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@compomics @EuBIC @ProteomicsML

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  1. compomics/ms2pip compomics/ms2pip Public

    MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.

    HTML 38 18

  2. compomics/DeepLC compomics/DeepLC Public

    DeepLC: Retention time prediction for (modified) peptides using Deep Learning.

    Python 55 19

  3. compomics/ms2rescore compomics/ms2rescore Public

    Modular and user-friendly platform for AI-assisted rescoring of peptide identifications

    Python 51 15

  4. compomics/psm_utils compomics/psm_utils Public

    Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python

    Python 25 7

  5. HUPO-PSI/mzSpecLib HUPO-PSI/mzSpecLib Public

    mzSpecLib: A standard format to exchange/distribute spectral libraries

    Python 24 14

  6. cascade-config cascade-config Public

    Cascading Python configuration from the CLI and config files

    Python 1