diff --git a/CHANGELOG.md b/CHANGELOG.md index 49d1947c6..3c6b1d7f2 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,3 +1,6 @@ +# Release 0.20.3 +- [WM-2560] Update WDL version of GDCWholeGenomeSomaticSingleSample to 1.3.1 ([#632](https://github.com/broadinstitute/wfl/pull/632)) + # Release 0.20.2 - [GH-1695] Fix the "increment BAM version in Clio" again. ([#626](https://github.com/broadinstitute/wfl/pull/626)) diff --git a/api/src/wfl/module/sg.clj b/api/src/wfl/module/sg.clj index e6bf3f329..03653f8a6 100644 --- a/api/src/wfl/module/sg.clj +++ b/api/src/wfl/module/sg.clj @@ -31,7 +31,7 @@ ::all/input_cram])) (def workflow-wdl "The top-level WDL file and its version." - {:release "GDCWholeGenomeSomaticSingleSample_v1.3.0" + {:release "GDCWholeGenomeSomaticSingleSample_v1.3.1" :path "pipelines/broad/dna_seq/somatic/single_sample/wgs/gdc_genome/GDCWholeGenomeSomaticSingleSample.wdl"}) (defn ^:private cromwell->strings diff --git a/api/test/resources/datasets/illumina-genotyping-array.json b/api/test/resources/datasets/illumina-genotyping-array.json index 6fe5899dc..e7d45a0e8 100644 --- a/api/test/resources/datasets/illumina-genotyping-array.json +++ b/api/test/resources/datasets/illumina-genotyping-array.json @@ -125,5 +125,6 @@ } } ] - } + }, + "dedicatedIngestServiceAccount": false } diff --git a/api/test/resources/datasets/testing-dataset.json b/api/test/resources/datasets/testing-dataset.json index 7c34dc2ab..7f0fb3746 100644 --- a/api/test/resources/datasets/testing-dataset.json +++ b/api/test/resources/datasets/testing-dataset.json @@ -50,5 +50,6 @@ } } ] - } + }, + "dedicatedIngestServiceAccount": false } diff --git a/api/test/wfl/integration/firecloud_test.clj b/api/test/wfl/integration/firecloud_test.clj index 36577b680..cebae1826 100644 --- a/api/test/wfl/integration/firecloud_test.clj +++ b/api/test/wfl/integration/firecloud_test.clj @@ -17,8 +17,10 @@ (def entity-set-type (str (first entity) "_set")) ;; A manually-triggered submission and its workflow -(def submission-id "454df415-e349-4929-b8e2-4f56661f0446") -(def workflow-id "1e7eb23c-88e9-44a4-878f-b08b75112384") +;; (If this gets archived, a new copy can be resubmitted at +;; https://app.terra.bio/#workspaces/wfl-dev/Illumina-Genotyping-Array/workflows/warp-pipelines/IlluminaGenotypingArray) +(def submission-id "ffdf72b0-6014-4f18-9c35-18eab21ac049") +(def workflow-id "1a1c8089-9d84-4d85-b104-2be5092a3604") (deftest test-get-submission (let [submission (firecloud/get-submission workspace submission-id)] diff --git a/version b/version index 727d97b9b..144996ed2 100644 --- a/version +++ b/version @@ -1 +1 @@ -0.20.2 +0.20.3