Scripts are from P454 peptide study, part of CyaA protein:

-Depth insertion : mesure of distance between COM of the peptide and COM of the membrane , and statistical analysis

-center_protein.ipynb : prepare files for membrane curvature studies

-MDA_membrane_curvature.ipynb : use of MDAnalysis to generate membrane curvatures 2D maps

-generate_restraints.py : used for the parametrization of the flat bottom potential