From 705eaf68d1c438f6d3bb3d30c27e811393ec05fe Mon Sep 17 00:00:00 2001
From: bnguyen-bcgsc <bnguyen@bcgsc.ca>
Date: Tue, 2 Apr 2024 12:04:58 -0700
Subject: [PATCH] - Add mutation burden back to genomic summary and rapid
 summary so old reports still display existing values - Remove redundant state
 property of totalMutationPerMb in tumour summary edit now that Mutation
 Burden is not editable anymore - DEVSU-2239

---
 app/components/TumourSummaryEdit/index.tsx               | 1 -
 app/views/ReportView/components/GenomicSummary/index.tsx | 4 ++++
 app/views/ReportView/components/RapidSummary/index.tsx   | 4 ++++
 3 files changed, 8 insertions(+), 1 deletion(-)

diff --git a/app/components/TumourSummaryEdit/index.tsx b/app/components/TumourSummaryEdit/index.tsx
index 335b94831..e03dd36e4 100644
--- a/app/components/TumourSummaryEdit/index.tsx
+++ b/app/components/TumourSummaryEdit/index.tsx
@@ -95,7 +95,6 @@ const TumourSummaryEdit = ({
     if (mutationBurden) {
       setNewMutationBurdenData({
         role: mutationBurden.role,
-        totalMutationsPerMb: mutationBurden.totalMutationsPerMb,
         qualitySvCount: mutationBurden.qualitySvCount,
         qualitySvPercentile: mutationBurden.qualitySvPercentile,
       });
diff --git a/app/views/ReportView/components/GenomicSummary/index.tsx b/app/views/ReportView/components/GenomicSummary/index.tsx
index 6f30f980e..a856eb6d6 100644
--- a/app/views/ReportView/components/GenomicSummary/index.tsx
+++ b/app/views/ReportView/components/GenomicSummary/index.tsx
@@ -319,6 +319,10 @@ const GenomicSummary = ({
           value: sigs,
           action: !isPrint ? () => history.push('mutation-signatures') : null,
         },
+        {
+          term: 'Mutation Burden',
+          value: primaryBurden && primaryBurden.totalMutationsPerMb !== null && (!tmburMutBur?.adjustedTmb || tmburMutBur.tmbHidden === true) ? `${primaryBurden.totalMutationsPerMb} Mut/Mb` : null,
+        },
         {
           term: `SV Burden (${primaryComparator ? primaryComparator.name : 'primary'})`,
           value: svBurden,
diff --git a/app/views/ReportView/components/RapidSummary/index.tsx b/app/views/ReportView/components/RapidSummary/index.tsx
index 2ed5d5e91..4646b7923 100644
--- a/app/views/ReportView/components/RapidSummary/index.tsx
+++ b/app/views/ReportView/components/RapidSummary/index.tsx
@@ -346,6 +346,10 @@ const RapidSummary = ({
           ? `${tCellCd8.score} ${tCellCd8.percentile ? `(${tCellCd8.percentile}%)` : ''}`
           : null,
       },
+      {
+        term: 'Mutation Burden',
+        value: primaryBurden && primaryBurden.totalMutationsPerMb !== null && (!tmburMutBur?.adjustedTmb || tmburMutBur.tmbHidden === true) ? `${primaryBurden.totalMutationsPerMb} Mut/Mb` : null,
+      },
       {
         term: 'SV Burden (POG Average)',
         value: svBurden,