forked from hdmf-dev/hdmf-zarr
-
Notifications
You must be signed in to change notification settings - Fork 0
184 lines (170 loc) · 10.4 KB
/
run_all_tests.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
name: Run all tests
on:
schedule:
- cron: '0 5 * * *' # once per day at midnight ET
push:
tags: # run only on new tags that follow semver
- '/^[0-9]+(\.[0-9]+)?(\.[0-9]+)?$/'
workflow_dispatch:
jobs:
run-all-tests:
# the only differences between this job and "run_tests.yml" is the "strategy.matrix.include" and the upload
# distributions step.
# GitHub Actions does not yet support YAML anchors, easily reusable components, or easy dynamic matrix
# configurations based on the github event, so this job is duplicated for the most part
name: ${{ matrix.name }}
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash
strategy:
fail-fast: false
matrix:
include:
- { name: linux-python3.8-minimum , test-tox-env: py38-minimum , build-tox-env: build-py38-minimum , python-ver: "3.8" , os: ubuntu-latest }
- { name: linux-python3.9 , test-tox-env: py39 , build-tox-env: build-py39 , python-ver: "3.9" , os: ubuntu-latest }
- { name: linux-python3.10 , test-tox-env: py310 , build-tox-env: build-py310 , python-ver: "3.10", os: ubuntu-latest }
- { name: linux-python3.11 , test-tox-env: py311 , build-tox-env: build-py311 , python-ver: "3.11", os: ubuntu-latest }
- { name: linux-python3.12 , test-tox-env: py312 , build-tox-env: build-py312 , python-ver: "3.12", os: ubuntu-latest }
- { name: linux-python3.12-optional , test-tox-env: py312-optional , build-tox-env: build-py312-optional , python-ver: "3.12", os: ubuntu-latest }
- { name: linux-python3.12-upgraded , test-tox-env: py312-upgraded , build-tox-env: build-py312-upgraded , python-ver: "3.12", os: ubuntu-latest }
- { name: linux-python3.12-prerelease , test-tox-env: py312-prerelease, build-tox-env: build-py312-prerelease, python-ver: "3.12", os: ubuntu-latest }
- { name: windows-python3.8-minimum , test-tox-env: py38-minimum , build-tox-env: build-py38-minimum , python-ver: "3.8" , os: windows-latest }
- { name: windows-python3.9 , test-tox-env: py39 , build-tox-env: build-py39 , python-ver: "3.9" , os: windows-latest }
- { name: windows-python3.10 , test-tox-env: py310 , build-tox-env: build-py310 , python-ver: "3.10", os: windows-latest }
- { name: windows-python3.11 , test-tox-env: py311 , build-tox-env: build-py311 , python-ver: "3.11", os: windows-latest }
- { name: windows-python3.12 , test-tox-env: py312 , build-tox-env: build-py312 , python-ver: "3.12", os: windows-latest }
- { name: windows-python3.12-optional , test-tox-env: py312-optional , build-tox-env: build-py312-optional , python-ver: "3.12", os: windows-latest }
- { name: windows-python3.12-upgraded , test-tox-env: py312-upgraded , build-tox-env: build-py312-upgraded , python-ver: "3.12", os: windows-latest }
- { name: windows-python3.12-prerelease, test-tox-env: py312-prerelease, build-tox-env: build-py312-prerelease, python-ver: "3.12", os: windows-latest }
- { name: macos-python3.8-minimum , test-tox-env: py38-minimum , build-tox-env: build-py38-minimum , python-ver: "3.8" , os: macos-latest }
- { name: macos-python3.9 , test-tox-env: py39 , build-tox-env: build-py39 , python-ver: "3.9" , os: macos-latest }
- { name: macos-python3.10 , test-tox-env: py310 , build-tox-env: build-py310 , python-ver: "3.10", os: macos-latest }
- { name: macos-python3.11 , test-tox-env: py311 , build-tox-env: build-py311 , python-ver: "3.11", os: macos-latest }
- { name: macos-python3.12 , test-tox-env: py312 , build-tox-env: build-py312 , python-ver: "3.12", os: macos-latest }
- { name: macos-python3.12-optional , test-tox-env: py312-optional , build-tox-env: build-py312-optional , python-ver: "3.12", os: macos-latest }
- { name: macos-python3.12-upgraded , test-tox-env: py312-upgraded , build-tox-env: build-py312-upgraded , python-ver: "3.12", os: macos-latest }
- { name: macos-python3.12-prerelease , test-tox-env: py312-prerelease, build-tox-env: build-py312-prerelease, python-ver: "3.12", os: macos-latest }
steps:
- name: Cancel non-latest runs
uses: styfle/[email protected]
with:
all_but_latest: true
access_token: ${{ github.token }}
- uses: actions/checkout@v4
with:
submodules: 'recursive'
fetch-depth: 0 # tags are required for versioneer to determine the version
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-ver }}
- name: Install build dependencies
run: |
python -m pip install --upgrade pip
python -m pip install tox
python -m pip list
- name: Run tox tests
run: |
tox -e ${{ matrix.test-tox-env }}
- name: Build wheel and source distribution
run: |
tox -e ${{ matrix.build-tox-env }}
ls -1 dist
- name: Test installation from a wheel
run: |
tox -e wheelinstall --recreate --installpkg dist/*-none-any.whl
run-all-gallery-tests:
name: ${{ matrix.name }}
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash
strategy:
fail-fast: false
matrix:
include:
- { name: linux-gallery-python3.8-minimum , test-tox-env: gallery-py38-minimum , python-ver: "3.8" , os: ubuntu-latest }
- { name: linux-gallery-python3.12-upgraded , test-tox-env: gallery-py312-upgraded , python-ver: "3.12", os: ubuntu-latest }
- { name: linux-gallery-python3.12-prerelease , test-tox-env: gallery-py312-prerelease, python-ver: "3.12", os: ubuntu-latest }
- { name: windows-gallery-python3.8-minimum , test-tox-env: gallery-py38-minimum , python-ver: "3.8" , os: windows-latest }
- { name: windows-gallery-python3.12-upgraded , test-tox-env: gallery-py312-upgraded , python-ver: "3.12", os: windows-latest }
- { name: windows-gallery-python3.12-prerelease, test-tox-env: gallery-py312-prerelease, python-ver: "3.12", os: windows-latest }
- { name: macos-gallery-python3.8-minimum , test-tox-env: gallery-py38-minimum , python-ver: "3.8" , os: macos-latest }
- { name: macos-gallery-python3.12-upgraded , test-tox-env: gallery-py312-upgraded , python-ver: "3.12", os: macos-latest }
- { name: macos-gallery-python3.12-prerelease , test-tox-env: gallery-py312-prerelease, python-ver: "3.12", os: macos-latest }
steps:
- name: Cancel non-latest runs
uses: styfle/[email protected]
with:
all_but_latest: true
access_token: ${{ github.token }}
- uses: actions/checkout@v4
with:
submodules: 'recursive'
fetch-depth: 0 # tags are required for versioneer to determine the version
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-ver }}
- name: Install build dependencies
run: |
python -m pip install --upgrade pip
python -m pip install tox
python -m pip list
- name: Run tox tests
run: |
tox -e ${{ matrix.test-tox-env }}
run-all-tests-on-conda:
name: ${{ matrix.name }}
runs-on: ubuntu-latest
defaults:
run:
shell: bash -l {0} # needed for conda environment to work
strategy:
fail-fast: false
matrix:
include:
- { name: conda-linux-python3.8-minimum , test-tox-env: py38-minimum , build-tox-env: build-py38-minimum , python-ver: "3.8" , os: ubuntu-latest }
- { name: conda-linux-python3.9 , test-tox-env: py39 , build-tox-env: build-py39 , python-ver: "3.9" , os: ubuntu-latest }
- { name: conda-linux-python3.10 , test-tox-env: py310 , build-tox-env: build-py310 , python-ver: "3.10", os: ubuntu-latest }
- { name: conda-linux-python3.11 , test-tox-env: py311 , build-tox-env: build-py311 , python-ver: "3.11", os: ubuntu-latest }
- { name: conda-linux-python3.12 , test-tox-env: py312 , build-tox-env: build-py312 , python-ver: "3.12", os: ubuntu-latest }
- { name: conda-linux-python3.12-optional , test-tox-env: py312-optional , build-tox-env: build-py312-optional , python-ver: "3.12", os: ubuntu-latest }
- { name: conda-linux-python3.12-upgraded , test-tox-env: py312-upgraded , build-tox-env: build-py312-upgraded , python-ver: "3.12", os: ubuntu-latest }
- { name: conda-linux-python3.12-prerelease, test-tox-env: py312-prerelease, build-tox-env: build-py312-prerelease, python-ver: "3.12", os: ubuntu-latest }
steps:
- name: Cancel non-latest runs
uses: styfle/[email protected]
with:
all_but_latest: true
access_token: ${{ github.token }}
- uses: actions/checkout@v4
with:
submodules: 'recursive'
fetch-depth: 0 # tags are required for versioneer to determine the version
- name: Set up Conda
uses: conda-incubator/setup-miniconda@v2
with:
auto-update-conda: true
python-version: ${{ matrix.python-ver }}
- name: Install build dependencies
run: |
conda config --set always_yes yes --set changeps1 no
conda info
conda install -c conda-forge tox
- name: Conda reporting
run: |
conda info
conda config --show-sources
conda list --show-channel-urls
- name: Run tox tests
run: |
tox -e ${{ matrix.test-tox-env }}
- name: Build wheel and source distribution
run: |
tox -e ${{ matrix.build-tox-env }}
ls -1 dist
- name: Test installation from a wheel
run: |
tox -e wheelinstall --recreate --installpkg dist/*-none-any.whl