From aac4a499924ef2739ccf8526998a9812f5f84a72 Mon Sep 17 00:00:00 2001 From: Lazaro Alonso Date: Thu, 5 Oct 2023 20:45:06 +0200 Subject: [PATCH] up DD bounds --- Project.toml | 2 +- docs/Manifest.toml | 124 +++++++++++++++++++++++---------------------- 2 files changed, 65 insertions(+), 61 deletions(-) diff --git a/Project.toml b/Project.toml index 652e28c5..f16c9e72 100644 --- a/Project.toml +++ b/Project.toml @@ -34,7 +34,7 @@ YAXArrayBase = "90b8fcef-0c2d-428d-9c56-5f86629e9d14" [compat] CFTime = "0.0, 0.1" DataStructures = "0.17, 0.18" -DimensionalData = "0.24" +DimensionalData = "0.24, 0.25" DiskArrayTools = "0.1" DiskArrays = "0.3" DocStringExtensions = "0.8, 0.9" diff --git a/docs/Manifest.toml b/docs/Manifest.toml index 14c603cd..82f8155d 100644 --- a/docs/Manifest.toml +++ b/docs/Manifest.toml @@ -183,9 +183,9 @@ version = "1.0.5" [[deps.CairoMakie]] deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "PrecompileTools", "SHA"] -git-tree-sha1 = "696e7931bd6f5c773418452cbe5fd241cb85ac2a" +git-tree-sha1 = "74384dc4aba2b377e22703e849154252930c434d" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -version = "0.10.9" +version = "0.10.11" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -219,9 +219,9 @@ version = "0.4.0" [[deps.ColorSchemes]] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] -git-tree-sha1 = "d9a8f86737b665e15a9641ecbac64deef9ce6724" +git-tree-sha1 = "67c1f244b991cad9b0aa4b7540fb758c2488b129" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.23.0" +version = "3.24.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -254,9 +254,9 @@ version = "0.3.0" [[deps.Compat]] deps = ["UUIDs"] -git-tree-sha1 = "e460f044ca8b99be31d35fe54fc33a5c33dd8ed7" +git-tree-sha1 = "8a62af3e248a8c4bad6b32cbbe663ae02275e32c" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "4.9.0" +version = "4.10.0" weakdeps = ["Dates", "LinearAlgebra"] [deps.Compat.extensions] @@ -358,15 +358,15 @@ version = "0.24.13" [[deps.DiskArrayTools]] deps = ["DiskArrays", "Interpolations", "IterTools", "OffsetArrays"] -git-tree-sha1 = "225732e17d8818d416b57a07b3a02763e72a0e01" +git-tree-sha1 = "b790ac256df1be83ce3e04bb64b27a272721cf46" uuid = "fcd2136c-9f69-4db6-97e5-f31981721d63" -version = "0.1.6" +version = "0.1.8" [[deps.DiskArrays]] deps = ["OffsetArrays"] -git-tree-sha1 = "ff14e3ab4b618d33eca0ee32eb389aacb0b67330" +git-tree-sha1 = "7a6ada7a039841a8eac8fe22690d55b401f8b52c" uuid = "3c3547ce-8d99-4f5e-a174-61eb10b00ae3" -version = "0.3.17" +version = "0.3.20" [[deps.Distributed]] deps = ["Random", "Serialization", "Sockets"] @@ -374,9 +374,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "938fe2981db009f531b6332e31c58e9584a2f9bd" +git-tree-sha1 = "3d5873f811f582873bb9871fc9c451784d5dc8c7" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.100" +version = "0.25.102" [deps.Distributions.extensions] DistributionsChainRulesCoreExt = "ChainRulesCore" @@ -503,9 +503,9 @@ version = "1.16.1" [[deps.FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] -git-tree-sha1 = "e27c4ebe80e8699540f2d6c805cc12203b614f12" +git-tree-sha1 = "9f00e42f8d99fdde64d40c8ea5d14269a2e2c1aa" uuid = "48062228-2e41-5def-b9a4-89aafe57970f" -version = "0.9.20" +version = "0.9.21" [[deps.FileWatching]] uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" @@ -607,9 +607,9 @@ version = "3.3.8+0" [[deps.GLMakie]] deps = ["ColorTypes", "Colors", "FileIO", "FixedPointNumbers", "FreeTypeAbstraction", "GLFW", "GeometryBasics", "LinearAlgebra", "Makie", "Markdown", "MeshIO", "ModernGL", "Observables", "PrecompileTools", "Printf", "ShaderAbstractions", "StaticArrays"] -git-tree-sha1 = "a92cc6b1fb1b6233818aab02e88293b07cf445e5" +git-tree-sha1 = "b46b637cf3e1945354e77c016f867198b829d2f6" uuid = "e9467ef8-e4e7-5192-8a1a-b1aee30e663a" -version = "0.8.9" +version = "0.8.11" [[deps.GPUArraysCore]] deps = ["Adapt"] @@ -624,9 +624,9 @@ version = "0.4.1" [[deps.GeoInterface]] deps = ["Extents"] -git-tree-sha1 = "bb198ff907228523f3dee1070ceee63b9359b6ab" +git-tree-sha1 = "d53480c0793b13341c40199190f92c611aa2e93c" uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f" -version = "1.3.1" +version = "1.3.2" [[deps.GeoInterfaceRecipes]] deps = ["GeoInterface", "RecipesBase"] @@ -898,9 +898,9 @@ version = "2.2.10" [[deps.JpegTurbo]] deps = ["CEnum", "FileIO", "ImageCore", "JpegTurbo_jll", "TOML"] -git-tree-sha1 = "327713faef2a3e5c80f96bf38d1fa26f7a6ae29e" +git-tree-sha1 = "d65930fa2bc96b07d7691c652d701dcbe7d9cf0b" uuid = "b835a17e-a41a-41e7-81f0-2f016b05efe0" -version = "0.1.3" +version = "0.1.4" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -1082,9 +1082,9 @@ uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" [[deps.LoggingExtras]] deps = ["Dates", "Logging"] -git-tree-sha1 = "0d097476b6c381ab7906460ef1ef1638fbce1d91" +git-tree-sha1 = "c1dd6d7978c12545b4179fb6153b9250c96b0075" uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" -version = "1.0.2" +version = "1.0.3" [[deps.Lz4_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -1124,15 +1124,15 @@ version = "0.5.11" [[deps.Makie]] deps = ["Animations", "Base64", "CRC32c", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG_jll", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "InteractiveUtils", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Setfield", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "StableHashTraits", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun"] -git-tree-sha1 = "ecc334efc4a8a68800776b0d85ab7bb2fff63f7a" +git-tree-sha1 = "1d16d20279a145119899b4205258332f0fbeaa94" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.19.9" +version = "0.19.11" [[deps.MakieCore]] -deps = ["Observables"] -git-tree-sha1 = "1efb1166dd9398f2ccf6d728f896658c9c84733e" +deps = ["Observables", "REPL"] +git-tree-sha1 = "a94bf3fef9c690a2a4ac1d09d86a59ab89c7f8e4" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.6.6" +version = "0.6.8" [[deps.MakieTeX]] deps = ["Cairo", "CairoMakie", "Colors", "DocStringExtensions", "Ghostscript_jll", "Glib_jll", "LaTeXStrings", "Makie", "Perl_jll", "Poppler_jll", "tectonic_jll"] @@ -1179,9 +1179,9 @@ version = "0.4.10" [[deps.MicrosoftMPI_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "a8027af3d1743b3bfae34e54872359fdebb31422" +git-tree-sha1 = "a7023883872e52bc29bcaac74f19adf39347d2d5" uuid = "9237b28f-5490-5468-be7b-bb81f5f5e6cf" -version = "10.1.3+4" +version = "10.1.4+0" [[deps.Missings]] deps = ["DataAPI"] @@ -1335,9 +1335,9 @@ version = "0.8.1+0" [[deps.OpenMPI_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] -git-tree-sha1 = "f3080f4212a8ba2ceb10a34b938601b862094314" +git-tree-sha1 = "e25c1778a98e34219a00455d6e4384e017ea9762" uuid = "fe0851c0-eecd-5654-98d4-656369965a5c" -version = "4.1.5+0" +version = "4.1.6+0" [[deps.OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] @@ -1347,9 +1347,9 @@ version = "1.4.1" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "e78db7bd5c26fc5a6911b50a47ee302219157ea8" +git-tree-sha1 = "ceeda72c9fd6bbebc4f4f598560789145a8b6c4c" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "3.0.10+0" +version = "3.0.11+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1381,9 +1381,9 @@ version = "10.42.0+0" [[deps.PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "67eae2738d63117a196f497d7db789821bce61d1" +git-tree-sha1 = "528664265c9c36b3ecdb6d721d47aaab52ddf267" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.17" +version = "0.11.24" [[deps.PNGFiles]] deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"] @@ -1515,9 +1515,9 @@ version = "1.2.0" [[deps.Preferences]] deps = ["TOML"] -git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" +git-tree-sha1 = "00805cd429dcb4870060ff49ef443486c262e38e" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.4.0" +version = "1.4.1" [[deps.PrettyTables]] deps = ["Crayons", "LaTeXStrings", "Markdown", "Printf", "Reexport", "StringManipulation", "Tables"] @@ -1543,9 +1543,9 @@ version = "1.9.0" [[deps.Proj]] deps = ["CEnum", "CoordinateTransformations", "GeoFormatTypes", "GeoInterface", "NetworkOptions", "PROJ_jll"] -git-tree-sha1 = "100c0fd4e8e8d2130814307c8d231112ac6922fa" +git-tree-sha1 = "76ab3cbf876f3c859b6cc5817d8262809add3e13" uuid = "c94c279d-25a6-4763-9509-64d165bea63e" -version = "1.5.0" +version = "1.7.0" [[deps.QOI]] deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] @@ -1555,9 +1555,9 @@ version = "1.0.0" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] -git-tree-sha1 = "6ec7ac8412e83d57e313393220879ede1740f9ee" +git-tree-sha1 = "9ebcd48c498668c7fa0e97a9cae873fbee7bfee1" uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" -version = "2.8.2" +version = "2.9.1" [[deps.REPL]] deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"] @@ -1677,9 +1677,9 @@ version = "1.1.1" [[deps.ShaderAbstractions]] deps = ["ColorTypes", "FixedPointNumbers", "GeometryBasics", "LinearAlgebra", "Observables", "StaticArrays", "StructArrays", "Tables"] -git-tree-sha1 = "0d15c3e7b2003f4451714f08ffec2b77badc2dc4" +git-tree-sha1 = "db0219befe4507878b1a90e07820fed3e62c289d" uuid = "65257c39-d410-5151-9873-9b3e5be5013e" -version = "0.3.0" +version = "0.4.0" [[deps.SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] @@ -1792,9 +1792,9 @@ version = "0.1.1" [[deps.StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore"] -git-tree-sha1 = "51621cca8651d9e334a659443a74ce50a3b6dfab" +git-tree-sha1 = "0adf069a2a490c47273727e029371b31d44b72b2" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.6.3" +version = "1.6.5" weakdeps = ["Statistics"] [deps.StaticArrays.extensions] @@ -1818,9 +1818,9 @@ version = "1.7.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "d1bf48bfcc554a3761a133fe3a9bb01488e06916" +git-tree-sha1 = "1d77abd07f617c4868c33d4f5b9e1dbb2643c9cf" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.33.21" +version = "0.34.2" [[deps.StatsFuns]] deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] @@ -1881,10 +1881,10 @@ uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c" version = "1.0.1" [[deps.Tables]] -deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "OrderedCollections", "TableTraits", "Test"] -git-tree-sha1 = "1544b926975372da01227b382066ab70e574a3ec" +deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "OrderedCollections", "TableTraits"] +git-tree-sha1 = "a1f34829d5ac0ef499f6d84428bd6b4c71f02ead" uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" -version = "1.10.1" +version = "1.11.0" [[deps.Tar]] deps = ["ArgTools", "SHA"] @@ -1909,9 +1909,9 @@ version = "2.1.1" [[deps.TiffImages]] deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] -git-tree-sha1 = "8621f5c499a8aa4aa970b1ae381aae0ef1576966" +git-tree-sha1 = "7fd97bd1c5b1ff53a291cbd351d1d3d6ff4da5a5" uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" -version = "0.6.4" +version = "0.6.7" [[deps.TranscodingStreams]] deps = ["Random", "Test"] @@ -1954,15 +1954,19 @@ version = "0.4.1" [[deps.WGLMakie]] deps = ["Colors", "FileIO", "FreeTypeAbstraction", "GeometryBasics", "Hyperscript", "JSServe", "LinearAlgebra", "Makie", "Observables", "PNGFiles", "PrecompileTools", "RelocatableFolders", "ShaderAbstractions", "StaticArrays"] -git-tree-sha1 = "26e690019b85187838f122c980d590e334cc7e1a" +git-tree-sha1 = "9144b1c6a99bb3a55d056afc5f007465668241bf" uuid = "276b4fcb-3e11-5398-bf8b-a0c2d153d008" -version = "0.8.13" +version = "0.8.15" [[deps.WeightedOnlineStats]] -deps = ["LinearAlgebra", "MultivariateStats", "OnlineStats", "OnlineStatsBase", "Statistics", "StatsBase"] -git-tree-sha1 = "b2dba91e787e710881b57dd70c52948beb036e70" +deps = ["LinearAlgebra", "OnlineStats", "OnlineStatsBase", "Statistics", "StatsBase"] +git-tree-sha1 = "f80717cc4bc3699a8df24133203de46217811443" uuid = "bbac0a1f-7c9d-5672-960b-c6ca726e5d5d" -version = "0.6.1" +version = "0.6.2" +weakdeps = ["MultivariateStats"] + + [deps.WeightedOnlineStats.extensions] + PcaExt = "MultivariateStats" [[deps.WidgetsBase]] deps = ["Observables"] @@ -1978,9 +1982,9 @@ version = "0.5.5" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "04a51d15436a572301b5abbb9d099713327e9fc4" +git-tree-sha1 = "24b81b59bd35b3c42ab84fa589086e19be919916" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.10.4+0" +version = "2.11.5+0" [[deps.XMLDict]] deps = ["EzXML", "IterTools", "OrderedCollections"] @@ -2082,7 +2086,7 @@ version = "0.6.1" deps = ["CFTime", "DataStructures", "Dates", "DimensionalData", "DiskArrayTools", "DiskArrays", "Distributed", "DocStringExtensions", "Glob", "Interpolations", "IntervalSets", "IterTools", "Markdown", "OffsetArrays", "OnlineStats", "Optim", "OrderedCollections", "ParallelUtilities", "ProgressMeter", "Reexport", "Requires", "Statistics", "StatsBase", "Tables", "WeightedOnlineStats", "YAXArrayBase"] path = ".." uuid = "c21b50f5-aa40-41ea-b809-c0f5e47bfa5c" -version = "0.5.0" +version = "0.5.1" [[deps.Zarr]] deps = ["AWSS3", "Blosc", "CodecZlib", "DataStructures", "Dates", "DiskArrays", "HTTP", "JSON", "LRUCache", "OffsetArrays", "OpenSSL", "Pkg", "URIs"]