diff --git a/ansible/roles/standardise/tasks/standardise-file.yaml b/ansible/roles/standardise/tasks/standardise-file.yaml index a31176f..fb86577 100644 --- a/ansible/roles/standardise/tasks/standardise-file.yaml +++ b/ansible/roles/standardise/tasks/standardise-file.yaml @@ -54,10 +54,6 @@ that: - standchunksize | int > 0 - - name: Display chunksize - debug: - var: standchunksize - # Set nextflow_timeout_minutes based on the expected input file(s), speed of python script and number of CPUS. # If this is development or the value is lower than the default then the default is used. - name: Set nextflow_timeout_calc @@ -133,6 +129,10 @@ debug: msg: nextflow_timeout_minutes={{ nextflow_timeout_minutes }} nextflow_poll_period_minutes={{ nextflow_poll_period_minutes }} + - name: Display molecule count and chunk size + debug: + msg: Total molecules {{ mol_count }} chunk size {{ standchunksize }} + - name: Run nextflow (Standardize) (async) command: "{{ nextflow_cmd }}" async: "{{ nextflow_timeout_minutes|int * 60 }}"