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[feature] Add local sequence-logo drawer for meme seqs #200

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Kiri2002 opened this issue Sep 27, 2023 · 1 comment
Open

[feature] Add local sequence-logo drawer for meme seqs #200

Kiri2002 opened this issue Sep 27, 2023 · 1 comment

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@Kiri2002
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Kiri2002 commented Sep 27, 2023

according to doc

If we have internet access, we can create a weblogo:
m.weblogo("mymotif.png")
We should get our logo saved as a PNG in the specified file.

biopython use web to draw logo. But now there are many good local drawer in python, for example:

pyseqlogo
image

Logomaker, it's paper
image

so maybe we can pick some merge to biopython? Benefit a lot .

@peterjc
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peterjc commented Sep 27, 2023

Perhaps easier to add examples using these to our documentation, or even add an alternative method to our motif code to call these libraries?

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