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For indexlr python wrapper, allow passing sequences in memory #49

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lcoombe opened this issue Mar 4, 2022 · 0 comments
Open

For indexlr python wrapper, allow passing sequences in memory #49

lcoombe opened this issue Mar 4, 2022 · 0 comments
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enhancement New feature or request

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@lcoombe
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lcoombe commented Mar 4, 2022

Currently, to compute minimizers with the python wrapper for indexlr, the sequences need to be in a file on disk. Ideally (if possible), there would also be an option to pass sequences (ex. list of instances of the Record class) directly to the code. This would just avoid writing temp files when wanting to compute minimizers for sequences on the fly.

@lcoombe lcoombe added the enhancement New feature or request label Mar 4, 2022
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