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Question regard annotatepeaks #211

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Lattesnow opened this issue Nov 29, 2022 · 0 comments
Open

Question regard annotatepeaks #211

Lattesnow opened this issue Nov 29, 2022 · 0 comments

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@Lattesnow
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Hey,
I found some discrepancies between the results from annotatepeaks-ChIPseeker and results from chippeakanno. When we use annotatepeaks in ChIPseeker, is it possible the results given a gene that are not overlapped with the peak? Cause I saw some distal intergenic annotations. I am wondering how could the software tell if the gene is really regulated by this distal intergenic peak?
Thanks
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@Lattesnow