diff --git a/alpharaw/match/psm_match.py b/alpharaw/match/psm_match.py index e058f27..0f5572c 100644 --- a/alpharaw/match/psm_match.py +++ b/alpharaw/match/psm_match.py @@ -146,7 +146,10 @@ def _add_missing_columns_to_psm_df( def _prepare_matching_dfs(self) -> Tuple[pd.DataFrame, pd.DataFrame, pd.DataFrame]: """ - Prepare dataframes to be matched. + Prepare empty `fragment_mz_df`, `matched_intensity_df`, + and `matched_mz_err_df` dataframes to extract peak matching information + for `self.psm_df`. These three dataframes will be only used internally + in :class:`PepSpecMatch` objects. Returns -------