generated from ansforge/IG-modele
-
Notifications
You must be signed in to change notification settings - Fork 0
206 lines (144 loc) · 8.04 KB
/
build-ig.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
name: Build IG
on:
schedule:
- cron: '00 4,10,15 * * *'
workflow_call:
workflow_dispatch:
# The following jobs are equal for all IGs and can be moved to a common composite-action if 'uses'-support is added, see:
# https://github.com/actions/runner/blob/main/docs/adrs/1144-composite-actions.md
jobs:
publish:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
#- uses: actions/setup-java@v3
# with:
# distribution: 'oracle'
# java-version: '17'
- name: Setup Python # Set Python version
uses: actions/setup-python@v4
with:
python-version: '3.10'
- name: Install saxon
run : pip install saxonche
- name: Install rename
run : sudo apt install rename
- name: Get From site esante
run: |
#Creation des répertoires d'init
#mkdir ./input/images/NOS/
mkdir ./input/NOS
#Recuperation des NOS en json
wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics-Versions_json_fhir.zip
unzip NOS-Fichiers_Publics-Versions_json_fhir.zip -d ./input/NOS
#Suppression des fichiers en erreur
rm ./input/NOS/TRE_R13-Commune-FHIR.json
rm ./input/NOS/ASS_X12-CommuneDeptRegionOM-FHIR.json
rm ./input/NOS/JDV_J120-CommuneHistorisee-FHIR.json
rm ./input/NOS/JDV_J124-Commune-FHIR.json
rm ./input/NOS/ASS_A11-CorresModeleCDA-XdsFormatCode-CISIS-FHIR.json
rm ./input/NOS/ASS_X16-CorrespondanceType-Classe-DMP-FHIR.json
rm ./input/NOS/JDV_J151-BodySiteBodyTemperature-ENS-FHIR.json
rm ./input/NOS/ASS_*
# Downloads the newest version of the IG Publisher, this could probable be cached.
- name: 📥 Download IG Publisher
run: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar
- name: Install modules
run: npm install -g fsh-sushi
- name: Build and test with Rake
run: |
sudo apt-get install ruby-full
sudo gem install jekyll
- name: Run sushi
run: sushi .
# Builds the HTML page for the IG.
- name: 🏃♂️ Run IG Publisher
run : java -Xmx8192m -jar publisher.jar publisher -ig . -publish https://github.io/
- name: Setup Python # Set Python version
uses: actions/setup-python@v4
with:
python-version: '3.10'
- name: Get From site esante
run: |
#Recuperation des fichier .json
wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics-Versions_json_fhir.zip
cp NOS-Fichiers_Publics-Versions_json_fhir.zip ./output/NOS
unzip NOS-Fichiers_Publics-Versions_json_fhir.zip -d ./output/NOS
#Recucperation des fichiers .tabs
wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics.zip
cp NOS-Fichiers_Publics.zip ./output/NOS/
unzip NOS-Fichiers_Publics.zip -d ./output/NOS
#Recupération des fichiers SVS
wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics-Versions_xml_svs.zip
cp NOS-Fichiers_Publics-Versions_xml_svs.zip ./output/NOS
unzip NOS-Fichiers_Publics-Versions_xml_svs.zip -d ./output/NOS
#Recupération des fichiers xml Fhir
wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/nos-fichiers_publics-versions_xml_fhir.zip
cp nos-fichiers_publics-versions_xml_fhir.zip ./output/NOS
unzip nos-fichiers_publics-versions_xml_fhir.zip -d ./output/NOS
#Recuperation des fichiers PDF
wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics_JDV-Versions_pdf.zip
cp NOS-Fichiers_Publics_JDV-Versions_pdf.zip ./output/NOS
unzip NOS-Fichiers_Publics_JDV-Versions_pdf.zip -d ./output/NOS
wget -q https://esante.gouv.fr/sites/default/files/media_entity/documents/NOS-Fichiers_Publics_TRE_ASS-Versions_pdf.zip
cp NOS-Fichiers_Publics_TRE_ASS-Versions_pdf.zip ./output/NOS
unzip NOS-Fichiers_Publics_TRE_ASS-Versions_pdf.zip -d ./output/NOS
- name: Rename TRE
run : rename -v 's/TRE_/CodeSystem-TRE-/' ./output/NOS
- name: Rename JDV
run : rename -v 's/JDV_/ValueSet-JDV-/' ./output/NOS
#- name: Run script python
# run: python ./tools/transform.py './output' './tools/xsl'
- name: 1 ZIP JDV PDF
run : zip -rj ./output/NOS/NOS-jdv-pdf.zip ./output/NOS/JDV_*.pdf
- name: 1 ZIP JDV SVS
run : zip -rj ./output/NOS/NOS-jdv-svs.zip ./output/NOS/JDV_*.xml -x "*FHIR*"
- name: 1 ZIP JDV FHIR JSON
run : zip -rj ./output/NOS/NOS-jdv-fhir-json.zip ./output/NOS/JDV_*-FHIR.json
- name: 1 ZIP JDV FHIR XML
run : zip -rj ./output/NOS/NOS-jdv-fhir-xml.zip ./output/NOS/JDV_*-FHIR.xml
- name: 1 ZIP JDV FHIR tabs
run : zip -rj ./output/NOS/NOS-jdv-tabs.zip ./output/NOS/JDV_*.tabs
- name: 2 ZIP TRE PDF
run : zip -rj ./output/NOS/NOS-tre-pdf.zip ./output/NOS/TRE_*.pdf
- name: 2 ZIP TRE SVS
run : zip -rj ./output/NOS/NOS-tre-svs.zip ./output/NOS/TRE*.xml -x "*FHIR*"
- name: 2 ZIP TRE FHIR JSON
run : zip -rj ./output/NOS/NOS-tre-fhir-json.zip ./output/NOS/TRE*-FHIR.json
- name: 2 ZIP TRE FHIR XML
run : zip -rj ./output/NOS/NOS-tre-fhir-xml.zip ./output/NOS/TRE*-FHIR.xml
- name: 2 ZIP TRE FHIR tabs
run : zip -rj ./output/NOS/NOS-tre-tabs.zip ./output/NOS/TRE*.tabs
- name: 3 ZIP ASS PDF
run : zip -rj ./output/NOS/NOS-ass-pdf.zip ./output/NOS/ASS_*.pdf
- name: 3 ZIP ASS SVS
run : zip -rj ./output/NOS/NOS-ass-svs.zip ./output/NOS/ASS*.xml -x "*FHIR*"
- name: 3 ZIP ASS FHIR JSON
run : zip -rj ./output/NOS/NOS-ass-fhir-json.zip ./output/NOS/ASS*-FHIR.json
- name: 3 ZIP ASS FHIR XML
run : zip -rj ./output/NOS/NOS-ass-fhir-xml.zip ./output/NOS/ASS*-FHIR.xml
- name: 3 ZIP ASS FHIR tabs
run : zip -rj ./output/NOS/NOS-ass-tabs.zip ./output/NOS/ASS*.tabs
- name: ZIP Ensemble des NOS au format CSV
run : zip -rj ./output/NOS/NOS-Fichiers_Publics.zip ./output/NOS/*.tabs
- name: ZIP Ensemble des NOS au format XML/SVS
run : zip -rj ./output/NOS/NOS-Fichiers_Publics-Versions_xml_svs.zip ./output/NOS/*.xml -x "*FHIR*"
- name: ZIP Ensemble des NOS au format JSON/FHIR (ZIP)
run : zip -rj ./output/NOS/NOS-Fichiers_Publics-Versions_json_fhir.zip ./output/NOS/*-FHIR.json
#- name: ZIP Ensemble des NOS au format XML/FHIR (ZIP)
# run : zip -rj ./output/NOS/Nos-fichiers_publics-versions_xml_fhir.zip ./output/NOS/*-FHIR.xml
- name: ZIP Jeux de valeurs du CI-SIS (ZIP
run : zip -rj ./output/NOS/NOS-Jeux_de_Valeurs_CI-SIS.zip ./output/NOS/*CISIS*
- name: Get branch names
id: branch-name
uses: tj-actions/[email protected]
# Publishes the HTML page to a seperate branch in order to host it using GitHub-Pages.
# This will overwrite the currently published HTML page.
- name: 🚀 Deploy to GitHub-Pages
uses: peaceiris/actions-gh-pages@v3
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
publish_dir: ./output
exclude_assets: '**ig.zip.zip,**CodeSystem-TRE-R13-CommuneOM.xml.html**'
destination_dir: ig/${{ steps.branch-name.outputs.current_branch }}
commit_message: ' ${{ github.event.head_commit.message }}'