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Log likelihood computation in numpyro can be extremely slow #2373

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OriolAbril opened this issue Aug 28, 2024 · 3 comments · May be fixed by #2390
Open

Log likelihood computation in numpyro can be extremely slow #2373

OriolAbril opened this issue Aug 28, 2024 · 3 comments · May be fixed by #2390

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@OriolAbril
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See #2367 for example. We should look into what makes it be slow and try to fix it, it would also be nice to add a progressbar so it is less surprising when things get stuck or freeze.

@aporsch1
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I think I'd like to work on this. I'll look at your guidelines and take a crack at it.

@OriolAbril
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Thanks! That would be greatly appreciated. I myself am not very familiar with numpyro but will do my best to help if I can

@aporsch1
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Great. We aren't parallelizing at all here, is there any downside to doing that? We could include batch size as a parameter or something like that which could lead to a decent size speedup, I think. I will also look more at numpyro to see if I can get more performance gains there.

@OriolAbril OriolAbril linked a pull request Oct 7, 2024 that will close this issue
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2 participants