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for test_install_arkode_C_serial. diff --git a/build/examples/arkode/C_serial/CMakeFiles/test_install_arkode_C_serial.dir/progress.make b/build/examples/arkode/C_serial/CMakeFiles/test_install_arkode_C_serial.dir/progress.make new file mode 100644 index 0000000000..225de343d6 --- /dev/null +++ b/build/examples/arkode/C_serial/CMakeFiles/test_install_arkode_C_serial.dir/progress.make @@ -0,0 +1,2 @@ +CMAKE_PROGRESS_1 = + diff --git a/build/examples/arkode/C_serial/CMakeLists.txt b/build/examples/arkode/C_serial/CMakeLists.txt new file mode 100644 index 0000000000..2a3f9cf1fc --- /dev/null +++ b/build/examples/arkode/C_serial/CMakeLists.txt @@ -0,0 +1,274 @@ +# ----------------------------------------------------------------- +# Programmer(s): Radu Serban @ LLNL +# David J. Gardner @ LLNL +# ----------------------------------------------------------------- +# SUNDIALS Copyright Start +# Copyright (c) 2002-2024, Lawrence Livermore National Security +# and Southern Methodist University. +# All rights reserved. +# +# See the top-level LICENSE and NOTICE files for details. +# +# SPDX-License-Identifier: BSD-3-Clause +# SUNDIALS Copyright End +# ----------------------------------------------------------------- +# CMakeLists.txt for ARKODE C serial examples. +# +# This file is generated from a template using variables +# set at configuration time. It can be used as a template for +# other user CMakeLists configuration files. +# ----------------------------------------------------------------- + +# Set the minimum required cmake version +cmake_minimum_required(VERSION 3.22.1) + +# Set cache variables for compilers and flags +set(CMAKE_C_COMPILER + "/usr/bin/cc" + CACHE FILEPATH "C compiler") + +set(CMAKE_C_FLAGS + "" + CACHE STRING "C compiler flags") + +if("99") + set(CMAKE_C_STANDARD "99" + CACHE STRING "C standard") +endif() + +# Specify project name and languages +project(ARKODE_C_serial_examples C) + +# Enable testing +include(CTest) + +# ------------------------------------------------------------------------------ + +# Specify the path to SUNDIALS header files +set(SUNDIALS_INCLUDE_DIR + /home/maggul/STS/sundials_install/include + CACHE PATH "Location of SUNDIALS header files") + +# Specify the path to SUNDIALS libraries +set(SUNDIALS_LIBRARY_DIR + /home/maggul/STS/sundials_install/lib + CACHE PATH "Location of SUNDIALS libraries") + +find_library(SUNDIALS_CORE_LIB + sundials_core ${SUNDIALS_LIBRARY_DIR} + DOC "SUNDIALS core library") + +find_library(SUNDIALS_SOLVER_LIB + sundials_arkode ${SUNDIALS_LIBRARY_DIR} + DOC "ARKODE library") +find_library(SUNDIALS_NVEC_LIB + sundials_nvecserial ${SUNDIALS_LIBRARY_DIR} + DOC "NVECTOR_SERIAL library") + +find_library(SUNDIALS_MANYVEC_LIB + sundials_nvecmanyvector ${SUNDIALS_LIBRARY_DIR} + DOC "NVECTOR_MANYVECTOR library") + +# Set additional libraries +set(SUNDIALS_EXTRA_LIBS -lm CACHE STRING "Additional libraries") + +# For SUNDIALS module examples the solver library is not needed +if(NOT SUNDIALS_SOLVER_LIB) + set(SUNDIALS_SOLVER_LIB "") +endif() + +# List of SUNDIALS libraries +set(SUNDIALS_LIBRARIES + -L${SUNDIALS_LIBRARY_DIR} + ${SUNDIALS_SOLVER_LIB} + ${SUNDIALS_NVEC_LIB} + ${SUNDIALS_MANYVEC_LIB} + ${SUNDIALS_CORE_LIB} + ${SUNDIALS_EXTRA_LIBS}) + +# Include the current directory +include_directories(.) + +# ------------------------------------------------------------------------------ + +# Set the names of the examples to be built and their dependencies +set(examples ark_analytic lsrk_analytic lsrk_analytic_VarJac erk_analytic ark_analytic_mels ark_analytic_nonlin ark_brusselator_1D_mri ark_brusselator_fp ark_brusselator_mri ark_brusselator ark_brusselator1D_imexmri ark_brusselator1D ark_conserved_exp_entropy_ark ark_conserved_exp_entropy_erk ark_damped_harmonic_symplectic ark_dissipated_exp_entropy ark_harmonic_symplectic ark_heat1D_adapt ark_heat1D ark_kepler ark_kpr_mri ark_KrylovDemo_prec ark_onewaycouple_mri ark_reaction_diffusion_mri ark_robertson_constraints ark_robertson_root ark_robertson ark_twowaycouple_mri) +set(examples_dependencies ) +if(examples) + list(REMOVE_DUPLICATES examples) +endif() + +# Create targets for each example +foreach(example ${examples}) + + # example source files + add_executable(${example} ${example}.c ${examples_dependencies}) + + # directories to include + target_include_directories(${example} PRIVATE ${SUNDIALS_INCLUDE_DIR}) + + # libraries to link against + target_link_libraries(${example} ${SUNDIALS_LIBRARIES}) + + # add the example to ctest + add_test(NAME ${example} COMMAND ${example}) + +endforeach() + +# ------------------------------------------------------------------------------ + +# Set LAPACK libraries +set(LAPACK_LIBRARIES + + CACHE STRING "Lapack libraries") + +# Set the names of the examples to be built and their dependencies +set(examples_bl ) +set(examples_dependencies_bl ) +if(examples_bl) + list(REMOVE_DUPLICATES examples_bl) +endif() + +if(LAPACK_LIBRARIES AND examples_bl) + + # Find the SUNDIALS linear solver libraries + find_library(SUNDIALS_SUNLINSOLLAPACKBAND_LIB + sundials_sunlinsollapackband ${SUNDIALS_LIBRARY_DIR} + DOC "SUNDIALS banded LAPACK linear solver library") + + find_library(SUNDIALS_SUNLINSOLLAPACKDENSE_LIB + sundials_sunlinsollapackdense ${SUNDIALS_LIBRARY_DIR} + DOC "SUNDIALS dense LAPACK linear solver library") + + # Create targets for each example + foreach(example ${examples_bl}) + + # example source files + add_executable(${example} ${example}.c ${examples_dependencies_bl}) + + # directories to include + target_include_directories(${example} PRIVATE ${SUNDIALS_INCLUDE_DIR}) + + # libraries to link against + target_link_libraries(${example} ${SUNDIALS_LIBRARIES}) + target_link_libraries(${example} ${SUNDIALS_SUNLINSOLLAPACKBAND_LIB}) + target_link_libraries(${example} ${SUNDIALS_SUNLINSOLLAPACKDENSE_LIB}) + target_link_libraries(${example} ${LAPACK_LIBRARIES}) + + # add the example to ctest + add_test(NAME ${example} COMMAND ${example}) + + endforeach() + +endif() + +# ------------------------------------------------------------------------------ + +# KLU include directory and libraries +set(KLU_INCLUDE_DIR + + CACHE PATH "Location of KLU header files") + +set(KLU_LIBRARIES + + CACHE STRING "KLU libraries") + +# Set the names of the examples to be built and their dependencies +set(examples_klu ) +set(examples_dependencies_klu ) +if(examples_klu) + list(REMOVE_DUPLICATES examples_klu) +endif() + +if(KLU_LIBRARIES AND examples_klu) + + # Find the SUNDIALS linear solver libraries + find_library(SUNDIALS_SUNLINSOLKLU_LIB + sundials_sunlinsolklu ${SUNDIALS_LIBRARY_DIR} + DOC "SUNDIALS KLU linear solver library") + + # Create targets for each example + foreach(example ${examples_klu}) + + # example source files + add_executable(${example} ${example}.c ${examples_dependencies_klu}) + + # directories to include + target_include_directories(${example} PRIVATE ${SUNDIALS_INCLUDE_DIR}) + target_include_directories(${example} PRIVATE ${KLU_INCLUDE_DIR}) + + # libraries to link against + target_link_libraries(${example} ${SUNDIALS_LIBRARIES}) + target_link_libraries(${example} ${SUNDIALS_SUNLINSOLKLU_LIB}) + target_link_libraries(${example} ${KLU_LIBRARIES}) + + # add the example to ctest + add_test(NAME ${example} COMMAND ${example}) + + endforeach() + +endif() + +# ------------------------------------------------------------------------------ + +# SuperLU_MT include directory, libraries, and threading type +set(SUPERLUMT_INCLUDE_DIR + + CACHE PATH "Location of SuperLU_MT KLU header files") + +set(SUPERLUMT_LIBRARIES + + CACHE STRING "SuperLU_MT libraries") + +set(SUPERLUMT_THREAD_TYPE + + CACHE STRING "SuperLU_MT Threading") + +# Set the names of the examples to be built and their dependencies +set(examples_slumt ) +set(examples_dependencies_slumt ) +if(examples_slumt) + list(REMOVE_DUPLICATES examples_slumt) +endif() + +if(SUPERLUMT_LIBRARIES AND examples_slumt) + + # Find the SUNDIALS linear solver libraries + find_library(SUNDIALS_SUNLINSOLSLUMT_LIB + sundials_sunlinsolsuperlumt ${SUNDIALS_LIBRARY_DIR} + DOC "SUNDIALS SuperLU_MT linear solver library") + + if(SUPERLUMT_THREAD_TYPE STREQUAL "OPENMP") + find_package(OpenMP REQUIRED) + # Update C compiler and linker flags + set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OpenMP_C_FLAGS}") + set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} ${OpenMP_C_FLAGS}") + else(SUPERLUMT_THREAD_TYPE STREQUAL "PTHREAD") + find_package(Threads REQUIRED) + endif() + + # Create targets for each example + foreach(example ${examples_slumt}) + + # example source files + add_executable(${example} ${example}.c ${examples_dependencies_slumt}) + + # directories to include + target_include_directories(${example} PRIVATE ${SUNDIALS_INCLUDE_DIR}) + target_include_directories(${example} PRIVATE ${SUPERLUMT_INCLUDE_DIR}) + + # libraries to link against + target_link_libraries(${example} ${SUNDIALS_LIBRARIES}) + target_link_libraries(${example} ${SUNDIALS_SUNLINSOLSLUMT_LIB}) + target_link_libraries(${example} ${SUPERLUMT_LIBRARIES}) + + if(SUPERLUMT_THREAD_TYPE STREQUAL "PTHREAD") + target_link_libraries(${example} Threads::Threads) + endif() + + # add the example to ctest + add_test(NAME ${example} COMMAND ${example}) + + endforeach() + +endif() diff --git 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"/home/maggul/STS/sundials/build/examples/arkode/C_serial/lsrk_analytic") +set_tests_properties(lsrk_analytic PROPERTIES _BACKTRACE_TRIPLES "/home/maggul/STS/sundials/cmake/macros/SundialsAddTest.cmake;204;add_test;/home/maggul/STS/sundials/examples/arkode/C_serial/CMakeLists.txt;152;sundials_add_test;/home/maggul/STS/sundials/examples/arkode/C_serial/CMakeLists.txt;0;") +add_test(lsrk_analytic_VarJac "/home/maggul/STS/sundials/build/examples/arkode/C_serial/lsrk_analytic_VarJac") +set_tests_properties(lsrk_analytic_VarJac PROPERTIES _BACKTRACE_TRIPLES "/home/maggul/STS/sundials/cmake/macros/SundialsAddTest.cmake;204;add_test;/home/maggul/STS/sundials/examples/arkode/C_serial/CMakeLists.txt;152;sundials_add_test;/home/maggul/STS/sundials/examples/arkode/C_serial/CMakeLists.txt;0;") +add_test(erk_analytic "/home/maggul/STS/sundials/build/examples/arkode/C_serial/erk_analytic") +set_tests_properties(erk_analytic PROPERTIES _BACKTRACE_TRIPLES 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examples/arkode/C_serial/CMakeFiles/ark_kepler.dir/rule +.PHONY : ark_kepler + +# fast build rule for target. +ark_kepler/fast: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_kepler.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_kepler.dir/build +.PHONY : ark_kepler/fast + +# Convenience name for target. +examples/arkode/C_serial/CMakeFiles/ark_kpr_mri.dir/rule: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 examples/arkode/C_serial/CMakeFiles/ark_kpr_mri.dir/rule +.PHONY : examples/arkode/C_serial/CMakeFiles/ark_kpr_mri.dir/rule + +# Convenience name for target. +ark_kpr_mri: examples/arkode/C_serial/CMakeFiles/ark_kpr_mri.dir/rule +.PHONY : ark_kpr_mri + +# fast build rule for target. +ark_kpr_mri/fast: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_kpr_mri.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_kpr_mri.dir/build +.PHONY : ark_kpr_mri/fast + +# Convenience name for target. +examples/arkode/C_serial/CMakeFiles/ark_KrylovDemo_prec.dir/rule: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 examples/arkode/C_serial/CMakeFiles/ark_KrylovDemo_prec.dir/rule +.PHONY : examples/arkode/C_serial/CMakeFiles/ark_KrylovDemo_prec.dir/rule + +# Convenience name for target. +ark_KrylovDemo_prec: examples/arkode/C_serial/CMakeFiles/ark_KrylovDemo_prec.dir/rule +.PHONY : ark_KrylovDemo_prec + +# fast build rule for target. +ark_KrylovDemo_prec/fast: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_KrylovDemo_prec.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_KrylovDemo_prec.dir/build +.PHONY : ark_KrylovDemo_prec/fast + +# Convenience name for target. +examples/arkode/C_serial/CMakeFiles/ark_onewaycouple_mri.dir/rule: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 examples/arkode/C_serial/CMakeFiles/ark_onewaycouple_mri.dir/rule +.PHONY : examples/arkode/C_serial/CMakeFiles/ark_onewaycouple_mri.dir/rule + +# Convenience name for target. +ark_onewaycouple_mri: examples/arkode/C_serial/CMakeFiles/ark_onewaycouple_mri.dir/rule +.PHONY : ark_onewaycouple_mri + +# fast build rule for target. +ark_onewaycouple_mri/fast: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_onewaycouple_mri.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_onewaycouple_mri.dir/build +.PHONY : ark_onewaycouple_mri/fast + +# Convenience name for target. +examples/arkode/C_serial/CMakeFiles/ark_reaction_diffusion_mri.dir/rule: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 examples/arkode/C_serial/CMakeFiles/ark_reaction_diffusion_mri.dir/rule +.PHONY : examples/arkode/C_serial/CMakeFiles/ark_reaction_diffusion_mri.dir/rule + +# 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ark_robertson_constraints + +# fast build rule for target. +ark_robertson_constraints/fast: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_robertson_constraints.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_robertson_constraints.dir/build +.PHONY : ark_robertson_constraints/fast + +# Convenience name for target. +examples/arkode/C_serial/CMakeFiles/ark_robertson_root.dir/rule: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 examples/arkode/C_serial/CMakeFiles/ark_robertson_root.dir/rule +.PHONY : examples/arkode/C_serial/CMakeFiles/ark_robertson_root.dir/rule + +# Convenience name for target. +ark_robertson_root: examples/arkode/C_serial/CMakeFiles/ark_robertson_root.dir/rule +.PHONY : ark_robertson_root + +# fast build rule for target. +ark_robertson_root/fast: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_robertson_root.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_robertson_root.dir/build +.PHONY : ark_robertson_root/fast + +# Convenience name for target. +examples/arkode/C_serial/CMakeFiles/ark_robertson.dir/rule: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 examples/arkode/C_serial/CMakeFiles/ark_robertson.dir/rule +.PHONY : examples/arkode/C_serial/CMakeFiles/ark_robertson.dir/rule + +# Convenience name for target. +ark_robertson: examples/arkode/C_serial/CMakeFiles/ark_robertson.dir/rule +.PHONY : ark_robertson + +# fast build rule for target. +ark_robertson/fast: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_robertson.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_robertson.dir/build +.PHONY : ark_robertson/fast + +# Convenience name for target. +examples/arkode/C_serial/CMakeFiles/ark_twowaycouple_mri.dir/rule: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 examples/arkode/C_serial/CMakeFiles/ark_twowaycouple_mri.dir/rule +.PHONY : examples/arkode/C_serial/CMakeFiles/ark_twowaycouple_mri.dir/rule + +# Convenience name for target. +ark_twowaycouple_mri: examples/arkode/C_serial/CMakeFiles/ark_twowaycouple_mri.dir/rule +.PHONY : ark_twowaycouple_mri + +# fast build rule for target. +ark_twowaycouple_mri/fast: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_twowaycouple_mri.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_twowaycouple_mri.dir/build +.PHONY : ark_twowaycouple_mri/fast + +# Convenience name for target. +examples/arkode/C_serial/CMakeFiles/test_install_arkode_C_serial.dir/rule: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 examples/arkode/C_serial/CMakeFiles/test_install_arkode_C_serial.dir/rule +.PHONY : examples/arkode/C_serial/CMakeFiles/test_install_arkode_C_serial.dir/rule + +# Convenience name for target. +test_install_arkode_C_serial: examples/arkode/C_serial/CMakeFiles/test_install_arkode_C_serial.dir/rule +.PHONY : test_install_arkode_C_serial + +# fast build rule for target. +test_install_arkode_C_serial/fast: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/test_install_arkode_C_serial.dir/build.make examples/arkode/C_serial/CMakeFiles/test_install_arkode_C_serial.dir/build +.PHONY : test_install_arkode_C_serial/fast + +# Convenience name for target. +examples/arkode/C_serial/CMakeFiles/test_install_all_arkode_C_serial.dir/rule: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 examples/arkode/C_serial/CMakeFiles/test_install_all_arkode_C_serial.dir/rule +.PHONY : examples/arkode/C_serial/CMakeFiles/test_install_all_arkode_C_serial.dir/rule + +# Convenience name for target. 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preprocess a source file +ark_KrylovDemo_prec.c.i: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_KrylovDemo_prec.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_KrylovDemo_prec.dir/ark_KrylovDemo_prec.c.i +.PHONY : ark_KrylovDemo_prec.c.i + +ark_KrylovDemo_prec.s: ark_KrylovDemo_prec.c.s +.PHONY : ark_KrylovDemo_prec.s + +# target to generate assembly for a file +ark_KrylovDemo_prec.c.s: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_KrylovDemo_prec.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_KrylovDemo_prec.dir/ark_KrylovDemo_prec.c.s +.PHONY : ark_KrylovDemo_prec.c.s + +ark_analytic.o: ark_analytic.c.o +.PHONY : ark_analytic.o + +# target to build an object file +ark_analytic.c.o: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_analytic.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_analytic.dir/ark_analytic.c.o +.PHONY : ark_analytic.c.o + +ark_analytic.i: ark_analytic.c.i +.PHONY : ark_analytic.i + +# target to preprocess a source file +ark_analytic.c.i: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_analytic.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_analytic.dir/ark_analytic.c.i +.PHONY : ark_analytic.c.i + +ark_analytic.s: ark_analytic.c.s +.PHONY : ark_analytic.s + +# target to generate assembly for a file +ark_analytic.c.s: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f examples/arkode/C_serial/CMakeFiles/ark_analytic.dir/build.make examples/arkode/C_serial/CMakeFiles/ark_analytic.dir/ark_analytic.c.s +.PHONY : ark_analytic.c.s + +ark_analytic_mels.o: ark_analytic_mels.c.o +.PHONY : ark_analytic_mels.o + +# target to build an object file +ark_analytic_mels.c.o: + cd /home/maggul/STS/sundials/build && $(MAKE) $(MAKESILENT) -f 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ark_robertson_constraints.o" + @echo "... ark_robertson_constraints.i" + @echo "... ark_robertson_constraints.s" + @echo "... ark_robertson_root.o" + @echo "... ark_robertson_root.i" + @echo "... ark_robertson_root.s" + @echo "... ark_twowaycouple_mri.o" + @echo "... ark_twowaycouple_mri.i" + @echo "... ark_twowaycouple_mri.s" + @echo "... erk_analytic.o" + @echo "... erk_analytic.i" + @echo "... erk_analytic.s" + @echo "... lsrk_analytic.o" + @echo "... lsrk_analytic.i" + @echo "... lsrk_analytic.s" + @echo "... lsrk_analytic_VarJac.o" + @echo "... lsrk_analytic_VarJac.i" + @echo "... lsrk_analytic_VarJac.s" +.PHONY : help + + + +#============================================================================= +# Special targets to cleanup operation of make. + +# Special rule to run CMake to check the build system integrity. +# No rule that depends on this can have commands that come from listfiles +# because they might be regenerated. +cmake_check_build_system: + cd /home/maggul/STS/sundials/build && $(CMAKE_COMMAND) -S$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) --check-build-system CMakeFiles/Makefile.cmake 0 +.PHONY : cmake_check_build_system + diff --git a/build/examples/arkode/C_serial/Makefile_ex b/build/examples/arkode/C_serial/Makefile_ex new file mode 100644 index 0000000000..62ef3acb09 --- /dev/null +++ b/build/examples/arkode/C_serial/Makefile_ex @@ -0,0 +1,133 @@ +# -*- mode: makefile -*- +# ----------------------------------------------------------------- +# Programmer(s): Radu Serban @ LLNL +# David J. Gardner @ LLNL +# ----------------------------------------------------------------- +# SUNDIALS Copyright Start +# Copyright (c) 2002-2024, Lawrence Livermore National Security +# and Southern Methodist University. +# All rights reserved. +# +# See the top-level LICENSE and NOTICE files for details. +# +# SPDX-License-Identifier: BSD-3-Clause +# SUNDIALS Copyright End +# ----------------------------------------------------------------- +# Makefile for ARKODE serial examples +# +# This file is generated from a template using variables +# set at configuration time. It can be used as a template for +# other user Makefiles. +# ----------------------------------------------------------------- + +SHELL = sh + +prefix = /home/maggul/STS/sundials_install +exec_prefix = /home/maggul/STS/sundials_install +includedir = /home/maggul/STS/sundials_install/include +libdir = /home/maggul/STS/sundials_install/lib + +CPP = +CPPFLAGS = +CC = /usr/bin/cc +CFLAGS = -O3 -DNDEBUG +LDFLAGS = +LIBS = -lm + +LINKFLAGS = -Wl,-rpath,/home/maggul/STS/sundials_install/lib + +# ----------------------------------------------------------------------------------------- + +LIBRARIES_LAPACK = -lsundials_sunlinsollapackdense -lsundials_sunlinsollapackband +LINKFLAGS_LAPACK = ${LINKFLAGS}: + +INCLUDES_KLU = +LIBRARIES_KLU = -lsundials_sunlinsolklu +LINKFLAGS_KLU = ${LINKFLAGS}: + +INCLUDES_SLUMT = +LIBRARIES_SLUMT = -lsundials_sunlinsolsuperlumt +LINKFLAGS_SLUMT = ${LINKFLAGS}: + +TMP_INCS = ${includedir} ${INCLUDES_SLUMT} ${INCLUDES_KLU} +INCLUDES = $(addprefix -I, ${TMP_INCS}) +LIBRARIES = -lsundials_arkode -lsundials_nvecserial -lsundials_nvecmanyvector -lsundials_core ${LIBS} + +# ----------------------------------------------------------------------------------------- + +EXAMPLES = ark_analytic lsrk_analytic lsrk_analytic_VarJac erk_analytic ark_analytic_mels ark_analytic_nonlin ark_brusselator_1D_mri ark_brusselator_fp ark_brusselator_mri ark_brusselator ark_brusselator1D_imexmri ark_brusselator1D ark_conserved_exp_entropy_ark ark_conserved_exp_entropy_erk ark_damped_harmonic_symplectic ark_dissipated_exp_entropy ark_harmonic_symplectic ark_heat1D_adapt ark_heat1D ark_kepler ark_kpr_mri ark_KrylovDemo_prec ark_onewaycouple_mri ark_reaction_diffusion_mri ark_robertson_constraints ark_robertson_root ark_robertson ark_twowaycouple_mri +EXAMPLES_DEPENDENCIES = + +OBJECTS = ${EXAMPLES:=.o} +OBJECTS_DEPENDENCIES = ${EXAMPLES_DEPENDENCIES:=.o} + +# LAPACK Examples +EXAMPLES_BL = +EXAMPLES_DEPENDENCIES_BL = + +OBJECTS_BL = ${EXAMPLES_BL:=.o} +OBJECTS_DEPENDENCIES_BL = ${EXAMPLES_DEPENDENCIES_BL:=.o} + +# KLU Examples +EXAMPLES_KLU = +EXAMPLES_DEPENDENCIES_KLU = + +OBJECTS_KLU = ${EXAMPLES_KLU:=.o} +OBJECTS_DEPENDENCIES_KLU = ${EXAMPLES_DEPENDENCIES_KLU:=.o} + +# SuperLU_MT Examples +EXAMPLES_SLUMT = +EXAMPLES_DEPENDENCIES_SLUMT = + +OBJECTS_SLUMT = ${EXAMPLES_SLUMT:=.o} +OBJECTS_DEPENDENCIES_SLUMT = ${EXAMPLES_DEPENDENCIES_SLUMT:=.o} + +# ----------------------------------------------------------------------------------------- + +.SUFFIXES : .o .c + +.c.o : + ${CC} ${CPPFLAGS} ${CFLAGS} ${INCLUDES} -c $< + +# ----------------------------------------------------------------------------------------- + +all: examples examples_bl examples_klu examples_slumt + +examples: ${OBJECTS} + @for i in ${EXAMPLES} ; do \ + echo "${CC} -o $${i} $${i}.o ${OBJECTS_DEPENDENCIES} ${CFLAGS} ${LDFLAGS} ${INCLUDES} -L${libdir} ${LIBRARIES} ${LINKFLAGS}" ; \ + ${CC} -o $${i} $${i}.o ${OBJECTS_DEPENDENCIES} ${CFLAGS} ${LDFLAGS} ${INCLUDES} -L${libdir} ${LIBRARIES} ${LINKFLAGS} ; \ + done + +examples_bl: ${OBJECTS_BL} + @for i in ${EXAMPLES_BL} ; do \ + echo "${CC} -o $${i} $${i}.o ${OBJECTS_DEPENDENCIES_BL} ${CFLAGS} ${LDFLAGS} ${INCLUDES} -L${libdir} ${LIBRARIES} ${LIBRARIES_LAPACK} ${LINKFLAGS_LAPACK}" ; \ + ${CC} -o $${i} $${i}.o ${OBJECTS_DEPENDENCIES_BL} ${CFLAGS} ${LDFLAGS} ${INCLUDES} -L${libdir} ${LIBRARIES} ${LIBRARIES_LAPACK} ${LINKFLAGS_LAPACK} ; \ + done + +examples_klu: ${OBJECTS_KLU} + @for i in ${EXAMPLES_KLU} ; do \ + echo "${CC} -o $${i} $${i}.o ${OBJECTS_DEPENDENCIES_KLU} ${CFLAGS} ${LDFLAGS} ${INCLUDES} -L${libdir} ${LIBRARIES} ${LIBRARIES_KLU} ${LINKFLAGS_KLU}" ; \ + ${CC} -o $${i} $${i}.o ${OBJECTS_DEPENDENCIES_KLU} ${CFLAGS} ${LDFLAGS} ${INCLUDES} -L${libdir} ${LIBRARIES} ${LIBRARIES_KLU} ${LINKFLAGS_KLU} ; \ + done + +examples_slumt: ${OBJECTS_SLUMT} + @for i in ${EXAMPLES_SLUMT} ; do \ + echo "${CC} -o $${i} $${i}.o ${OBJECTS_DEPENDENCIES_SLUMT} ${CFLAGS} ${LDFLAGS} ${INCLUDES} -L${libdir} ${LIBRARIES} ${LIBRARIES_SLUMT} ${LINKFLAGS_SLUMT}" ; \ + ${CC} -o $${i} $${i}.o ${OBJECTS_DEPENDENCIES_SLUMT} ${CFLAGS} ${LDFLAGS} ${INCLUDES} -L${libdir} ${LIBRARIES} ${LIBRARIES_SLUMT} ${LINKFLAGS_SLUMT} ; \ + done + +${OBJECTS}: ${OBJECTS_DEPENDENCIES} + +${OBJECTS_BL}: ${OBJECTS_DEPENDENCIES_BL} + +${OBJECTS_KLU}: ${OBJECTS_DEPENDENCIES_KLU} + +${OBJECTS_SLUMT}: ${OBJECTS_DEPENDENCIES_SLUMT} + +clean: + rm -f ${OBJECTS_DEPENDENCIES} ${OBJECTS_DEPENDENCIES_BL} ${OBJECTS_DEPENDENCIES_KLU} ${OBJECTS_DEPENDENCIES_SLUMT} + rm -f ${OBJECTS} ${OBJECTS_BL} ${OBJECTS_KLU} ${OBJECTS_SLUMT} + rm -f ${EXAMPLES} ${EXAMPLES_BL} ${EXAMPLES_KLU} ${EXAMPLES_SLUMT} + +# ----------------------------------------------------------------------------------------- diff --git a/build/examples/arkode/C_serial/ark_KrylovDemo_prec b/build/examples/arkode/C_serial/ark_KrylovDemo_prec new file mode 100755 index 0000000000000000000000000000000000000000..7c72d27ecdb91e94bf0e6895f89577575e9472a2 GIT binary patch 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CMAKE_INSTALL_CONFIG_NAME) + if(BUILD_TYPE) + string(REGEX REPLACE "^[^A-Za-z0-9_]+" "" + CMAKE_INSTALL_CONFIG_NAME "${BUILD_TYPE}") + else() + set(CMAKE_INSTALL_CONFIG_NAME "RelWithDebInfo") + endif() + message(STATUS "Install configuration: \"${CMAKE_INSTALL_CONFIG_NAME}\"") +endif() + +# Set the component getting installed. +if(NOT CMAKE_INSTALL_COMPONENT) + if(COMPONENT) + message(STATUS "Install component: \"${COMPONENT}\"") + set(CMAKE_INSTALL_COMPONENT "${COMPONENT}") + else() + set(CMAKE_INSTALL_COMPONENT) + endif() +endif() + +# Install shared libraries without execute permission? +if(NOT DEFINED CMAKE_INSTALL_SO_NO_EXE) + set(CMAKE_INSTALL_SO_NO_EXE "1") +endif() + +# Is this installation the result of a crosscompile? +if(NOT DEFINED CMAKE_CROSSCOMPILING) + set(CMAKE_CROSSCOMPILING "FALSE") +endif() + +# Set default install directory permissions. +if(NOT DEFINED CMAKE_OBJDUMP) + set(CMAKE_OBJDUMP "/usr/bin/objdump") +endif() + +if("x${CMAKE_INSTALL_COMPONENT}x" STREQUAL 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8.0000000000000000e+00 1.4464413277079933e+00 + 9.0000000000000000e+00 1.4601390944744750e+00 + 1.0000000000000000e+01 1.4711276413486425e+00 diff --git a/examples/arkode/C_serial/CMakeLists.txt b/examples/arkode/C_serial/CMakeLists.txt index add49c3c21..7d6ef198bb 100644 --- a/examples/arkode/C_serial/CMakeLists.txt +++ b/examples/arkode/C_serial/CMakeLists.txt @@ -23,6 +23,7 @@ set(ARKODE_examples # tests that are always run "ark_analytic\;\;" "lsrk_analytic\;\;" + "lsrk_analytic_VarJac\;\;" "erk_analytic\;\;" # develop tests "ark_analytic_mels\;\;develop" diff --git a/src/arkode/arkode_lsrkstep.c b/src/arkode/arkode_lsrkstep.c index 9b9d9292a1..2f48c428de 100644 --- a/src/arkode/arkode_lsrkstep.c +++ b/src/arkode/arkode_lsrkstep.c @@ -403,8 +403,8 @@ int lsrkStep_Init(ARKodeMem ark_mem, int init_type) } /* Retrieve/store method and embedding orders now that table is finalized */ - step_mem->q = ark_mem->hadapt_mem->q = 2; - step_mem->p = ark_mem->hadapt_mem->p = 2; + step_mem->q = ark_mem->hadapt_mem->q = 3; + step_mem->p = ark_mem->hadapt_mem->p = 3; /* Allocate ARK RHS vector memory, update storage requirements */ /* Allocate Fe if needed */ diff --git a/src/arkode/arkode_lsrkstep_io.c b/src/arkode/arkode_lsrkstep_io.c index ca5b8f59d0..d67972da47 100644 --- a/src/arkode/arkode_lsrkstep_io.c +++ b/src/arkode/arkode_lsrkstep_io.c @@ -284,7 +284,7 @@ int lsrkStep_SetDefaults(ARKodeMem ark_mem) } } ark_mem->hadapt_mem->hcontroller = NULL; - ark_mem->hadapt_mem->hcontroller = SUNAdaptController_PI(ark_mem->sunctx); + ark_mem->hadapt_mem->hcontroller = SUNAdaptController_ImpGus(ark_mem->sunctx); if (ark_mem->hadapt_mem->hcontroller == NULL) { arkProcessError(ark_mem, ARK_MEM_FAIL, __LINE__, __func__, __FILE__, @@ -326,12 +326,12 @@ int lsrkStep_SetDefaults(ARKodeMem ark_mem) ark_mem->hadapt_mem->etamxf = SUN_RCONST(0.3); /* max change on error-failed step */ ark_mem->hadapt_mem->safety = SUN_RCONST(0.99); /* step adaptivity safety factor */ - ark_mem->hadapt_mem->growth = SUN_RCONST(25.0); /* step adaptivity growth factor */ + ark_mem->hadapt_mem->growth = SUN_RCONST(50.0); /* step adaptivity growth factor */ (void)SUNAdaptController_SetErrorBias(ark_mem->hadapt_mem->hcontroller, SUN_RCONST(1.2)); - (void)SUNAdaptController_SetParams_PI(ark_mem->hadapt_mem->hcontroller, - SUN_RCONST(0.8), -SUN_RCONST(0.31)); + (void)SUNAdaptController_SetParams_ImpGus(ark_mem->hadapt_mem->hcontroller, + SUN_RCONST(0.98), -SUN_RCONST(-0.95)); return (ARK_SUCCESS); }