{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":113202317,"defaultBranch":"master","name":"phylogenetics","ownerLogin":"biocaml","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2017-12-05T15:54:02.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/1847144?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1720434843.0","currentOid":""},"activityList":{"items":[{"before":"50309eaacba3d8140e6ce6f02fa49e13d4b89c23","after":"2bb7db8374b13b80ad8e7ac79f0911a9c312c9ce","ref":"refs/heads/master","pushedAt":"2024-07-09T10:50:25.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"dune-project: added Corentin in author list","shortMessageHtmlLink":"dune-project: added Corentin in author list"}},{"before":"1836a7cedd6e1d2f530425f7f7ab143a2fc50f40","after":"50309eaacba3d8140e6ce6f02fa49e13d4b89c23","ref":"refs/heads/master","pushedAt":"2024-07-08T10:30:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"boring update of regression tests","shortMessageHtmlLink":"boring update of regression tests"}},{"before":"ae74bf740402158e9481a1df8559c0e974c5b9cf","after":"1836a7cedd6e1d2f530425f7f7ab143a2fc50f40","ref":"refs/heads/master","pushedAt":"2024-07-08T10:19:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"updated changes","shortMessageHtmlLink":"updated changes"}},{"before":"785b77ec543cc0cbd00a5583017fde3371a922d1","after":"ae74bf740402158e9481a1df8559c0e974c5b9cf","ref":"refs/heads/master","pushedAt":"2024-07-08T10:18:51.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"Massive documentation effort by Corentin\n\nThis commit adds a lot of documentation in mli files based on a\nproposal by Corentin Moumard. A big thanks to him for his patient\nreading of the whole code base!","shortMessageHtmlLink":"Massive documentation effort by Corentin"}},{"before":"d67c662d6c8d5c0b3410e463e6403d857e9ea51e","after":"785b77ec543cc0cbd00a5583017fde3371a922d1","ref":"refs/heads/master","pushedAt":"2024-07-08T10:06:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"Massive documentation effort by Corentin\n\nThis commit adds a lot of documentation in mli files based on a\nproposal by Corentin Moumard. A big thanks to him for his patient\nreading of the whole code base!","shortMessageHtmlLink":"Massive documentation effort by Corentin"}},{"before":"a9e322d1c175dd9174f720d79544b2e6b3f1e2f7","after":"d67c662d6c8d5c0b3410e463e6403d857e9ea51e","ref":"refs/heads/master","pushedAt":"2024-07-02T13:12:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"TKF91: fixed indexation called by simulation","shortMessageHtmlLink":"TKF91: fixed indexation called by simulation"}},{"before":"566bd0cf5c4561f3e096872313e1f490e99531c6","after":"a9e322d1c175dd9174f720d79544b2e6b3f1e2f7","ref":"refs/heads/master","pushedAt":"2024-04-29T07:39:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"MG94: expose stationary_distribution","shortMessageHtmlLink":"MG94: expose stationary_distribution"}},{"before":"3cb1c74c01ac932a24657829171afd63462529ec","after":"566bd0cf5c4561f3e096872313e1f490e99531c6","ref":"refs/heads/master","pushedAt":"2024-04-26T21:16:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"new MG94 model","shortMessageHtmlLink":"new MG94 model"}},{"before":"9062e1b9836ca6d311af2db5f22d854b2d07b8c4","after":"3cb1c74c01ac932a24657829171afd63462529ec","ref":"refs/heads/master","pushedAt":"2024-03-12T10:47:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"update wrt core 0.16","shortMessageHtmlLink":"update wrt core 0.16"}},{"before":"f5c6a3ca3d5d5620d54c6e9feba793323b8e37f5","after":"9062e1b9836ca6d311af2db5f22d854b2d07b8c4","ref":"refs/heads/master","pushedAt":"2024-03-12T07:15:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"Tree: added map_branches","shortMessageHtmlLink":"Tree: added map_branches"}},{"before":"704ddddeb22e65160b5dca0a003578eb2866f37b","after":"f5c6a3ca3d5d5620d54c6e9feba793323b8e37f5","ref":"refs/heads/master","pushedAt":"2024-03-07T08:43:33.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"Phylo_ctmc.SV: added add and scal_vec_mul","shortMessageHtmlLink":"Phylo_ctmc.SV: added add and scal_vec_mul"}},{"before":"b87fe329306a44159bed93b0e4ed258a9c7bd281","after":"704ddddeb22e65160b5dca0a003578eb2866f37b","ref":"refs/heads/master","pushedAt":"2024-03-03T09:30:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"expect test for phylo CTMC conditional simulation","shortMessageHtmlLink":"expect test for phylo CTMC conditional simulation"}},{"before":"2f40087b1157647d904272e4d052ce25b035f320","after":"b87fe329306a44159bed93b0e4ed258a9c7bd281","ref":"refs/heads/master","pushedAt":"2024-03-02T09:54:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"Rate_matrix: changed signature of gtr","shortMessageHtmlLink":"Rate_matrix: changed signature of gtr"}},{"before":"aee2ddac6aa388452450eb0f745124e9faf9dbb8","after":"2f40087b1157647d904272e4d052ce25b035f320","ref":"refs/heads/master","pushedAt":"2024-02-23T21:27:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"Phylo_ctmc: expose shift vector operations","shortMessageHtmlLink":"Phylo_ctmc: expose shift vector operations"}},{"before":"0b14b9993cecb043848d86a1b30fb1c24e030993","after":"aee2ddac6aa388452450eb0f745124e9faf9dbb8","ref":"refs/heads/master","pushedAt":"2023-08-04T08:41:45.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"lsdch","name":"Louis Duchemin","path":"/lsdch","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17616580?s=80&v=4"},"commit":{"message":"Merge Fasta and Phylip parsing error types in `Alignment` module","shortMessageHtmlLink":"Merge Fasta and Phylip parsing error types in Alignment module"}},{"before":"285c63eca37cf9970b62d39e292305e4a9806d21","after":"fb6414cad1daaf25b44b41bee7252c56ac97b7db","ref":"refs/heads/phylip-utils","pushedAt":"2023-08-04T08:30:37.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"lsdch","name":"Louis Duchemin","path":"/lsdch","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17616580?s=80&v=4"},"commit":{"message":"Merge Fasta and Phylip parsing error types in `Alignment` module","shortMessageHtmlLink":"Merge Fasta and Phylip parsing error types in Alignment module"}},{"before":"0d06d9ec9015de52a70cacc3101044ea435c22d8","after":"285c63eca37cf9970b62d39e292305e4a9806d21","ref":"refs/heads/phylip-utils","pushedAt":"2023-08-03T09:36:37.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lsdch","name":"Louis Duchemin","path":"/lsdch","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17616580?s=80&v=4"},"commit":{"message":"Implement conversion functions between `Alignment.t` and `Phylip.t`","shortMessageHtmlLink":"Implement conversion functions between Alignment.t and Phylip.t"}},{"before":null,"after":"0d06d9ec9015de52a70cacc3101044ea435c22d8","ref":"refs/heads/phylip-utils","pushedAt":"2023-08-03T09:24:42.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"lsdch","name":"Louis Duchemin","path":"/lsdch","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17616580?s=80&v=4"},"commit":{"message":"Implement conversion functions between `Alignment.t` and `Phylip.t`","shortMessageHtmlLink":"Implement conversion functions between Alignment.t and Phylip.t"}},{"before":"ea7fe359fe12787179a991c99e5ad3daca8e462b","after":"0b14b9993cecb043848d86a1b30fb1c24e030993","ref":"refs/heads/master","pushedAt":"2023-08-03T09:09:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lsdch","name":"Louis Duchemin","path":"/lsdch","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17616580?s=80&v=4"},"commit":{"message":"Fix deprecated calls to `Wag.parse`","shortMessageHtmlLink":"Fix deprecated calls to Wag.parse"}},{"before":"14ee9f2b89ae7d1e001f8af4ece0c0a6cec7fbac","after":"ea7fe359fe12787179a991c99e5ad3daca8e462b","ref":"refs/heads/master","pushedAt":"2023-06-24T16:18:37.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"Merge branch 'better-doc'","shortMessageHtmlLink":"Merge branch 'better-doc'"}},{"before":"68889f0516ec1902320339d68704e25b70f14710","after":"14ee9f2b89ae7d1e001f8af4ece0c0a6cec7fbac","ref":"refs/heads/master","pushedAt":"2023-05-05T10:53:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"updated Changes","shortMessageHtmlLink":"updated Changes"}},{"before":"7f18d2e7f379d4cb1ee448ac39eb45f68eb1f2b9","after":"68889f0516ec1902320339d68704e25b70f14710","ref":"refs/heads/master","pushedAt":"2023-05-05T10:44:35.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"dune lang version update","shortMessageHtmlLink":"dune lang version update"}},{"before":"40f35acd8211e9a47044c0f7de0d8f655d7b872a","after":"7f18d2e7f379d4cb1ee448ac39eb45f68eb1f2b9","ref":"refs/heads/master","pushedAt":"2023-05-05T07:17:57.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"fixed missing dune dep for test","shortMessageHtmlLink":"fixed missing dune dep for test"}},{"before":"7d724dcde2b41de89e0da73a15ba3a327927a242","after":"40f35acd8211e9a47044c0f7de0d8f655d7b872a","ref":"refs/heads/master","pushedAt":"2023-04-09T21:35:41.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"lsdch","name":"Louis Duchemin","path":"/lsdch","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17616580?s=80&v=4"},"commit":{"message":"Adds `sexp` derivations for Tree.t and related types","shortMessageHtmlLink":"Adds sexp derivations for Tree.t and related types"}},{"before":"5c7972f4f7261286114f7f68f206a1fa86fbd61e","after":"d4aa3e43ee423a0c9e91b3c85125854dd24ca777","ref":"refs/heads/sexp-deriving","pushedAt":"2023-04-09T17:50:04.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lsdch","name":"Louis Duchemin","path":"/lsdch","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17616580?s=80&v=4"},"commit":{"message":"Adds `sexp` derivations for Tree.t and related types","shortMessageHtmlLink":"Adds sexp derivations for Tree.t and related types"}},{"before":null,"after":"5c7972f4f7261286114f7f68f206a1fa86fbd61e","ref":"refs/heads/sexp-deriving","pushedAt":"2023-04-09T17:48:24.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"lsdch","name":"Louis Duchemin","path":"/lsdch","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17616580?s=80&v=4"},"commit":{"message":"Adds `sexp` derivations for Annotated_tree types","shortMessageHtmlLink":"Adds sexp derivations for Annotated_tree types"}},{"before":"56c47d1eb802eb44620f8896fef31ca303c013cd","after":"7d724dcde2b41de89e0da73a15ba3a327927a242","ref":"refs/heads/master","pushedAt":"2023-04-09T17:46:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lsdch","name":"Louis Duchemin","path":"/lsdch","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17616580?s=80&v=4"},"commit":{"message":"Update .gitignore","shortMessageHtmlLink":"Update .gitignore"}},{"before":"d237ca24e8d17fd12996b5aa4ebffef81260b54d","after":"56c47d1eb802eb44620f8896fef31ca303c013cd","ref":"refs/heads/master","pushedAt":"2023-03-09T15:52:24.592Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"pveber","name":"pveber","path":"/pveber","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/341342?s=80&v=4"},"commit":{"message":"Add a test case for `Tree.leafset_generated_subtree`\n\nThis clarifies that a result is expected,\neven when some leaves in the set were not found in the tree","shortMessageHtmlLink":"Add a test case for Tree.leafset_generated_subtree"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNy0wOVQxMDo1MDoyNS4wMDAwMDBazwAAAAR6jdzG","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNy0wOVQxMDo1MDoyNS4wMDAwMDBazwAAAAR6jdzG","endCursor":"Y3Vyc29yOnYyOpK7MjAyMy0wMy0wOVQxNTo1MjoyNC41OTI0MjBazwAAAAMABUj7"}},"title":"Activity ยท biocaml/phylogenetics"}