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Ben Darwin edited this page Jul 6, 2017 · 20 revisions

Overview

Pydpiper is a Python libraries and associated set of executable files intended primarily for running image processing pipelines on compute grids. It provides a domain-specific language (DSL) for constructing pipelines out of smaller components, wrappers for numerous command-line tools (currently largely MINC-centric, but currently expanding to some NIFTI and ITK-based tools), code for constructing common pipeline topologies, and command-line wrappers to run some core pipelines.

Pydpiper 2

Pydpiper 1

The pydpiper (version 1) wiki currently lives here:

https://wiki.phenogenomics.ca/display/MICePub/Pydpiper

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