From c1b4d55a9dc7f4ada627781d4b509114cebb6f58 Mon Sep 17 00:00:00 2001 From: Leo Heidweiler <112557863+LeoHeidweiler@users.noreply.github.com> Date: Sun, 14 Jul 2024 15:24:16 +0200 Subject: [PATCH] Update update_documentation.yml --- .github/workflows/update_documentation.yml | 12 +++++------- 1 file changed, 5 insertions(+), 7 deletions(-) diff --git a/.github/workflows/update_documentation.yml b/.github/workflows/update_documentation.yml index 4f583cc..da3633f 100644 --- a/.github/workflows/update_documentation.yml +++ b/.github/workflows/update_documentation.yml @@ -31,20 +31,18 @@ jobs: python -m pip install --upgrade pip pip install poetry poetry install # Ensure all dependencies are installed - - - name: Debug - run: | - echo $PATH - which jupyter + - name: Verify pyyaml installation run: | poetry run python -c "import yaml; print('pyyaml installed successfully')" - - name: Install R dependencies and IRkernel + - name: Install IRkernel run: | - poetry run pip install jupyter + pip install jupyter R -e 'install.packages(c("renv", "IRkernel"))' R -e 'IRkernel::installspec(user = FALSE)' + + - name: Install R dependencies R -e "renv::restore()" - name: Run Makefile