Skip to content

Issues: artic-network/rampart

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

28 Open 57 Closed
28 Open 57 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

rampart with dorado's .fastq
#117 opened Sep 18, 2024 by doloacu
1
Be able to provide a barcode to sample name mapping from a CSV/TSV file enhancement New feature or request
#115 opened Sep 25, 2023 by rambaut
File watching doesn't work in Windows Subsystem for Linux bug Something isn't working
#114 opened Sep 25, 2023 by rambaut
Multiples genomes
#113 opened May 31, 2023 by SergioBuenestadoSerrano
1
System limit for number of file watchers reached when using millions of reads
#90 opened May 20, 2021 by jagos01
1
Add custom_barcodes to the annotationOptions config choices
#88 opened Mar 8, 2021 by JudoWill
1
how to translate from locations on the genomes in the VCF to the mutation in aa?
#87 opened Mar 8, 2021 by dinavb
Feature request: add extra charts with read information using seqkit
#84 opened Jan 11, 2021 by rmcolq
Scale 'unassigned' barcode bar to be per sample enhancement New feature or request
#76 opened Apr 3, 2020 by rambaut v1.1.1
1
Include a coverage heat-map above amplicon graphic for each sample enhancement New feature or request
#75 opened Apr 3, 2020 by rambaut v1.1.1
Show coverage plot in summary panel enhancement New feature or request
#74 opened Apr 3, 2020 by rambaut v1.1.1
Improve read lengths histogram x-axis domain enhancement New feature or request
#71 opened Apr 1, 2020 by jameshadfield
Export Reads fails when there are unprocessed FASTQs on disk bug Something isn't working
#70 opened Apr 1, 2020 by jameshadfield
Show coverage % in barchart at top enhancement New feature or request
#67 opened Mar 28, 2020 by rambaut V1.1
Reference heatmap needs improvement with light theme
#62 opened Feb 12, 2020 by jameshadfield
Keep the reference colours consistent between runs and/or have some control over reference colour. enhancement New feature or request
#56 opened Jan 14, 2020 by aineniamh
@rambaut
6
Improve documentation of config args to post processing scripts enhancement New feature or request
#55 opened Jan 12, 2020 by aineniamh
2
Panel in UI to show currently running processing scripts enhancement New feature or request high priority
#54 opened Jan 9, 2020 by rambaut V1.1
@jameshadfield
2
Amplicon caller in annotation script enhancement New feature or request
#50 opened Dec 18, 2019 by rambaut v2.0
Responsive design for iPads/Phones/MinION Mk1C etc touchscreen enhancement New feature or request
#49 opened Dec 18, 2019 by rambaut v2.0
Jump to sample if you click on a sample name enhancement New feature or request
#48 opened Dec 12, 2019 by rambaut v2.0
1
Generate reports as PDF or similar enhancement New feature or request high priority
#47 opened Nov 26, 2019 by rambaut v2.0
Don't show coverage by reference if only one reference bug Something isn't working
#46 opened Nov 26, 2019 by rambaut v1.0
Optional reading of .bed files enhancement New feature or request
#43 opened Aug 27, 2019 by rambaut v2.0
Artifactual peak in read length histogram bug Something isn't working low priority
#39 opened Jul 25, 2019 by rambaut v1.0
1
ProTip! What’s not been updated in a month: updated:<2024-09-20.