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Use this package with Seurat? #276

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jcasadogp opened this issue May 24, 2024 · 1 comment
Open

Use this package with Seurat? #276

jcasadogp opened this issue May 24, 2024 · 1 comment

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@jcasadogp
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Hi!

I have seen a very interesting reading using enrichplot in Visualization of functional enrichment result and I wanted to ask if there is a way of applying these codes to a Seurat object.

In concrete, from a Seurat object, I usually get DF of genes and pathways differentially expressed between conditions with columns like "PValue", "FDR", "NES", "logFC", ... and I wanted to use the plots of enrichplot package, but I haven't found the way

Thank you in advance!

Julia

@GuangchuangYu
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You need to specify your needs. I have no idea of what you want to get.

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