From 320fca142ae7e9e4311b0335cea6bd0de54b2957 Mon Sep 17 00:00:00 2001 From: "yuxuan.zhuang@dbb.su.se" Date: Wed, 1 May 2024 08:32:46 +0200 Subject: [PATCH] not use joblib when n_job=1 --- testsuite/MDAnalysisTests/analysis/test_encore.py | 3 --- 1 file changed, 3 deletions(-) diff --git a/testsuite/MDAnalysisTests/analysis/test_encore.py b/testsuite/MDAnalysisTests/analysis/test_encore.py index 318a24a936..bc07c21af7 100644 --- a/testsuite/MDAnalysisTests/analysis/test_encore.py +++ b/testsuite/MDAnalysisTests/analysis/test_encore.py @@ -138,7 +138,6 @@ def test_parallel_calculation(self): arguments[i][0]**2, err_msg="Unexpected results from ParallelCalculation") - @pytest.mark.skip(reason='test to see if it times out') def test_rmsd_matrix_with_superimposition(self, ens1): conf_dist_matrix = encore.confdistmatrix.conformational_distance_matrix( ens1, @@ -156,7 +155,6 @@ def test_rmsd_matrix_with_superimposition(self, ens1): for i, rmsd in enumerate(reference.results.rmsd): assert_allclose(conf_dist_matrix[0, i], rmsd[2], rtol=0, atol=1.5e-3, err_msg=err_msg) - @pytest.mark.skip(reason='test to see if it times out') def test_rmsd_matrix_with_superimposition_custom_weights(self, ens1): conf_dist_matrix = encore.confdistmatrix.conformational_distance_matrix( ens1, @@ -177,7 +175,6 @@ def test_rmsd_matrix_with_superimposition_custom_weights(self, ens1): for i in range(conf_dist_matrix_custom.size): assert_allclose(conf_dist_matrix_custom[0, i], conf_dist_matrix[0, i], rtol=0, atol=1.5e-7) - @pytest.mark.skip(reason='test to see if it times out') def test_rmsd_matrix_without_superimposition(self, ens1): selection_string = "name CA" selection = ens1.select_atoms(selection_string)