From e9dfe58def78573cc0ea8b9467034566806418af Mon Sep 17 00:00:00 2001
From: vpf26432 <laura.shemilt@rfi.ac.uk>
Date: Fri, 21 Apr 2023 08:26:32 +0000
Subject: [PATCH] first attempt at an actions workflow to do the integration
 testing.

---
 .github/workflows/integration-testing.yml | 62 +++++++++++++++++++++++
 1 file changed, 62 insertions(+)
 create mode 100644 .github/workflows/integration-testing.yml

diff --git a/.github/workflows/integration-testing.yml b/.github/workflows/integration-testing.yml
new file mode 100644
index 0000000..d2b1671
--- /dev/null
+++ b/.github/workflows/integration-testing.yml
@@ -0,0 +1,62 @@
+name: Integration tests V4
+
+on:
+  pull_request:
+
+jobs:
+  container_job:
+    runs_on: ubuntu-latest
+
+    services:
+      mongo:
+        image: scimongo
+        ports: 27107:27107
+      scicat-backend:
+        image: ghcr/scicat-project/backend-next
+        ports: 3000:3000
+        environmentVariables:
+          MONGODB_URI: mongodb://mongo:27017/scicat
+          EXPRESS_SESSION_SECRET: "${EXPRESS_SESSION_SECRET}"
+          JWT_SECRET: "${JWT_SECRET}"
+          PORT: 3000
+          HTTP_MAX_REDIRECTS: 5
+          HTTP_TIMEOUT: 5000
+          JWT_EXPIRES_IN: 3600
+          SITE: SAMPLE-SITE
+          PID_PREFIX: PID.SAMPLE.PREFIX
+          DOI_PREFIX: DOI.SAMPLE.PREFIX
+          METADATA_KEYS_RETURN_LIMIT: 100
+          METADATA_PARENT_INSTANCES_RETURN_LIMIT: 100
+          ADMIN_GROUPS: admin,ingestor
+
+      steps:
+        - uses: actions/checkout@v2
+
+        - name: Set up Python ${{ matrix.python-version }}
+          uses: actions/setup-python@v2
+          with:
+            python-version: ${{ matrix.python-version }}
+
+        - name: Install
+          shell: bash -l {0}
+          run: source continuous_integration/scripts/install.sh
+
+        - name: Install test requirements
+          shell: bash -l {0}
+          run: |
+            set -vxeuo pipefail
+            python -m pip install -r requirements-dev.txt
+            python -m pip list
+
+        - name: Lint with flake8
+          shell: bash -l {0}
+          run: |
+            set -vxeuo pipefail
+            python -m flake8
+
+        - name: Test with pytest
+          shell: bash -l {0}
+          run: |
+            set -vxeuo pipefail
+            coverage run -m pytest -k tests_integration -v 
+            coverage report
\ No newline at end of file