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  1. speciesprimer speciesprimer Public

    The SpeciesPrimer pipeline is intended to help researchers finding specific primer pairs for the detection and quantification of bacterial species in complex ecosystems.

    Python 40 19

  2. MFEprimer-py3 MFEprimer-py3 Public

    Forked from Ulises-Rosas/MFEprimer-py3

    python3 version of MFEprimer-2.0

    Python 1

  3. speciesprimerdeps speciesprimerdeps Public

    Dependencies for Docker baseimage for SpeciesPrimer

    Dockerfile 1

  4. htqpcr_validation_data htqpcr_validation_data Public

    Jupyter Notebook

  5. metacal metacal Public

    Forked from mikemc/metacal

    Metagenomics calibration R package

    R

  6. htqpcr_ngs_data htqpcr_ngs_data Public

    Raw data and code for data analysis of the manuscript: "High-throughput qPCR and 16S rRNA gene amplicon sequencing as complementary methods for the investigation of the cheese microbiota."

    Jupyter Notebook