diff --git a/requirements.txt b/requirements.txt index 1d9fc63..3903995 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,2 +1,2 @@ requests -cas-tools==0.0.1.dev42 +cas-tools==0.0.1.dev44 diff --git a/setup.py b/setup.py index b3e94e6..0e0868c 100644 --- a/setup.py +++ b/setup.py @@ -8,7 +8,7 @@ setup( name="tdta", - version="0.1.0.dev12", + version="0.1.0.dev13", description="The aim of this project is to provide taxonomy development tools custom actions.", long_description=README, long_description_content_type="text/markdown", diff --git a/src/tdta/tdt_export.py b/src/tdta/tdt_export.py index e1d090f..1f9ca6e 100644 --- a/src/tdta/tdt_export.py +++ b/src/tdta/tdt_export.py @@ -24,7 +24,7 @@ def export_cas_data(sqlite_db: str, output_file: str, dataset_cache_folder: str :param output_file: output json path :param dataset_cache_folder: anndata cache folder path """ - cta = CellTypeAnnotation("", list()) + cta = CellTypeAnnotation("", list(), "") cas_tables = get_table_names(sqlite_db) for table_name in cas_tables: