diff --git a/molecule/default/verify.yml b/molecule/default/verify.yml index ee5cb9a..7d8926d 100644 --- a/molecule/default/verify.yml +++ b/molecule/default/verify.yml @@ -26,6 +26,17 @@ - name: Display SequenceServer service logs debug: msg: "{{ log.content | b64decode }}" + - name: Get the SequenceServer configuration file of my_db + slurp: + src: "/etc/sequenceserver/config/sequenceserver.my_db.conf" + register: my_db_conf + - name: Display content of the SequenceServer configuration file of my_db + debug: + msg: "{{ my_db_conf.content | b64decode }}" + - name: Check that conf_option is in the SequenceServer configuration file of my_db + set_fact: + grep_slurm_batch: "{{ my_db_conf.content | b64decode | regex_findall('databases_widget') | first }}" + failed_when: grep_slurm_batch != 'databases_widget' - name: Test that SequenceServer service is running for my_db systemd: name: sequenceserver-my_db.service @@ -83,14 +94,3 @@ set_fact: grep_slurm_batch: "{{ lib_modified_for_hpc_integration.content | b64decode | regex_findall('slurm_sbatch.sh') | first }}" failed_when: grep_slurm_batch != 'slurm_sbatch.sh' - - name: Get the SequenceServer configuration file of my_db - slurp: - src: "/etc/sequenceserver/config/sequenceserver.my_db.conf" - register: my_db_conf - - name: Display content of the SequenceServer configuration file of my_db - debug: - msg: "{{ my_db_conf.content | b64decode }}" - - name: Check that conf_option is in the SequenceServer configuration file of my_db - set_fact: - grep_slurm_batch: "{{ my_db_conf.content | b64decode | regex_findall('databases_widget') | first }}" - failed_when: grep_slurm_batch != 'databases_widget'