From e5b293de578b14af35da409221fbdeee654cfa9d Mon Sep 17 00:00:00 2001 From: ubyndr Date: Wed, 17 Apr 2024 10:12:47 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20INCATool?= =?UTF-8?q?s/pandasaurus=5Fcxg@d5685b330fbed18b7a3a8961839f0bd93b5ba547=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- _modules/pandasaurus_cxg/anndata_enricher.html | 4 ++-- pandasaurus_cxg/anndata_enricher.html | 9 ++++++--- searchindex.js | 2 +- 3 files changed, 9 insertions(+), 6 deletions(-) diff --git a/_modules/pandasaurus_cxg/anndata_enricher.html b/_modules/pandasaurus_cxg/anndata_enricher.html index 8642f68..2fed146 100644 --- a/_modules/pandasaurus_cxg/anndata_enricher.html +++ b/_modules/pandasaurus_cxg/anndata_enricher.html @@ -357,8 +357,8 @@

Source code for pandasaurus_cxg.anndata_enricher

Create a dictionary from enriched_df for mapping cell type ontology term IDs to their labels. Returns: - A dictionary where keys are cell type ontology term IDs (e.g., "CL:000001") and values are - corresponding cell type labels (e.g., "Neuron"). + Dict[str, str]: A dictionary where keys are cell type ontology term IDs (e.g., "CL:000001") and + values are corresponding cell type labels (e.g., "Neuron"). Raises: MissingEnrichmentProcess: If the enrichment process has not been performed, and the diff --git a/pandasaurus_cxg/anndata_enricher.html b/pandasaurus_cxg/anndata_enricher.html index d5873ca..25c6f3b 100644 --- a/pandasaurus_cxg/anndata_enricher.html +++ b/pandasaurus_cxg/anndata_enricher.html @@ -176,11 +176,14 @@

Documentation
Returns:
-

000001”) and values are -corresponding cell type labels (e.g., “Neuron”).

+

+
A dictionary where keys are cell type ontology term IDs (e.g., “CL:000001”) and

values are corresponding cell type labels (e.g., “Neuron”).

+
+
+

Return type:
-

A dictionary where keys are cell type ontology term IDs (e.g., “CL

+

Dict[str, str]

Raises:

MissingEnrichmentProcess – If the enrichment process has not been performed, and the diff --git a/searchindex.js b/searchindex.js index d3fcd01..ef7b7e8 100644 --- a/searchindex.js +++ b/searchindex.js @@ -1 +1 @@ -Search.setIndex({"docnames": ["index", "introduction", "pandasaurus_cxg/anndata_analyzer", "pandasaurus_cxg/anndata_enricher", "pandasaurus_cxg/enrichment_analysis", "pandasaurus_cxg/graph_generator/graph_generator", "pandasaurus_cxg/graph_generator/graph_generator_utils", "pandasaurus_cxg/graph_generator/index", "pandasaurus_cxg/index", "pandasaurus_cxg/utils/anndata_loader", "pandasaurus_cxg/utils/exception", "pandasaurus_cxg/utils/index"], "filenames": ["index.rst", "introduction.rst", "pandasaurus_cxg/anndata_analyzer.rst", "pandasaurus_cxg/anndata_enricher.rst", "pandasaurus_cxg/enrichment_analysis.rst", "pandasaurus_cxg/graph_generator/graph_generator.rst", "pandasaurus_cxg/graph_generator/graph_generator_utils.rst", "pandasaurus_cxg/graph_generator/index.rst", 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