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ui.R
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#
# This is the user-interface definition of ContDataSumViz Shiny web application. You can
# run the application by clicking 'Run App' above.
#
# Find out more about building applications with Shiny here:
#
# http://shiny.rstudio.com/
#
## Moved to Global ***
# library(shiny)
# library(shinyjs)
# library(shinyalert)
# library(shinythemes)
# library(shinydashboard)
# library(ggplot2)
# library(ggthemes)
# library(DT)
# library(plotly)
# #library(shinycustomloader)
# library(shinycssloaders)
app_jscode <-
"shinyjs.disableTab = function(name) {
var tab = $('.nav li a[data-value=' + name + ']');
$(tab).css({'visibility' : 'hidden' })
// $(tab).hide();
}
shinyjs.enableTab = function(name) {
var tab = $('.nav li a[data-value=' + name + ']');
$(tab).css({'visibility' : 'visible' })
// $(tab).show();
}"
# Define UI for application
options(spinner.color.background = "#ffffff", spinner.size = 1)
shinyUI(fluidPage(
tags$html(class = "no-js", lang="en"),
tags$head(
HTML(
"<!-- Google Tag Manager -->
<script>(function(w,d,s,l,i){w[l]=w[l]||[];w[l].push({'gtm.start':
new Date().getTime(),event:'gtm.js'});var f=d.getElementsByTagName(s)[0],
j=d.createElement(s),dl=l!='dataLayer'?'&l='+l:'';j.async=true;j.src=
'https://www.googletagmanager.com/gtm.js?id='+i+dl;f.parentNode.insertBefore(j,f);
})(window,document,'script','dataLayer','GTM-L8ZB');</script>
<!-- End Google Tag Manager -->
"
),
tags$meta(charset="utf-8"),
tags$meta(property="og:site_name", content="US EPA"),
#tags$link(rel = "stylesheet", type = "text/css", href = "css/uswds.css"),
tags$link(rel = "stylesheet", type = "text/css", href = "https://cdnjs.cloudflare.com/ajax/libs/uswds/3.0.0-beta.3/css/uswds.min.css", integrity="sha512-ZKvR1/R8Sgyx96aq5htbFKX84hN+zNXN73sG1dEHQTASpNA8Pc53vTbPsEKTXTZn9J4G7R5Il012VNsDEReqCA==", crossorigin="anonymous", referrerpolicy="no-referrer"),
tags$meta(property="og:url", content="https://www.epa.gov/themes/epa_theme/pattern-lab/.markup-only.html"),
tags$link(rel="canonical", href="https://www.epa.gov/themes/epa_theme/pattern-lab/.markup-only.html"),
tags$link(rel="shortlink", href="https://www.epa.gov/themes/epa_theme/pattern-lab/.markup-only.html"),
tags$meta(property="og:url", content="https://www.epa.gov/themes/epa_theme/pattern-lab/.markup-only.html"),
tags$meta(property="og:image", content="https://www.epa.gov/sites/all/themes/epa/img/epa-standard-og.jpg"),
tags$meta(property="og:image:width", content="1200"),
tags$meta(property="og:image:height", content="630"),
tags$meta(property="og:image:alt", content="U.S. Environmental Protection Agency"),
tags$meta(name="twitter:card", content="summary_large_image"),
tags$meta(name="twitter:image:alt", content="U.S. Environmental Protection Agency"),
tags$meta(name="twitter:image:height", content="600"),
tags$meta(name="twitter:image:width", content="1200"),
tags$meta(name="twitter:image", content="https://www.epa.gov/sites/all/themes/epa/img/epa-standard-twitter.jpg"),
tags$meta(name="MobileOptimized", content="width"),
tags$meta(name="HandheldFriendly", content="true"),
tags$meta(name="viewport", content="width=device-width, initial-scale=1.0"),
tags$meta(`http-equiv`="x-ua-compatible", content="ie=edge"),
tags$script(src = "js/pattern-lab-head-script.js"),
# update this line with your title:
tags$title('ContDataSumViz | US EPA'),
tags$link(rel="icon", type="image/x-icon", href="https://www.epa.gov/themes/epa_theme/images/favicon.ico"),
tags$meta(name="msapplication-TileColor", content="#FFFFFF"),
tags$meta(name="msapplication-TileImage", content="https://www.epa.gov/themes/epa_theme/images/favicon-144.png"),
tags$meta(name="application-name", content=""),
tags$meta(name="msapplication-config", content="https://www.epa.gov/themes/epa_theme/images/ieconfig.xml"),
tags$link(rel="apple-touch-icon-precomposed", sizes="196x196", href="https://www.epa.gov/themes/epa_theme/images/favicon-196.png"),
tags$link(rel="apple-touch-icon-precomposed", sizes="152x152", href="https://www.epa.gov/themes/epa_theme/images/favicon-152.png"),
tags$link(rel="apple-touch-icon-precomposed", sizes="144x144", href="https://www.epa.gov/themes/epa_theme/images/favicon-144.png"),
tags$link(rel="apple-touch-icon-precomposed", sizes="120x120", href="https://www.epa.gov/themes/epa_theme/images/favicon-120.png"),
tags$link(rel="apple-touch-icon-precomposed", sizes="114x114", href="https://www.epa.gov/themes/epa_theme/images/favicon-114.png"),
tags$link(rel="apple-touch-icon-precomposed", sizes="72x72", href="https://www.epa.gov/themes/epa_theme/images/favicon-72.png"),
tags$link(rel="apple-touch-icon-precomposed", href="https://www.epa.gov/themes/epa_theme/images/favicon-180.png"),
tags$link(rel="icon", href="https://www.epa.gov/themes/epa_theme/images/favicon-32.png", sizes="32x32"),
tags$link(rel="preload", href="https://www.epa.gov/themes/epa_theme/fonts/source-sans-pro/sourcesanspro-regular-webfont.woff2", as="font", crossorigin="anonymous"),
tags$link(rel="preload", href="https://www.epa.gov/themes/epa_theme/fonts/source-sans-pro/sourcesanspro-bold-webfont.woff2", as="font", crossorigin="anonymous"),
tags$link(rel="preload", href="https://www.epa.gov/themes/epa_theme/fonts/merriweather/Latin-Merriweather-Bold.woff2", as="font", crossorigin="anonymous"),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/core/themes/stable/css/system/components/ajax-progress.module.css?r6lsex"),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/core/themes/stable/css/system/components/autocomplete-loading.module.css?r6lsex" ),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/core/themes/stable/css/system/components/js.module.css?r6lsex"),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/core/themes/stable/css/system/components/sticky-header.module.css?r6lsex"),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/core/themes/stable/css/system/components/system-status-counter.css?r6lsex"),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/core/themes/stable/css/system/components/system-status-report-counters.css?r6lsex"),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/core/themes/stable/css/system/components/system-status-report-general-info.css?r6lsex"),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/core/themes/stable/css/system/components/tabledrag.module.css?r6lsex"),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/core/themes/stable/css/system/components/tablesort.module.css?r6lsex"),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/core/themes/stable/css/system/components/tree-child.module.css?r6lsex"),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/themes/epa_theme/css/styles.css?r6lsex"),
tags$link(rel="stylesheet", media="all", href="https://www.epa.gov/themes/epa_theme/css-lib/colorbox.min.css?r6lsex"),
tags$script(src = 'https://cdnjs.cloudflare.com/ajax/libs/uswds/3.0.0-beta.3/js/uswds-init.min.js'),
#fix container-fluid that boostrap RShiny uses
tags$style(HTML(
'.container-fluid {
padding-right: 0;
padding-left: 0;
margin-right: 0;
margin-left: 0;
}
.tab-content {
margin-right: 30px;
margin-left: 30px;
}'
))
),
tags$body(
class="path-themes not-front has-wide-template", id="top",
tags$script(
src = 'https://cdnjs.cloudflare.com/ajax/libs/uswds/3.0.0-beta.3/js/uswds.min.js'
)
),
# Site Header
HTML(
'<div class="skiplinks" role="navigation" aria-labelledby="skip-to-main">
<a id="skip-to-main" href="#main" class="skiplinks__link visually-hidden focusable">Skip to main content</a>
</div>
<!-- Google Tag Manager (noscript) -->
<noscript><iframe src=https://www.googletagmanager.com/ns.html?id=GTM-L8ZB
height="0" width="0" style="display:none;visibility:hidden"></iframe></noscript>
<!-- End Google Tag Manager (noscript) -->
<div class="dialog-off-canvas-main-canvas" data-off-canvas-main-canvas>
<section class="usa-banner" aria-label="Official government website">
<div class="usa-accordion">
<header class="usa-banner__header">
<div class="usa-banner__inner">
<div class="grid-col-auto">
<img class="usa-banner__header-flag" src="https://www.epa.gov/themes/epa_theme/images/us_flag_small.png" alt="U.S. flag" />
</div>
<div class="grid-col-fill tablet:grid-col-auto">
<p class="usa-banner__header-text">An official website of the United States government</p>
<p class="usa-banner__header-action" aria-hidden="true">Here’s how you know</p>
</div>
<button class="usa-accordion__button usa-banner__button" aria-expanded="false" aria-controls="gov-banner">
<span class="usa-banner__button-text">Here’s how you know</span>
</button>
</div>
</header>
<div class="usa-banner__content usa-accordion__content" id="gov-banner">
<div class="grid-row grid-gap-lg">
<div class="usa-banner__guidance tablet:grid-col-6">
<img class="usa-banner__icon usa-media-block__img" src="https://www.epa.gov/themes/epa_theme/images/icon-dot-gov.svg" alt="Dot gov">
<div class="usa-media-block__body">
<p>
<strong>Official websites use .gov</strong>
<br> A <strong>.gov</strong> website belongs to an official government organization in the United States.
</p>
</div>
</div>
<div class="usa-banner__guidance tablet:grid-col-6">
<img class="usa-banner__icon usa-media-block__img" src="https://www.epa.gov/themes/epa_theme/images/icon-https.svg" alt="HTTPS">
<div class="usa-media-block__body">
<p>
<strong>Secure .gov websites use HTTPS</strong>
<br> A <strong>lock</strong> (<span class="icon-lock"><svg xmlns="http://www.w3.org/2000/svg" width="52" height="64" viewBox="0 0 52 64" class="usa-banner__lock-image" role="img" aria-labelledby="banner-lock-title banner-lock-description"><title id="banner-lock-title">Lock</title><desc id="banner-lock-description">A locked padlock</desc><path fill="#000000" fill-rule="evenodd" d="M26 0c10.493 0 19 8.507 19 19v9h3a4 4 0 0 1 4 4v28a4 4 0 0 1-4 4H4a4 4 0 0 1-4-4V32a4 4 0 0 1 4-4h3v-9C7 8.507 15.507 0 26 0zm0 8c-5.979 0-10.843 4.77-10.996 10.712L15 19v9h22v-9c0-6.075-4.925-11-11-11z"/></svg></span>) or <strong>https://</strong> means you’ve safely connected to the .gov website. Share sensitive information only on official, secure websites.
</p>
</div>
</div>
</div>
</div>
</div>
</section>
<div>
<div class="js-view-dom-id-epa-alerts--public">
<noscript>
<div class="usa-site-alert usa-site-alert--info">
<div class="usa-alert">
<div class="usa-alert__body">
<div class="usa-alert__text">
<p>JavaScript appears to be disabled on this computer. Please <a href="/alerts">click here to see any active alerts</a>.</p>
</div>
</div>
</div>
</div>
</noscript>
</div>
</div>
<header class="l-header">
<div class="usa-overlay"></div>
<div class="l-constrain">
<div class="l-header__navbar">
<div class="l-header__branding">
<a class="site-logo" href="/" aria-label="Home" title="Home" rel="home">
<span class="site-logo__image">
<svg class="site-logo__svg" viewBox="0 0 1061 147" aria-hidden="true" xmlns="http://www.w3.org/2000/svg">
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.3-3 .6s-1.9.8-2.6 1.5c-.8.7-1.2 1.7-1.2 3 0 .4.1.8.2 1.3s.4 1 .8 1.5.9.8 1.6 1.1c.7.3 1.5.5 2.5.5 2.3 0 4.1-.9 5.2-2.7.5-.8.8-1.7 1-2.7.1-.9.2-2.2.2-4zM800.7 50.9h4.6V87h-4.6zM828.4 50.8h11.7c2.1 0 3.9.1 5.5.4.8.2 1.5.4 2.2.9.7.4 1.3.9 1.8 1.6 1.7 1.9 2.6 4.2 2.6 7 0 2.7-.9 5.1-2.8 7.1-.8.9-2 1.7-3.6 2.2-1.6.6-3.9.9-6.9.9h-5.7V87h-4.8V50.8m4.8 15.9h5.8c.8 0 1.7-.1 2.6-.2.9-.1 1.8-.3 2.6-.7.8-.4 1.5-1 2-1.9.5-.8.8-2 .8-3.4s-.2-2.5-.7-3.3c-.5-.8-1.1-1.3-1.9-1.7-1.6-.5-3.1-.8-4.5-.7h-6.8v11.9zM858.1 67c0-1.8-.1-3.5-.3-5.1h4.6l.1 4.9c.5-1.8 1.4-3 2.5-3.7 1.1-.7 2.2-1.2 3.3-1.3 1.4-.2 2.4-.2 3.1-.1v4.6c-.2-.1-.5-.2-.9-.2h-1.3c-1.3 0-2.4.2-3.3.5-.9.4-1.5.9-2 1.6-.9 1.4-1.4 3.2-1.3 5.4v13.3H858V67zM875.5 74.7c0-1.6.2-3.2.6-4.8.4-1.6 1.1-3 2-4.4 1-1.3 2.2-2.4 3.8-3.2 1.6-.8 3.6-1.2 5.9-1.2 2.4 0 4.5.4 6.1 1.3 1.5.9 2.7 2 3.6 3.3.9 1.3 1.5 2.8 1.8 4.3.2.8.3 1.5.4 2.2v2.2c0 3.7-1 6.9-3 9.5-2 2.6-5.1 4-9.3 4-4-.1-7-1.4-9-3.9-1.9-2.5-2.9-5.6-2.9-9.3m4.8-.3c0 2.7.6 5 1.8 6.9 1.2 2 3 3 5.6 3.1.9 0 1.8-.2 2.7-.5.8-.3 1.6-.9 2.3-1.7.7-.8 1.3-1.9 1.8-3.2.4-1.3.6-2.9.6-4.7-.1-6.4-2.5-9.6-7.1-9.6-.7 0-1.5.1-2.4.3-.8.3-1.7.8-2.5 1.6-.8.7-1.4 1.7-1.9 3-.7 1.1-.9 2.8-.9 4.8zM904.1 61.7h4.3v-5.2l4.5-1.5v6.8h5.4v3.4h-5.4v15.1c0 .3 0 .6.1 1 0 .4.1.7.4 1.1.2.4.5.6 1 .8.4.3 1 .4 1.8.4 1 0 1.7-.1 2.2-.2V87c-.9.2-2.1.3-3.8.3-2.1 0-3.6-.4-4.6-1.2-1-.8-1.5-2.2-1.5-4.2V65.1h-4.3v-3.4zM927.2 75.2c-.1 2.6.5 4.8 1.7 6.5 1.1 1.7 2.9 2.6 5.3 2.6 1.5 0 2.8-.4 3.9-1.3 1-.8 1.6-2.2 1.8-4h4.6c0 .6-.2 1.4-.4 2.3-.3 1-.8 2-1.7 3-.2.3-.6.6-1 1-.5.4-1 .7-1.7 1.1-.7.4-1.5.6-2.4.8-.9.3-2 .4-3.3.4-7.6-.2-11.3-4.5-11.3-12.9 0-2.5.3-4.8 1-6.8s2-3.7 3.8-5.1c1.2-.8 2.4-1.3 3.7-1.6 1.3-.2 2.2-.3 3-.3 2.7 0 4.8.6 6.3 1.6s2.5 2.3 3.1 3.9c.6 1.5 1 3.1 1.1 4.6.1 1.6.1 2.9 0 4h-17.5m12.9-3v-1.1c0-.4 0-.8-.1-1.2-.1-.9-.4-1.7-.8-2.5s-1-1.5-1.8-2c-.9-.5-2-.8-3.4-.8-.8 0-1.5.1-2.3.3-.8.2-1.5.7-2.2 1.3-.7.6-1.2 1.3-1.6 2.3-.4 1-.7 2.2-.8 3.6h13zM966.1 69.8c0-.3 0-.8-.1-1.4-.1-.6-.3-1.1-.6-1.8-.2-.6-.7-1.2-1.4-1.6-.7-.4-1.6-.6-2.7-.6-1.5 0-2.7.4-3.5 1.2-.9.8-1.5 1.7-1.9 2.8-.4 1.1-.6 2.2-.7 3.2-.1 1.1-.2 1.8-.1 2.4 0 1.3.1 2.5.3 3.7.2 1.2.5 2.3.9 3.3.8 2 2.4 3 4.8 3.1 1.9 0 3.3-.7 4.1-1.9.8-1.1 1.2-2.3 1.2-3.6h4.6c-.2 2.5-1.1 4.6-2.7 6.3-1.7 1.8-4.1 2.7-7.1 2.7-.9 0-2.1-.2-3.6-.6-.7-.2-1.4-.6-2.2-1-.8-.4-1.5-1-2.2-1.7-.7-.9-1.4-2.1-2-3.6-.6-1.5-.9-3.5-.9-6.1 0-2.6.4-4.8 1.1-6.6.7-1.7 1.6-3.1 2.7-4.2 1.1-1 2.3-1.8 3.6-2.2 1.3-.4 2.5-.6 3.7-.6h1.6c.6.1 1.3.2 1.9.4.7.2 1.4.5 2.1 1 .7.4 1.3 1 1.8 1.7.9 1.1 1.4 2.1 1.7 3.1.2 1 .3 1.8.3 2.6h-4.7zM973.6 61.7h4.3v-5.2l4.5-1.5v6.8h5.4v3.4h-5.4v15.1c0 .3 0 .6.1 1 0 .4.1.7.4 1.1.2.4.5.6 1 .8.4.3 1 .4 1.8.4 1 0 1.7-.1 2.2-.2V87c-.9.2-2.1.3-3.8.3-2.1 0-3.6-.4-4.6-1.2-1-.8-1.5-2.2-1.5-4.2V65.1h-4.3v-3.4zM993.5 50.9h5.5V56h-5.5v-5.1m.5 10.9h4.6v25.1H994V61.8zM1006.1 74.7c0-1.6.2-3.2.6-4.8.4-1.6 1.1-3 2-4.4 1-1.3 2.2-2.4 3.8-3.2 1.6-.8 3.6-1.2 5.9-1.2 2.4 0 4.5.4 6.1 1.3 1.5.9 2.7 2 3.6 3.3.9 1.3 1.5 2.8 1.8 4.3.2.8.3 1.5.4 2.2v2.2c0 3.7-1 6.9-3 9.5-2 2.6-5.1 4-9.3 4-4-.1-7-1.4-9-3.9-1.9-2.5-2.9-5.6-2.9-9.3m4.7-.3c0 2.7.6 5 1.8 6.9 1.2 2 3 3 5.6 3.1.9 0 1.8-.2 2.7-.5.8-.3 1.6-.9 2.3-1.7.7-.8 1.3-1.9 1.8-3.2.4-1.3.6-2.9.6-4.7-.1-6.4-2.5-9.6-7.1-9.6-.7 0-1.5.1-2.4.3-.8.3-1.7.8-2.5 1.6-.8.7-1.4 1.7-1.9 3-.6 1.1-.9 2.8-.9 4.8zM1038.6 64.7l-.1-2.9h4.6v4.1c.2-.3.4-.8.7-1.2.3-.5.8-1 1.3-1.5.6-.5 1.4-1 2.3-1.3.9-.3 2-.5 3.4-.5.6 0 1.4.1 2.4.2.9.2 1.9.5 2.9 1.1 1 .6 1.8 1.4 2.5 2.5.6 1.2 1 2.7 1 4.7V87h-4.6V71c0-.9-.1-1.7-.2-2.4-.2-.7-.5-1.3-1.1-1.9-1.2-1.1-2.6-1.7-4.3-1.7-1.7 0-3.1.6-4.3 1.8-1.3 1.2-2 3.1-2 5.7V87h-4.6V64.7zM479.1 100.8h5.2l14.1 36.1h-5.3l-3.8-9.4h-16.2l-3.8 9.4h-5l14.8-36.1m-4.4 22.7H488l-6.5-17.8-6.8 17.8zM508.7 138.8c.1.7.2 1.4.4 1.9.2.6.5 1.1.9 1.6.8.9 2.3 1.4 4.4 1.5 1.6 0 2.8-.3 3.7-.9.9-.6 1.5-1.4 1.9-2.4.4-1.1.6-2.3.7-3.7.1-1.4.1-2.9.1-4.6-.5.9-1.1 1.7-1.8 2.3-.7.6-1.5 1-2.3 1.3-1.7.4-3 .6-3.9.6-1.2 0-2.4-.2-3.8-.6-1.4-.4-2.6-1.2-3.7-2.5-1-1.3-1.7-2.8-2.1-4.4-.4-1.6-.6-3.2-.6-4.8 0-4.3 1.1-7.4 3.2-9.5 2-2.1 4.6-3.1 7.6-3.1 1.3 0 2.3.1 3.2.4.9.3 1.6.6 2.1 1 .6.4 1.1.8 1.5 1.2l.9 1.2v-3.4h4.4l-.1 4.5v15.7c0 2.9-.1 5.2-.2 6.7-.2 1.6-.5 2.8-1 3.7-1.1 1.9-2.6 3.2-4.6 3.7-1.9.6-3.8.8-5.6.8-2.4 0-4.3-.3-5.6-.8-1.4-.5-2.4-1.2-3-2-.6-.8-1-1.7-1.2-2.7-.2-.9-.3-1.8-.4-2.7h4.9m5.3-5.8c1.4 0 2.5-.2 3.3-.7.8-.5 1.5-1.1 2-1.8.5-.6.9-1.4 1.2-2.5.3-1 .4-2.6.4-4.8 0-1.6-.2-2.9-.4-3.9-.3-1-.8-1.8-1.4-2.4-1.3-1.4-3-2.2-5.2-2.2-1.4 0-2.5.3-3.4 1-.9.7-1.6 1.5-2 2.4-.4 1-.7 2-.9 3-.2 1-.2 2-.2 2.8 0 1 .1 1.9.3 2.9.2 1.1.5 2.1 1 3 .5.9 1.2 1.6 2 2.2.8.7 1.9 1 3.3 1zM537.6 125.2c-.1 2.6.5 4.8 1.7 6.5 1.1 1.7 2.9 2.6 5.3 2.6 1.5 0 2.8-.4 3.9-1.3 1-.8 1.6-2.2 1.8-4h4.6c0 .6-.2 1.4-.4 2.3-.3 1-.8 2-1.7 3-.2.3-.6.6-1 1-.5.4-1 .7-1.7 1.1-.7.4-1.5.6-2.4.8-.9.3-2 .4-3.3.4-7.6-.2-11.3-4.5-11.3-12.9 0-2.5.3-4.8 1-6.8s2-3.7 3.8-5.1c1.2-.8 2.4-1.3 3.7-1.6 1.3-.2 2.2-.3 3-.3 2.7 0 4.8.6 6.3 1.6s2.5 2.3 3.1 3.9c.6 1.5 1 3.1 1.1 4.6.1 1.6.1 2.9 0 4h-17.5m12.9-3v-1.1c0-.4 0-.8-.1-1.2-.1-.9-.4-1.7-.8-2.5s-1-1.5-1.8-2.1c-.9-.5-2-.8-3.4-.8-.8 0-1.5.1-2.3.3-.8.2-1.5.7-2.2 1.3-.7.6-1.2 1.3-1.6 2.3-.4 1-.7 2.2-.8 3.7h13zM562.9 114.7l-.1-2.9h4.6v4.1c.2-.3.4-.8.7-1.2.3-.5.8-1 1.3-1.5.6-.5 1.4-1 2.3-1.3.9-.3 2-.5 3.4-.5.6 0 1.4.1 2.4.2.9.2 1.9.5 2.9 1.1 1 .6 1.8 1.4 2.5 2.5.6 1.2 1 2.7 1 4.7V137h-4.6v-16c0-.9-.1-1.7-.2-2.4-.2-.7-.5-1.3-1.1-1.9-1.2-1.1-2.6-1.7-4.3-1.7-1.7 0-3.1.6-4.3 1.8-1.3 1.2-2 3.1-2 5.7V137h-4.6v-22.3zM607 119.8c0-.3 0-.8-.1-1.4-.1-.6-.3-1.1-.6-1.8-.2-.6-.7-1.2-1.4-1.6-.7-.4-1.6-.6-2.7-.6-1.5 0-2.7.4-3.5 1.2-.9.8-1.5 1.7-1.9 2.8-.4 1.1-.6 2.2-.7 3.2-.1 1.1-.2 1.8-.1 2.4 0 1.3.1 2.5.3 3.7.2 1.2.5 2.3.9 3.3.8 2 2.4 3 4.8 3.1 1.9 0 3.3-.7 4.1-1.9.8-1.1 1.2-2.3 1.2-3.6h4.6c-.2 2.5-1.1 4.6-2.7 6.3-1.7 1.8-4.1 2.7-7.1 2.7-.9 0-2.1-.2-3.6-.6-.7-.2-1.4-.6-2.2-1-.8-.4-1.5-1-2.2-1.7-.7-.9-1.4-2.1-2-3.6-.6-1.5-.9-3.5-.9-6.1 0-2.6.4-4.8 1.1-6.6.7-1.7 1.6-3.1 2.7-4.2 1.1-1 2.3-1.8 3.6-2.2 1.3-.4 2.5-.6 3.7-.6h1.6c.6.1 1.3.2 1.9.4.7.2 1.4.5 2.1 1 .7.4 1.3 1 1.8 1.7.9 1.1 1.4 2.1 1.7 3.1.2 1 .3 1.8.3 2.6H607zM629.1 137.1l-3.4 9.3H621l3.8-9.6-10.3-25h5.2l7.6 19.8 7.7-19.8h5z"/>
</svg>
</span>
</a>
<button class="usa-menu-btn usa-button l-header__menu-button">Menu</button>
</div>
<div class="l-header__search">
<form class="usa-search usa-search--small usa-search--epa" method="get" action="https://search.epa.gov/epasearch">
<div role="search">
<label class="usa-sr-only" for="search-box">Search</label>
<input class="usa-input" id="search-box" type="search" name="querytext" placeholder="Search EPA.gov">
<!-- button class="usa-button" type="submit" --> <!-- type="submit" - removed for now to allow other unrendered buttons to render when triggered in RShiny app -->
<!-- see: https://github.com/rstudio/shiny/issues/2922 -->
<button class="usa-button usa-search__submit" style="height:2rem;margin:0;padding:0;padding-left:1rem;padding-right:1rem;border-top-left-radius: 0;border-bottom-left-radius: 0;">
<span class="usa-sr-only">Search</span>
</button>
<input type="hidden" name="areaname" value="">
<input type="hidden" name="areacontacts" value="">
<input type="hidden" name="areasearchurl" value="">
<input type="hidden" name="typeofsearch" value="epa">
<input type="hidden" name="result_template" value="">
</div>
</form>
</div>
</div>
</div>
<div class="l-header__nav">
<nav class="usa-nav usa-nav--epa" role="navigation" aria-label="EPA header navigation">
<div class="usa-nav__inner">
<button class="usa-nav__close" aria-label="Close">
<svg class="icon icon--nav-close" aria-hidden="true" role="img">
<title>Primary navigation</title>
<use xlink:href="https://www.epa.gov/themes/epa_theme/images/sprite.artifact.svg#close"></use>
</svg> </button>
<div class="usa-nav__menu">
<ul class="menu menu--main">
<li class="menu__item"><a href="https://www.epa.gov/environmental-topics" class="menu__link">Environmental Topics</a></li>
<li class="menu__item"><a href="https://www.epa.gov/laws-regulations" class="menu__link" >Laws & Regulations</a></li>
<li class="menu__item"><a href="https://www.epa.gov/report-violation" class="menu__link" >Report a Violation</a></li>
<li class="menu__item"><a href="https://www.epa.gov/aboutepa" class="menu__link" >About EPA</a></li>
</ul>
</div>
</div>
</nav>
</div>
</header>
<main id="main" class="main" role="main" tabindex="-1">'
),
# Individual Page Header
HTML(
'<div class="l-page has-footer">
<div class="l-constrain">
<div class="l-page__header">
<div class="l-page__header-first">
<div class="web-area-title"></div>
</div>
<div class="l-page__header-last">
<a href="#" class="header-link">Contact Us</a>
</div>
</div>
<article class="article">'
),
theme = "styles.css",
useShinyjs(),
shinyjs::extendShinyjs(text = app_jscode, functions = c("disableTab","enableTab")),
tags$head(tags$script(src="script.js")),
tags$head( tags$link(rel="stylesheet", type="text/css", href="app.css")),
tags$head(tags$link(rel="icon", type="mage/x-icon", href="https://www.epa.gov/themes/epa_theme/images/favicon.ico")),
#tags$head(tags$link(rel="icon", type="mage/x-icon", href="favicon.ico")),
mainPanel(
width = 12,
# spacing
fluidRow(id = "one", ),
# top controls
fluidRow(
div(id = "customBusy", class = "loading-modal")
),
fluidRow(
column(
width = 12,
div(img(src="headerImage.png", class="headerImgRes"), style="display: flex;justify-content:center")
)
),
fluidRow(
column(
width = 12,
br(),
div(span("Please complete below steps before proceeding to 'Data Exploration' :", class="text-info", style="font-weight:bold"),
span(style="float:right",
a(tags$button(tags$i(class="fas fa-arrow-down"), "Download Test Data", class="btn btn-primary btn-sm"), href="TestData.zip", target="_blank"))
),
br()
)
),
fluidRow(
column(width = 12, progressWorkflowModuleUI("statusWorkflow"))
),
fluidRow(
p(),
tabsetPanel(id="mainTabs",
tabPanel(
title="Upload Data",
value="uploadData",
fluidPage(
fluidRow(
column(
width = 12,
sidebarLayout(
sidebarPanel(
width = 3,
div(class="panel panel-default", style="margin:10px;",
div(class="panel-heading", "Step 1: Upload File", style="font-weight:bold;", icon("info-circle", style = "color:#2fa4e7", id="fileHelp")),
div(class="panel-body",
tagList(
bsPopover(id="fileHelp", title=HTML("<b>Helpful Hints</b>"), content = HTML("Files must contain only one mandatory header row containing column names.</br></br> Microsoft Excel corrupts .csv files when reopened by double clicking its icon or by using the File Open dialog. You can avoid this by using the Text or Data Import Wizard from the Excel Data Tab"),
placement = "right", trigger = "hover"),
fileInput("uploaded_data_file",
label = HTML("<b>Upload your data in .csv format</b>"),
multiple = FALSE,
buttonLabel=list(tags$b("Browse"),tags$i(class = "fa-solid fa-folder")),
accept = c(
"text/csv",
"text/comma-separated-values,text/plain",
".csv"
)
)),
uiOutput("displayFC")
)),
tagList(
uiOutput("display_runmetasummary"),
uiOutput("display_actionButton_calculateDailyStatistics"),
uiOutput("display_actionButton_saveDailyStatistics")
)
),
mainPanel(
width = 9,
uiOutput("display_raw_ts")
) # mainPanel end
) # sidebarLayout end
)# column close
)
) # fluidPage close
), # tabPanel end
tabPanel(
title="USGS & Daymet Exploration",
value="downloadData",
fluidPage(
fluidRow(
column(
width = 12,GageAndDaymetModuleUI("gageDaymetAndBase")
)# column close
) # raw
) # page
),
tabPanel(
title="Discrete Data Exploration",
value="discreateDataEx",
column(
width = 12,
sidebarLayout(
sidebarPanel(
width = 3,
div(class="panel panel-default",style="margin:10px;",
div(class="panel-heading", "Upload discrete data in .csv format", style="font-weight:bold;", icon("info-circle", style = "color: #2fa4e7", id="discreteHelp")),
div(class="panel-body",
tagList(
bsPopover(id="discreteHelp", title="Discrete data rules", content = "The column headings for the parameter\\(s\\) you are matching must be the same in the discrete and continuous data files\\. The date\\(s\\) and time\\(s\\) of the discrete vs. continuous measurements do not need to match.",
placement = "right", trigger = "hover"),
fileInput("uploaded_discrete_file",
label = NULL,
multiple = FALSE,
buttonLabel=list(tags$b("Browse"),tags$i(class = "fa-solid fa-folder")),
accept = c(
"text/csv",
"text/comma-separated-values,text/plain",
".csv"
),
),
hr(),
uiOutput("baseParameters"))
)),
),
mainPanel(
width = 9,
column(width = 12, uiOutput("discreteDateAndTimeBox")),
fluidRow(column(width = 12,
withSpinner(plotlyOutput("display_time_series_discrete"), type=1)
)),
) # mainPanel end
) # sidebarLayout end
), # column close
),
# Data Exploration ----
tabPanel(
title="Continuous Data Exploration",
value="DataExploration",
fluidPage(
fluidRow(
tabsetPanel(
id = "tabset",
tags$head(tags$style(HTML(".radio-inline {margin-right: 40px;}"))),
## DE, All Parameters ----
tabPanel("All parameters",
value = "all_parameters_tab", br(),
tabsetPanel(
id = "all_parameters_subtabs",
### DE, All, Summary Tables ----
tabPanel("Summary tables",
value = "tab_summary_tables",
br(),
br(),
column(
width = 12,
SummaryTablesModuleUI("DataExpSummaryTbls")
), # column close
br(),
), # tabPanel 1 end
### DE, All, TS Plots ----
tabPanel("Time series plots",
value = "tab_time_series", br(),
column(
width = 12,
DataExplorationTSModuleUI(id="dataExpTS")
), # column close
), # tabPanel 2 end
### DE, All, TS Annual----
tabPanel("Time series - Annual overlays",
value = "tab_time_series_overlay", br(),
column(
width = 12,
TsOverlayModuleUI(id="tsOverlayTab")
), # column close
), # tabPanel 3 end
### DE, All, Box Plots----
tabPanel("Box plots",
value = "tab_box", br(),
column(
width = 12, TsBoxPlotModuleUI(id="tsBoxPlot")
), # column close
), # tabPanel 4 end
### DE, All, CDFs ----
tabPanel("CDFs",
value = "tab_CDF", br(),
column(
width = 12, TsCDFPlotModuleUI(id="tsCDFPlot")
), # column close
br(),
), # tabPanel 5 end
### DE, All, Raster Graphs ----
tabPanel("Raster graphs",
value = "tab_raster", br(),
column(
width = 12, TsRasterPlotModuleUI(id="tsRasterPlot")
), # column close
), # tabPanel 6 end Raste
### DE, All, Climate Spiral ----
# tabPanel("Climate spiral", value="tab_climate",br(),
# column(width = 12,
# sidebarLayout(
# sidebarPanel(width=3,
# hr(),
# uiOutput("climate_input_1"),
# hr(),
# uiOutput("climate_input_2"),
#
# ),
# mainPanel(width=9,
# column(width=9,uiOutput("display_climate_spiral"))
#
# ) # mainPanel end
#
# ) # sidebarLayout end
#
# ), #column close
#
# ), #tabPanel 7 end Climate Spiral
) # inner tabsetPanel end
), # tabPanel end
# DE, Temperature ----
tabPanel("Temperature",
value = "temp_tab",br(),
tabsetPanel(
id = "temp_subtabs",
### DE, Temp, Thermal Stats----
tabPanel("Thermal statistics",
value = "sb1", br(),
column(
width = 12,ThermalStatsModuleUI("thermalStats")
), # column close
),
### DE, Temp, Air v Water ----
tabPanel("Air vs Water",
value = "sb2", br(),
column(
width = 12, AirVsWaterModuleUI("airVsWater")
) # column close
), # AW end
### DE, Temp, GDD ----
tabPanel("Growing degree days",
value = "sb3", br(),
GrowingDegreeModuleUI("growingDegree")
), # GDD, end
### DE, Temp, Therm Class ----
tabPanel("Thermal classification",
value = "sb4", br(),
br(),
column(
width = 12,ThermalClassificationModuleUI(id="thermalClassification")
) # column close
) # Termal class, end
)
), # outer tabPanel end temperature
## DE, Hydrology ----
tabPanel("Hydrology",
value = "hydro_tab",br(),
tabsetPanel(
id = "hydro_subtabs",
### DE, Hydro, IHA----
tabPanel("IHA",
value = "IHA_tab", br(),
column(
width = 12, IHAModuleUI("IHATab")
) # column close
), # tabpanel, end, IHA
### DE, Hydro, Flashiness ----
tabPanel("Flashiness",
value = "Flashiness_tab", br(),
br(),
column(
width = 12, FlashinessModuleUI("flashinessTab")
) # column close
) # tab panel Hydro flash end
)
) # Hydro, end
) # tabsetPanel end
) # fluidRow close
) # fluidPage close
)# tabPanel end Data exploration
# Create Report----
# tabPanel(
# title="Create Report",
# value="CreateReport",
# fluidPage(
# fluidRow(
# tabsetPanel(
# id = "report_subtabs",
# ### CR, Single ----
# tabPanel("SingleSite",
# value = "SingleSite_tab", br(),
# column(
# width = 12,
# sidebarLayout(
# sidebarPanel(
# width = 3,
# hr(),
# radioButtons("report_format",
# "Select report format",
# choices = c("pdf" = "pdf", "html" = "html", "word" = "docx"),
# selected = "html"
# ),
# hr(),
# textInput(
# inputId = "report_name",
# label = "Report file name",
# value = "myReport"
# ),
# hr(),
# actionButton("createReport", "Create report"),
# hr(),
# downloadButton("downloadReport", "Download Report")
# ),
# mainPanel(
# width = 9,
# column(
# width = 12,
# uiOutput("display_report_content_1"),
# br(),
# uiOutput("display_report_content_2")
# )
# ) # mainPanel end
# ) # sidebarLayout end
# ), # column close
# br(),
# column(width = 12, uiOutput("display_table_single_site"))
# ), # tabPanel close singlesite
#
# ### CR, Multi----
# tabPanel("MultiSites",
# value = "MultiSites_tab", br(),
# br(),
# fluidPage(h4(id = "big-heading", "Coming later")),
# column(width = 12, uiOutput("display_table_multiple_sites"))
# ) # tabPanel Multi close
# ) # tabsetPanel end
# ) # fluidRow end
# ) # fluidPage end
# ) # tabPanel end Create Report
) # tabsetPanel close
),
fluidRow(column(width=12))
)
# Individual Page Footer
,HTML(
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