diff --git a/poetry.lock b/poetry.lock
index d3bab94..a70b9d2 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,4 +1,4 @@
-# This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand.
+# This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand.
 
 [[package]]
 name = "airium"
@@ -147,36 +147,6 @@ charset-normalizer = ["charset-normalizer"]
 html5lib = ["html5lib"]
 lxml = ["lxml"]
 
-[[package]]
-name = "bioregistry"
-version = "0.10.134"
-description = "Integrated registry of biological databases and nomenclatures"
-optional = false
-python-versions = ">=3.8"
-files = [
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-    {file = "bioregistry-0.10.134.tar.gz", hash = "sha256:ce69103053fc8c4f8c1d008cb8141aee7bd617b24322c4087d8e12e061e0a2e8"},
-]
-
-[package.dependencies]
-click = "*"
-curies = ">=0.7.0"
-more-click = ">=0.1.2"
-pydantic = "*"
-pystow = ">=0.1.13"
-requests = "*"
-tqdm = "*"
-
-[package.extras]
-align = ["beautifulsoup4", "class-resolver", "defusedxml", "fairsharing-client (>=0.1.0)", "pyyaml", "tabulate"]
-charts = ["jinja2", "matplotlib", "matplotlib-venn", "pandas", "seaborn"]
-docs = ["autodoc-pydantic", "sphinx", "sphinx-automodapi", "sphinx-click", "sphinx-rtd-theme"]
-export = ["ndex2", "pyyaml", "rdflib", "rdflib-jsonld"]
-gha = ["more-itertools"]
-health = ["click-default-group", "jinja2", "pandas", "pyyaml", "tabulate"]
-tests = ["coverage", "httpx", "more-itertools", "pytest"]
-web = ["bootstrap-flask (<=2.0.0)", "curies[fastapi]", "fastapi", "flask (<2.2.4)", "markdown", "pyyaml", "rdflib", "rdflib-endpoint", "rdflib-jsonld", "uvicorn", "werkzeug (<2.3.0)"]
-
 [[package]]
 name = "black"
 version = "23.12.1"
@@ -223,17 +193,6 @@ d = ["aiohttp (>=3.7.4)", "aiohttp (>=3.7.4,!=3.9.0)"]
 jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"]
 uvloop = ["uvloop (>=0.15.2)"]
 
-[[package]]
-name = "cachetools"
-version = "5.3.2"
-description = "Extensible memoizing collections and decorators"
-optional = false
-python-versions = ">=3.7"
-files = [
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-]
-
 [[package]]
 name = "cattrs"
 version = "23.2.3"
@@ -382,13 +341,13 @@ files = [
 
 [[package]]
 name = "class-resolver"
-version = "0.4.2"
+version = "0.4.3"
 description = "Lookup and instantiate classes with style."
 optional = false
 python-versions = ">=3.7"
 files = [
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+    {file = "class_resolver-0.4.3-py3-none-any.whl", hash = "sha256:9a0e3420edc262f1eb357580ff607ddc5806b9c0d19354a6f3dede15a69fbea0"},
+    {file = "class_resolver-0.4.3.tar.gz", hash = "sha256:18bb9983cb377f669e5900979de4aa65449d95ead61838fa12862958998c71a2"},
 ]
 
 [package.dependencies]
@@ -496,63 +455,63 @@ test-no-images = ["pytest", "pytest-cov", "pytest-xdist", "wurlitzer"]
 
 [[package]]
 name = "coverage"
-version = "7.4.1"
+version = "7.4.3"
 description = "Code coverage measurement for Python"
 optional = false
 python-versions = ">=3.8"
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 pathops = ["skia-pathops (>=0.5.0)"]
 plot = ["matplotlib"]
 repacker = ["uharfbuzz (>=0.23.0)"]
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@@ -1171,13 +1113,13 @@ testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs
 
 [[package]]
 name = "importlib-resources"
-version = "6.1.1"
+version = "6.1.2"
 description = "Read resources from Python packages"
 optional = false
 python-versions = ">=3.8"
 files = [
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 [package.dependencies]
@@ -1185,7 +1127,7 @@ zipp = {version = ">=3.1.0", markers = "python_version < \"3.10\""}
 
 [package.extras]
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 [[package]]
 name = "iniconfig"
@@ -1245,12 +1187,12 @@ i18n = ["Babel (>=2.7)"]
 
 [[package]]
 name = "jsbeautifier"
-version = "1.14.11"
+version = "1.15.1"
 description = "JavaScript unobfuscator and beautifier."
 optional = false
 python-versions = "*"
 files = [
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 [package.dependencies]
@@ -1349,19 +1291,20 @@ linkml-runtime = ">=1.1.24"
 
 [[package]]
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-version = "0.5.0"
+version = "0.6.4"
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-python-versions = ">=3.8,<4.0"
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 [package.dependencies]
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+curies = ">=0.6.0"
 lark = ">=1.1.2"
 linkml-runtime = ">=1.1.24"
+prefixmaps = ">=0.2.0,<0.3.0"
 
 [[package]]
 name = "kiwisolver"
@@ -1512,13 +1455,13 @@ pydantic = "*"
 
 [[package]]
 name = "linkml-runtime"
-version = "1.6.3"
+version = "1.7.2"
 description = "Runtime environment for LinkML, the Linked open data modeling language"
 optional = false
-python-versions = ">=3.7.6,<4.0.0"
+python-versions = ">=3.8,<4.0"
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 ]
 
 [package.dependencies]
@@ -1718,39 +1661,39 @@ files = [
 
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+version = "3.8.3"
 description = "Python plotting package"
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 python-versions = ">=3.9"
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 class-resolver = ">=0.4.2"
 click = "*"
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 linkml-runtime = ">=1.5.3"
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 ontoportal-client = ">=0.0.3"
 prefixmaps = ">=0.1.2"
 pronto = ">=2.5.0"
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 requests-cache = ">=1.0.1,<2.0.0"
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 SQLAlchemy = ">=1.4.32"
-sssom = ">=0.3.31"
-sssom-schema = ">=0.11.0"
+sssom = ">=0.4.0,<0.5.0"
 
 [package.extras]
 gilda = ["gilda (>=1.0.0)", "urllib3 (<2)"]
+llm = ["llm"]
 
 [[package]]
 name = "ols-client"
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 plot = ["matplotlib (>=3.6.3)"]
 postgresql = ["SQLAlchemy (>=2.0.0)", "adbc-driver-postgresql (>=0.8.0)", "psycopg2 (>=2.9.6)"]
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@@ -2187,17 +2130,17 @@ xml = ["lxml (>=4.9.2)"]
 
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+version = "0.3.8"
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 [package.dependencies]
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 [package.dependencies]
@@ -2576,13 +2512,13 @@ jsonasobj = ">=1.2.1"
 
 [[package]]
 name = "pymdown-extensions"
-version = "10.7"
+version = "10.7.1"
 description = "Extension pack for Python Markdown."
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
@@ -2594,37 +2530,18 @@ extra = ["pygments (>=2.12)"]
 
 [[package]]
 name = "pyparsing"
-version = "3.1.1"
+version = "3.1.2"
 description = "pyparsing module - Classes and methods to define and execute parsing grammars"
 optional = false
 python-versions = ">=3.6.8"
 files = [
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 [package.extras]
 diagrams = ["jinja2", "railroad-diagrams"]
 
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-name = "pyproject-api"
-version = "1.6.1"
-description = "API to interact with the python pyproject.toml based projects"
-optional = false
-python-versions = ">=3.8"
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-
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-
 [[package]]
 name = "pysolr"
 version = "3.9.0"
@@ -2643,13 +2560,13 @@ solrcloud = ["kazoo (>=2.5.0)"]
 
 [[package]]
 name = "pystow"
-version = "0.5.2"
+version = "0.5.3"
 description = "Easily pick a place to store data for your python package."
 optional = false
 python-versions = ">=3.7"
 files = [
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 ]
 
 [package.dependencies]
@@ -2737,13 +2654,13 @@ dev = ["pre-commit", "pytest-asyncio", "tox"]
 
 [[package]]
 name = "python-dateutil"
-version = "2.8.2"
+version = "2.9.0.post0"
 description = "Extensions to the standard Python datetime module"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
 files = [
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@@ -3046,13 +2964,13 @@ use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"]
 
 [[package]]
 name = "requests-cache"
-version = "1.1.1"
+version = "1.2.0"
 description = "A persistent cache for python requests"
 optional = false
-python-versions = ">=3.7,<4.0"
+python-versions = ">=3.8"
 files = [
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 [package.dependencies]
@@ -3064,15 +2982,15 @@ url-normalize = ">=1.4"
 urllib3 = ">=1.25.5"
 
 [package.extras]
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 mongodb = ["pymongo (>=3)"]
 redis = ["redis (>=3)"]
 security = ["itsdangerous (>=2.0)"]
-yaml = ["pyyaml (>=5.4)"]
+yaml = ["pyyaml (>=6.0.1)"]
 
 [[package]]
 name = "requests-toolbelt"
@@ -3101,110 +3019,110 @@ files = [
 
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@@ -3251,46 +3169,46 @@ test = ["asv", "gmpy2", "hypothesis", "mpmath", "pooch", "pytest", "pytest-cov",
 
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 [[package]]
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 [[package]]
 name = "sssom"
-version = "0.4.3"
+version = "0.4.4"
 description = "Operations on SSSOM mapping tables"
 optional = false
 python-versions = ">=3.8,<4.0"
 files = [
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+    {file = "sssom-0.4.4.tar.gz", hash = "sha256:9395c5614f2d1ff321450100d5448388642dccca6060dd8c03a5664d227da7b0"},
 ]
 
 [package.dependencies]
 click = ">=8.1.6"
 curies = ">=0.7.3"
 deprecation = ">=2.1.0,<3.0.0"
+importlib-resources = ">=6.1.1,<7.0.0"
 linkml-runtime = ">=1.5.5"
 networkx = {version = ">=3.1", extras = ["networkx"]}
 pandas = ">1.0.3"
@@ -3736,42 +3655,15 @@ files = [
     {file = "tomli-2.0.1.tar.gz", hash = "sha256:de526c12914f0c550d15924c62d72abc48d6fe7364aa87328337a31007fe8a4f"},
 ]
 
-[[package]]
-name = "tox"
-version = "4.12.1"
-description = "tox is a generic virtualenv management and test command line tool"
-optional = false
-python-versions = ">=3.8"
-files = [
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-    {file = "tox-4.12.1.tar.gz", hash = "sha256:61aafbeff1bd8a5af84e54ef6e8402f53c6a6066d0782336171ddfbf5362122e"},
-]
-
-[package.dependencies]
-cachetools = ">=5.3.2"
-chardet = ">=5.2"
-colorama = ">=0.4.6"
-filelock = ">=3.13.1"
-packaging = ">=23.2"
-platformdirs = ">=4.1"
-pluggy = ">=1.3"
-pyproject-api = ">=1.6.1"
-tomli = {version = ">=2.0.1", markers = "python_version < \"3.11\""}
-virtualenv = ">=20.25"
-
-[package.extras]
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-
 [[package]]
 name = "tqdm"
-version = "4.66.1"
+version = "4.66.2"
 description = "Fast, Extensible Progress Meter"
 optional = false
 python-versions = ">=3.7"
 files = [
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 ]
 
 [package.dependencies]
@@ -3785,24 +3677,24 @@ telegram = ["requests"]
 
 [[package]]
 name = "typing-extensions"
-version = "4.9.0"
+version = "4.10.0"
 description = "Backported and Experimental Type Hints for Python 3.8+"
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [[package]]
 name = "tzdata"
-version = "2023.4"
+version = "2024.1"
 description = "Provider of IANA time zone data"
 optional = false
 python-versions = ">=2"
 files = [
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+    {file = "tzdata-2024.1.tar.gz", hash = "sha256:2674120f8d891909751c38abcdfd386ac0a5a1127954fbc332af6b5ceae07efd"},
 ]
 
 [[package]]
@@ -3821,13 +3713,13 @@ six = "*"
 
 [[package]]
 name = "urllib3"
-version = "2.2.0"
+version = "2.2.1"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.extras]
@@ -3858,60 +3750,42 @@ testing = ["pytest (>=7.4.0)"]
 tooling = ["black (>=23.7.0)", "pyright (>=1.1.325)", "ruff (>=0.0.287)"]
 tooling-extras = ["pyaml (>=23.7.0)", "pypandoc-binary (>=1.11)", "pytest (>=7.4.0)"]
 
-[[package]]
-name = "virtualenv"
-version = "20.25.0"
-description = "Virtual Python Environment builder"
-optional = false
-python-versions = ">=3.7"
-files = [
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-
-[package.dependencies]
-distlib = ">=0.3.7,<1"
-filelock = ">=3.12.2,<4"
-platformdirs = ">=3.9.1,<5"
-
-[package.extras]
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-
 [[package]]
 name = "watchdog"
-version = "3.0.0"
+version = "4.0.0"
 description = "Filesystem events monitoring"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
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 ]
 
 [package.extras]
@@ -4017,4 +3891,4 @@ docs = ["sphinx", "sphinx-copybutton", "sphinx-rtd-theme"]
 [metadata]
 lock-version = "2.0"
 python-versions = "^3.9"
-content-hash = "ce98ced34046e3442f80b0d7eb6231ded58d18b8a2bbb59a40bc872cd5791c70"
+content-hash = "56e55e680b81060117aa05a38e8a208f5d0f9847f91b79b68799851653e5443d"
diff --git a/pyproject.toml b/pyproject.toml
index 3598ef1..e9447fb 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pandasaurus-cxg"
-version = "0.1.8"
+version = "0.1.9"
 description = "Ontology enrichment tool for CxG standard AnnData files."
 authors = ["Ugur Bayindir <ugur@ebi.ac.uk>"]
 license = "http://www.apache.org/licenses/LICENSE-2.0"
@@ -12,9 +12,9 @@ python = "^3.9"
 pandas = "^2.0.2"
 anndata = "^0.9.1"
 rdflib = "^6.3.2"
-oaklib = "0.5.13"
+oaklib = "0.5.25"
 matplotlib = "^3.7.2"
-pandasaurus = "^0.3.6"
+pandasaurus = "^0.3.8"
 pygraphviz = "^1.11"
 sphinx = { version = "^7.2.6", optional = true }
 sphinx-rtd-theme = { version = "^1.3.0", optional = true }