tool.groups": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}}, "df": 3}}}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}}, "df": 1}}, "b": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 4}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.author": {"tf": 1}}, "df": 1}}}}}, "f": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyFunc.args": {"tf": 1}}, "df": 1}}}, "d": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 2}}, "s": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}}, "df": 16, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}}, "df": 2}}}}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 10, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.LineBuffer": {"tf": 1}}, "df": 1}}}}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 2}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 2}}}}}}}, "d": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}}, "df": 2}}}, "y": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}, "t": {"docs": {"styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 2, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}}, "df": 6}}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}}, "df": 6}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.core.BtInput": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}}, "df": 18}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "k": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}}, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}}, "df": 1}}}}}}, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}}, "df": 4}}}, "p": {"docs": {"styx.runners.styxdefs.P": {"tf": 1}}, "df": 1, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 10}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.scope.Scope.parent": {"tf": 1}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}}, "df": 1}}}}}}}}}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.primitive": {"tf": 1}}, "df": 1}}}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}}}}}, "y": {"docs": {"styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 7, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}}, "df": 3}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyArg": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}}, "df": 6}}}, "f": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {"styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}}, "df": 9}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyModule": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}}, "df": 7}}}}}}, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 5}}}}}}}}, "fullname": {"root": {"0": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1}, "5": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1}, "docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 12, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1}, "styx.boutiques.model": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}, "styx.boutiques.utils": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.cli": {"tf": 1}, "styx.compiler": {"tf": 1}, "styx.compiler.core": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.core.BtType": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.compiler.defs": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}, "styx.compiler.settings": {"tf": 1}, "styx.compiler.settings.DefsMode": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}, "styx.compiler.utils": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.main": {"tf": 1}, "styx.main.main": {"tf": 1}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}, "styx.pycodegen.core.LineBuffer": {"tf": 1}, "styx.pycodegen.core.INDENT": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}, "styx.pycodegen.core.PyArg": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}, "styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}, "styx.pycodegen.scope": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners": {"tf": 1}, "styx.runners.docker": {"tf": 1}, "styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.metadata": {"tf": 1}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_dir": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 393, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.styxdefs": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 19}}}}}}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}}, "df": 3}}, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}}, "df": 2}}}}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 3}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Type.singularity": {"tf": 1}}, "df": 1}}}}}}}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}}, "df": 2, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 2}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.parent": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.python": {"tf": 1.4142135623730951}}, "df": 7}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 1}}}}}}}}, "e": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}}, "df": 7}}}}}}}, "t": {"docs": {"styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}}, "df": 1, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings": {"tf": 1}, "styx.compiler.settings.DefsMode": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 8}}}}}}}, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 1, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}}, "df": 9}}}}}}}}}}}}}}}}}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}}, "df": 1}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 1}}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool.shell": {"tf": 1}}, "df": 1}}}}, "y": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}}, "df": 2}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}, "i": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 2}}}}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques": {"tf": 1}, "styx.boutiques.model": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}, "styx.boutiques.utils": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1.4142135623730951}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}}, "df": 246}}}}}}}, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}, "d": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}}, "df": 2}}}, "y": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}, "t": {"docs": {"styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 2, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}}, "df": 6}}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}}, "df": 6}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.core.BtInput": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}}, "df": 18}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "k": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}}, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}}, "df": 1}}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 1, "l": {"docs": {"styx.boutiques.model": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1.4142135623730951}}, "df": 242}}}}, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Group.members": {"tf": 1}}, "df": 1}}}}}, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.runners.docker.DockerExecution.metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 10}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}}, "df": 7}}}}}}, "a": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}}, "df": 7}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.main": {"tf": 1}, "styx.main.main": {"tf": 1.4142135623730951}}, "df": 2}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}}, "df": 2}, "2": {"docs": {"styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}}, "df": 2}, "3": {"docs": {"styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}}, "df": 4}, "4": {"docs": {"styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}}, "df": 14}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}}, "df": 6, "s": {"docs": {"styx.boutiques.model.Tool.tests": {"tf": 1}}, "df": 1}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}}, "df": 10}}}}}}, "x": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.PyGen.text": {"tf": 1}}, "df": 1}}}, "o": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 2, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 28}}}, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.Tool.tags": {"tf": 1}}, "df": 1}}}}, "d": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1}, "styx.runners.docker": {"tf": 1}, "styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.metadata": {"tf": 1}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_dir": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}}, "df": 17, "e": {"docs": {}, "df": 0, "x": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.metadata": {"tf": 1}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_dir": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}}, "df": 11}}}}}}}}}, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}}, "df": 4}}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}}, "df": 3}}}}}}}, "i": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}}, "df": 3}, "d": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.docker.DockerExecution.output_dir": {"tf": 1}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}}, "df": 2, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}}, "df": 3}}}}}}}, "s": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}}, "df": 4}}}}}, "k": {"docs": {"styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}}, "df": 1}}, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}, "e": {"docs": {"styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 1}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}}, "df": 8}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 2}}}}}}}}, "f": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}}, "df": 4}}}}, "s": {"docs": {"styx.compiler.defs": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 4, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 4}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "y": {"docs": {"styx.runners.dummy": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}}, "df": 8, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}}, "df": 7}}}}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 9, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}}, "df": 6}, "2": {"docs": {"styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}}, "df": 4}, "3": {"docs": {"styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}}, "df": 4}, "docs": {"styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 2, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"1": {"docs": {"styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}}, "df": 8}, "docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}}, "df": 11}}}}}}}}}}}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}}, "df": 20}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}}, "df": 2, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}}, "df": 5}}}}}}}}}}}}}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 20}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 1, "r": {"docs": {"styx.compiler": {"tf": 1}, "styx.compiler.core": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.core.BtType": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.compiler.defs": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}, "styx.compiler.settings": {"tf": 1}, "styx.compiler.settings.DefsMode": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}, "styx.compiler.utils": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 45, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings.CompilerSettings": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 3}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 11}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.comment": {"tf": 1}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.core.BtType": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.docstring": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}, "styx.pycodegen.core.LineBuffer": {"tf": 1}, "styx.pycodegen.core.INDENT": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}, "styx.pycodegen.core.PyArg": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}}, "df": 66, "s": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}}, "df": 1}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 1}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.collapse": {"tf": 1}}, "df": 1}}}}}}}, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}}, "df": 2}}}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}}, "df": 1}}, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.custom": {"tf": 1}}, "df": 1}}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {"styx.cli": {"tf": 1}}, "df": 1}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 2}}, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.python_camelize": {"tf": 1}}, "df": 1}}}}}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}}, "df": 1}}}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 6}}}, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.pycodegen.core.PyModule.imports": {"tf": 1}}, "df": 1}}}}}}, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 2}, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.INDENT": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}}, "df": 2}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"1": {"docs": {"styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}}, "df": 11, "s": {"1": {"docs": {"styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}}, "df": 28}, "docs": {"styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}}, "df": 31}}}}, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}}, "df": 3}}}}}, "v": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}}, "df": 2}}}}}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 12}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode.INLINE": {"tf": 1}}, "df": 1}}}}}, "d": {"docs": {"styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}}, "df": 8}, "s": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}}, "df": 5}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}}, "df": 1}}}}}}, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}}, "df": 4}}}}}, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.environment_variables": {"tf": 1}}, "df": 1, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}}, "df": 7}}}}}}}}}}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.compiler.core.BtType.is_enum": {"tf": 1}}, "df": 1}}, "s": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}}, "df": 3}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}}, "df": 1}}}}}, "b": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 1}}}}}}, "x": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}}, "df": 7}}}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}}, "df": 2}}}}}}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}}, "df": 2}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.core.expand": {"tf": 1}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 9}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 1}}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 1, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}}, "df": 6}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 2}, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 6}}}}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}}, "df": 1}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}, "y": {"docs": {"styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 1}}}, "r": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 3}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_dir": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 8, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}}, "df": 5}, "docs": {"styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}}, "df": 6, "s": {"1": {"docs": {"styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}}, "df": 17}, "docs": {"styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}}, "df": 17}}}}}}}}}}}, "w": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}}, "df": 3}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 1}}}}}}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}}, "df": 3}}}, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.header": {"tf": 1}}, "df": 1}}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}}, "df": 40}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 15, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}}}}}}}, "s": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}}, "df": 3}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 12}}, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 2}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyModule.funcs": {"tf": 1}}, "df": 1}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.footer": {"tf": 1}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1.4142135623730951}}, "df": 2}}}}}}, "r": {"docs": {"styx.runners.styxdefs.R": {"tf": 1}}, "df": 1, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 1, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type1.rootfs": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Group.one_is_required": {"tf": 1}}, "df": 1}, "s": {"docs": {"styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}}, "df": 4}}}}}}, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 1}}}}}}}, "f": {"docs": {"styx.compiler.core.BtInput.bt_ref": {"tf": 1}}, "df": 1}, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}}, "df": 2}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.SuggestedResources.ram": {"tf": 1}}, "df": 1}}, "u": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}}, "df": 3, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 3, "s": {"docs": {"styx.runners": {"tf": 1}, "styx.runners.docker": {"tf": 1}, "styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.metadata": {"tf": 1}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_dir": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 44}}}}}}}, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}}, "df": 3, "s": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 4}}}, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.utils": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.compiler.utils": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.pycodegen.utils": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 15}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}}, "df": 11}}}, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}}, "df": 1}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}}, "df": 1}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}}, "df": 3}}}}}, "e": {"docs": {}, "df": 0, "x": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1}}, "df": 2}}}}, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}}, "df": 13}}}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.environment_variables": {"tf": 1}}, "df": 1}}}}}}}}, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}}, "df": 2}}}}}}}, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}}, "df": 11, "s": {"docs": {"styx.boutiques.model.Tool.groups": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}}, "df": 3}}}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Group.all_or_none": {"tf": 1}}, "df": 1}}, "b": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 4}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.author": {"tf": 1}}, "df": 1}}}}}, "f": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyFunc.args": {"tf": 1}}, "df": 1}}}, "d": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 2}}, "s": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtInput.list_separator": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}}, "df": 16, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}}, "df": 2}}}}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1}}, "df": 10, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.LineBuffer": {"tf": 1}}, "df": 1}}}}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 2}}}}, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}}, "df": 4}}}, "p": {"docs": {"styx.runners.styxdefs.P": {"tf": 1}}, "df": 1, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 10}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.scope.Scope.parent": {"tf": 1}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}}, "df": 1}}}}}}}}}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.primitive": {"tf": 1}}, "df": 1}}}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}}}}}, "y": {"docs": {"styx.compiler.core.BtInput.py_symbol": {"tf": 1}, "styx.compiler.core.BtInput.py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.compiler.core.BtInput.py_expr": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 7, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}, "styx.pycodegen.core.LineBuffer": {"tf": 1}, "styx.pycodegen.core.INDENT": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}, "styx.pycodegen.core.PyArg": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}, "styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}, "styx.pycodegen.scope": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 54}}}}}}}, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}}, "df": 3}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyArg": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}}, "df": 6}}}, "f": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {"styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}}, "df": 9}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyModule": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}}, "df": 7}}}}}}, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 5}}}}}}}}, "annotation": {"root": {"0": {"docs": {"styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1.4142135623730951}}, "df": 9}, "1": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}}, "df": 33}, "9": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}}, "df": 7}, "docs": {"styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}, "styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.description": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.author": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.shell": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.command_line": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1.4142135623730951}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1.4142135623730951}, "styx.compiler.core.BtInput.py_default": {"tf": 1.4142135623730951}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1.4142135623730951}}, "df": 176, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1}, "styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 12, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 2}}}}}}, "r": {"docs": {"styx.boutiques.model.EnvironmentVariable.value": {"tf": 1}, "styx.boutiques.model.ErrorCode.description": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.pycodegen.core.PyArg.name": {"tf": 1}, "styx.pycodegen.core.PyArg.type": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1}, "styx.pycodegen.core.PyFunc.name": {"tf": 1}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 19, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}}}}}}}}}}, "p": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.schema_version": {"tf": 1}}, "df": 1}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope.Scope.parent": {"tf": 1.4142135623730951}}, "df": 1}}}}, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 1}}}}}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 21}}}}}}}, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.compiler.core.BtType.is_list": {"tf": 1}, "styx.compiler.core.BtType.is_optional": {"tf": 1}, "styx.compiler.core.BtType.is_enum": {"tf": 1}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1}}, "df": 6}}}, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.primitive": {"tf": 1}}, "df": 1}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}, "styx.boutiques.model.ContainerImage.root": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.schema_version": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.output_files": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 21}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}, "a": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 2}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.ContainerImageItem1.type": {"tf": 1}}, "df": 1}, "2": {"docs": {"styx.boutiques.model.Input.type": {"tf": 1}}, "df": 1}, "3": {"docs": {"styx.boutiques.model.Input1.type": {"tf": 1}}, "df": 1}, "4": {"docs": {"styx.boutiques.model.Inputs.type": {"tf": 1}, "styx.boutiques.model.Inputs1.type": {"tf": 1}}, "df": 2}, "docs": {"styx.boutiques.model.ContainerImageItem.type": {"tf": 1}}, "df": 1}}}, "o": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.description": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.author": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.shell": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.command_line": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1.4142135623730951}}, "df": 32}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.tests": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 2}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}}, "df": 7, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}}, "df": 18}}}}}}}}}}}, "y": {"docs": {"styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Test.invocation": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}}, "df": 7}}}, "w": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}}}}}}}, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 2.449489742783178}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 2.23606797749979}, "styx.boutiques.model.Group.id": {"tf": 2.23606797749979}, "styx.boutiques.model.Group.name": {"tf": 2.449489742783178}, "styx.boutiques.model.Group.members": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs.id": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs.name": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.id": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1.name": {"tf": 2.449489742783178}, "styx.boutiques.model.Test.name": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.id": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles.name": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.id": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1.name": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 2.449489742783178}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 2.23606797749979}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 2.449489742783178}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 2.449489742783178}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 2.23606797749979}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.name": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.tool_version": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.description": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.author": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.url": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.doi": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.shell": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.tool_doi": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.command_line": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 2.449489742783178}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}, "styx.compiler.core.BtInput.py_default": {"tf": 1}, "styx.pycodegen.core.PyArg.default": {"tf": 1}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 51, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}}}}}}}}, "u": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}}, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}, "e": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 5, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.description": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.author": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.shell": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.command_line": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1.4142135623730951}}, "df": 32}}}}}, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Group.members": {"tf": 1}}, "df": 1}}}}}}}}}}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.Tool.inputs": {"tf": 1}}, "df": 1}}}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.pycodegen.core.PyFunc.body": {"tf": 1}, "styx.pycodegen.core.PyModule.imports": {"tf": 1}, "styx.pycodegen.core.PyModule.header": {"tf": 1}, "styx.pycodegen.core.PyModule.footer": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1}}, "df": 6}, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}}, "df": 2}}}}, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {"styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}}, "df": 2}}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}}, "df": 2}}}}}}}}, "t": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 5}}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.image": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}, "styx.boutiques.model.Group.id": {"tf": 1}, "styx.boutiques.model.Group.name": {"tf": 1}, "styx.boutiques.model.Group.members": {"tf": 1}, "styx.boutiques.model.Inputs.id": {"tf": 1}, "styx.boutiques.model.Inputs.name": {"tf": 1}, "styx.boutiques.model.Inputs1.id": {"tf": 1}, "styx.boutiques.model.Inputs1.name": {"tf": 1}, "styx.boutiques.model.Test.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.id": {"tf": 1}, "styx.boutiques.model.OutputFiles.name": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.name": {"tf": 1}, "styx.boutiques.model.Tool.tool_version": {"tf": 1}, "styx.boutiques.model.Tool.description": {"tf": 1}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}, "styx.boutiques.model.Tool.command_line": {"tf": 1}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 32}}}}, "h": {"docs": {"styx.runners.docker.DockerExecution.input_files": {"tf": 1}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}}, "df": 3, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {"styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}}, "df": 1}}}}}}, "y": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}, "styx.pycodegen.scope.Scope.parent": {"tf": 1}}, "df": 3}}}}}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyFunc.args": {"tf": 1}}, "df": 1}}}, "f": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {"styx.pycodegen.core.PyModule.funcs": {"tf": 1}}, "df": 1}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1}, "styx.boutiques.model.Group.one_is_required": {"tf": 1}, "styx.boutiques.model.Group.all_or_none": {"tf": 1}, "styx.boutiques.model.Inputs.list": {"tf": 1}, "styx.boutiques.model.Inputs.optional": {"tf": 1}, "styx.boutiques.model.Inputs.integer": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.Inputs1.list": {"tf": 1}, "styx.boutiques.model.Inputs1.optional": {"tf": 1}, "styx.boutiques.model.Inputs1.integer": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles.list": {"tf": 1}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1}}, "df": 22}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.index": {"tf": 1}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1}, "styx.boutiques.model.Tool.author": {"tf": 1}, "styx.boutiques.model.Tool.url": {"tf": 1}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1}, "styx.boutiques.model.Tool.doi": {"tf": 1}, "styx.boutiques.model.Tool.shell": {"tf": 1}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1}}, "df": 11}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}}, "df": 2}}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 3}}}}}}}}}}}}}, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1}, "styx.boutiques.model.Inputs.default_value": {"tf": 1}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1}}, "df": 7}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1}}, "df": 10}, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1}, "styx.boutiques.model.Tool.groups": {"tf": 1}, "styx.boutiques.model.Tool.tests": {"tf": 1}, "styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 6}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}}, "df": 2}, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}}, "df": 1}}}}}}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.EnvironmentVariable.description": {"tf": 1}, "styx.boutiques.model.Group.description": {"tf": 1}, "styx.boutiques.model.Inputs.description": {"tf": 1}, "styx.boutiques.model.Inputs.value_key": {"tf": 1}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.description": {"tf": 1}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles.description": {"tf": 1}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1}}, "df": 20}, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.Input.type": {"tf": 1}, "styx.boutiques.model.Input.list": {"tf": 1}, "styx.boutiques.model.Input1.type": {"tf": 1}, "styx.boutiques.model.OutputFile.list": {"tf": 1}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1}, "styx.boutiques.model.Tool.container_image": {"tf": 1}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1}}, "df": 7}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1}, "styx.boutiques.model.Tool.tags": {"tf": 1}, "styx.boutiques.model.Tool.custom": {"tf": 1}}, "df": 7}}}}}}}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.minimum": {"tf": 1}, "styx.boutiques.model.Inputs.maximum": {"tf": 1}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1}}, "df": 8}}}}}}}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"1": {"docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Tool.output_files": {"tf": 1}}, "df": 1}}}}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"2": {"docs": {"styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 1}, "3": {"docs": {"styx.boutiques.model.ContainerImage.root": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Tool.container_image": {"tf": 1}}, "df": 1}}}}}}}}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1}}, "df": 2}}}}}}}}}}}}}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 2}}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.primitive": {"tf": 1}, "styx.pycodegen.core.PyFunc.args": {"tf": 1}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1}}, "df": 3}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}, "x": {"2": {"7": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1.4142135623730951}}, "df": 8}, "docs": {}, "df": 0}, "docs": {}, "df": 0}, "z": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.members": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.4142135623730951}}, "df": 7, "]": {"docs": {}, "df": 0, "[": {"0": {"docs": {"styx.boutiques.model.EnvironmentVariable.name": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0}}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.value_choices": {"tf": 1}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}}, "df": 4}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFile1.file_template": {"tf": 1}}, "df": 1}}}}}}}}}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Test.invocation": {"tf": 1}}, "df": 1}}}}}}}, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 1}}}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ErrorCode.code": {"tf": 1}, "styx.compiler.core.BtInput.minimum": {"tf": 1}, "styx.compiler.core.BtInput.maximum": {"tf": 1}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1}}, "df": 5, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 5}}}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"1": {"docs": {"styx.boutiques.model.Tool.inputs": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Tool.inputs": {"tf": 1}}, "df": 1}}}}}}, "g": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 5}, "e": {"docs": {"styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1}}, "df": 5}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Tool.groups": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.environment_variables": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.error_codes": {"tf": 1}}, "df": 1}}}}}}}}}, "h": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.online_platform_urls": {"tf": 1}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1}}, "df": 2}}}}}}}}}, "default_value": {"root": {"0": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 9}, "1": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.1622776601683795}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}}, "df": 15}, "2": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.605551275463989}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 16}, "3": {"docs": {"styx.compiler.core.BtPrimitive.Integer": {"tf": 1}}, "df": 1}, "4": {"docs": {"styx.compiler.core.BtPrimitive.File": {"tf": 1}}, "df": 1}, "5": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}}, "df": 2}, "8": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}, "9": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}, "docs": {"styx.boutiques.model.Type.docker": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type.singularity": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.model_config": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 2}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_config": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Test.model_config": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 2}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 6}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.File": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 3.605551275463989}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1.4142135623730951}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1.4142135623730951}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1.4142135623730951}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1.4142135623730951}, "styx.pycodegen.core.INDENT": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.P": {"tf": 1}}, "df": 86, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 25}, "o": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12}}}, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 3}}}}, "l": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 1, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.7416573867739413}}, "df": 13}}}}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.23606797749979}}, "df": 6, "[": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}, "styx.pycodegen.core.LineBuffer": {"tf": 1}}, "df": 3}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}}, "df": 1}}}}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 5}, "k": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}}, "df": 3}, "2": {"docs": {"styx.boutiques.model.Type2.Flag": {"tf": 1}}, "df": 1}, "3": {"docs": {"styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}}, "df": 3}, "4": {"docs": {"styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 6}, "docs": {"styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.605551275463989}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 11, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}}, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 1}}}}}, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2.6457513110645907}}, "df": 13}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 2}, "styx.boutiques.model.Group.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs.model_fields": {"tf": 5.385164807134504}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 5.385164807134504}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.358898943540674}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 16, "i": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}, "y": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "i": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}}, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}}, "o": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.872983346207417}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 14, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 4}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 8, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "k": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 2}}, "g": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Test.model_fields": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3}}, "df": 4}}}}}}}, "x": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "d": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 3, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}}}, "i": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2.8284271247461903}}, "df": 1}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Group.model_fields": {"tf": 3}, "styx.boutiques.model.Inputs.model_fields": {"tf": 5.0990195135927845}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 5.0990195135927845}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.47213595499958}}, "df": 15}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2.23606797749979}}, "df": 1}}}}, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3}, "d": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2}}, "df": 1}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}, "f": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 1, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 4, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 5}}}}}, "s": {"docs": {"styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 1, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 4}}}}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 1}, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}}, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}}}, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 7}}}}}}}, "s": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}}, "df": 2}, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}, "k": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Test.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 4}}}}, "x": {"2": {"7": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type.singularity": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 2}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.Type1.rootfs": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 2}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 5.291502622129181}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 2}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.Group.model_config": {"tf": 2}, "styx.boutiques.model.Group.model_fields": {"tf": 6}, "styx.boutiques.model.Type2.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.model_fields": {"tf": 2}, "styx.boutiques.model.Type3.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_config": {"tf": 2}, "styx.boutiques.model.Inputs.model_fields": {"tf": 11.313708498984761}, "styx.boutiques.model.Inputs1.model_config": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 11.313708498984761}, "styx.boutiques.model.Test.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 2}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 8.366600265340756}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 8.366600265340756}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 5.0990195135927845}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 2}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.Tool.model_config": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 10.392304845413264}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 10.099504938362077}, "styx.pycodegen.core.INDENT": {"tf": 1.4142135623730951}}, "df": 46}, "docs": {}, "df": 0}, "docs": {}, "df": 0}, "g": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1, "t": {"docs": {"styx.boutiques.model.Type.docker": {"tf": 1}, "styx.boutiques.model.Type.singularity": {"tf": 1}, "styx.boutiques.model.Type1.rootfs": {"tf": 1}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.Type3.String": {"tf": 1}, "styx.boutiques.model.Type3.File": {"tf": 1}, "styx.boutiques.model.Type3.Number": {"tf": 1}, "styx.boutiques.model.Type4.String": {"tf": 1}, "styx.boutiques.model.Type4.File": {"tf": 1}, "styx.boutiques.model.Type4.Flag": {"tf": 1}, "styx.boutiques.model.Type4.Number": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 26}, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "b": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3}}}}}, "z": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}, "b": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Type.singularity": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}}}}, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 14, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Type3.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.String": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.compiler.core.BtPrimitive.String": {"tf": 1}}, "df": 8, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.4641016151377544}}, "df": 13}}}}}}}}}}}, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}, "p": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 2}}}}, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 1}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1}}}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2.23606797749979}}, "df": 1, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}}}}, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}, "u": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 5}}, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}}}}}}}}}, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}, "c": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}, "e": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 4}}}}}}}, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 5, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}, "f": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 1}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1}}}}}}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}}, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "c": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "y": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 1}}}}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1}}}}}, "y": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1, "x": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}}, "df": 12}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 2}}}}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.23606797749979}}, "df": 8, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 5}}}}}}, "c": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}}, "df": 3}}}}}}}, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 3.605551275463989}}, "df": 4, "[": {"docs": {}, "df": 0, "p": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 2}}}, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}}, "df": 2}}}}}, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 2}}}}}}}}}}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1, "d": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1}}}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 8, "b": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1}, "styx.boutiques.model.Group.model_config": {"tf": 1}, "styx.boutiques.model.Inputs.model_config": {"tf": 1}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1}, "styx.boutiques.model.Tool.model_config": {"tf": 1}}, "df": 12}}}, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.898979485566356}}, "df": 20}}}}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type3.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.File": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.8284271247461903}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 3.1622776601683795}}, "df": 10, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}}, "df": 1}}}}}}}}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 3}}}}, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 2}}}, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 1}}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.58257569495584}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.58257569495584}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.242640687119285}}, "df": 20}}}, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Type2.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Flag": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.449489742783178}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}}, "df": 9, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 5}}}, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 6}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}, "a": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 2}, "styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 9, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 8, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.898979485566356}}, "df": 20}}}}}}}}, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 10, "/": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}}}, "y": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 5}}, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 6}}}}}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2}, "styx.boutiques.model.Group.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs.model_fields": {"tf": 5.477225575051661}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 5.477225575051661}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 4}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 4}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool.model_fields": {"tf": 5.0990195135927845}}, "df": 14}}}, "p": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}}}}}}}}}}, "l": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 2}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}}}}}}}, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 3}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 3}}}}, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2}}, "df": 3}}}}}}}}}}, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 3}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1}}}}}, "t": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 6}, "b": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 5}}}}}}}, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 5, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "f": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 1}}}}}, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.449489742783178}, "styx.runners.styxdefs.R": {"tf": 1}}, "df": 2, "e": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 3}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 5}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 5}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.898979485566356}}, "df": 20}, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}}, "df": 2}}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2}}, "df": 1}}}}}}}, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "s": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"1": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}, "docs": {}, "df": 0}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "l": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "p": {"docs": {}, "df": 0, "o": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type1.rootfs": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 2, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 6}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.449489742783178}}, "df": 1}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}}, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.settings.DefsMode.IMPORT": {"tf": 1}}, "df": 1}}}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 10}, "n": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 7, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}}}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.242640687119285}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.242640687119285}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 7, "s": {"1": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.123105625617661}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.123105625617661}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 4}}}}, "v": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}}}, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}}}, "t": {"docs": {"styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}, "f": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.23606797749979}}, "df": 1}}}, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}}, "df": 3}}}}}, "c": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode.INLINE": {"tf": 1}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1}}, "df": 2}}}}}, "f": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 8}, "o": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}, "d": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}, "s": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.23606797749979}}, "df": 3}}, "t": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1, "e": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "f": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 11, "s": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 6}}}}, "o": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Group.model_fields": {"tf": 3.605551275463989}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.Test.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.898979485566356}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1}}, "df": 14, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.Input.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.58257569495584}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.58257569495584}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.3166247903554}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 4.242640687119285}, "styx.boutiques.model.Tool.model_fields": {"tf": 4.242640687119285}}, "df": 18}}}}}}, "t": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 7}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type3.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4.Number": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}}, "df": 6}}}}}, "i": {"docs": {}, "df": 0, "i": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}, "o": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2, "f": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.605551275463989}}, "df": 12}, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 7}, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 6}}}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}, "n": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1}}, "df": 7}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}}, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 2}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.1622776601683795}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 4, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"1": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}, "docs": {}, "df": 0}}}}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"1": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0}}}}}}}}}}, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}, "b": {"docs": {}, "df": 0, "j": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 3, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 3}}}}}}}, "w": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}}, "df": 4}}}}, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}}, "df": 2}}, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12}}}}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 2}}}, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}}}}, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}}, "df": 1}}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 4}, "d": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1}}, "df": 1, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}}, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 2, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 2}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 6}, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 6}}}}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}, "m": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.6457513110645907}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 6, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}}}}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 1}}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}}}}}}}}, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}}, "df": 2}}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Test.model_fields": {"tf": 1}}, "df": 3}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 1}}, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 1}}}, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}, "p": {"docs": {}, "df": 0, "u": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}, "b": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "n": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.7416573867739413}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 2.23606797749979}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 8, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "t": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 4}}}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}}, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2}}, "df": 3}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ListModel.bool_False": {"tf": 1}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "y": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 6}, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3}}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtPrimitive.String": {"tf": 1}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1}, "styx.compiler.core.BtPrimitive.File": {"tf": 1}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1}}, "df": 5}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.1622776601683795}}, "df": 13}}}}}}, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 3}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.1622776601683795}}, "df": 13, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}}, "df": 2}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2.449489742783178}}, "df": 4}}}}, "g": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3}}}}, "a": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}}, "df": 2}}}}}, "y": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 6}}, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 4}}, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}, "l": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}, "n": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}, "u": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12}}}}, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}}, "df": 7}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 2.6457513110645907}}, "df": 6}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}}}}}}}}}}}, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}}, "df": 7}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 7}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}}}}}}}}}}}}}}}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}, "r": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.Input.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2}}, "df": 6}}, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"2": {"docs": {"styx.boutiques.model.Input.model_fields": {"tf": 1}}, "df": 1}, "3": {"docs": {"styx.boutiques.model.Input1.model_fields": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 3}}}}}}}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 2}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2}}, "df": 2}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 6}}}}}}}}, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 3, "s": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 6}, "d": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}}, "df": 7}}}, "r": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 3, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}}, "p": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.P": {"tf": 1}}, "df": 2, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}}, "df": 12}}}}, "h": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 3.4641016151377544}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 6, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"1": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}, "docs": {}, "df": 0}}, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}}, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 3.872983346207417}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 3.605551275463989}}, "df": 14}}}}}, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "o": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}}, "df": 1}}}}, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1}}, "df": 1}}}}}}}}}}, "d": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "p": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}}}, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2}}}}}}}}, "y": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 2}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}}, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}}}, "s": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1}}, "df": 1}}}}}}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.4142135623730951}}, "df": 5}}, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}}, "df": 2}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}}, "df": 5}}}}, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.defs.STYX_DEFINITIONS": {"tf": 2.23606797749979}}, "df": 1, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 1}}}}}}, "v": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}}, "df": 2, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1}}, "df": 7, "s": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 7, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 3}}}}}, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Tool.model_fields": {"tf": 2.449489742783178}}, "df": 1}}}}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 2.8284271247461903}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 4.898979485566356}, "styx.boutiques.model.Tool.model_fields": {"tf": 2}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 7.615773105863909}}, "df": 8}}}}, "z": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.4142135623730951}}, "df": 6, "]": {"docs": {}, "df": 0, "[": {"0": {"docs": {"styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0}}}, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}}, "df": 5, "s": {"docs": {"styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.4142135623730951}}, "df": 3}}}}}}, "signature": {"root": {"0": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 1}, "1": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 3}, "3": {"9": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.enbrace": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.as_py_literal": {"tf": 2}}, "df": 3}, "docs": {}, "df": 0}, "docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 5.291502622129181}, "styx.boutiques.utils.boutiques_split_command": {"tf": 4.58257569495584}, "styx.compiler.core.BtType.__init__": {"tf": 7.211102550927978}, "styx.compiler.core.BtInput.__init__": {"tf": 6.782329983125268}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 6.708203932499369}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 3.4641016151377544}, "styx.compiler.core.compile_descriptor": {"tf": 7.0710678118654755}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 6.6332495807108}, "styx.compiler.utils.optional_float_to_int": {"tf": 5.0990195135927845}, "styx.main.main": {"tf": 3}, "styx.pycodegen.core.indent": {"tf": 6.324555320336759}, "styx.pycodegen.core.comment": {"tf": 5.0990195135927845}, "styx.pycodegen.core.collapse": {"tf": 4.58257569495584}, "styx.pycodegen.core.expand": {"tf": 4.58257569495584}, "styx.pycodegen.core.blank_before": {"tf": 6.324555320336759}, "styx.pycodegen.core.blank_after": {"tf": 6.324555320336759}, "styx.pycodegen.core.PyGen.generate": {"tf": 4.123105625617661}, "styx.pycodegen.core.PyGen.text": {"tf": 3.4641016151377544}, "styx.pycodegen.core.PyArg.__init__": {"tf": 6.4031242374328485}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 9.539392014169456}, "styx.pycodegen.core.PyFunc.generate": {"tf": 4.123105625617661}, "styx.pycodegen.core.PyModule.__init__": {"tf": 10.954451150103322}, "styx.pycodegen.core.PyModule.generate": {"tf": 4.123105625617661}, "styx.pycodegen.format.format_code": {"tf": 4.58257569495584}, "styx.pycodegen.scope.Scope.__init__": {"tf": 5.916079783099616}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 4.47213595499958}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 4.47213595499958}, "styx.pycodegen.scope.Scope.python": {"tf": 4.898979485566356}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 4}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 4}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 4}, "styx.pycodegen.utils.python_camelize": {"tf": 4}, "styx.pycodegen.utils.python_snakify": {"tf": 4}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 4}, "styx.pycodegen.utils.enquote": {"tf": 5.656854249492381}, "styx.pycodegen.utils.enbrace": {"tf": 5.744562646538029}, "styx.pycodegen.utils.as_py_literal": {"tf": 9.746794344808963}, "styx.runners.docker.DockerExecution.__init__": {"tf": 6}, "styx.runners.docker.DockerExecution.input_file": {"tf": 4.898979485566356}, "styx.runners.docker.DockerExecution.output_file": {"tf": 6.164414002968976}, "styx.runners.docker.DockerExecution.run": {"tf": 5}, "styx.runners.docker.DockerRunner.__init__": {"tf": 6.928203230275509}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 8}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 7.483314773547883}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 4.47213595499958}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 5.830951894845301}, "styx.runners.dummy.DummyRunner.run": {"tf": 5}, "styx.runners.styxdefs.Execution.__init__": {"tf": 4}, "styx.runners.styxdefs.Execution.input_file": {"tf": 4.795831523312719}, "styx.runners.styxdefs.Execution.run": {"tf": 5}, "styx.runners.styxdefs.Execution.output_file": {"tf": 6}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 10.099504938362077}, "styx.runners.styxdefs.Runner.__init__": {"tf": 4}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 7.810249675906654}}, "df": 54, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}}, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1}}, "r": {"docs": {"styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 2}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyFunc.__init__": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 1}}}}}}}}, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 1, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.PyArg.__init__": {"tf": 1}}, "df": 1}}}}}}, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}}, "df": 2}}}}}}}}}, "s": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 2, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1.4142135623730951}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1.4142135623730951}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1.4142135623730951}}, "df": 15, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1.4142135623730951}}, "df": 5}}}}}}, "r": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1.4142135623730951}, "styx.pycodegen.core.comment": {"tf": 1.4142135623730951}, "styx.pycodegen.core.collapse": {"tf": 1.4142135623730951}, "styx.pycodegen.core.expand": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_before": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_after": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 2}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 2.23606797749979}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_camelize": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_snakify": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.enquote": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.enbrace": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.as_py_literal": {"tf": 2}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 2.449489742783178}}, "df": 40, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 5}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtInput.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.python": {"tf": 1.4142135623730951}}, "df": 3}}}}, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "f": {"docs": {"styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyGen.text": {"tf": 1}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 19}}, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1.4142135623730951}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 2}}}}}}}, "y": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 2}}}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 3}}}}}}}, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.as_py_literal": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 5}}, "d": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.core.PyFunc.__init__": {"tf": 1.4142135623730951}}, "df": 1}}}, "t": {"docs": {"styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 2, "p": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}}, "df": 1}}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 1}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}}}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 1}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 1, "l": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 3}}}}, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.runners.docker.DockerExecution.__init__": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1.4142135623730951}}, "df": 5}}}}}}}}, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 2}}}, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 6}}}, "e": {"docs": {}, "df": 0, "x": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.expand": {"tf": 1}}, "df": 1}}}, "a": {"docs": {}, "df": 0, "g": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 1}}}}, "p": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 4, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 4}}, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.format.format_code": {"tf": 1}}, "df": 1}}, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 2}}, "df": 1}}}}}}}}, "l": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 2}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}}, "df": 3}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 1}}}}}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1.4142135623730951}, "styx.pycodegen.core.comment": {"tf": 1.4142135623730951}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_after": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyGen.generate": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 2}, "styx.pycodegen.core.PyModule.generate": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}}, "df": 18}}, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 5}}}}, "t": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 2}}, "df": 2}, "e": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}}, "df": 1}}}}, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 3}}}}}, "p": {"docs": {"styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 2, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}}, "df": 1}}}}}}}}, "y": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.compiler.core.BtInput.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 5}}}}}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyFunc.__init__": {"tf": 1}}, "df": 1}}}, "f": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 1}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.scope.Scope.__init__": {"tf": 1}}, "df": 1}}}}, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1.4142135623730951}}, "df": 5, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {"styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1.4142135623730951}}, "df": 5}}}}}}}, "i": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1.7320508075688772}}, "df": 1}, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.core.BtInput.__init__": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.compiler.core.BtInput.__init__": {"tf": 1}}, "df": 1}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}}, "df": 1}}}}, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1.4142135623730951}}, "df": 5}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "x": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 1}}}}}, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 2}}, "df": 1}}}}, "d": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 5}}}}}, "s": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}}, "b": {"docs": {}, "df": 0, "j": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 2}}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.compiler.core.BtType.__init__": {"tf": 1}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 2}}}, "x": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 4}}}}}}}}}, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}}, "df": 1}}}}}}, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1.4142135623730951}, "styx.main.main": {"tf": 1}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1.4142135623730951}, "styx.pycodegen.format.format_code": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 2.8284271247461903}}, "df": 12}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyArg.__init__": {"tf": 1}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 4}}}}, "g": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.settings.CompilerSettings.__init__": {"tf": 1}, "styx.pycodegen.core.PyModule.__init__": {"tf": 2}}, "df": 2}}, "f": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1.4142135623730951}}, "df": 2}}}}, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 2}}, "df": 1}}}}}, "l": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 3}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 1}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 1}}}}, "r": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 6}}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyFunc.__init__": {"tf": 1}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 3}}}}, "r": {"docs": {"styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 2, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyFunc.__init__": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.docker.DockerExecution.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1.4142135623730951}}, "df": 5}}}}}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyModule.__init__": {"tf": 1}}, "df": 1}}}}}, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}}, "df": 3}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 2, "e": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 2}}}}}, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1.4142135623730951}}, "df": 1}}}}}, "k": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.styxdefs.Execution.__init__": {"tf": 1}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1}}, "df": 2}}}}}}}}, "bases": {"root": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}, "styx.compiler.settings.DefsMode": {"tf": 1.4142135623730951}}, "df": 10}}}, "x": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1}}, "df": 1}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}}, "df": 1}}}}}}}}}}}}}, "p": {"docs": {"styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2, "y": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 15}}}}}}, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.PyFunc": {"tf": 1}, "styx.pycodegen.core.PyModule": {"tf": 1}}, "df": 2}}}}, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerRunner": {"tf": 1.4142135623730951}}, "df": 2, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}}, "df": 2}}}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2}}}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 15}}}}, "b": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 15}}}}}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}}, "df": 2}, "docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"1": {"docs": {"styx.boutiques.model.ContainerImage3": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.ContainerImage2": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 4}}}}}}, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "[": {"docs": {}, "df": 0, "~": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImage": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}}}}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"1": {"docs": {"styx.boutiques.model.Inputs1": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Inputs": {"tf": 1}}, "df": 1}}}}}, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"1": {"docs": {"styx.boutiques.model.OutputFiles1": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.OutputFiles": {"tf": 1}}, "df": 1}}}}}}}}}}, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "c": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1.4142135623730951}}, "df": 1}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1.4142135623730951}}, "df": 3, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1.4142135623730951}}, "df": 3}}}}}}, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1.4142135623730951}}, "df": 1}}}, "r": {"docs": {"styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 2, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1.4142135623730951}}, "df": 3}, "[": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}}, "df": 1}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.dummy.DummyRunner": {"tf": 1}}, "df": 1}}}}}}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1}}}}}}}}}}}}, "doc": {"root": {"1": {"1": {"docs": {"styx": {"tf": 1}}, "df": 1}, "docs": {"styx.boutiques.model.Type": {"tf": 2.449489742783178}, "styx.boutiques.model.Type1": {"tf": 2.449489742783178}, "styx.boutiques.model.SchemaVersion": {"tf": 2.449489742783178}, "styx.boutiques.model.Type2": {"tf": 2.449489742783178}, "styx.boutiques.model.ListModel": {"tf": 2.449489742783178}, "styx.boutiques.model.Type3": {"tf": 2.449489742783178}, "styx.boutiques.model.Type4": {"tf": 2.449489742783178}, "styx.boutiques.model.FileTemplate": {"tf": 2.449489742783178}, "styx.compiler.core.BtPrimitive": {"tf": 2.449489742783178}}, "df": 9}, "2": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}, "3": {"9": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}, "docs": {"styx": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SchemaVersion": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ListModel": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4": {"tf": 1.7320508075688772}, "styx.boutiques.model.FileTemplate": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive": {"tf": 1.7320508075688772}}, "df": 10}, "6": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "/": {"docs": {}, "df": 0, "#": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImage": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}}}}}}}}}}}, "7": {"7": {"docs": {"styx": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0}, "docs": {"styx": {"tf": 11.445523142259598}, "styx.boutiques": {"tf": 3.1622776601683795}, "styx.boutiques.model": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type": {"tf": 14.798648586948742}, "styx.boutiques.model.Type.docker": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type.singularity": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem": {"tf": 11.874342087037917}, "styx.boutiques.model.ContainerImageItem.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.image": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.entrypoint": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.index": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.container_opts": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.working_directory": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.container_hash": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type1": {"tf": 14.798648586948742}, "styx.boutiques.model.Type1.rootfs": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 11.874342087037917}, "styx.boutiques.model.ContainerImageItem1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.url": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.working_directory": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.container_hash": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 11.874342087037917}, "styx.boutiques.model.ContainerImage1.working_directory": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1.container_hash": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 11.874342087037917}, "styx.boutiques.model.ContainerImage2.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 11.874342087037917}, "styx.boutiques.model.ContainerImage3.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage": {"tf": 6.4031242374328485}, "styx.boutiques.model.ContainerImage.root": {"tf": 1.7320508075688772}, "styx.boutiques.model.SchemaVersion": {"tf": 14.798648586948742}, "styx.boutiques.model.SchemaVersion.field_0_5": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 11.874342087037917}, "styx.boutiques.model.EnvironmentVariable.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.value": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 11.874342087037917}, "styx.boutiques.model.Group.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.id": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.members": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.mutually_exclusive": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.one_is_required": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.all_or_none": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type2": {"tf": 14.798648586948742}, "styx.boutiques.model.Type2.Flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.ListModel": {"tf": 14.798648586948742}, "styx.boutiques.model.ListModel.bool_False": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 11.874342087037917}, "styx.boutiques.model.Input.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3": {"tf": 14.798648586948742}, "styx.boutiques.model.Type3.String": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3.File": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3.Number": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 11.874342087037917}, "styx.boutiques.model.Input1.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4": {"tf": 14.798648586948742}, "styx.boutiques.model.Type4.String": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4.File": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4.Flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4.Number": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 11.874342087037917}, "styx.boutiques.model.Inputs.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.id": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.value_key": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.list_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.optional": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.command_line_flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.requires_inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.disables_inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.command_line_flag_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.default_value": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.value_choices": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.value_requires": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.value_disables": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.integer": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.minimum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.maximum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.exclusive_minimum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.exclusive_maximum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.min_list_entries": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.max_list_entries": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.uses_absolute_path": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 11.874342087037917}, "styx.boutiques.model.Inputs1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.id": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.value_key": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.list_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.optional": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.command_line_flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.requires_inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.disables_inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.command_line_flag_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.default_value": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.value_choices": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.value_requires": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.value_disables": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.integer": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.minimum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.maximum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.exclusive_minimum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.exclusive_maximum": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.min_list_entries": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.max_list_entries": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.uses_absolute_path": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 11.874342087037917}, "styx.boutiques.model.Test.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test.invocation": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 11.874342087037917}, "styx.boutiques.model.OutputFile.file_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.FileTemplate": {"tf": 14.798648586948742}, "styx.boutiques.model.FileTemplate.bool_False": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 11.874342087037917}, "styx.boutiques.model.OutputFile1.file_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 11.874342087037917}, "styx.boutiques.model.ConditionalPathTemplateItem.propertyNames": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 11.874342087037917}, "styx.boutiques.model.OutputFiles.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.id": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.value_key": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.path_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.conditional_path_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.path_template_stripped_extensions": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.optional": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.command_line_flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.command_line_flag_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.uses_absolute_path": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.file_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 11.874342087037917}, "styx.boutiques.model.OutputFiles1.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.id": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.value_key": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.path_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.conditional_path_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.path_template_stripped_extensions": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.list": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.optional": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.command_line_flag": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.command_line_flag_separator": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.uses_absolute_path": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.file_template": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 11.874342087037917}, "styx.boutiques.model.SuggestedResources.cpu_cores": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.ram": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.disk_space": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.nodes": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.walltime_estimate": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 11.874342087037917}, "styx.boutiques.model.ErrorCode.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode.code": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 11.874342087037917}, "styx.boutiques.model.Tool.model_config": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.name": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.tool_version": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.description": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.deprecated_by_doi": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.author": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.url": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.descriptor_url": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.doi": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.shell": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.tool_doi": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.command_line": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.container_image": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.schema_version": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.environment_variables": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.groups": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.tests": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.online_platform_urls": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.output_files": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.invocation_schema": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.suggested_resources": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.tags": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.error_codes": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.custom": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_fields": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool.model_computed_fields": {"tf": 1.7320508075688772}, "styx.boutiques.utils": {"tf": 1.7320508075688772}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 4.898979485566356}, "styx.boutiques.utils.boutiques_split_command": {"tf": 4.898979485566356}, "styx.cli": {"tf": 1.7320508075688772}, "styx.compiler": {"tf": 1.7320508075688772}, "styx.compiler.core": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive": {"tf": 14.798648586948742}, "styx.compiler.core.BtPrimitive.String": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive.Number": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive.Integer": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive.File": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive.Flag": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType.__init__": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType.primitive": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType.is_list": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType.is_optional": {"tf": 1.7320508075688772}, "styx.compiler.core.BtType.is_enum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.__init__": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.bt_ref": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.py_symbol": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.docstring": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.command_line_flag": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.list_separator": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.minimum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.minimum_exclusive": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.maximum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.maximum_exclusive": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.list_minimum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.list_maximum": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.py_type": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.py_default": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.py_expr": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.bt_type_to_py_type": {"tf": 1.7320508075688772}, "styx.compiler.core.BtInput.py_expr_is_set": {"tf": 1.7320508075688772}, "styx.compiler.core.compile_descriptor": {"tf": 1.7320508075688772}, "styx.compiler.defs": {"tf": 1.7320508075688772}, "styx.compiler.defs.STYX_DEFINITIONS": {"tf": 1.7320508075688772}, "styx.compiler.settings": {"tf": 1.7320508075688772}, "styx.compiler.settings.DefsMode": {"tf": 1.7320508075688772}, "styx.compiler.settings.DefsMode.INLINE": {"tf": 1.7320508075688772}, "styx.compiler.settings.DefsMode.IMPORT": {"tf": 1.7320508075688772}, "styx.compiler.settings.DefsMode.DEFS_ONLY": {"tf": 1.7320508075688772}, "styx.compiler.settings.CompilerSettings": {"tf": 1.7320508075688772}, "styx.compiler.settings.CompilerSettings.__init__": {"tf": 1.7320508075688772}, "styx.compiler.settings.CompilerSettings.defs_mode": {"tf": 1.7320508075688772}, "styx.compiler.utils": {"tf": 1.7320508075688772}, "styx.compiler.utils.optional_float_to_int": {"tf": 1.7320508075688772}, "styx.main": {"tf": 1.7320508075688772}, "styx.main.main": {"tf": 1.7320508075688772}, "styx.pycodegen": {"tf": 1.7320508075688772}, "styx.pycodegen.core": {"tf": 1.7320508075688772}, "styx.pycodegen.core.LineBuffer": {"tf": 1.7320508075688772}, "styx.pycodegen.core.INDENT": {"tf": 1.7320508075688772}, "styx.pycodegen.core.indent": {"tf": 1.7320508075688772}, "styx.pycodegen.core.comment": {"tf": 1.7320508075688772}, "styx.pycodegen.core.collapse": {"tf": 1.7320508075688772}, "styx.pycodegen.core.expand": {"tf": 1.7320508075688772}, "styx.pycodegen.core.blank_before": {"tf": 1.7320508075688772}, "styx.pycodegen.core.blank_after": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyGen": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyGen.generate": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyGen.text": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg.name": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg.type": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg.default": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyArg.docstring": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.name": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.args": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.docstring_body": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.body": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.return_descr": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.return_type": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyFunc.generate": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.imports": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.header": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.funcs": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.footer": {"tf": 1.7320508075688772}, "styx.pycodegen.core.PyModule.generate": {"tf": 1.7320508075688772}, "styx.pycodegen.format": {"tf": 1.7320508075688772}, "styx.pycodegen.format.format_code": {"tf": 1.7320508075688772}, "styx.pycodegen.scope": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.parent": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.python": {"tf": 1.7320508075688772}, "styx.pycodegen.utils": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 4.898979485566356}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 5.0990195135927845}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 4.795831523312719}, "styx.pycodegen.utils.python_camelize": {"tf": 4.795831523312719}, "styx.pycodegen.utils.python_snakify": {"tf": 4.795831523312719}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 4.795831523312719}, "styx.pycodegen.utils.enquote": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.enbrace": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.as_py_literal": {"tf": 1.7320508075688772}, "styx.runners": {"tf": 1.7320508075688772}, "styx.runners.docker": {"tf": 1.7320508075688772}, "styx.runners.docker.DockerExecution": {"tf": 3}, "styx.runners.docker.DockerExecution.__init__": {"tf": 1.7320508075688772}, "styx.runners.docker.DockerExecution.metadata": {"tf": 1.7320508075688772}, "styx.runners.docker.DockerExecution.input_files": {"tf": 1.7320508075688772}, "styx.runners.docker.DockerExecution.input_file_next_id": {"tf": 1.7320508075688772}, "styx.runners.docker.DockerExecution.output_files": {"tf": 1.7320508075688772}, "styx.runners.docker.DockerExecution.output_file_next_id": {"tf": 1.7320508075688772}, "styx.runners.docker.DockerExecution.output_dir": {"tf": 1.7320508075688772}, "styx.runners.docker.DockerExecution.input_file": {"tf": 3.4641016151377544}, "styx.runners.docker.DockerExecution.output_file": {"tf": 3}, "styx.runners.docker.DockerExecution.run": {"tf": 3.4641016151377544}, "styx.runners.docker.DockerRunner": {"tf": 3.7416573867739413}, "styx.runners.docker.DockerRunner.__init__": {"tf": 4}, "styx.runners.docker.DockerRunner.execution_output_dir": {"tf": 1.7320508075688772}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 3}, "styx.runners.dummy": {"tf": 1.7320508075688772}, "styx.runners.dummy.DummyRunner": {"tf": 3.7416573867739413}, "styx.runners.dummy.DummyRunner.last_cargs": {"tf": 1.7320508075688772}, "styx.runners.dummy.DummyRunner.last_metadata": {"tf": 1.7320508075688772}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 3}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 3.4641016151377544}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 3}, "styx.runners.dummy.DummyRunner.run": {"tf": 3.4641016151377544}, "styx.runners.styxdefs": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.P": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.R": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Execution": {"tf": 3}, "styx.runners.styxdefs.Execution.__init__": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Execution.input_file": {"tf": 3.4641016151377544}, "styx.runners.styxdefs.Execution.run": {"tf": 3.4641016151377544}, "styx.runners.styxdefs.Execution.output_file": {"tf": 3}, "styx.runners.styxdefs.Metadata": {"tf": 2.449489742783178}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata.id": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata.name": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Runner": {"tf": 3.7416573867739413}, "styx.runners.styxdefs.Runner.__init__": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 3}}, "df": 393, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "x": {"docs": {"styx": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.cli": {"tf": 1}}, "df": 3}}, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx": {"tf": 1.4142135623730951}, "styx.compiler.defs": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1.4142135623730951}}, "df": 3}}, "u": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 3}}}}}, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 8}}}, "r": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}}, "df": 2, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 2}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 2}, "styx.pycodegen.utils.python_camelize": {"tf": 2}, "styx.pycodegen.utils.python_snakify": {"tf": 2}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 2}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 11}}}, "u": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1}}}}}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}}, "df": 2}}}}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.collapse": {"tf": 1}}, "df": 1}}}}, "g": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}}}, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 21, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}}}}}, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 5}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 1}}}}}}}}, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}}}}}}}, "e": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "z": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}}, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 21, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings": {"tf": 1}}, "df": 1}}}}}}}, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 1}}}}, "y": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}}, "df": 3, "s": {"docs": {"styx.pycodegen.scope.Scope": {"tf": 1}}, "df": 1}}}}}}, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 3}}}}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 3, "r": {"docs": {"styx.compiler": {"tf": 1}, "styx.compiler.settings": {"tf": 1}, "styx.compiler.utils": {"tf": 1}}, "df": 3}, "d": {"docs": {"styx.compiler.defs": {"tf": 1}}, "df": 1}}}}, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.7320508075688772}, "styx.cli": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}}, "df": 7, "s": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 5}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.comment": {"tf": 1}}, "df": 1}}}}}, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}}}}, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}}, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 2}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 4}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 1}}}}}}}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 7, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 6}}, "s": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 5}}}}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.compiler.defs": {"tf": 1}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}, "styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 6, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1, "/": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}}}}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}}}, "a": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.collapse": {"tf": 1}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}}, "df": 1}}}}}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type": {"tf": 3.4641016151377544}, "styx.boutiques.model.Type1": {"tf": 3.4641016151377544}, "styx.boutiques.model.SchemaVersion": {"tf": 3.4641016151377544}, "styx.boutiques.model.Type2": {"tf": 3.4641016151377544}, "styx.boutiques.model.ListModel": {"tf": 3.4641016151377544}, "styx.boutiques.model.Type3": {"tf": 3.4641016151377544}, "styx.boutiques.model.Type4": {"tf": 3.4641016151377544}, "styx.boutiques.model.FileTemplate": {"tf": 3.4641016151377544}, "styx.compiler.core.BtPrimitive": {"tf": 3.4641016151377544}}, "df": 9}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}}, "df": 20}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 22}}}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 15, "d": {"docs": {"styx.boutiques": {"tf": 1}, "styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}}, "df": 3}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 30, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SchemaVersion": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ListModel": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4": {"tf": 1.7320508075688772}, "styx.boutiques.model.FileTemplate": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive": {"tf": 1.7320508075688772}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 10}, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}}, "df": 5}}, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}}, "df": 2}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 13}}, "s": {"docs": {"styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 9}}}}}, "p": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques": {"tf": 1.4142135623730951}}, "df": 1, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1.4142135623730951}, "styx.compiler": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 9}}}}, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 4.358898943540674}, "styx.boutiques.model.ContainerImageItem1": {"tf": 4.358898943540674}, "styx.boutiques.model.ContainerImage1": {"tf": 4.358898943540674}, "styx.boutiques.model.ContainerImage2": {"tf": 4.358898943540674}, "styx.boutiques.model.ContainerImage3": {"tf": 4.358898943540674}, "styx.boutiques.model.ContainerImage": {"tf": 2.23606797749979}, "styx.boutiques.model.EnvironmentVariable": {"tf": 4.358898943540674}, "styx.boutiques.model.Group": {"tf": 4.358898943540674}, "styx.boutiques.model.Input": {"tf": 4.358898943540674}, "styx.boutiques.model.Input1": {"tf": 4.358898943540674}, "styx.boutiques.model.Inputs": {"tf": 4.358898943540674}, "styx.boutiques.model.Inputs1": {"tf": 4.358898943540674}, "styx.boutiques.model.Test": {"tf": 4.358898943540674}, "styx.boutiques.model.OutputFile": {"tf": 4.358898943540674}, "styx.boutiques.model.OutputFile1": {"tf": 4.358898943540674}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 4.358898943540674}, "styx.boutiques.model.OutputFiles": {"tf": 4.358898943540674}, "styx.boutiques.model.OutputFiles1": {"tf": 4.358898943540674}, "styx.boutiques.model.SuggestedResources": {"tf": 4.358898943540674}, "styx.boutiques.model.ErrorCode": {"tf": 4.358898943540674}, "styx.boutiques.model.Tool": {"tf": 4.358898943540674}}, "df": 22}}}}}}}, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}}, "df": 21}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 1}}}}}}}}, "o": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 1}}}}}}}, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "t": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 2}}, "o": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 3}}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 6}}}}}}}}}}}, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.cli": {"tf": 1}}, "df": 2, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 6}}}}}}, "s": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 10, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}, "[": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}}, "df": 1}}}}}}, "b": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 1}}}}}, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 7, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 3}}}}}}}, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 1}}}}}}, "o": {"docs": {}, "df": 0, "k": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}}}, "t": {"docs": {"styx.boutiques.model.Type": {"tf": 2.449489742783178}, "styx.boutiques.model.Type1": {"tf": 2.449489742783178}, "styx.boutiques.model.SchemaVersion": {"tf": 2.449489742783178}, "styx.boutiques.model.Type2": {"tf": 2.449489742783178}, "styx.boutiques.model.ListModel": {"tf": 2.449489742783178}, "styx.boutiques.model.Type3": {"tf": 2.449489742783178}, "styx.boutiques.model.Type4": {"tf": 2.449489742783178}, "styx.boutiques.model.FileTemplate": {"tf": 2.449489742783178}, "styx.compiler.core.BtPrimitive": {"tf": 2.449489742783178}}, "df": 9}, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 2}}}, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}}}, "t": {"docs": {}, "df": 0, "o": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}, "styx.compiler": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.compiler.utils.optional_float_to_int": {"tf": 1}, "styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_camelize": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_snakify": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 49, "o": {"docs": {}, "df": 0, "l": {"docs": {"styx": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 6}}}, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}, "g": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}, "y": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1.4142135623730951}, "styx.compiler.defs": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}}, "df": 7, "s": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}}, "df": 2}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx": {"tf": 1}}, "df": 1, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 4.898979485566356}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 4.898979485566356}, "styx.boutiques.model.ContainerImage1": {"tf": 4.898979485566356}, "styx.boutiques.model.ContainerImage2": {"tf": 4.898979485566356}, "styx.boutiques.model.ContainerImage3": {"tf": 4.898979485566356}, "styx.boutiques.model.ContainerImage": {"tf": 2.6457513110645907}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 4.898979485566356}, "styx.boutiques.model.Group": {"tf": 4.898979485566356}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 4.898979485566356}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 4.898979485566356}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 4.898979485566356}, "styx.boutiques.model.Inputs1": {"tf": 4.898979485566356}, "styx.boutiques.model.Test": {"tf": 4.898979485566356}, "styx.boutiques.model.OutputFile": {"tf": 4.898979485566356}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 4.898979485566356}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 4.898979485566356}, "styx.boutiques.model.OutputFiles": {"tf": 4.898979485566356}, "styx.boutiques.model.OutputFiles1": {"tf": 4.898979485566356}, "styx.boutiques.model.SuggestedResources": {"tf": 4.898979485566356}, "styx.boutiques.model.ErrorCode": {"tf": 4.898979485566356}, "styx.boutiques.model.Tool": {"tf": 4.898979485566356}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1.4142135623730951}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_camelize": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_snakify": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 52, "m": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 10}, "y": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}, "i": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}, "i": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1.4142135623730951}}, "df": 22}}, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 4}}}, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1, "s": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 6}}}}}, "w": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}, "y": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 1}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}}, "df": 21}}}}, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 2}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}, "styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 21}}, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 1}}}, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 3}}}}}, "f": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 22}}}, "e": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx": {"tf": 1}}, "df": 1}}, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1.4142135623730951}}, "df": 21}}}}}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 2.449489742783178}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage1": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage2": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage3": {"tf": 2.449489742783178}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2.449489742783178}, "styx.boutiques.model.Group": {"tf": 2.449489742783178}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 2.449489742783178}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 2.449489742783178}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 2.449489742783178}, "styx.boutiques.model.Inputs1": {"tf": 2.449489742783178}, "styx.boutiques.model.Test": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFile": {"tf": 2.449489742783178}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 2.449489742783178}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles": {"tf": 2.449489742783178}, "styx.boutiques.model.OutputFiles1": {"tf": 2.449489742783178}, "styx.boutiques.model.SuggestedResources": {"tf": 2.449489742783178}, "styx.boutiques.model.ErrorCode": {"tf": 2.449489742783178}, "styx.boutiques.model.Tool": {"tf": 2.449489742783178}, "styx.cli": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 38, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 2}}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 1}}}}}, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 13, "s": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 6}, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 6}}}}}}, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}}, "df": 21}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}, "o": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1}}}}, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 3}}}}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1.4142135623730951}, "styx.boutiques": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1.7320508075688772}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 6, "/": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}}, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}}, "df": 2}}}}}}}}, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "k": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}}, "y": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.defs": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1}, "styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}}, "df": 33}, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 34, "g": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}}, "df": 1}}}}}}}, "t": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}, "f": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 7}}}}}, "u": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 1}}}}}}}, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 1}}}}}, "i": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "c": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 1}}}}}}}}}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}}, "df": 2, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}}}, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "y": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}}, "f": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}}, "df": 20}}, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.settings.DefsMode": {"tf": 1}}, "df": 1}}}}}}}}}, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}}, "v": {"docs": {}, "df": 0, "/": {"2": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}, "docs": {}, "df": 0}}, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}}}, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.defs": {"tf": 1}}, "df": 1}}}}}}}}}}, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 2}}}}, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 3}}}}}}}}}}, "o": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 10}}}}}}}}}}, "k": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 3, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 4}}}}}}}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}}}, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 21, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}}, "df": 1, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1.4142135623730951}}, "df": 1}}}}}}}}, "r": {"docs": {"styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 1}}}}}}}}}, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {"styx.compiler.settings.DefsMode": {"tf": 1}}, "df": 1, "r": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}}, "df": 1}}, "l": {"docs": {"styx.boutiques": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem": {"tf": 4}, "styx.boutiques.model.ContainerImageItem1": {"tf": 4}, "styx.boutiques.model.ContainerImage1": {"tf": 4}, "styx.boutiques.model.ContainerImage2": {"tf": 4}, "styx.boutiques.model.ContainerImage3": {"tf": 4}, "styx.boutiques.model.ContainerImage": {"tf": 2.449489742783178}, "styx.boutiques.model.EnvironmentVariable": {"tf": 4}, "styx.boutiques.model.Group": {"tf": 4}, "styx.boutiques.model.Input": {"tf": 4}, "styx.boutiques.model.Input1": {"tf": 4}, "styx.boutiques.model.Inputs": {"tf": 4}, "styx.boutiques.model.Inputs1": {"tf": 4}, "styx.boutiques.model.Test": {"tf": 4}, "styx.boutiques.model.OutputFile": {"tf": 4}, "styx.boutiques.model.OutputFile1": {"tf": 4}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 4}, "styx.boutiques.model.OutputFiles": {"tf": 4}, "styx.boutiques.model.OutputFiles1": {"tf": 4}, "styx.boutiques.model.SuggestedResources": {"tf": 4}, "styx.boutiques.model.ErrorCode": {"tf": 4}, "styx.boutiques.model.Tool": {"tf": 4}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1.7320508075688772}}, "df": 23, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}}, "df": 20}}}, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "s": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 1}}}}}}, "e": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 24}}}}}, "h": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}}, "m": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}, "y": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}, "u": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 6}}}}}}}}, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}}, "df": 23, "t": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}}, "g": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "r": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.cli": {"tf": 1}}, "df": 1}}}}}}, "o": {"docs": {"styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.pycodegen.core.collapse": {"tf": 1}, "styx.pycodegen.core.expand": {"tf": 1}}, "df": 3}}, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 15, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}, "j": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}, "s": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 21, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 1}}}}}}}, "i": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}}, "df": 20}}, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}}, "df": 1}}, "x": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 2}}}, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 1}}}}}}}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 2}}}}}}}}}, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 2}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 4}}}}, "t": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 28}, "f": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 24}, "d": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.styxdefs.Metadata.id": {"tf": 1}}, "df": 1}}}}}}}}}, "o": {"docs": {"styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 1}}, "a": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}, "styx.boutiques.utils.boutiques_from_dict": {"tf": 1.4142135623730951}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.compiler.core.compile_descriptor": {"tf": 1}, "styx.pycodegen.core.indent": {"tf": 1.4142135623730951}, "styx.pycodegen.core.comment": {"tf": 1.4142135623730951}, "styx.pycodegen.core.collapse": {"tf": 1.4142135623730951}, "styx.pycodegen.core.expand": {"tf": 1.4142135623730951}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.scope.Scope": {"tf": 1}, "styx.pycodegen.scope.Scope.__init__": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.pycodegen.utils.enquote": {"tf": 1}, "styx.pycodegen.utils.enbrace": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 2}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 64, "m": {"docs": {}, "df": 0, "p": {"docs": {"styx": {"tf": 1}}, "df": 1}}, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.compiler.utils.optional_float_to_int": {"tf": 1.4142135623730951}, "styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 27, "d": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}, "styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 39}, "y": {"docs": {"styx.runners.docker.DockerRunner.start_execution": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1}}, "df": 3}}, "c": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}}}, "t": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 3, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 29, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 2}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2}, "styx.boutiques.model.ContainerImage1": {"tf": 2}, "styx.boutiques.model.ContainerImage2": {"tf": 2}, "styx.boutiques.model.ContainerImage3": {"tf": 2}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2}, "styx.boutiques.model.Group": {"tf": 2}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 2}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 2}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 2}, "styx.boutiques.model.Inputs1": {"tf": 2}, "styx.boutiques.model.Test": {"tf": 2}, "styx.boutiques.model.OutputFile": {"tf": 2}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 2}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2}, "styx.boutiques.model.OutputFiles": {"tf": 2}, "styx.boutiques.model.OutputFiles1": {"tf": 2}, "styx.boutiques.model.SuggestedResources": {"tf": 2}, "styx.boutiques.model.ErrorCode": {"tf": 2}, "styx.boutiques.model.Tool": {"tf": 2}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 30}}}}}}}}}, "d": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.core.comment": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}, "styx.pycodegen.scope.Scope.add_or_die": {"tf": 1}}, "df": 5, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}, "b": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}, "c": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 1}}, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}, "g": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.7320508075688772}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 10}}}}}}}}, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}}, "l": {"docs": {}, "df": 0, "l": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 7, "o": {"docs": {}, "df": 0, "w": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}, "v": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.scope.Scope.add_or_dodge": {"tf": 1}}, "df": 1}}}}}}, "a": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "b": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 1}}}}}}}}, "f": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 9}}}}, "s": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 3}, "p": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 1}}}}}}}}}}}, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1.7320508075688772}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 9, "s": {"docs": {"styx": {"tf": 1.4142135623730951}}, "df": 1}}}}}}, "f": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 3.1622776601683795}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImage1": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImage2": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImage3": {"tf": 3.1622776601683795}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 3.1622776601683795}, "styx.boutiques.model.Group": {"tf": 3.1622776601683795}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 3.1622776601683795}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 3.1622776601683795}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 3.1622776601683795}, "styx.boutiques.model.Inputs1": {"tf": 3.1622776601683795}, "styx.boutiques.model.Test": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFile": {"tf": 3.1622776601683795}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 3.1622776601683795}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFiles": {"tf": 3.1622776601683795}, "styx.boutiques.model.OutputFiles1": {"tf": 3.1622776601683795}, "styx.boutiques.model.SuggestedResources": {"tf": 3.1622776601683795}, "styx.boutiques.model.ErrorCode": {"tf": 3.1622776601683795}, "styx.boutiques.model.Tool": {"tf": 3.1622776601683795}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.id": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 38}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}, "w": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 22, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 1}}}, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "i": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "b": {"docs": {}, "df": 0, "j": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.pycodegen.utils.as_py_literal": {"tf": 1}, "styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 7, "s": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 3}}}}}}, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx.compiler.utils.optional_float_to_int": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 2}}}}}, "s": {"docs": {"styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 1}}}}, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1.4142135623730951}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 3}}}}}, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 22, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}}, "t": {"docs": {"styx.boutiques.model.Type": {"tf": 4.898979485566356}, "styx.boutiques.model.Type1": {"tf": 4.898979485566356}, "styx.boutiques.model.SchemaVersion": {"tf": 4.898979485566356}, "styx.boutiques.model.Type2": {"tf": 4.898979485566356}, "styx.boutiques.model.ListModel": {"tf": 4.898979485566356}, "styx.boutiques.model.Type3": {"tf": 4.898979485566356}, "styx.boutiques.model.Type4": {"tf": 4.898979485566356}, "styx.boutiques.model.FileTemplate": {"tf": 4.898979485566356}, "styx.compiler.core.BtPrimitive": {"tf": 4.898979485566356}}, "df": 9}, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.core.indent": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 2}}}}}, "e": {"docs": {}, "df": 0, "x": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}, "styx.runners.docker.DockerExecution": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.start_execution": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Metadata": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}, "styx.runners.styxdefs.Runner.start_execution": {"tf": 1.4142135623730951}}, "df": 17}}}, "e": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 5}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.runners": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_type": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_opts": {"tf": 1}}, "df": 14, "s": {"docs": {"styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 3}}}}}}, "t": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage2": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage3": {"tf": 1.7320508075688772}, "styx.boutiques.model.ContainerImage": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.7320508075688772}, "styx.boutiques.model.Group": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input": {"tf": 1.7320508075688772}, "styx.boutiques.model.Input1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs": {"tf": 1.7320508075688772}, "styx.boutiques.model.Inputs1": {"tf": 1.7320508075688772}, "styx.boutiques.model.Test": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFile1": {"tf": 1.7320508075688772}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles": {"tf": 1.7320508075688772}, "styx.boutiques.model.OutputFiles1": {"tf": 1.7320508075688772}, "styx.boutiques.model.SuggestedResources": {"tf": 1.7320508075688772}, "styx.boutiques.model.ErrorCode": {"tf": 1.7320508075688772}, "styx.boutiques.model.Tool": {"tf": 1.7320508075688772}}, "df": 21}}}, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.core.expand": {"tf": 1}}, "df": 1}}}, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.pycodegen.utils.as_py_literal": {"tf": 1}}, "df": 1}}}}}}}}}, "n": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {"styx": {"tf": 1}}, "df": 1, "s": {"docs": {"styx": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 2}}}}}}}}}}, "u": {"docs": {}, "df": 0, "m": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9, "s": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}}}}}}}}, "d": {"docs": {"styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 1}, "s": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}}, "df": 1}}}}}, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "y": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}, "r": {"docs": {}, "df": 0, "y": {"docs": {"styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 1}}}}, "m": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "y": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}}, "df": 2}}}}}, "v": {"1": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}, "2": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}, "docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "a": {"docs": {"styx": {"tf": 1}, "styx.boutiques": {"tf": 1}}, "df": 2}}, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "d": {"docs": {"styx.pycodegen.utils.ensure_python_symbol": {"tf": 1.4142135623730951}}, "df": 1, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}}}, "o": {"docs": {}, "df": 0, "r": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}, "r": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}, "r": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "n": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.run": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.run": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.run": {"tf": 1}}, "df": 6, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.compiler.settings.DefsMode": {"tf": 1}}, "df": 2}}}}, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1.4142135623730951}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1}}, "df": 11, "s": {"docs": {"styx": {"tf": 1}, "styx.runners": {"tf": 1}, "styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 3}}}}}, "f": {"docs": {}, "df": 0, "f": {"docs": {"styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 2}}}, "a": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.Type": {"tf": 2.6457513110645907}, "styx.boutiques.model.Type1": {"tf": 2.6457513110645907}, "styx.boutiques.model.SchemaVersion": {"tf": 2.6457513110645907}, "styx.boutiques.model.Type2": {"tf": 2.6457513110645907}, "styx.boutiques.model.ListModel": {"tf": 2.6457513110645907}, "styx.boutiques.model.Type3": {"tf": 2.6457513110645907}, "styx.boutiques.model.Type4": {"tf": 2.6457513110645907}, "styx.boutiques.model.FileTemplate": {"tf": 2.6457513110645907}, "styx.compiler.core.BtPrimitive": {"tf": 2.6457513110645907}}, "df": 9}, "p": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}, "b": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}}}}, "t": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.utils.boutiques_from_dict": {"tf": 1}, "styx.boutiques.utils.boutiques_split_command": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.pycodegen.utils.ensure_camel_case": {"tf": 1}, "styx.pycodegen.utils.python_camelize": {"tf": 1}, "styx.pycodegen.utils.python_snakify": {"tf": 1}, "styx.pycodegen.utils.python_screaming_snakify": {"tf": 1}, "styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 15}}}}}, "c": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 6}}}}}}, "o": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage": {"tf": 2.23606797749979}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 21, "m": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "l": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}}}}}}}}}, "n": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"styx": {"tf": 1}}, "df": 1, "a": {"docs": {}, "df": 0, "l": {"docs": {"styx": {"tf": 1}}, "df": 1}}}}}}}}, "a": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "e": {"docs": {"styx": {"tf": 1}, "styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}, "styx.pycodegen.utils.ensure_python_symbol": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.name": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_tag": {"tf": 1}}, "df": 34, "/": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}}}}}}, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20, "p": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ContainerImage3": {"tf": 1.4142135623730951}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1.4142135623730951}, "styx.boutiques.model.Group": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input": {"tf": 1.4142135623730951}, "styx.boutiques.model.Input1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs": {"tf": 1.4142135623730951}, "styx.boutiques.model.Inputs1": {"tf": 1.4142135623730951}, "styx.boutiques.model.Test": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFile1": {"tf": 1.4142135623730951}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles": {"tf": 1.4142135623730951}, "styx.boutiques.model.OutputFiles1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SuggestedResources": {"tf": 1.4142135623730951}, "styx.boutiques.model.ErrorCode": {"tf": 1.4142135623730951}, "styx.boutiques.model.Tool": {"tf": 1.4142135623730951}}, "df": 20}}}}}, "d": {"docs": {"styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 1}}}}, "o": {"docs": {}, "df": 0, "t": {"docs": {"styx.pycodegen.core.blank_before": {"tf": 1}, "styx.pycodegen.core.blank_after": {"tf": 1}, "styx.pycodegen.utils.ensure_snake_case": {"tf": 1}, "styx.runners.styxdefs.Metadata.container_image_index": {"tf": 1}}, "df": 4}, "n": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.docker.DockerRunner.__init__": {"tf": 1}}, "df": 1}}}, "e": {"docs": {}, "df": 0, "w": {"docs": {"styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.styxdefs.Metadata.__init__": {"tf": 1}}, "df": 2}}}, "h": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20, "h": {"docs": {"styx": {"tf": 1}}, "df": 1}}, "v": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.Type": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type1": {"tf": 1.4142135623730951}, "styx.boutiques.model.SchemaVersion": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type2": {"tf": 1.4142135623730951}, "styx.boutiques.model.ListModel": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type3": {"tf": 1.4142135623730951}, "styx.boutiques.model.Type4": {"tf": 1.4142135623730951}, "styx.boutiques.model.FileTemplate": {"tf": 1.4142135623730951}, "styx.compiler.core.BtPrimitive": {"tf": 1.4142135623730951}}, "df": 9}}}, "o": {"docs": {}, "df": 0, "w": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9}, "s": {"docs": {}, "df": 0, "t": {"docs": {"styx.runners.docker.DockerExecution.input_file": {"tf": 1}, "styx.runners.docker.DockerExecution.output_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.input_file": {"tf": 1}, "styx.runners.dummy.DummyRunner.output_file": {"tf": 1}, "styx.runners.styxdefs.P": {"tf": 1}, "styx.runners.styxdefs.R": {"tf": 1}, "styx.runners.styxdefs.Execution.input_file": {"tf": 1}, "styx.runners.styxdefs.Execution.output_file": {"tf": 1}}, "df": 8}}}, "t": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, ":": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "/": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "s": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}}}}}}}}}}}, "e": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}}, "df": 1}}}}}}, "j": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "h": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "m": {"docs": {}, "df": 0, "a": {"docs": {"styx.boutiques": {"tf": 1}}, "df": 1}}}}}}}}}}, "k": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "w": {"docs": {"styx.boutiques.model.Type": {"tf": 1}, "styx.boutiques.model.Type1": {"tf": 1}, "styx.boutiques.model.SchemaVersion": {"tf": 1}, "styx.boutiques.model.Type2": {"tf": 1}, "styx.boutiques.model.ListModel": {"tf": 1}, "styx.boutiques.model.Type3": {"tf": 1}, "styx.boutiques.model.Type4": {"tf": 1}, "styx.boutiques.model.FileTemplate": {"tf": 1}, "styx.compiler.core.BtPrimitive": {"tf": 1}}, "df": 9, "n": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1}}}}, "e": {"docs": {}, "df": 0, "y": {"docs": {}, "df": 0, "w": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.scope.Scope.python": {"tf": 1}}, "df": 1}}}}}}}}, "u": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "g": {"docs": {}, "df": 0, "e": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.ContainerImage": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 21}}}, "e": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImageItem1": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage1": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage2": {"tf": 2.23606797749979}, "styx.boutiques.model.ContainerImage3": {"tf": 2.23606797749979}, "styx.boutiques.model.EnvironmentVariable": {"tf": 2.23606797749979}, "styx.boutiques.model.Group": {"tf": 2.23606797749979}, "styx.boutiques.model.Input": {"tf": 2.23606797749979}, "styx.boutiques.model.Input1": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs": {"tf": 2.23606797749979}, "styx.boutiques.model.Inputs1": {"tf": 2.23606797749979}, "styx.boutiques.model.Test": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFile": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFile1": {"tf": 2.23606797749979}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles": {"tf": 2.23606797749979}, "styx.boutiques.model.OutputFiles1": {"tf": 2.23606797749979}, "styx.boutiques.model.SuggestedResources": {"tf": 2.23606797749979}, "styx.boutiques.model.ErrorCode": {"tf": 2.23606797749979}, "styx.boutiques.model.Tool": {"tf": 2.23606797749979}, "styx.compiler.defs": {"tf": 1}, "styx.runners.docker.DockerExecution": {"tf": 1}, "styx.runners.docker.DockerRunner": {"tf": 1.4142135623730951}, "styx.runners.docker.DockerRunner.__init__": {"tf": 1}, "styx.runners.dummy.DummyRunner": {"tf": 1.4142135623730951}, "styx.runners.styxdefs.Execution": {"tf": 1}, "styx.runners.styxdefs.Runner": {"tf": 1.4142135623730951}}, "df": 27}}, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "g": {"docs": {"styx.pycodegen.core.PyGen": {"tf": 1}, "styx.pycodegen.format": {"tf": 1}, "styx.pycodegen.format.format_code": {"tf": 1}}, "df": 3}}}}, "n": {"docs": {}, "df": 0, "d": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "f": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "d": {"docs": {"styx.boutiques.model.ContainerImageItem": {"tf": 1}, "styx.boutiques.model.ContainerImageItem1": {"tf": 1}, "styx.boutiques.model.ContainerImage1": {"tf": 1}, "styx.boutiques.model.ContainerImage2": {"tf": 1}, "styx.boutiques.model.ContainerImage3": {"tf": 1}, "styx.boutiques.model.EnvironmentVariable": {"tf": 1}, "styx.boutiques.model.Group": {"tf": 1}, "styx.boutiques.model.Input": {"tf": 1}, "styx.boutiques.model.Input1": {"tf": 1}, "styx.boutiques.model.Inputs": {"tf": 1}, "styx.boutiques.model.Inputs1": {"tf": 1}, "styx.boutiques.model.Test": {"tf": 1}, "styx.boutiques.model.OutputFile": {"tf": 1}, "styx.boutiques.model.OutputFile1": {"tf": 1}, "styx.boutiques.model.ConditionalPathTemplateItem": {"tf": 1}, "styx.boutiques.model.OutputFiles": {"tf": 1}, "styx.boutiques.model.OutputFiles1": {"tf": 1}, "styx.boutiques.model.SuggestedResources": {"tf": 1}, "styx.boutiques.model.ErrorCode": {"tf": 1}, "styx.boutiques.model.Tool": {"tf": 1}}, "df": 20}}}}}, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}}}}}, "i": {"docs": {}, "df": 0, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {"styx.runners.styxdefs.Metadata.id": {"tf": 1}}, "df": 1}}}}}, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "l": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.compiler.utils": {"tf": 1}, "styx.pycodegen": {"tf": 1}, "styx.pycodegen.core": {"tf": 1}}, "df": 3}}}}}}}}, "p": {"docs": {"styx.runners.styxdefs.Metadata": {"tf": 1}}, "df": 1, "p": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "c": {"docs": {}, "df": 0, "a": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "e": {"docs": {"styx.pycodegen.utils.ensure_snake_case": {"tf": 1}}, "df": 1}}}}}}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "s": {"docs": {"styx.pycodegen.utils.enquote": {"tf": 1}}, "df": 1}}}}}}}}}, "pipeline": ["trimmer"], "_isPrebuiltIndex": true}; // mirrored in build-search-index.js (part 1) // Also split on html tags. this is a cheap heuristic, but good enough. diff --git a/styx.html b/styx.html index ec881cc..24c4278 100644 --- a/styx.html +++ b/styx.html @@ -73,12 +73,18 @@

Features

    -
  • Modern Python 3.11+ target
    • +
  • Target modern Python (3.11+)
  • Intellisense & full static type checking for inputs and outputs
  • Documentation generation
  • Custom execution environments via dependency injection
  • Runtime input validation
    • -
  • Unit & integration test generation
    • +
  • Integration test generation
    • +
  • Default runners +
      +
    • Local
      • +
    • Docker
      • +
    • Singularity
      • +

Boutiques descriptor implementation status: 77%

diff --git a/styx/compiler/core.html b/styx/compiler/core.html index 3330962..c6cb848 100644 --- a/styx/compiler/core.html +++ b/styx/compiler/core.html @@ -123,6 +123,9 @@

API Documentation

  • bt_type_to_py_type
    • +
  • + py_expr_is_set +
    • @@ -317,427 +320,433 @@

    165 166 return buf 167 -168 -169def _generate_raise_value_err(obj: str, expectation: str, reality: str | None = None) -> LineBuffer: -170 fstr = "" -171 if "{" in obj or "{" in expectation or (reality is not None and "{" in reality): -172 fstr = "f" +168 def py_expr_is_set(self) -> str: +169 if self.type.primitive == BtPrimitive.Flag: +170 return self.py_symbol +171 return f"({self.py_symbol} is not None)" +172 173 -174 return ( -175 [f'raise ValueError({fstr}"{obj} must be {expectation} but was {reality}")'] -176 if reality is not None -177 else [f'raise ValueError({fstr}"{obj} must be {expectation}")'] -178 ) -179 -180 -181def _generate_range_validation_expr( -182 buf: LineBuffer, -183 bt_input: BtInput, -184) -> None: -185 val_opt = "" -186 if bt_input.type.is_optional: -187 val_opt = f"{bt_input.py_symbol} is not None and " -188 -189 # List argument length validation -190 if bt_input.list_minimum is not None and bt_input.list_maximum is not None: -191 # Case: len(list[]) == X -192 assert bt_input.list_minimum <= bt_input.list_maximum -193 if bt_input.list_minimum == bt_input.list_maximum: -194 buf.extend([ -195 f"if {val_opt}(len({bt_input.py_symbol}) != {bt_input.list_minimum}): ", -196 *indent( -197 _generate_raise_value_err( -198 f"Length of '{bt_input.py_symbol}'", -199 f"{bt_input.list_minimum}", -200 f"{{len({bt_input.py_symbol})}}", -201 ) -202 ), -203 ]) -204 else: -205 # Case: X <= len(list[]) <= Y -206 buf.extend([ -207 f"if {val_opt}not ({bt_input.list_minimum} <= " -208 f"len({bt_input.py_symbol}) <= {bt_input.list_maximum}): ", -209 *indent( -210 _generate_raise_value_err( -211 f"Length of '{bt_input.py_symbol}'", -212 f"between {bt_input.list_minimum} and {bt_input.list_maximum}", -213 f"{{len({bt_input.py_symbol})}}", -214 ) -215 ), -216 ]) -217 elif bt_input.list_minimum is not None: -218 # Case len(list[]) >= X -219 buf.extend([ -220 f"if {val_opt}not ({bt_input.list_minimum} <= len({bt_input.py_symbol})): ", -221 *indent( -222 _generate_raise_value_err( -223 f"Length of '{bt_input.py_symbol}'", -224 f"greater than {bt_input.list_minimum}", -225 f"{{len({bt_input.py_symbol})}}", -226 ) -227 ), -228 ]) -229 elif bt_input.list_maximum is not None: -230 # Case len(list[]) <= X -231 buf.extend([ -232 f"if {val_opt}not (len({bt_input.py_symbol}) <= {bt_input.list_maximum}): ", -233 *indent( -234 _generate_raise_value_err( -235 f"Length of '{bt_input.py_symbol}'", -236 f"less than {bt_input.list_maximum}", -237 f"{{len({bt_input.py_symbol})}}", -238 ) -239 ), -240 ]) -241 -242 # Numeric argument range validation -243 op_min = "<" if bt_input.minimum_exclusive else "<=" -244 op_max = "<" if bt_input.maximum_exclusive else "<=" -245 if bt_input.minimum is not None and bt_input.maximum is not None: -246 # Case: X <= arg <= Y -247 assert bt_input.minimum <= bt_input.maximum -248 if bt_input.type.is_list: -249 buf.extend([ -250 f"if {val_opt}not ({bt_input.minimum} {op_min} min({bt_input.py_symbol}) " -251 f"and max({bt_input.py_symbol}) {op_max} {bt_input.maximum}): ", -252 *indent( -253 _generate_raise_value_err( -254 f"All elements of '{bt_input.py_symbol}'", -255 f"between {bt_input.minimum} {op_min} x {op_max} {bt_input.maximum}", -256 ) -257 ), -258 ]) -259 else: -260 buf.extend([ -261 f"if {val_opt}not ({bt_input.minimum} {op_min} {bt_input.py_symbol} {op_max} {bt_input.maximum}): ", -262 *indent( -263 _generate_raise_value_err( -264 f"'{bt_input.py_symbol}'", -265 f"between {bt_input.minimum} {op_min} x {op_max} {bt_input.maximum}", -266 f"{{{bt_input.py_symbol}}}", -267 ) -268 ), -269 ]) -270 elif bt_input.minimum is not None: -271 # Case: X <= arg -272 if bt_input.type.is_list: -273 buf.extend([ -274 f"if {val_opt}not ({bt_input.minimum} {op_min} min({bt_input.py_symbol})): ", -275 *indent( -276 _generate_raise_value_err( -277 f"All elements of '{bt_input.py_symbol}'", -278 f"greater than {bt_input.minimum} {op_min} x", -279 ) -280 ), -281 ]) -282 else: -283 buf.extend([ -284 f"if {val_opt}not ({bt_input.minimum} {op_min} {bt_input.py_symbol}): ", -285 *indent( -286 _generate_raise_value_err( -287 f"'{bt_input.py_symbol}'", -288 f"greater than {bt_input.minimum} {op_min} x", -289 f"{{{bt_input.py_symbol}}}", -290 ) -291 ), -292 ]) -293 elif bt_input.maximum is not None: -294 # Case: arg <= X -295 if bt_input.type.is_list: -296 buf.extend([ -297 f"if {val_opt}not (max({bt_input.py_symbol}) {op_max} {bt_input.maximum}): ", -298 *indent( -299 _generate_raise_value_err( -300 f"All elements of '{bt_input.py_symbol}'", -301 f"less than x {op_max} {bt_input.maximum}", -302 ) -303 ), -304 ]) -305 else: -306 buf.extend([ -307 f"if {val_opt}not ({bt_input.py_symbol} {op_max} {bt_input.maximum}): ", -308 *indent( -309 _generate_raise_value_err( -310 f"'{bt_input.py_symbol}'", -311 f"less than x {op_max} {bt_input.maximum}", -312 f"{{{bt_input.py_symbol}}}", -313 ) -314 ), -315 ]) -316 -317 -318def _generate_group_constraint_expr( -319 buf: LineBuffer, -320 group: bt.Group, # type: ignore -321) -> None: -322 if group.mutually_exclusive: -323 txt_members = [enquote(x) for x in expand(",\\n\n".join(group.members))] -324 check_members = expand(" +\n".join([f"({x} is not None)" for x in group.members])) -325 buf.extend(["if ("]) -326 buf.extend(indent(check_members)) -327 buf.extend([ -328 ") > 1:", -329 *indent([ -330 "raise ValueError(", -331 *indent([ -332 '"Only one of the following arguments can be specified:\\n"', -333 *txt_members, -334 ]), -335 ")", -336 ]), -337 ]) -338 if group.all_or_none: -339 txt_members = [enquote(x) for x in expand(",\\n\n".join(group.members))] -340 check_members = expand(" ==\n".join([f"({x} is None)" for x in group.members])) -341 buf.extend(["if not ("]) -342 buf.extend(indent(check_members)) -343 buf.extend([ -344 "):", -345 *indent([ -346 "raise ValueError(", -347 *indent([ -348 '"All or none of the following arguments must be specified:\\n"', -349 *txt_members, -350 ]), -351 ")", -352 ]), -353 ]) -354 if group.one_is_required: -355 txt_members = [enquote("- " + x) for x in expand("\\n\n".join(group.members))] -356 check_members = expand(" or\n".join([f"({x} is not None)" for x in group.members])) -357 buf.extend(["if not ("]) -358 buf.extend(indent(check_members)) -359 buf.extend([ -360 "):", -361 *indent([ -362 "raise ValueError(", -363 *indent([ -364 '"One of the following arguments must be specified:\\n"', -365 *txt_members, -366 ]), -367 ")", -368 ]), -369 ]) -370 -371 -372def _generate_output_file_expr( -373 func_scope: Scope, -374 buf_header: LineBuffer, -375 buf_body: LineBuffer, -376 bt_outputs: list[bt.OutputFiles], # type: ignore -377 inputs: list[BtInput], -378 py_var_output_class: str, -379 py_var_execution: str, -380 py_var_ret: str, -381) -> None: -382 py_rstrip_fun = func_scope.add_or_dodge("_rstrip") -383 if any([out.path_template_stripped_extensions is not None for out in bt_outputs]): -384 buf_body.extend([ -385 f"def {py_rstrip_fun}(s, r):", -386 *indent([ -387 "for postfix in r:", -388 *indent([ -389 "if s.endswith(postfix):", -390 *indent(["return s[: -len(postfix)]"]), -391 ]), -392 "return s", -393 ]), -394 ]) -395 -396 buf_body.append(f"{py_var_ret} = {py_var_output_class}(") -397 -398 for out in bt_outputs: -399 # Declaration -400 buf_header.extend( -401 indent([ -402 f"{out.id}: R", -403 f'"""{out.description}"""', -404 ]) -405 ) -406 -407 strip_extensions = out.path_template_stripped_extensions is not None -408 -409 # Expression -410 if out.path_template is not None: -411 s = out.path_template -412 for a in inputs: -413 if strip_extensions: -414 exts = as_py_literal(out.path_template_stripped_extensions, "'") -415 s = s.replace(f"{a.bt_ref}", enbrace(f"{py_rstrip_fun}({a.py_symbol}, {exts})")) -416 else: -417 s = s.replace(f"{a.bt_ref}", enbrace(a.py_symbol)) -418 -419 s_optional = ", optional=True" if out.optional else "" -420 -421 buf_body.extend(indent([f"{out.id}={py_var_execution}.output_file(f{enquote(s)}{s_optional}),"])) -422 -423 buf_body.extend([")"]) -424 +174def _generate_raise_value_err(obj: str, expectation: str, reality: str | None = None) -> LineBuffer: +175 fstr = "" +176 if "{" in obj or "{" in expectation or (reality is not None and "{" in reality): +177 fstr = "f" +178 +179 return ( +180 [f'raise ValueError({fstr}"{obj} must be {expectation} but was {reality}")'] +181 if reality is not None +182 else [f'raise ValueError({fstr}"{obj} must be {expectation}")'] +183 ) +184 +185 +186def _generate_range_validation_expr( +187 buf: LineBuffer, +188 bt_input: BtInput, +189) -> None: +190 val_opt = "" +191 if bt_input.type.is_optional: +192 val_opt = f"{bt_input.py_symbol} is not None and " +193 +194 # List argument length validation +195 if bt_input.list_minimum is not None and bt_input.list_maximum is not None: +196 # Case: len(list[]) == X +197 assert bt_input.list_minimum <= bt_input.list_maximum +198 if bt_input.list_minimum == bt_input.list_maximum: +199 buf.extend([ +200 f"if {val_opt}(len({bt_input.py_symbol}) != {bt_input.list_minimum}): ", +201 *indent( +202 _generate_raise_value_err( +203 f"Length of '{bt_input.py_symbol}'", +204 f"{bt_input.list_minimum}", +205 f"{{len({bt_input.py_symbol})}}", +206 ) +207 ), +208 ]) +209 else: +210 # Case: X <= len(list[]) <= Y +211 buf.extend([ +212 f"if {val_opt}not ({bt_input.list_minimum} <= " +213 f"len({bt_input.py_symbol}) <= {bt_input.list_maximum}): ", +214 *indent( +215 _generate_raise_value_err( +216 f"Length of '{bt_input.py_symbol}'", +217 f"between {bt_input.list_minimum} and {bt_input.list_maximum}", +218 f"{{len({bt_input.py_symbol})}}", +219 ) +220 ), +221 ]) +222 elif bt_input.list_minimum is not None: +223 # Case len(list[]) >= X +224 buf.extend([ +225 f"if {val_opt}not ({bt_input.list_minimum} <= len({bt_input.py_symbol})): ", +226 *indent( +227 _generate_raise_value_err( +228 f"Length of '{bt_input.py_symbol}'", +229 f"greater than {bt_input.list_minimum}", +230 f"{{len({bt_input.py_symbol})}}", +231 ) +232 ), +233 ]) +234 elif bt_input.list_maximum is not None: +235 # Case len(list[]) <= X +236 buf.extend([ +237 f"if {val_opt}not (len({bt_input.py_symbol}) <= {bt_input.list_maximum}): ", +238 *indent( +239 _generate_raise_value_err( +240 f"Length of '{bt_input.py_symbol}'", +241 f"less than {bt_input.list_maximum}", +242 f"{{len({bt_input.py_symbol})}}", +243 ) +244 ), +245 ]) +246 +247 # Numeric argument range validation +248 op_min = "<" if bt_input.minimum_exclusive else "<=" +249 op_max = "<" if bt_input.maximum_exclusive else "<=" +250 if bt_input.minimum is not None and bt_input.maximum is not None: +251 # Case: X <= arg <= Y +252 assert bt_input.minimum <= bt_input.maximum +253 if bt_input.type.is_list: +254 buf.extend([ +255 f"if {val_opt}not ({bt_input.minimum} {op_min} min({bt_input.py_symbol}) " +256 f"and max({bt_input.py_symbol}) {op_max} {bt_input.maximum}): ", +257 *indent( +258 _generate_raise_value_err( +259 f"All elements of '{bt_input.py_symbol}'", +260 f"between {bt_input.minimum} {op_min} x {op_max} {bt_input.maximum}", +261 ) +262 ), +263 ]) +264 else: +265 buf.extend([ +266 f"if {val_opt}not ({bt_input.minimum} {op_min} {bt_input.py_symbol} {op_max} {bt_input.maximum}): ", +267 *indent( +268 _generate_raise_value_err( +269 f"'{bt_input.py_symbol}'", +270 f"between {bt_input.minimum} {op_min} x {op_max} {bt_input.maximum}", +271 f"{{{bt_input.py_symbol}}}", +272 ) +273 ), +274 ]) +275 elif bt_input.minimum is not None: +276 # Case: X <= arg +277 if bt_input.type.is_list: +278 buf.extend([ +279 f"if {val_opt}not ({bt_input.minimum} {op_min} min({bt_input.py_symbol})): ", +280 *indent( +281 _generate_raise_value_err( +282 f"All elements of '{bt_input.py_symbol}'", +283 f"greater than {bt_input.minimum} {op_min} x", +284 ) +285 ), +286 ]) +287 else: +288 buf.extend([ +289 f"if {val_opt}not ({bt_input.minimum} {op_min} {bt_input.py_symbol}): ", +290 *indent( +291 _generate_raise_value_err( +292 f"'{bt_input.py_symbol}'", +293 f"greater than {bt_input.minimum} {op_min} x", +294 f"{{{bt_input.py_symbol}}}", +295 ) +296 ), +297 ]) +298 elif bt_input.maximum is not None: +299 # Case: arg <= X +300 if bt_input.type.is_list: +301 buf.extend([ +302 f"if {val_opt}not (max({bt_input.py_symbol}) {op_max} {bt_input.maximum}): ", +303 *indent( +304 _generate_raise_value_err( +305 f"All elements of '{bt_input.py_symbol}'", +306 f"less than x {op_max} {bt_input.maximum}", +307 ) +308 ), +309 ]) +310 else: +311 buf.extend([ +312 f"if {val_opt}not ({bt_input.py_symbol} {op_max} {bt_input.maximum}): ", +313 *indent( +314 _generate_raise_value_err( +315 f"'{bt_input.py_symbol}'", +316 f"less than x {op_max} {bt_input.maximum}", +317 f"{{{bt_input.py_symbol}}}", +318 ) +319 ), +320 ]) +321 +322 +323def _generate_group_constraint_expr( +324 buf: LineBuffer, +325 group: bt.Group, # type: ignore +326 args_lookup: dict[str, BtInput], +327) -> None: +328 group_args = [args_lookup[x] for x in group.members] +329 if group.mutually_exclusive: +330 txt_members = [enquote(x) for x in expand(",\\n\n".join(group.members))] +331 check_members = expand(" +\n".join([x.py_expr_is_set() for x in group_args])) +332 buf.extend(["if ("]) +333 buf.extend(indent(check_members)) +334 buf.extend([ +335 ") > 1:", +336 *indent([ +337 "raise ValueError(", +338 *indent([ +339 '"Only one of the following arguments can be specified:\\n"', +340 *txt_members, +341 ]), +342 ")", +343 ]), +344 ]) +345 if group.all_or_none: +346 txt_members = [enquote(x) for x in expand(",\\n\n".join(group.members))] +347 check_members = expand(" ==\n".join([x.py_expr_is_set() for x in group_args])) +348 buf.extend(["if not ("]) +349 buf.extend(indent(check_members)) +350 buf.extend([ +351 "):", +352 *indent([ +353 "raise ValueError(", +354 *indent([ +355 '"All or none of the following arguments must be specified:\\n"', +356 *txt_members, +357 ]), +358 ")", +359 ]), +360 ]) +361 if group.one_is_required: +362 txt_members = [enquote("- " + x) for x in expand("\\n\n".join(group.members))] +363 check_members = expand(" or\n".join([x.py_expr_is_set() for x in group_args])) +364 buf.extend(["if not ("]) +365 buf.extend(indent(check_members)) +366 buf.extend([ +367 "):", +368 *indent([ +369 "raise ValueError(", +370 *indent([ +371 '"One of the following arguments must be specified:\\n"', +372 *txt_members, +373 ]), +374 ")", +375 ]), +376 ]) +377 +378 +379def _generate_output_file_expr( +380 func_scope: Scope, +381 buf_header: LineBuffer, +382 buf_body: LineBuffer, +383 bt_outputs: list[bt.OutputFiles], # type: ignore +384 inputs: list[BtInput], +385 py_var_output_class: str, +386 py_var_execution: str, +387 py_var_ret: str, +388) -> None: +389 py_rstrip_fun = func_scope.add_or_dodge("_rstrip") +390 if any([out.path_template_stripped_extensions is not None for out in bt_outputs]): +391 buf_body.extend([ +392 f"def {py_rstrip_fun}(s, r):", +393 *indent([ +394 "for postfix in r:", +395 *indent([ +396 "if s.endswith(postfix):", +397 *indent(["return s[: -len(postfix)]"]), +398 ]), +399 "return s", +400 ]), +401 ]) +402 +403 buf_body.append(f"{py_var_ret} = {py_var_output_class}(") +404 +405 for out in bt_outputs: +406 # Declaration +407 buf_header.extend( +408 indent([ +409 f"{out.id}: R", +410 f'"""{out.description}"""', +411 ]) +412 ) +413 +414 strip_extensions = out.path_template_stripped_extensions is not None +415 +416 # Expression +417 if out.path_template is not None: +418 s = out.path_template +419 for a in inputs: +420 if strip_extensions: +421 exts = as_py_literal(out.path_template_stripped_extensions, "'") +422 s = s.replace(f"{a.bt_ref}", enbrace(f"{py_rstrip_fun}({a.py_symbol}, {exts})")) +423 else: +424 s = s.replace(f"{a.bt_ref}", enbrace(a.py_symbol)) 425 -426def _boutiques_replace_vars(s: str, key_value: dict[str, str]) -> str: -427 for k, v in key_value.items(): -428 s = s.replace(k, v) -429 return s -430 +426 s_optional = ", optional=True" if out.optional else "" +427 +428 buf_body.extend(indent([f"{out.id}={py_var_execution}.output_file(f{enquote(s)}{s_optional}),"])) +429 +430 buf_body.extend([")"]) 431 -432def _from_boutiques(tool: bt.Tool, settings: CompilerSettings) -> str: # type: ignore -433 # Todo: this is stupid -434 tool_hash: str = hashlib.sha1(tool.model_dump_json().encode()).hexdigest() -435 -436 module_scope = Scope(parent=Scope.python()) -437 function_scope = Scope(parent=module_scope) +432 +433def _boutiques_replace_vars(s: str, key_value: dict[str, str]) -> str: +434 for k, v in key_value.items(): +435 s = s.replace(k, v) +436 return s +437 438 -439 mod = PyModule() -440 -441 # Module level symbols -442 module_scope.add_or_die("styx") -443 module_scope.add_or_die("P") -444 module_scope.add_or_die("R") -445 module_scope.add_or_die("Runner") -446 module_scope.add_or_die("Execution") -447 module_scope.add_or_die("Metadata") -448 py_var_function = module_scope.add_or_dodge(python_snakify(tool.name)) -449 py_var_output_class = module_scope.add_or_dodge(f"{python_camelize(tool.name)}Outputs") -450 py_var_metadata = module_scope.add_or_dodge(f"{python_screaming_snakify(tool.name)}_METADATA") -451 -452 # Function level symbols -453 py_var_runner = function_scope.add_or_die("runner") -454 py_var_execution = function_scope.add_or_die("execution") -455 py_var_cargs = function_scope.add_or_die("cargs") -456 py_var_ret = function_scope.add_or_die("ret") -457 -458 # Function body -459 buf_body: LineBuffer = [] -460 -461 # Function arguments -462 args: list[BtInput] = [] -463 for i in tool.inputs: -464 args.append(BtInput(i, scope=function_scope)) -465 -466 # Docstring -467 docstring = tool.description -468 -469 # Arguments -470 cmd = boutiques_split_command(tool.command_line) -471 args_lookup = {a.bt_ref: a for a in args} +439def _from_boutiques(tool: bt.Tool, settings: CompilerSettings) -> str: # type: ignore +440 # Todo: this is stupid +441 tool_hash: str = hashlib.sha1(tool.model_dump_json().encode()).hexdigest() +442 +443 module_scope = Scope(parent=Scope.python()) +444 function_scope = Scope(parent=module_scope) +445 +446 mod = PyModule() +447 +448 # Module level symbols +449 module_scope.add_or_die("styx") +450 module_scope.add_or_die("P") +451 module_scope.add_or_die("R") +452 module_scope.add_or_die("Runner") +453 module_scope.add_or_die("Execution") +454 module_scope.add_or_die("Metadata") +455 py_var_function = module_scope.add_or_dodge(python_snakify(tool.name)) +456 py_var_output_class = module_scope.add_or_dodge(f"{python_camelize(tool.name)}Outputs") +457 py_var_metadata = module_scope.add_or_dodge(f"{python_screaming_snakify(tool.name)}_METADATA") +458 +459 # Function level symbols +460 py_var_runner = function_scope.add_or_die("runner") +461 py_var_execution = function_scope.add_or_die("execution") +462 py_var_cargs = function_scope.add_or_die("cargs") +463 py_var_ret = function_scope.add_or_die("ret") +464 +465 # Function body +466 buf_body: LineBuffer = [] +467 +468 # Function arguments +469 args: list[BtInput] = [] +470 for i in tool.inputs: +471 args.append(BtInput(i, scope=function_scope)) 472 -473 pyargs = [PyArg(name="runner", type="Runner[P, R]", default=None, docstring="Command runner")] -474 pyargs += [PyArg(name=i.py_symbol, type=i.py_type, default=i.py_default, docstring=i.docstring) for i in args] +473 # Docstring +474 docstring = tool.description 475 -476 # Input validation -477 for i in args: -478 _generate_range_validation_expr(buf_body, i) -479 -480 if tool.groups is not None: -481 for group in tool.groups: -482 _generate_group_constraint_expr(buf_body, group) +476 # Arguments +477 cmd = boutiques_split_command(tool.command_line) +478 args_lookup = {a.bt_ref: a for a in args} +479 args_lookup_pyref = {a.py_symbol: a for a in args} +480 +481 pyargs = [PyArg(name="runner", type="Runner[P, R]", default=None, docstring="Command runner")] +482 pyargs += [PyArg(name=i.py_symbol, type=i.py_type, default=i.py_default, docstring=i.docstring) for i in args] 483 -484 # Function body -485 buf_body.extend([ -486 f"{py_var_execution} = {py_var_runner}.start_execution({py_var_metadata})", -487 f"{py_var_cargs} = []", -488 ]) -489 -490 # Command line args building -491 for segment in cmd: -492 if segment in args_lookup: -493 i = args_lookup[segment] -494 buf_body.extend(i.py_expr) -495 else: -496 buf_body.append(f"{py_var_cargs}.append({enquote(segment)})") +484 # Input validation +485 for i in args: +486 _generate_range_validation_expr(buf_body, i) +487 +488 if tool.groups is not None: +489 for group in tool.groups: +490 _generate_group_constraint_expr(buf_body, group, args_lookup_pyref) +491 +492 # Function body +493 buf_body.extend([ +494 f"{py_var_execution} = {py_var_runner}.start_execution({py_var_metadata})", +495 f"{py_var_cargs} = []", +496 ]) 497 -498 buf_body.append(f"{py_var_execution}.run({py_var_cargs})") -499 -500 # Definitions -501 if settings.defs_mode == DefsMode.INLINE: -502 defs = STYX_DEFINITIONS -503 elif settings.defs_mode == DefsMode.IMPORT: -504 defs = ["from styx.runners.styxdefs import *"] -505 else: -506 return collapse(STYX_DEFINITIONS) -507 -508 buf_header = [] -509 -510 metadata: dict[str, str | int | float] = { -511 "id": tool_hash, -512 "name": tool.name, -513 } -514 -515 if tool.container_image is not None: -516 if tool.container_image.root.type is not None: -517 metadata["container_image_type"] = tool.container_image.root.type.name -518 if tool.container_image.root.index is not None: -519 metadata["container_image_index"] = tool.container_image.root.index -520 if tool.container_image.root.image is not None: -521 metadata["container_image_tag"] = tool.container_image.root.image -522 -523 # Static metadata -524 buf_header.extend([ -525 *defs, -526 "", -527 "", -528 f"{py_var_metadata} = Metadata(", -529 *indent([f"{k}={as_py_literal(v)}," for k, v in metadata.items()]), -530 ")", -531 ]) -532 -533 buf_header.extend([ -534 "", -535 "", -536 f"class {py_var_output_class}(typing.NamedTuple, typing.Generic[R]):", -537 *indent([ -538 '"""', -539 f"Output object returned when calling `{py_var_function}(...)`.", -540 '"""', -541 ]), -542 ]) -543 -544 # Output files -545 if tool.output_files is not None: -546 _generate_output_file_expr( -547 function_scope, -548 buf_header, -549 buf_body, -550 tool.output_files, -551 args, -552 py_var_output_class, -553 py_var_execution, -554 py_var_ret, -555 ) -556 -557 buf_body.extend([ -558 f"{py_var_execution}.finalize()", -559 f"return {py_var_ret}", -560 ]) -561 -562 mod.header.extend(buf_header) -563 -564 mod.funcs.append( -565 PyFunc( -566 name=py_var_function, -567 args=pyargs, -568 return_type=f"{py_var_output_class}[R]", -569 return_descr=f"NamedTuple of outputs " f"(described in `{py_var_output_class}`).", -570 docstring_body=docstring, -571 body=buf_body, -572 ) -573 ) -574 -575 mod.imports.extend(["import typing"]) -576 mod.imports.sort() -577 -578 code = mod.text() -579 code_formatted = format_code(code) -580 if code_formatted is None: -581 print("WARNING: Failed to format code") -582 return code -583 return code_formatted -584 -585 -586def compile_descriptor(descriptor: bt.Tool, settings: CompilerSettings) -> str: # type: ignore -587 """Compile a Boutiques descriptor to Python code.""" -588 return _from_boutiques(descriptor, settings) +498 # Command line args building +499 for segment in cmd: +500 if segment in args_lookup: +501 i = args_lookup[segment] +502 buf_body.extend(i.py_expr) +503 else: +504 buf_body.append(f"{py_var_cargs}.append({enquote(segment)})") +505 +506 # Definitions +507 if settings.defs_mode == DefsMode.INLINE: +508 defs = STYX_DEFINITIONS +509 elif settings.defs_mode == DefsMode.IMPORT: +510 defs = ["from styx.runners.styxdefs import *"] +511 else: +512 return collapse(STYX_DEFINITIONS) +513 +514 buf_header = [] +515 +516 metadata: dict[str, str | int | float] = { +517 "id": tool_hash, +518 "name": tool.name, +519 } +520 +521 if tool.container_image is not None: +522 if tool.container_image.root.type is not None: +523 metadata["container_image_type"] = tool.container_image.root.type.name +524 if tool.container_image.root.index is not None: +525 metadata["container_image_index"] = tool.container_image.root.index +526 if tool.container_image.root.image is not None: +527 metadata["container_image_tag"] = tool.container_image.root.image +528 +529 # Static metadata +530 buf_header.extend([ +531 *defs, +532 "", +533 "", +534 f"{py_var_metadata} = Metadata(", +535 *indent([f"{k}={as_py_literal(v)}," for k, v in metadata.items()]), +536 ")", +537 ]) +538 +539 buf_header.extend([ +540 "", +541 "", +542 f"class {py_var_output_class}(typing.NamedTuple, typing.Generic[R]):", +543 *indent([ +544 '"""', +545 f"Output object returned when calling `{py_var_function}(...)`.", +546 '"""', +547 ]), +548 ]) +549 +550 # Output files +551 if tool.output_files is not None: +552 _generate_output_file_expr( +553 function_scope, +554 buf_header, +555 buf_body, +556 tool.output_files, +557 args, +558 py_var_output_class, +559 py_var_execution, +560 py_var_ret, +561 ) +562 +563 buf_body.extend([ +564 f"{py_var_execution}.run({py_var_cargs})", +565 f"return {py_var_ret}", +566 ]) +567 +568 mod.header.extend(buf_header) +569 +570 mod.funcs.append( +571 PyFunc( +572 name=py_var_function, +573 args=pyargs, +574 return_type=f"{py_var_output_class}[R]", +575 return_descr=f"NamedTuple of outputs " f"(described in `{py_var_output_class}`).", +576 docstring_body=docstring, +577 body=buf_body, +578 ) +579 ) +580 +581 mod.imports.extend(["import typing"]) +582 mod.imports.sort() +583 +584 code = mod.text() +585 code_formatted = format_code(code) +586 if code_formatted is None: +587 print("WARNING: Failed to format code") +588 return code +589 return code_formatted +590 +591 +592def compile_descriptor(descriptor: bt.Tool, settings: CompilerSettings) -> str: # type: ignore +593 """Compile a Boutiques descriptor to Python code.""" +594 return _from_boutiques(descriptor, settings) @@ -1109,6 +1118,11 @@

    Inherited Members
    165 buf.extend(indent([f"cargs.append({py_obj})"], lvl)) 166 167 return buf +168 +169 def py_expr_is_set(self) -> str: +170 if self.type.primitive == BtPrimitive.Flag: +171 return self.py_symbol +172 return f"({self.py_symbol} is not None)" @@ -1387,6 +1401,27 @@
    Inherited Members
    + +
    + +
    + + def + py_expr_is_set(self) -> str: + + + +
    + + 
    169    def py_expr_is_set(self) -> str:
+170        if self.type.primitive == BtPrimitive.Flag:
+171            return self.py_symbol
+172        return f"({self.py_symbol} is not None)"
+
    + + + +
    @@ -1400,9 +1435,9 @@
    Inherited Members
    - 
    587def compile_descriptor(descriptor: bt.Tool, settings: CompilerSettings) -> str:  # type: ignore
-588    """Compile a Boutiques descriptor to Python code."""
-589    return _from_boutiques(descriptor, settings)
+            
    593def compile_descriptor(descriptor: bt.Tool, settings: CompilerSettings) -> str:  # type: ignore
+594    """Compile a Boutiques descriptor to Python code."""
+595    return _from_boutiques(descriptor, settings)
 
    
 
 
diff --git a/styx/runners.html b/styx/runners.html
index 81f548f..edbded6 100644
--- a/styx/runners.html
+++ b/styx/runners.html
@@ -29,8 +29,8 @@
 
             
    Submodules
    
             
 
diff --git a/styx/runners/docker.html b/styx/runners/docker.html
new file mode 100644
index 0000000..cfc83aa
--- /dev/null
+++ b/styx/runners/docker.html
@@ -0,0 +1,819 @@
+
+
+
+    
+    
+    
+    styx.runners.docker API documentation
+
+    
+    
+    
+    
+    
+    
+
+    
+    
    
+            
    
+                    
    
+styx.runners.docker    
    
+
+                
+                        
+
+                        
+
+                        
      1import pathlib as pl
+  2import re
+  3from collections import deque
+  4from concurrent.futures import ThreadPoolExecutor
+  5from functools import partial
+  6from subprocess import PIPE, CalledProcessError, Popen
+  7from typing import Callable
+  8
+  9from styx.runners.styxdefs import Execution, Metadata, Runner
+ 10
+ 11
+ 12def _docker_mount(host_path: str, container_path: str, readonly: bool) -> str:
+ 13    host_path = host_path.replace('"', r"\"")
+ 14    container_path = container_path.replace('"', r"\"")
+ 15    host_path = host_path.replace("\\", "\\\\")
+ 16    container_path = container_path.replace("\\", "\\\\")
+ 17    return f"type=bind,source={host_path},target={container_path}{',readonly' if readonly else ''}"
+ 18
+ 19
+ 20class DockerExecution(Execution[pl.Path, pl.Path]):
+ 21    def __init__(self, metadata: Metadata, output_dir: pl.Path) -> None:
+ 22        self.metadata = metadata
+ 23        self.input_files: list[tuple[pl.Path, str]] = []
+ 24        self.input_file_next_id = 0
+ 25        self.output_files: list[tuple[pl.Path, str]] = []
+ 26        self.output_file_next_id = 0
+ 27        self.output_dir = output_dir
+ 28
+ 29    def input_file(self, host_file: pl.Path) -> str:
+ 30        local_file = f"/styx_input/{self.input_file_next_id}/{host_file.name}"
+ 31        self.input_file_next_id += 1
+ 32        self.input_files.append((host_file, local_file))
+ 33        return local_file
+ 34
+ 35    def output_file(self, local_file: str, optional: bool = False) -> pl.Path:
+ 36        return self.output_dir / local_file
+ 37
+ 38    def run(self, cargs: list[str]) -> None:
+ 39        mounts: list[str] = []
+ 40
+ 41        for i, (host_file, local_file) in enumerate(self.input_files):
+ 42            mounts.append("--mount")
+ 43            mounts.append(_docker_mount(host_file.absolute().as_posix(), local_file, readonly=True))
+ 44
+ 45        # Output directory
+ 46        self.output_dir.mkdir(parents=True, exist_ok=True)
+ 47
+ 48        mounts.append("--mount")
+ 49        mounts.append(_docker_mount(self.output_dir.absolute().as_posix(), "/styx_output", readonly=False))
+ 50
+ 51        docker_extra_args: list[str] = []
+ 52        container = self.metadata.container_image_tag
+ 53
+ 54        if container is None:
+ 55            raise ValueError("No container image tag specified in metadata")
+ 56
+ 57        docker_command = [
+ 58            "docker",
+ 59            "run",
+ 60            "--rm",
+ 61            "-w",
+ 62            "/styx_output",
+ 63            *mounts,
+ 64            "--entrypoint",
+ 65            "/bin/bash",
+ 66            *docker_extra_args,
+ 67            container,
+ 68            "-l",
+ 69            "-c",
+ 70            " ".join(cargs),
+ 71        ]
+ 72
+ 73        print(f"Executing docker command: '{docker_command}'")
+ 74
+ 75        def stdout_handler(line: str) -> None:
+ 76            print(line)
+ 77
+ 78        def stderr_handler(line: str) -> None:
+ 79            print(line)
+ 80
+ 81        with Popen(docker_command, text=True, stdout=PIPE, stderr=PIPE) as process:
+ 82            with ThreadPoolExecutor(2) as pool:  # two threads to handle the streams
+ 83                exhaust = partial(pool.submit, partial(deque, maxlen=0))
+ 84                exhaust(stdout_handler(line[:-1]) for line in process.stdout)  # type: ignore
+ 85                exhaust(stderr_handler(line[:-1]) for line in process.stderr)  # type: ignore
+ 86        retcode = process.poll()
+ 87        if retcode:
+ 88            raise CalledProcessError(retcode, process.args)
+ 89
+ 90
+ 91def _default_execution_output_dir(metadata: Metadata) -> pl.Path:
+ 92    filesafe_name = re.sub(r"\W+", "_", metadata.name)
+ 93    return pl.Path(f"output_{filesafe_name}")
+ 94
+ 95
+ 96class DockerRunner(Runner[pl.Path, pl.Path]):
+ 97    def __init__(self, execution_output_dir: Callable[[Metadata], pl.Path] | None = None) -> None:
+ 98        """Create a new DockerRunner.
+ 99
+100        Args:
+101            execution_output_dir: A function that returns the output directory for a given Metadata.
+102                If None, a folder named 'output_<metadata.name>' will be used.
+103                This function is called once before every execution.
+104        """
+105        self.execution_output_dir: Callable[[Metadata], pl.Path] = (
+106            _default_execution_output_dir if execution_output_dir is None else execution_output_dir
+107        )
+108
+109    def start_execution(self, metadata: Metadata) -> Execution[pl.Path, pl.Path]:
+110        output_dir = self.execution_output_dir(metadata)
+111        return DockerExecution(metadata, output_dir)
+
    
+
+
+            
    
+                
    
+                            
+
    
+            
+    class
+    DockerExecution(styx.runners.styxdefs.Execution[pathlib.Path, pathlib.Path]):
+
+                
+
+    
    
+    
+            
    21class DockerExecution(Execution[pl.Path, pl.Path]):
+22    def __init__(self, metadata: Metadata, output_dir: pl.Path) -> None:
+23        self.metadata = metadata
+24        self.input_files: list[tuple[pl.Path, str]] = []
+25        self.input_file_next_id = 0
+26        self.output_files: list[tuple[pl.Path, str]] = []
+27        self.output_file_next_id = 0
+28        self.output_dir = output_dir
+29
+30    def input_file(self, host_file: pl.Path) -> str:
+31        local_file = f"/styx_input/{self.input_file_next_id}/{host_file.name}"
+32        self.input_file_next_id += 1
+33        self.input_files.append((host_file, local_file))
+34        return local_file
+35
+36    def output_file(self, local_file: str, optional: bool = False) -> pl.Path:
+37        return self.output_dir / local_file
+38
+39    def run(self, cargs: list[str]) -> None:
+40        mounts: list[str] = []
+41
+42        for i, (host_file, local_file) in enumerate(self.input_files):
+43            mounts.append("--mount")
+44            mounts.append(_docker_mount(host_file.absolute().as_posix(), local_file, readonly=True))
+45
+46        # Output directory
+47        self.output_dir.mkdir(parents=True, exist_ok=True)
+48
+49        mounts.append("--mount")
+50        mounts.append(_docker_mount(self.output_dir.absolute().as_posix(), "/styx_output", readonly=False))
+51
+52        docker_extra_args: list[str] = []
+53        container = self.metadata.container_image_tag
+54
+55        if container is None:
+56            raise ValueError("No container image tag specified in metadata")
+57
+58        docker_command = [
+59            "docker",
+60            "run",
+61            "--rm",
+62            "-w",
+63            "/styx_output",
+64            *mounts,
+65            "--entrypoint",
+66            "/bin/bash",
+67            *docker_extra_args,
+68            container,
+69            "-l",
+70            "-c",
+71            " ".join(cargs),
+72        ]
+73
+74        print(f"Executing docker command: '{docker_command}'")
+75
+76        def stdout_handler(line: str) -> None:
+77            print(line)
+78
+79        def stderr_handler(line: str) -> None:
+80            print(line)
+81
+82        with Popen(docker_command, text=True, stdout=PIPE, stderr=PIPE) as process:
+83            with ThreadPoolExecutor(2) as pool:  # two threads to handle the streams
+84                exhaust = partial(pool.submit, partial(deque, maxlen=0))
+85                exhaust(stdout_handler(line[:-1]) for line in process.stdout)  # type: ignore
+86                exhaust(stderr_handler(line[:-1]) for line in process.stderr)  # type: ignore
+87        retcode = process.poll()
+88        if retcode:
+89            raise CalledProcessError(retcode, process.args)
+
    
+
+
+            
    Execution object used to execute commands.
    
+
+
    Created by Runner.start_execution().
    
+
    
+
+
+                            
    
+                                        
+
    
+            
+        DockerExecution(metadata: styx.runners.styxdefs.Metadata, output_dir: pathlib.Path)
+
+                
+
+    
    
+    
+            
    22    def __init__(self, metadata: Metadata, output_dir: pl.Path) -> None:
+23        self.metadata = metadata
+24        self.input_files: list[tuple[pl.Path, str]] = []
+25        self.input_file_next_id = 0
+26        self.output_files: list[tuple[pl.Path, str]] = []
+27        self.output_file_next_id = 0
+28        self.output_dir = output_dir
+
    
+
+
+    
+
+                            
    
+                            
    
+                                
    
+            metadata
+
+        
+    
    
+    
+    
+    
+
+                            
    
+                            
    
+                                
    
+            input_files: list[tuple[pathlib.Path, str]]
+
+        
+    
    
+    
+    
+    
+
+                            
    
+                            
    
+                                
    
+            input_file_next_id
+
+        
+    
    
+    
+    
+    
+
+                            
    
+                            
    
+                                
    
+            output_files: list[tuple[pathlib.Path, str]]
+
+        
+    
    
+    
+    
+    
+
+                            
    
+                            
    
+                                
    
+            output_file_next_id
+
+        
+    
    
+    
+    
+    
+
+                            
    
+                            
    
+                                
    
+            output_dir
+
+        
+    
    
+    
+    
+    
+
+                            
    
+                            
    
+                                        
+
    
+            
+        def
+        input_file(self, host_file: pathlib.Path) -> str:
+
+                
+
+    
    
+    
+            
    30    def input_file(self, host_file: pl.Path) -> str:
+31        local_file = f"/styx_input/{self.input_file_next_id}/{host_file.name}"
+32        self.input_file_next_id += 1
+33        self.input_files.append((host_file, local_file))
+34        return local_file
+
    
+
+
+            
    Resolve host input files.
    
+
+
    Returns a local filepath.
+Called (potentially multiple times) after
+Runner.start_execution() and before Runner.run().
    
+
    
+
+
+                            
    
+                            
    
+                                        
+
    
+            
+        def
+        output_file(self, local_file: str, optional: bool = False) -> pathlib.Path:
+
+                
+
+    
    
+    
+            
    36    def output_file(self, local_file: str, optional: bool = False) -> pl.Path:
+37        return self.output_dir / local_file
+
    
+
+
+            
    Resolve local output files.
    
+
+
    Returns a host filepath.
+Called (potentially multiple times) after all
+Runner.input_file() calls.
    
+
    
+
+
+                            
    
+                            
    
+                                        
+
    
+            
+        def
+        run(self, cargs: list[str]) -> None:
+
+                
+
+    
    
+    
+            
    39    def run(self, cargs: list[str]) -> None:
+40        mounts: list[str] = []
+41
+42        for i, (host_file, local_file) in enumerate(self.input_files):
+43            mounts.append("--mount")
+44            mounts.append(_docker_mount(host_file.absolute().as_posix(), local_file, readonly=True))
+45
+46        # Output directory
+47        self.output_dir.mkdir(parents=True, exist_ok=True)
+48
+49        mounts.append("--mount")
+50        mounts.append(_docker_mount(self.output_dir.absolute().as_posix(), "/styx_output", readonly=False))
+51
+52        docker_extra_args: list[str] = []
+53        container = self.metadata.container_image_tag
+54
+55        if container is None:
+56            raise ValueError("No container image tag specified in metadata")
+57
+58        docker_command = [
+59            "docker",
+60            "run",
+61            "--rm",
+62            "-w",
+63            "/styx_output",
+64            *mounts,
+65            "--entrypoint",
+66            "/bin/bash",
+67            *docker_extra_args,
+68            container,
+69            "-l",
+70            "-c",
+71            " ".join(cargs),
+72        ]
+73
+74        print(f"Executing docker command: '{docker_command}'")
+75
+76        def stdout_handler(line: str) -> None:
+77            print(line)
+78
+79        def stderr_handler(line: str) -> None:
+80            print(line)
+81
+82        with Popen(docker_command, text=True, stdout=PIPE, stderr=PIPE) as process:
+83            with ThreadPoolExecutor(2) as pool:  # two threads to handle the streams
+84                exhaust = partial(pool.submit, partial(deque, maxlen=0))
+85                exhaust(stdout_handler(line[:-1]) for line in process.stdout)  # type: ignore
+86                exhaust(stderr_handler(line[:-1]) for line in process.stderr)  # type: ignore
+87        retcode = process.poll()
+88        if retcode:
+89            raise CalledProcessError(retcode, process.args)
+
    
+
+
+            
    Run the command.
    
+
+
    Called after all Execution.input_file()
+and Execution.output_file() calls.
    
+
    
+
+
+                            
    
+                
    
+                
    
+                            
+
    
+            
+    class
+    DockerRunner(styx.runners.styxdefs.Runner[pathlib.Path, pathlib.Path]):
+
+                
+
+    
    
+    
+            
     97class DockerRunner(Runner[pl.Path, pl.Path]):
+ 98    def __init__(self, execution_output_dir: Callable[[Metadata], pl.Path] | None = None) -> None:
+ 99        """Create a new DockerRunner.
+100
+101        Args:
+102            execution_output_dir: A function that returns the output directory for a given Metadata.
+103                If None, a folder named 'output_<metadata.name>' will be used.
+104                This function is called once before every execution.
+105        """
+106        self.execution_output_dir: Callable[[Metadata], pl.Path] = (
+107            _default_execution_output_dir if execution_output_dir is None else execution_output_dir
+108        )
+109
+110    def start_execution(self, metadata: Metadata) -> Execution[pl.Path, pl.Path]:
+111        output_dir = self.execution_output_dir(metadata)
+112        return DockerExecution(metadata, output_dir)
+
    
+
+
+            
    Runner object used to execute commands.
    
+
+
    Possible examples would be LocalRunner,
+DockerRunner, DebugRunner, ...
+Used as a factory for Execution objects.
    
+
    
+
+
+                            
    
+                                        
+
    
+            
+        DockerRunner(	execution_output_dir: Optional[Callable[[styx.runners.styxdefs.Metadata], pathlib.Path]] = None)
+
+                
+
+    
    
+    
+            
     98    def __init__(self, execution_output_dir: Callable[[Metadata], pl.Path] | None = None) -> None:
+ 99        """Create a new DockerRunner.
+100
+101        Args:
+102            execution_output_dir: A function that returns the output directory for a given Metadata.
+103                If None, a folder named 'output_<metadata.name>' will be used.
+104                This function is called once before every execution.
+105        """
+106        self.execution_output_dir: Callable[[Metadata], pl.Path] = (
+107            _default_execution_output_dir if execution_output_dir is None else execution_output_dir
+108        )
+
    
+
+
+            
    Create a new DockerRunner.
    
+
+
    Arguments:
    
+
+
      
+
    • execution_output_dir:  A function that returns the output directory for a given Metadata.
+If None, a folder named 'output_' will be used.
+This function is called once before every execution.
      • 
+
    
+
    
+
+
+                            
    
+                            
    
+                                
    
+            execution_output_dir: Callable[[styx.runners.styxdefs.Metadata], pathlib.Path]
+
+        
+    
    
+    
+    
+    
+
+                            
    
+                            
    
+                                        
+
    
+            
+        def
+        start_execution(	self,	metadata: styx.runners.styxdefs.Metadata) -> styx.runners.styxdefs.Execution[pathlib.Path, pathlib.Path]:
+
+                
+
+    
    
+    
+            
    110    def start_execution(self, metadata: Metadata) -> Execution[pl.Path, pl.Path]:
+111        output_dir = self.execution_output_dir(metadata)
+112        return DockerExecution(metadata, output_dir)
+
    
+
+
+            
    Start an execution.
    
+
+
    Called before any Execution.input_file() calls.
    
+
    
+
+
+                            
    
+                
    
+    
    
+
+
\ No newline at end of file
diff --git a/styx/runners/dummy.html b/styx/runners/dummy.html
index fe5e4df..7f246ed 100644
--- a/styx/runners/dummy.html
+++ b/styx/runners/dummy.html
@@ -45,14 +45,11 @@ 
    API Documentation
    
                         
  • 
                                 input_file
                         
    • 
-                        
  • 
-                                run
-                        
    • 
                         
  • 
                                 output_file
                         
    • 
                         
  • 
-                                finalize
+                                run
                         
    • 
                 
 
@@ -93,14 +90,11 @@ 
    
 13    def input_file(self, host_file: str) -> str:
 14        return host_file
 15
-16    def run(self, cargs: list[str]) -> None:
-17        self.last_cargs = cargs
+16    def output_file(self, local_file: str, optional: bool = False) -> str:
+17        return local_file
 18
-19    def output_file(self, local_file: str, optional: bool = False) -> str:
-20        return local_file
-21
-22    def finalize(self) -> None:
-23        pass
+19    def run(self, cargs: list[str]) -> None:
+20        self.last_cargs = cargs
    @@ -128,14 +122,11 @@

    14 def input_file(self, host_file: str) -> str: 15 return host_file 16 -17 def run(self, cargs: list[str]) -> None: -18 self.last_cargs = cargs +17 def output_file(self, local_file: str, optional: bool = False) -> str: +18 return local_file 19 -20 def output_file(self, local_file: str, optional: bool = False) -> str: -21 return local_file -22 -23 def finalize(self) -> None: -24 pass +20 def run(self, cargs: list[str]) -> None: +21 self.last_cargs = cargs @@ -217,30 +208,6 @@

    - -
    - -
    - - def - run(self, cargs: list[str]) -> None: - - - -
    - - 
    17    def run(self, cargs: list[str]) -> None:
-18        self.last_cargs = cargs
-
    - - -

    Run the command.

    - -

    Called after all Execution.input_file() -calls and before Execution.output_file() calls.

    -
    - -
    @@ -253,39 +220,40 @@

    - 
    20    def output_file(self, local_file: str, optional: bool = False) -> str:
-21        return local_file
+            
    17    def output_file(self, local_file: str, optional: bool = False) -> str:
+18        return local_file
 
    
 
 
             
    Resolve local output files.
    
 
 
    Returns a host filepath.
-Called (potentially multiple times) after
-Runner.run() and before Execution.finalize().
    
+Called (potentially multiple times) after all
+Runner.input_file() calls.
    -
    - +
    +
    def - finalize(self) -> None: + run(self, cargs: list[str]) -> None: - +
    - - 
    23    def finalize(self) -> None:
-24        pass
+    
+            
    20    def run(self, cargs: list[str]) -> None:
+21        self.last_cargs = cargs
 
    
 
 
-            
    Finalize the execution.
    
+            
    Run the command.
    
 
-
    Called after all Execution.output_file() calls.
    
+
    Called after all Execution.input_file()
+and Execution.output_file() calls.
    
 
    
 
 
diff --git a/styx/runners/local.html b/styx/runners/local.html
deleted file mode 100644
index ffb5a72..0000000
--- a/styx/runners/local.html
+++ /dev/null
@@ -1,233 +0,0 @@
-
-
-
-    
-    
-    
-    styx.runners.local API documentation
-
-    
-    
-    
-    
-    
-    
-
-    
-    
    
-            
    
-                    
    
-styx.runners.local    
    
-
-                
-                
-                
-                
-            
    
-    
    
-
-
\ No newline at end of file
diff --git a/styx/runners/styxdefs.html b/styx/runners/styxdefs.html
index 106481d..e76cb0b 100644
--- a/styx/runners/styxdefs.html
+++ b/styx/runners/styxdefs.html
@@ -51,9 +51,6 @@ 
    API Documentation
    
                         
  • 
                                 output_file
                         
    • 
-                        
  • 
-                                finalize
-                        
    • 
                 
 
             
@@ -144,7 +141,7 @@ 
    
 25        """Run the command.
 26
 27        Called after all `Execution.input_file()`
-28        calls and before `Execution.output_file()` calls.
+28        and `Execution.output_file()` calls.
 29        """
 30        ...
 31
@@ -152,54 +149,47 @@ 
    
 33        """Resolve local output files.
 34
 35        Returns a host filepath.
-36        Called (potentially multiple times) after
-37        `Runner.run()` and before `Execution.finalize()`.
+36        Called (potentially multiple times) after all
+37        `Runner.input_file()` calls.
 38        """
 39        ...
 40
-41    def finalize(self) -> None:
-42        """Finalize the execution.
-43
-44        Called after all `Execution.output_file()` calls.
-45        """
-46        ...
-47
+41
+42class Metadata(typing.NamedTuple):
+43    """Static tool metadata.
+44
+45    This is structured static metadata that is known at compile time.
+46    Runners can use this to set up execution environments.
+47    """
 48
-49class Metadata(typing.NamedTuple):
-50    """Static tool metadata.
-51
-52    This is structured static metadata that is known at compile time.
-53    Runners can use this to set up execution environments.
-54    """
-55
-56    id: str
-57    """Unique identifier of the tool."""
-58    name: str
-59    """Name of the tool."""
-60    container_image_type: str | None = None
-61    """Type of container image. Example: docker, singularity."""
-62    container_image_tag: str | None = None
-63    """Name of an image where the tool is installed and configured. Example: bids/mriqc."""
-64    container_image_index: str | None = None
-65    """Optional index where the image is available, if not the standard location. Example: docker.io"""
-66    container_image_opts: str | None = None
-67    """Container-level arguments for the application. Example: --privileged"""
-68
-69
-70class Runner(typing.Protocol[P, R]):
-71    """Runner object used to execute commands.
-72
-73    Possible examples would be `LocalRunner`,
-74    `DockerRunner`, `DebugRunner`, ...
-75    Used as a factory for `Execution` objects.
-76    """
-77
-78    def start_execution(self, metadata: Metadata) -> Execution[P, R]:
-79        """Start an execution.
-80
-81        Called before any `Execution.input_file()` calls.
-82        """
-83        ...
+49    id: str
+50    """Unique identifier of the tool."""
+51    name: str
+52    """Name of the tool."""
+53    container_image_type: str | None = None
+54    """Type of container image. Example: docker, singularity."""
+55    container_image_tag: str | None = None
+56    """Name of an image where the tool is installed and configured. Example: bids/mriqc."""
+57    container_image_index: str | None = None
+58    """Optional index where the image is available, if not the standard location. Example: docker.io"""
+59    container_image_opts: str | None = None
+60    """Container-level arguments for the application. Example: --privileged"""
+61
+62
+63class Runner(typing.Protocol[P, R]):
+64    """Runner object used to execute commands.
+65
+66    Possible examples would be `LocalRunner`,
+67    `DockerRunner`, `DebugRunner`, ...
+68    Used as a factory for `Execution` objects.
+69    """
+70
+71    def start_execution(self, metadata: Metadata) -> Execution[P, R]:
+72        """Start an execution.
+73
+74        Called before any `Execution.input_file()` calls.
+75        """
+76        ...
    @@ -262,7 +252,7 @@

    26 """Run the command. 27 28 Called after all `Execution.input_file()` -29 calls and before `Execution.output_file()` calls. +29 and `Execution.output_file()` calls. 30 """ 31 ... 32 @@ -270,17 +260,10 @@

    34 """Resolve local output files. 35 36 Returns a host filepath. -37 Called (potentially multiple times) after -38 `Runner.run()` and before `Execution.finalize()`. +37 Called (potentially multiple times) after all +38 `Runner.input_file()` calls. 39 """ 40 ... -41 -42 def finalize(self) -> None: -43 """Finalize the execution. -44 -45 Called after all `Execution.output_file()` calls. -46 """ -47 ...

    @@ -379,7 +362,7 @@

    26 """Run the command. 27 28 Called after all `Execution.input_file()` -29 calls and before `Execution.output_file()` calls. +29 and `Execution.output_file()` calls. 30 """ 31 ...

    @@ -388,7 +371,7 @@

    Run the command.

    Called after all Execution.input_file() -calls and before Execution.output_file() calls.

    +and Execution.output_file() calls.

    @@ -408,8 +391,8 @@

    34 """Resolve local output files. 35 36 Returns a host filepath. -37 Called (potentially multiple times) after -38 `Runner.run()` and before `Execution.finalize()`. +37 Called (potentially multiple times) after all +38 `Runner.input_file()` calls. 39 """ 40 ... @@ -418,35 +401,8 @@

    Resolve local output files.

    Returns a host filepath. -Called (potentially multiple times) after -Runner.run() and before Execution.finalize().

    -
    - - - -
    - -
    - - def - finalize(self) -> None: - - - -
    - - 
    42    def finalize(self) -> None:
-43        """Finalize the execution.
-44
-45        Called after all `Execution.output_file()` calls.
-46        """
-47        ...
-
    - - -

    Finalize the execution.

    - -

    Called after all Execution.output_file() calls.

    +Called (potentially multiple times) after all +Runner.input_file() calls.

    @@ -463,25 +419,25 @@

    - 
    50class Metadata(typing.NamedTuple):
-51    """Static tool metadata.
-52
-53    This is structured static metadata that is known at compile time.
-54    Runners can use this to set up execution environments.
-55    """
-56
-57    id: str
-58    """Unique identifier of the tool."""
-59    name: str
-60    """Name of the tool."""
-61    container_image_type: str | None = None
-62    """Type of container image. Example: docker, singularity."""
-63    container_image_tag: str | None = None
-64    """Name of an image where the tool is installed and configured. Example: bids/mriqc."""
-65    container_image_index: str | None = None
-66    """Optional index where the image is available, if not the standard location. Example: docker.io"""
-67    container_image_opts: str | None = None
-68    """Container-level arguments for the application. Example: --privileged"""
+            
    43class Metadata(typing.NamedTuple):
+44    """Static tool metadata.
+45
+46    This is structured static metadata that is known at compile time.
+47    Runners can use this to set up execution environments.
+48    """
+49
+50    id: str
+51    """Unique identifier of the tool."""
+52    name: str
+53    """Name of the tool."""
+54    container_image_type: str | None = None
+55    """Type of container image. Example: docker, singularity."""
+56    container_image_tag: str | None = None
+57    """Name of an image where the tool is installed and configured. Example: bids/mriqc."""
+58    container_image_index: str | None = None
+59    """Optional index where the image is available, if not the standard location. Example: docker.io"""
+60    container_image_opts: str | None = None
+61    """Container-level arguments for the application. Example: --privileged"""
 
    
 
 
@@ -606,20 +562,20 @@ 
    Inherited Members
    - 
    71class Runner(typing.Protocol[P, R]):
-72    """Runner object used to execute commands.
-73
-74    Possible examples would be `LocalRunner`,
-75    `DockerRunner`, `DebugRunner`, ...
-76    Used as a factory for `Execution` objects.
-77    """
-78
-79    def start_execution(self, metadata: Metadata) -> Execution[P, R]:
-80        """Start an execution.
-81
-82        Called before any `Execution.input_file()` calls.
-83        """
-84        ...
+            
    64class Runner(typing.Protocol[P, R]):
+65    """Runner object used to execute commands.
+66
+67    Possible examples would be `LocalRunner`,
+68    `DockerRunner`, `DebugRunner`, ...
+69    Used as a factory for `Execution` objects.
+70    """
+71
+72    def start_execution(self, metadata: Metadata) -> Execution[P, R]:
+73        """Start an execution.
+74
+75        Called before any `Execution.input_file()` calls.
+76        """
+77        ...
 
    
 
 
@@ -685,12 +641,12 @@ 
    Inherited Members
    - 
    79    def start_execution(self, metadata: Metadata) -> Execution[P, R]:
-80        """Start an execution.
-81
-82        Called before any `Execution.input_file()` calls.
-83        """
-84        ...
+            
    72    def start_execution(self, metadata: Metadata) -> Execution[P, R]:
+73        """Start an execution.
+74
+75        Called before any `Execution.input_file()` calls.
+76        """
+77        ...