Python code and example files by Timo Lubitz, Jens Hahn, Elad Noor, Frank Bergmann (2015)
This repository holds files and information on SBtab, a table format for Systems Biology. The directories and their contents are:
definition table:
Default definitions of predefined SBtab table types.
excel:
windows installer and source code for the excel add-in (copyright Frank T. Bergmann).
sbtab examples:
example SBtab files.
python:
- commandline scripts:
command line python scripts, including validator and converter to and from SBML (copyright Timo Lubitz). - documentation:
HTML documentation of the SBtab repository and source code (copyright Timo Lubitz & Jens Hahn). - sqlite interface:
Python interface for querying SQLite database via SBtab (copyright Elad Noor). - tablib:
Tablib module for the handling of table files (copyright Kenneth Reitz, whereas the interface has been slightly changed to support SBtab files as desired). - web2py:
Web2py server files for the SBtab online tools. Can be run locally and offline if required (copyright Massimo Di Pierro (web2py) and Timo Lubitz (SBtab application))