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sortsequences.py issue #182

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sdewell opened this issue May 21, 2018 · 1 comment

sdewell commented May 21, 2018

Sibelia run as:

-s loose -m 50000

on bacterial assembly, output is fine.

Running sortsqequences.py in output folder (with circos folder inside) gives:

chromosome [block_00] not in karyotype file at /usr/local/bin/circos-tools-0.22/tools/orderchr/bin/orderchr line 871, line 17.

thank you!

Member

iminkin commented May 24, 2018

Hi, can you share the output?

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