Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

link Bacdive isolation source categories to each other to represent hierarchy #191

Open
realmarcin opened this issue Jul 1, 2024 · 1 comment

Comments

@realmarcin
Copy link
Contributor

"Cat1": "#Environmental",
"Cat2": "#Aquatic",
"Cat3": "#Mangrove

NCBITaxon|Strain -> location_of -> Cat3/Cat2/Cat1 -> subclass_of -> Cat2 -> Cat1

@bsantan
Copy link
Collaborator

bsantan commented Jul 2, 2024

Edges added in PR #189, however need to consider cases where there is some branching in the hierarchy, e.g. {‘Cat1’: ‘#Environmental’, ‘Cat2’: ‘#Aquatic’, ‘Cat3’: ‘#Geologic’}, {‘Cat1’: ‘#Environmental’, ‘Cat2’: ‘#Terrestrial’, ‘Cat3’: ‘#Geologic’}. We might consider concatenating Cat2 and Cat3 for more specificity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants