GRASS-8.0_install

#!/usr/bin/env bash

###############################################
# Installing GRASS GIS using GNU 10.2.0 so that
# it can work with R 4.1.1
#
# by Brian Alston / Manesh Mistry, November 2021
#
# Using Ian's require function to load modules
#
 

VERSION=${VERSION:-8.0.dev}
INSTALL_PREFIX=${INSTALL_PREFIX:-/shared/ucl/apps/GRASS/GRASS-${VERSION}}
MD5=${MD5:-c278cfeb85b1564540ab214e45fe68d9}
# Slight change in location for R from 4.x
SRC_ARCHIVE=${SRC_ARCHIVE:- http://www.stats.bris.ac.uk/R/src/base/R-4/R-${VERSION}.tar.gz}
# LOCAL_ARCHIVE=${LOCAL_ARCHIVE:- 1}
# SRC_ARCHIVE=${SRC_ARCHIVE:- /home/ccaabaa/Software/R//R-${VERSION}.tar.gz}

export PATH=$INSTALL_PREFIX/bin:$PATH

# dirname=$(dirname $0 2>/dev/null || pwd)
dirname=/shared/ucl/apps/build_scripts
INCLUDES_DIR=${INCLUDES_DIR:-${dirname}/includes}
source ${INCLUDES_DIR}/module_maker_inc.sh
source ${INCLUDES_DIR}/require_inc.sh

require beta-modules
require gcc-libs/10.2.0
require compilers/gnu/10.2.0
require bison/3.0.4/gnu-4.9.2
require flex/2.5.39
require sqlite/3.36.0/gnu-10.2.0
require perl/5.22.0
require openblas/0.3.13-serial/gnu-10.2.0
require python3/3.9-gnu-10.2.0
require fftw/3.3.9/gnu-10.2.0
require libtool/2.4.6
require hdf/5-1.10.6/gnu-10.2.0
require netcdf/4.8.1/gnu-10.2.0
require proj.4/8.1.1/gnu-10.2.0
require gdal/3.3.2/gnu-10.2.0
require geos/3.9.1/gnu-10.2.0

temp_dir=`mktemp -d -p /dev/shm`
# temp_dir='/home/ccspapp/Software/R'
echo "Building in $temp_dir ..."
cd $temp_dir
module list
read -p "Press [Enter] key to start ..."

MASTER_FOLDER=$temp_dir/GRASS
mkdir -p $MASTER_FOLDER

# Where the built GRASS and ZSTD library are installed.
ZSTD_LIBRARY=$INSTALL_PREFIX/zstd_gnu-10.2.0
GRASS_DIR=$INSTALL_PREFIX/grass_gnu-10.2.0
mkdir -p $ZSTD_LIBRARY
mkdir -p $GRASS_DIR

# Installing the zstd compression library

rm -rf zstd
git clone https://github.com/facebook/zstd.git
cd zstd/
make ; make install prefix=$ZSTD_LIBRARY
export PATH=$ZSTD_LIBRARY_DIR/bin:$PATH
export LD_LIBRARY_PATH=$ZSTD_LIBRARY/lib:$LD_LIBRARY_PATH
# export LDFLAGS="$LDFLAGS /shared/ucl/apps/bison/3.0.4/gnu-4.9.2/lib/liby.a"

cd $MASTER_FOLDER

# Installing GRASS 8

rm -rf grass_master
git clone https://github.com/OSGeo/grass.git grass_master
cd $MASTER_FOLDER/grass_master
pwd

# iclass_signatures.c fails to compile. Suggested fix is to set CFLAGS like this which seems to fix
# the problem.

CFLAGS=-std=gnu99 ./configure --prefix=$GRASS_DIR/ --with-zstd-includes=$ZSTD_LIBRARY/include \
  --with-zstd-libs=$ZSTD_LIBRARY/lib --with-geos=/shared/ucl/apps/geos/3.9.1/gnu-10.2.0/bin/geos-config \
  --with-netcdf=/shared/ucl/apps/NetCDF/4.8.1-gnu-10.2.0/bin/nc-config --with-blas --with-pthread
make ; make install