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35 followers · 9 following
  • Solynta
  • Wageningen, the Netherlands

Achievements

Achievement: Pair Extraordinairex3Achievement: Starstruckx2Achievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair Extraordinairex3Achievement: Starstruckx2Achievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Organizations

@bioconda @vanheeringen-lab

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Maarten-vd-Sande/README.md

Hi, I'm Maarten van der Sande 👋

I am a PhD student computational biology at the RIMLS Nijmegen.

              

Software

Star on GitHub seq2science: Automated preprocessing of Next-Generation Sequencing data.

Star on GitHub qnorm: Fast-ish (and correct!) quantile normalization in Python.

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  1. vanheeringen-lab/seq2science vanheeringen-lab/seq2science Public

    Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.

    Python 155 27

  2. lbm lbm Public

    Free-surface implementation of lattice boltzmann in Python.

    Python 25 3

  3. qnorm qnorm Public

    Fast-ish (and correct!) quantile normalization in Python.

    Python 29 1

  4. smoothed-particle-hydrodynamics smoothed-particle-hydrodynamics Public

    Basic implementation of smoothed-particle hydrodynamics (SPH) in Python.

    Python 24 10

  5. phd-thesis phd-thesis Public

    My PhD thesis

    TeX