diff --git a/_sources/datamodels/mapping-rules/MappingRule.md.txt b/_sources/datamodels/mapping-rules/MappingRule.md.txt index 139d2a531..98c5750ae 100644 --- a/_sources/datamodels/mapping-rules/MappingRule.md.txt +++ b/_sources/datamodels/mapping-rules/MappingRule.md.txt @@ -112,6 +112,7 @@ attributes: rank: 1000 domain_of: - MappingRule + - Synonymizer oneway: name: oneway description: if true then subject and object can be switched and predicate inverted @@ -167,6 +168,7 @@ attributes: owner: MappingRule domain_of: - MappingRule + - Synonymizer range: string oneway: name: oneway diff --git a/_sources/datamodels/mapping-rules/MappingRuleCollection.md.txt b/_sources/datamodels/mapping-rules/MappingRuleCollection.md.txt index 82205a517..de8baa4f6 100644 --- a/_sources/datamodels/mapping-rules/MappingRuleCollection.md.txt +++ b/_sources/datamodels/mapping-rules/MappingRuleCollection.md.txt @@ -93,6 +93,7 @@ attributes: multivalued: true domain_of: - MappingRuleCollection + - RuleSet range: MappingRule inlined: true minimum_confidence: @@ -125,6 +126,7 @@ attributes: owner: MappingRuleCollection domain_of: - MappingRuleCollection + - RuleSet range: MappingRule inlined: true minimum_confidence: diff --git a/_sources/datamodels/mapping-rules/RegularExpressionString.md.txt b/_sources/datamodels/mapping-rules/RegularExpressionString.md.txt new file mode 100644 index 000000000..ec424dbc9 --- /dev/null +++ b/_sources/datamodels/mapping-rules/RegularExpressionString.md.txt @@ -0,0 +1,34 @@ +# Type: RegularExpressionString + + + +URI: [xsd:string](http://www.w3.org/2001/XMLSchema#string) + +* [base](https://w3id.org/linkml/base): str + +* [uri](https://w3id.org/linkml/uri): xsd:string + + +* [typeof](https://w3id.org/linkml/typeof): string + + + + + + + +## Identifier and Mapping Information + + + + + + + +### Schema Source + + +* from schema: https://w3id.org/oak/mapping-rules-datamodel + + + diff --git a/_sources/datamodels/mapping-rules/RuleSet.md.txt b/_sources/datamodels/mapping-rules/RuleSet.md.txt new file mode 100644 index 000000000..e8bdc9c5f --- /dev/null +++ b/_sources/datamodels/mapping-rules/RuleSet.md.txt @@ -0,0 +1,142 @@ +# Class: RuleSet + + +_A set of rules for generating synonyms or alternate lexical elements._ + + + + + +URI: [mappingrules:RuleSet](https://w3id.org/oak/mapping-rules-datamodel/RuleSet) + + + + +```{mermaid} + classDiagram + class RuleSet + RuleSet : prefix + + RuleSet : rules + + RuleSet --> Synonymizer : rules + + +``` + + + + + + + +## Slots + +| Name | Cardinality and Range | Description | Inheritance | +| --- | --- | --- | --- | +| [rules](rules.md) | 0..*
[Synonymizer](Synonymizer.md) | A list of rules for generating synonyms or alternate lexical elements | direct | +| [prefix](prefix.md) | 0..1
[String](String.md) | The prefix that qualifies for the rule | direct | + + + + + + + + + +## Identifier and Mapping Information + + + + + + + +### Schema Source + + +* from schema: https://w3id.org/oak/mapping-rules-datamodel + + + + + +## Mappings + +| Mapping Type | Mapped Value | +| --- | --- | +| self | mappingrules:RuleSet | +| native | mappingrules:RuleSet | + + + + + +## LinkML Source + + + +### Direct + +
+```yaml +name: RuleSet +description: A set of rules for generating synonyms or alternate lexical elements. +from_schema: https://w3id.org/oak/mapping-rules-datamodel +attributes: + rules: + name: rules + description: A list of rules for generating synonyms or alternate lexical elements. + from_schema: https://w3id.org/oak/synonymizer-datamodel + multivalued: true + domain_of: + - MappingRuleCollection + - RuleSet + range: Synonymizer + prefix: + name: prefix + description: The prefix that qualifies for the rule. + from_schema: https://w3id.org/oak/synonymizer-datamodel + domain_of: + - Synonymizer + - Test + - RuleSet + range: string + +``` +
+ +### Induced + +
+```yaml +name: RuleSet +description: A set of rules for generating synonyms or alternate lexical elements. +from_schema: https://w3id.org/oak/mapping-rules-datamodel +attributes: + rules: + name: rules + description: A list of rules for generating synonyms or alternate lexical elements. + from_schema: https://w3id.org/oak/synonymizer-datamodel + multivalued: true + alias: rules + owner: RuleSet + domain_of: + - MappingRuleCollection + - RuleSet + range: Synonymizer + prefix: + name: prefix + description: The prefix that qualifies for the rule. + from_schema: https://w3id.org/oak/synonymizer-datamodel + alias: prefix + owner: RuleSet + domain_of: + - Synonymizer + - Test + - RuleSet + range: string + +``` +
\ No newline at end of file diff --git a/_sources/datamodels/mapping-rules/Synonymizer.md.txt b/_sources/datamodels/mapping-rules/Synonymizer.md.txt index 73ecd0b4e..7979b5787 100644 --- a/_sources/datamodels/mapping-rules/Synonymizer.md.txt +++ b/_sources/datamodels/mapping-rules/Synonymizer.md.txt @@ -10,6 +10,8 @@ URI: [mappingrules:Synonymizer](https://w3id.org/oak/mapping-rules-datamodel/Syn ```{mermaid} classDiagram class Synonymizer + Synonymizer : description + Synonymizer : match Synonymizer : match_scope @@ -24,8 +26,6 @@ URI: [mappingrules:Synonymizer](https://w3id.org/oak/mapping-rules-datamodel/Syn Synonymizer --> Test : tests - Synonymizer : the_rule - ``` @@ -39,7 +39,7 @@ URI: [mappingrules:Synonymizer](https://w3id.org/oak/mapping-rules-datamodel/Syn | Name | Cardinality and Range | Description | Inheritance | | --- | --- | --- | --- | -| [the_rule](the_rule.md) | 0..1
[String](String.md) | Description of the rule | direct | +| [description](description.md) | 0..1
[String](String.md) | Description of the rule | direct | | [match](match.md) | 0..1
[String](String.md) | Reg-ex rule to match substrings in labels | direct | | [match_scope](match_scope.md) | 0..1
[String](String.md) | Scope of the reg-ex rule | direct | | [replacement](replacement.md) | 0..1
[String](String.md) | Reg-ex rule to replace substrings in labels | direct | @@ -56,6 +56,7 @@ URI: [mappingrules:Synonymizer](https://w3id.org/oak/mapping-rules-datamodel/Syn | used by | used in | type | used | | --- | --- | --- | --- | | [MappingRule](MappingRule.md) | [synonymizer](synonymizer.md) | range | [Synonymizer](Synonymizer.md) | +| [RuleSet](RuleSet.md) | [rules](rules.md) | range | [Synonymizer](Synonymizer.md) | @@ -101,12 +102,12 @@ URI: [mappingrules:Synonymizer](https://w3id.org/oak/mapping-rules-datamodel/Syn name: Synonymizer from_schema: https://w3id.org/oak/mapping-rules-datamodel attributes: - the_rule: - name: the_rule + description: + name: description description: Description of the rule. from_schema: https://w3id.org/oak/mapping-rules-datamodel - rank: 1000 domain_of: + - MappingRule - Synonymizer range: string match: @@ -149,6 +150,7 @@ attributes: domain_of: - Synonymizer - Test + - RuleSet range: string tests: name: tests @@ -169,14 +171,14 @@ attributes: name: Synonymizer from_schema: https://w3id.org/oak/mapping-rules-datamodel attributes: - the_rule: - name: the_rule + description: + name: description description: Description of the rule. from_schema: https://w3id.org/oak/mapping-rules-datamodel - rank: 1000 - alias: the_rule + alias: description owner: Synonymizer domain_of: + - MappingRule - Synonymizer range: string match: @@ -229,6 +231,7 @@ attributes: domain_of: - Synonymizer - Test + - RuleSet range: string tests: name: tests diff --git a/_sources/datamodels/mapping-rules/Test.md.txt b/_sources/datamodels/mapping-rules/Test.md.txt index 0f513e494..8750f9612 100644 --- a/_sources/datamodels/mapping-rules/Test.md.txt +++ b/_sources/datamodels/mapping-rules/Test.md.txt @@ -108,6 +108,7 @@ attributes: domain_of: - Synonymizer - Test + - RuleSet ``` @@ -148,6 +149,7 @@ attributes: domain_of: - Synonymizer - Test + - RuleSet range: string ``` diff --git a/_sources/datamodels/mapping-rules/description.md.txt b/_sources/datamodels/mapping-rules/description.md.txt index ee0e73c71..1b4c63976 100644 --- a/_sources/datamodels/mapping-rules/description.md.txt +++ b/_sources/datamodels/mapping-rules/description.md.txt @@ -14,6 +14,7 @@ URI: [mappingrules:description](https://w3id.org/oak/mapping-rules-datamodel/des | Name | Description | Modifies Slot | | --- | --- | --- | [MappingRule](MappingRule.md) | An individual mapping rule, if preconditions match the postconditions are app... | no | +[Synonymizer](Synonymizer.md) | | no | @@ -37,25 +38,16 @@ URI: [mappingrules:description](https://w3id.org/oak/mapping-rules-datamodel/des -### Schema Source - - -* from schema: https://w3id.org/oak/mapping-rules-datamodel - - - ## LinkML Source
```yaml name: description -from_schema: https://w3id.org/oak/mapping-rules-datamodel -rank: 1000 alias: description -owner: MappingRule domain_of: - MappingRule +- Synonymizer range: string ``` diff --git a/_sources/datamodels/mapping-rules/index.md.txt b/_sources/datamodels/mapping-rules/index.md.txt index fbcf02945..8c8096adb 100644 --- a/_sources/datamodels/mapping-rules/index.md.txt +++ b/_sources/datamodels/mapping-rules/index.md.txt @@ -1,6 +1,6 @@ # Mapping Rules Datamodel -A datamodel for specifying lexical mapping rules. +A datamodel for specifying lexical mapping rules URI: https://w3id.org/oak/mapping-rules-datamodel @@ -23,6 +23,7 @@ Name: mapping-rules-datamodel | [Postcondition](Postcondition.md) | None | | [Precondition](Precondition.md) | A pattern to be matched against an individual SSSOM mapping | | [RelationshipToTerm](RelationshipToTerm.md) | A relationship of an ontology element to a lexical term | +| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements. | | [Synonymizer](Synonymizer.md) | None | | [Test](Test.md) | None | @@ -66,7 +67,6 @@ Name: mapping-rules-datamodel | [synonymizer](synonymizer.md) | Normalizing rules to labels | | [term](term.md) | A normalized term that groups ontology elements | | [tests](tests.md) | Unit tests for each rules | -| [the_rule](the_rule.md) | Description of the rule | | [transformations](transformations.md) | | | [transformations_included_in](transformations_included_in.md) | | | [type](type.md) | The type of transformation | @@ -98,6 +98,7 @@ Name: mapping-rules-datamodel | [Ncname](Ncname.md) | Prefix part of CURIE | | [Nodeidentifier](Nodeidentifier.md) | A URI, CURIE or BNODE that represents a node in a model | | [Objectidentifier](Objectidentifier.md) | A URI or CURIE that represents an object in the model | +| [RegularExpressionString](RegularExpressionString.md) | | | [Sparqlpath](Sparqlpath.md) | A string encoding a SPARQL Property Path | | [String](String.md) | A character string | | [Time](Time.md) | A time object represents a (local) time of day, independent of any particular... | diff --git a/_sources/datamodels/mapping-rules/mapping-rules-datamodel.md.txt b/_sources/datamodels/mapping-rules/mapping-rules-datamodel.md.txt index 91d00b3ec..ebfb11600 100644 --- a/_sources/datamodels/mapping-rules/mapping-rules-datamodel.md.txt +++ b/_sources/datamodels/mapping-rules/mapping-rules-datamodel.md.txt @@ -1,6 +1,6 @@ # mapping-rules-datamodel -A datamodel for specifying lexical mapping rules. +A datamodel for specifying lexical mapping rules URI: https://w3id.org/oak/mapping-rules-datamodel diff --git a/_sources/datamodels/mapping-rules/prefix.md.txt b/_sources/datamodels/mapping-rules/prefix.md.txt index 15feaa8e7..344ab5063 100644 --- a/_sources/datamodels/mapping-rules/prefix.md.txt +++ b/_sources/datamodels/mapping-rules/prefix.md.txt @@ -15,6 +15,7 @@ URI: [mappingrules:prefix](https://w3id.org/oak/mapping-rules-datamodel/prefix) | --- | --- | --- | [Synonymizer](Synonymizer.md) | | no | [Test](Test.md) | | no | +[RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements | no | @@ -48,6 +49,7 @@ alias: prefix domain_of: - Synonymizer - Test +- RuleSet range: string ``` diff --git a/_sources/datamodels/mapping-rules/rules.md.txt b/_sources/datamodels/mapping-rules/rules.md.txt index 74d72f53a..eb0671fa7 100644 --- a/_sources/datamodels/mapping-rules/rules.md.txt +++ b/_sources/datamodels/mapping-rules/rules.md.txt @@ -1,10 +1,5 @@ # Slot: rules - -_all rules_ - - - URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules) @@ -19,6 +14,7 @@ URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules) | Name | Description | Modifies Slot | | --- | --- | --- | [MappingRuleCollection](MappingRuleCollection.md) | A collection of mapping rules | no | +[RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements | no | @@ -28,9 +24,7 @@ URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules) ## Properties -* Range: [MappingRule](MappingRule.md) - -* Multivalued: True +* Range: [String](String.md) @@ -44,29 +38,17 @@ URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules) -### Schema Source - - -* from schema: https://w3id.org/oak/mapping-rules-datamodel - - - ## LinkML Source
```yaml name: rules -description: all rules -from_schema: https://w3id.org/oak/mapping-rules-datamodel -rank: 1000 -multivalued: true alias: rules -owner: MappingRuleCollection domain_of: - MappingRuleCollection -range: MappingRule -inlined: true +- RuleSet +range: string ```
\ No newline at end of file diff --git a/_sources/datamodels/mapping-rules/the_rule.md.txt b/_sources/datamodels/mapping-rules/the_rule.md.txt deleted file mode 100644 index 9ed84b67a..000000000 --- a/_sources/datamodels/mapping-rules/the_rule.md.txt +++ /dev/null @@ -1,68 +0,0 @@ -# Slot: the_rule - - -_Description of the rule._ - - - -URI: [mappingrules:the_rule](https://w3id.org/oak/mapping-rules-datamodel/the_rule) - - - - - - - - -## Applicable Classes - -| Name | Description | Modifies Slot | -| --- | --- | --- | -[Synonymizer](Synonymizer.md) | | no | - - - - - - - -## Properties - -* Range: [String](String.md) - - - - - -## Identifier and Mapping Information - - - - - - - -### Schema Source - - -* from schema: https://w3id.org/oak/mapping-rules-datamodel - - - - -## LinkML Source - -
-```yaml -name: the_rule -description: Description of the rule. -from_schema: https://w3id.org/oak/mapping-rules-datamodel -rank: 1000 -alias: the_rule -owner: Synonymizer -domain_of: -- Synonymizer -range: string - -``` -
\ No newline at end of file diff --git a/_sources/packages/src/oaklib.utilities.lexical.lexical_indexer.rst.txt b/_sources/packages/src/oaklib.utilities.lexical.lexical_indexer.rst.txt index c443cd6e4..c83d4d25e 100644 --- a/_sources/packages/src/oaklib.utilities.lexical.lexical_indexer.rst.txt +++ b/_sources/packages/src/oaklib.utilities.lexical.lexical_indexer.rst.txt @@ -14,7 +14,6 @@ .. autosummary:: add_labels_from_uris - apply_synonymizer apply_transformation create_lexical_index create_mapping diff --git a/cli.html b/cli.html index a0579cca8..f5558bb64 100644 --- a/cli.html +++ b/cli.html @@ -88,6 +88,7 @@
  • fill-table
  • generate-definitions
  • generate-disjoints
    • +
  • generate-lexical-replacements
  • generate-logical-definitions
  • generate-synonyms
  • info
    • @@ -2670,6 +2671,93 @@
    Example:<

    Optional argument(s)

    + + +
    +

    generate-lexical-replacements

    +

    Generate lexical replacements based on a set of synonymizer rules.

    +

    If the –apply-patch flag is set, the output will be an ontology file with the changes +applied. Pass the –patch argument to lso get the patch file in KGCL format.

    +
    +
    Example:
    +
    +

    runoak -i foo.obo generate-lexical-replacements -R foo_rules.yaml –patch patch.kgcl –apply-patch -o foo_syn.obo

    +
    +

    If the apply-patch flag is NOT set then the main input will be KGCL commands

    +
    +
    +
    Example:
    +
    +

    runoak -i foo.obo generate-lexical-replacements -R foo_rules.yaml -o changes.kgcl

    +
    +

    You can also pass the expressions directly as YAML

    +
    +
    +
    Example:
    +
    +

    runoak -i foo.obo generate-lexical-replacements -Y ‘{match: “nuclear (w+)”, replacement: “1 nucleus”}’ .all

    +
    +

    see https://github.com/INCATools/kgcl.

    +

    Note: this command is very similar to generate-synonyms, but the main use case here +is replacing terms, and applying rules to other elements such as definitions

    +
    runoak generate-lexical-replacements [OPTIONS] [TERMS]...
+
    +
    +

    Options

    +
    +
    +-R, --rules-file <rules_file>
    +

    path to rules file. Conforms to rules_datamodel. e.g. https://github.com/INCATools/ontology-access-kit/blob/main/tests/input/matcher_rules.yaml

    +
    + +
    +
    +-Y, --rules-expression <rules_expression>
    +

    YAML encoding of a rules expression

    +
    + +
    +
    +--apply-patch, --no-apply-patch
    +

    Apply KGCL syntax generated based on the synonymizer rules file.

    +
    +
    Default:
    +

    False

    +
    +
    +
    + +
    +
    +--patch <patch>
    +

    Path to where patch file will be written.

    +
    + +
    +
    +--patch-format <patch_format>
    +

    Output syntax for patches.

    +
    + +
    +
    +-o, --output <output>
    +

    Output file, e.g. obo file

    +
    + +
    +
    +-O, --output-type <output_type>
    +

    Desired output type

    +
    + +

    Arguments

    +
    +
    +TERMS
    +

    Optional argument(s)

    +
    +
    @@ -2776,15 +2864,15 @@

    generate-synonymsGenerate synonyms based on a set of synonymizer rules.

    If the –apply-patch flag is set, the output will be an ontology file with the changes applied. Pass the –patch argument to lso get the patch file in KGCL format.

    -
    -
    Example:
    +
    +
    Example:

    runoak -i foo.obo generate-synonyms -R foo_rules.yaml –patch patch.kgcl –apply-patch -o foo_syn.obo

    If the apply-patch flag is NOT set then the main input will be KGCL commands

    -
    -
    Example:
    +
    +
    Example:

    runoak -i foo.obo generate-synonyms -R foo_rules.yaml -o changes.kgcl

    @@ -2846,8 +2934,8 @@
    Example:<

    info

    Show information on term or set of terms

    -
    -
    Example:
    +
    +
    Example:

    runoak -i sqlite:obo:cl info CL:4023094

    @@ -2919,8 +3007,8 @@
    Example:<

    information-content

    Show information content for term or list of terms

    -
    -
    Example:
    +
    +
    Example:

    runoak -i cl.db information-content -p i .all

    @@ -2977,15 +3065,15 @@
    Example:<

    labels

    Show labels for term or list of terms

    -
    -
    Example:
    +
    +
    Example:

    runoak -i cl.owl labels CL:4023093 CL:4023094

    You can use the “.all” selector to show all labels:

    -
    -
    Example:
    +
    +
    Example:

    runoak -i cl.owl labels .all

    @@ -2999,15 +3087,15 @@
    Example:< (currently only SQL) and the ontology has multilingual support, you can restrict results to a particular language.

    -
    -
    Example:
    +
    +
    Example:

    runoak –preferred-language fr -i sqlite:obo:hpinternational labels .ancestors HP:0020110

    You can also query for all languages, and see these pivoted:

    -
    -
    Example:
    +
    +
    Example:

    runoak -i sqlite:obo:hpinternational labels .ancestors HP:0020110 –pivot-languages

    @@ -3083,8 +3171,8 @@
    Example:<

    languages

    Show available languages

    -
    -
    Example:
    +
    +
    Example:

    runoak languages

    @@ -3098,8 +3186,8 @@

    leafsList all leaf nodes in the ontology

    Like all OAK relational commands, this is parameterized by –predicates (-p). Note that the default is to return the roots of the relation graph over all predicates

    -
    -
    Example:
    +
    +
    Example:

    runoak -i db/cob.db leafs

    @@ -3256,8 +3344,8 @@

    lint in labels and definitions.

    The output is a list of changes, in a KCGL-compliant syntax.

    By default, changes will be applied

    -
    -
    Example:
    +
    +
    Example:

    runoak -i my.obo lint

    @@ -3337,8 +3425,8 @@

    logical-definitions

    You can also specify CSV to generate a flattened form of this.

    -
    -
    Example:
    +
    +
    Example:

    pato logical-definitions .all –output-type csv

    @@ -3346,15 +3434,15 @@
    Example:< This is a comma-separated pair of axes, where each element is a logical definition element type: “f” for filler, “p” for predicate, “g” for genus, “d” for defined class.

    -
    -
    Example:
    +
    +
    Example:

    • Each property/predicate is a column

    • For repeated properties, columns of the form prop_1, prop_2, … are generated

    -
    -
    Example:
    +
    +
    Example:

    pato logical-definitions .all –matrix-axes d,p –output-type csv

    @@ -3455,8 +3543,8 @@
    Example:<

    mappings

    List all mappings encoded in the ontology

    -
    -
    Example:
    +
    +
    Example:

    runoak -i sqlite:obo:envo mappings

    @@ -3535,8 +3623,8 @@

    migrate-curies -
    Example:
    +
    +
    Example:

    runoak -i db/uberon.db migrate-curies –replace SRC1=TGT1 SRC2=TGT2

    @@ -3584,8 +3672,8 @@
    Example:<

    normalize

    Normalize all input identifiers.

    -
    -
    Example:
    +
    +
    Example:

    runoak -i translator: normalize HGNC:1 HGNC:2 -M NCBIGene

    @@ -3642,29 +3730,29 @@
    Example:<

    obsoletes

    Shows all obsolete entities.

    -
    -
    Example:
    +
    +
    Example:

    runoak -i obolibrary:go.obo obsoletes

    To exclude merged terms, use the --no-include-merged flag

    -
    -
    Example:
    +
    +
    Example:

    runoak -i obolibrary:go.obo obsoletes –no-include-merged

    To show migration relationships, use the --show-migration-relationships flag

    -
    -
    Example:
    +
    +
    Example:

    runoak -i obolibrary:go.obo obsoletes –show-migration-relationships

    You can also specify terms to show obsoletes for:

    -
    -
    Example:
    +
    +
    Example:

    runoak -i obolibrary:go.obo obsoletes –show-migration-relationships GO:0000187 GO:0000188

    @@ -3756,22 +3844,22 @@

    ontologies

    ontology-metadata

    Shows ontology metadata

    -
    -
    Example:
    +
    +
    Example:

    runoak -i bioportal: ontology-metadata obi uberon foodon

    Use the --all option to show all ontologies

    -
    -
    Example:
    +
    +
    Example:

    runoak -i bioportal: ontology-metadata –all

    By default the output is YAML. You can get the results as TSV:

    -
    -
    Example:
    +
    +
    Example:

    runoak -i bioportal: ontology-metadata –all -O csv

    @@ -3823,8 +3911,8 @@
    Example:<

    ontology-versions

    Shows ontology versions

    Currently only implemented for BioPortal

    -
    -
    Example:
    +
    +
    Example:

    runoak -i bioportal: ontology-versions mp

    @@ -3869,22 +3957,22 @@
    Example:<

    paths

    List all paths between one or more start curies.

    -
    -
    Example:
    +
    +
    Example:

    runoak -i sqlite:obo:go paths -p i,p ‘nuclear membrane’

    This shows all shortest paths from nuclear membrane to all ancestors

    -
    -
    Example:
    +
    +
    Example:

    runoak -i sqlite:obo:go paths -p i,p ‘nuclear membrane’ –target cytoplasm

    This shows shortest paths between two nodes

    -
    -
    Example:
    +
    +
    Example:

    runoak -i sqlite:obo:go paths -p i,p ‘nuclear membrane’ ‘thylakoid’ –target cytoplasm ‘thylakoid membrane’

    @@ -3897,8 +3985,8 @@
    Example:<

    You can also pass in weights for each predicate, used when calculating shortest paths.

    -
    -
    Example:
    +
    +
    Example:

    runoak -i sqlite:obo:go paths -p i,p ‘nuclear membrane’ –target cytoplasm –predicate-weights “{i: 0.0001, p: 999}”

    @@ -3906,8 +3994,8 @@
    Example:<

    (Note: you can use the same shorthands as in the –predicates option)

    This command can be combined with others to visualize the paths.

    -
    -
    Example:
    +
    +
    Example:

    alias go=”runoak -i sqlite:obo:go” go paths -p i,p ‘nuclear membrane’ –target cytoplasm –narrow | go viz –fill-gaps -

    @@ -4016,7 +4104,7 @@
    Example:<
    -C, --configure <configure>
    -

    overrides for stylemap, specified as yaml. E.g. `-C “styles: [filled, rounded]” `

    +

    overrides for stylemap, specified as yaml. E.g. `-C “styles: [filled, rounded]” `

    @@ -4059,7 +4147,7 @@

    prefixeshttp://purl.obolibrary.org/obo/CL_> . +

    @prefix CL: <http://purl.obolibrary.org/obo/CL_> . … [] a sh:PrefixDeclaration ;

    @@ -4069,8 +4157,8 @@

    prefixes -
    Example:
    +
    +
    Example:

    runoak –named-prefix-map prefixcc prefixes

    @@ -4168,29 +4256,29 @@

    queryrelationships

    Show all relationships for a term or terms

    By default, this shows all relationships where the input term(s) are the subjects

    -
    -
    Example:
    +
    +
    Example:

    runoak -i cl.db relationships CL:4023094

    Like all OAK commands, a label can be passed instead of a CURIE

    -
    -
    Example:
    +
    +
    Example:

    runoak -i cl.db relationships neuron

    To reverse the direction, and query where the search term(s) are objects, use the –direction flag:

    -
    -
    Example:
    +
    +
    Example:

    runoak -i cl.db relationships –direction down neuron

    Multiple terms can be passed

    -
    -
    Example:
    +
    +
    Example:

    runoak -i uberon.db relationships heart liver lung

    @@ -4330,8 +4418,8 @@

    rollup -
    Example:
    +
    +
    Example:

    runoak -i sqlite:go.db -g wb.gaf -G gaf rollup –object-group GO:0032502,GO:0007568,GO:0048869,GO:0098727 –object-group GO:0008152,GO:0009056,GO:0044238,GO:1901275 –object-group GO:0050896,GO:0051716,GO:0051606,GO:0051606,GO:0014823 –object-group=GO:0023052 –output rollup.html WB:WBGene00000417 WB:WBGene00000912 WB:WBGene00000898 WB:WBGene00006752

    @@ -4392,8 +4480,8 @@

    rootsall predicates. This can sometimes give unintuitive results, so we recommend always being explicit and parameterizing

    -
    -
    Example:
    +
    +
    Example:

    runoak -i db/cob.db roots

    @@ -4446,8 +4534,8 @@
    Example:<

    -
    -
    Example:
    +
    +
    Example:

    runoak -i sqlite:cl.db viz CL:4023094

    @@ -6070,7 +6158,7 @@
    Example:
    -C, --configure <configure>
    -

    overrides for stylemap, specified as yaml. E.g. `-C “styles: [filled, rounded]” `

    +

    overrides for stylemap, specified as yaml. E.g. `-C “styles: [filled, rounded]” `

    diff --git a/datamodels/mapping-rules/MappingRule.html b/datamodels/mapping-rules/MappingRule.html index 4d0993209..39c436558 100644 --- a/datamodels/mapping-rules/MappingRule.html +++ b/datamodels/mapping-rules/MappingRule.html @@ -211,6 +211,7 @@

    Direct< rank: 1000 domain_of: - MappingRule + - Synonymizer oneway: name: oneway description: if true then subject and object can be switched and predicate inverted @@ -264,6 +265,7 @@

    Direct< owner: MappingRule domain_of: - MappingRule + - Synonymizer range: string oneway: name: oneway diff --git a/datamodels/mapping-rules/MappingRuleCollection.html b/datamodels/mapping-rules/MappingRuleCollection.html index fc2078df3..10148ca9e 100644 --- a/datamodels/mapping-rules/MappingRuleCollection.html +++ b/datamodels/mapping-rules/MappingRuleCollection.html @@ -168,6 +168,7 @@

    Direct< multivalued: true domain_of: - MappingRuleCollection + - RuleSet range: MappingRule inlined: true minimum_confidence: @@ -198,6 +199,7 @@

    Direct< owner: MappingRuleCollection domain_of: - MappingRuleCollection + - RuleSet range: MappingRule inlined: true minimum_confidence: diff --git a/datamodels/mapping-rules/the_rule.html b/datamodels/mapping-rules/RegularExpressionString.html similarity index 72% rename from datamodels/mapping-rules/the_rule.html rename to datamodels/mapping-rules/RegularExpressionString.html index be3159118..4c02d421a 100644 --- a/datamodels/mapping-rules/the_rule.html +++ b/datamodels/mapping-rules/RegularExpressionString.html @@ -4,7 +4,7 @@ - Slot: the_rule — oaklib documentation + Type: RegularExpressionString — oaklib documentation @@ -73,9 +73,9 @@
    @@ -83,34 +83,14 @@
    -
    -

    Slot: the_rule

    -

    Description of the rule.

    -

    URI: mappingrules:the_rule

    - -
    -

    Applicable Classes

    - - - - - - - - - - - - - -

    Name

    Description

    Modifies Slot

    Synonymizer

    no

    -
    -
    -

    Properties

    +
    +

    Type: RegularExpressionString

    +

    URI: xsd:string

    -

    Identifier and Mapping Information

    @@ -120,23 +100,6 @@

    Schema Source -

    LinkML Source

    -
    -```yaml -name: the_rule -description: Description of the rule. -from_schema: https://w3id.org/oak/mapping-rules-datamodel -rank: 1000 -alias: the_rule -owner: Synonymizer -domain_of: -- Synonymizer -range: string -
    </details>
-
    -
    -

    diff --git a/datamodels/mapping-rules/RuleSet.html b/datamodels/mapping-rules/RuleSet.html new file mode 100644 index 000000000..ca5a46762 --- /dev/null +++ b/datamodels/mapping-rules/RuleSet.html @@ -0,0 +1,248 @@ + + + + + + + Class: RuleSet — oaklib documentation + + + + + + + + + + + + + + + + + + + + +
    + + +
    + +
    +
    +
    + +
    +
    +
    +
    + +
    +

    Class: RuleSet

    +

    A set of rules for generating synonyms or alternate lexical elements.

    +

    URI: mappingrules:RuleSet

    +
    + classDiagram + class RuleSet + RuleSet : prefix + + RuleSet : rules + + RuleSet --> Synonymizer : rules + + +
    +
    +

    Slots

    + + + + + + + + + + + + + + + + + + + + +

    Name

    Cardinality and Range

    Description

    Inheritance

    rules

    0..*
    Synonymizer

    A list of rules for generating synonyms or alternate lexical elements

    direct

    prefix

    0..1
    String

    The prefix that qualifies for the rule

    direct

    +
    +
    +

    Identifier and Mapping Information

    +
    +

    Schema Source

    +
      +

    • from schema: https://w3id.org/oak/mapping-rules-datamodel

      • +
    +
    +
    +
    +

    Mappings

    + + + + + + + + + + + + + + +

    Mapping Type

    Mapped Value

    self

    mappingrules:RuleSet

    native

    mappingrules:RuleSet

    +
    +
    +

    LinkML Source

    + +
    +

    Direct

    +
    +```yaml +name: RuleSet +description: A set of rules for generating synonyms or alternate lexical elements. +from_schema: https://w3id.org/oak/mapping-rules-datamodel +attributes: + rules: + name: rules + description: A list of rules for generating synonyms or alternate lexical elements. + from_schema: https://w3id.org/oak/synonymizer-datamodel + multivalued: true + domain_of: + - MappingRuleCollection + - RuleSet + range: Synonymizer + prefix: + name: prefix + description: The prefix that qualifies for the rule. + from_schema: https://w3id.org/oak/synonymizer-datamodel + domain_of: + - Synonymizer + - Test + - RuleSet + range: string +
    </details>
+
+### Induced
+
+<details>
+```yaml
+name: RuleSet
+description: A set of rules for generating synonyms or alternate lexical elements.
+from_schema: https://w3id.org/oak/mapping-rules-datamodel
+attributes:
+  rules:
+    name: rules
+    description: A list of rules for generating synonyms or alternate lexical elements.
+    from_schema: https://w3id.org/oak/synonymizer-datamodel
+    multivalued: true
+    alias: rules
+    owner: RuleSet
+    domain_of:
+    - MappingRuleCollection
+    - RuleSet
+    range: Synonymizer
+  prefix:
+    name: prefix
+    description: The prefix that qualifies for the rule.
+    from_schema: https://w3id.org/oak/synonymizer-datamodel
+    alias: prefix
+    owner: RuleSet
+    domain_of:
+    - Synonymizer
+    - Test
+    - RuleSet
+    range: string
+
+
    +
    +
    +
    +
    + + +
    +
    +
    + +
    + +
    +

    © Copyright 2022-2024, OAK developers.

    +
    + + Built with Sphinx using a + theme + provided by Read the Docs. + + +
    +
    +
    +
    +
    + + + + \ No newline at end of file diff --git a/datamodels/mapping-rules/Synonymizer.html b/datamodels/mapping-rules/Synonymizer.html index f3bd9eb8e..208a8df24 100644 --- a/datamodels/mapping-rules/Synonymizer.html +++ b/datamodels/mapping-rules/Synonymizer.html @@ -89,6 +89,8 @@

    Class: Synonymizer classDiagram class Synonymizer + Synonymizer : description + Synonymizer : match Synonymizer : match_scope @@ -103,8 +105,6 @@

    Class: Synonymizer @@ -118,7 +118,7 @@

    Slots -

    the_rule

    +

    description

    0..1
    String

    Description of the rule

    direct

    @@ -172,6 +172,11 @@

    Usages<

    range

    Synonymizer

    +

    RuleSet

    +

    rules

    +

    range

    +

    Synonymizer

    +

    @@ -212,12 +217,12 @@

    Direct< name: Synonymizer from_schema: https://w3id.org/oak/mapping-rules-datamodel attributes: - the_rule: - name: the_rule + description: + name: description description: Description of the rule. from_schema: https://w3id.org/oak/mapping-rules-datamodel - rank: 1000 domain_of: + - MappingRule - Synonymizer range: string match: @@ -260,6 +265,7 @@

    Direct< domain_of: - Synonymizer - Test + - RuleSet range: string tests: name: tests @@ -278,14 +284,14 @@

    Direct< name: Synonymizer from_schema: https://w3id.org/oak/mapping-rules-datamodel attributes: - the_rule: - name: the_rule + description: + name: description description: Description of the rule. from_schema: https://w3id.org/oak/mapping-rules-datamodel - rank: 1000 - alias: the_rule + alias: description owner: Synonymizer domain_of: + - MappingRule - Synonymizer range: string match: @@ -338,6 +344,7 @@

    Direct< domain_of: - Synonymizer - Test + - RuleSet range: string tests: name: tests diff --git a/datamodels/mapping-rules/Test.html b/datamodels/mapping-rules/Test.html index eea65ab4b..bac17a21c 100644 --- a/datamodels/mapping-rules/Test.html +++ b/datamodels/mapping-rules/Test.html @@ -203,6 +203,7 @@

    Direct< domain_of: - Synonymizer - Test + - RuleSet 
    </details>
 
 ### Induced
@@ -241,6 +242,7 @@ 
    Direct<
     domain_of:
     - Synonymizer
     - Test
+    - RuleSet
     range: string
    diff --git a/datamodels/mapping-rules/description.html b/datamodels/mapping-rules/description.html index c54bea8c9..b945b1c98 100644 --- a/datamodels/mapping-rules/description.html +++ b/datamodels/mapping-rules/description.html @@ -101,6 +101,10 @@

    Applicable Classes

    Synonymizer

    +

    +

    no

    +

    @@ -112,24 +116,16 @@

    Properties

    Identifier and Mapping Information

    -
    -

    Schema Source

    -
      -

    • from schema: https://w3id.org/oak/mapping-rules-datamodel

      • -
    -

    LinkML Source

    ```yaml name: description -from_schema: https://w3id.org/oak/mapping-rules-datamodel -rank: 1000 alias: description -owner: MappingRule domain_of: - MappingRule +- Synonymizer range: string 
    </details>
    diff --git a/datamodels/mapping-rules/index.html b/datamodels/mapping-rules/index.html index dbb62bafa..430af5c7c 100644 --- a/datamodels/mapping-rules/index.html +++ b/datamodels/mapping-rules/index.html @@ -112,7 +112,7 @@

    Mapping Rules Datamodel

    -

    A datamodel for specifying lexical mapping rules.

    +

    A datamodel for specifying lexical mapping rules

    URI: https://w3id.org/oak/mapping-rules-datamodel

    Name: mapping-rules-datamodel

    @@ -157,10 +157,13 @@

    Classes

    RelationshipToTerm

    A relationship of an ontology element to a lexical term

    -

    Synonymizer

    +

    RuleSet

    +

    A set of rules for generating synonyms or alternate lexical elements.

    + +

    Synonymizer

    None

    -

    Test

    +

    Test

    None

    @@ -277,19 +280,16 @@

    Slots

    tests

    Unit tests for each rules

    -

    the_rule

    -

    Description of the rule

    - -

    transformations

    +

    transformations

    -

    transformations_included_in

    +

    transformations_included_in

    -

    type

    +

    type

    The type of transformation

    -

    weight

    +

    weight

    Weighting of the rule, positive increases the confidence, negative decreases

    @@ -361,19 +361,22 @@

    Types

    Objectidentifier

    A URI or CURIE that represents an object in the model

    -

    Sparqlpath

    +

    RegularExpressionString

    +

    + +

    Sparqlpath

    A string encoding a SPARQL Property Path

    -

    String

    +

    String

    A character string

    -

    Time

    +

    Time

    A time object represents a (local) time of day, independent of any particular…

    -

    Uri

    +

    Uri

    a complete URI

    -

    Uriorcurie

    +

    Uriorcurie

    a URI or a CURIE

    diff --git a/datamodels/mapping-rules/mapping-rules-datamodel.html b/datamodels/mapping-rules/mapping-rules-datamodel.html index 7415c7e7f..def6de196 100644 --- a/datamodels/mapping-rules/mapping-rules-datamodel.html +++ b/datamodels/mapping-rules/mapping-rules-datamodel.html @@ -85,7 +85,7 @@

    mapping-rules-datamodel

    -

    A datamodel for specifying lexical mapping rules.

    +

    A datamodel for specifying lexical mapping rules

    URI: https://w3id.org/oak/mapping-rules-datamodel

    diff --git a/datamodels/mapping-rules/prefix.html b/datamodels/mapping-rules/prefix.html index 202b10da0..b6e679faf 100644 --- a/datamodels/mapping-rules/prefix.html +++ b/datamodels/mapping-rules/prefix.html @@ -105,6 +105,10 @@

    Applicable Classes

    RuleSet

    +

    A set of rules for generating synonyms or alternate lexical elements

    +

    no

    +

    @@ -126,6 +130,7 @@

    LinkML Source
    </details>
    diff --git a/datamodels/mapping-rules/rules.html b/datamodels/mapping-rules/rules.html index e4d876b9f..fc8eaf9c0 100644 --- a/datamodels/mapping-rules/rules.html +++ b/datamodels/mapping-rules/rules.html @@ -85,7 +85,6 @@

    Slot: rules

    -

    all rules

    URI: mappingrules:rules

    @@ -102,40 +101,32 @@

    Applicable Classes

    RuleSet

    +

    A set of rules for generating synonyms or alternate lexical elements

    +

    no

    +

    Properties

    Identifier and Mapping Information

    -
    -

    Schema Source

    -
      -

    • from schema: https://w3id.org/oak/mapping-rules-datamodel

      • -
    -

    LinkML Source

    ```yaml name: rules -description: all rules -from_schema: https://w3id.org/oak/mapping-rules-datamodel -rank: 1000 -multivalued: true alias: rules -owner: MappingRuleCollection domain_of: - MappingRuleCollection -range: MappingRule -inlined: true +- RuleSet +range: string 
    </details>
    diff --git a/genindex.html b/genindex.html index dbc0641e5..45f365d39 100644 --- a/genindex.html +++ b/genindex.html @@ -219,6 +219,8 @@

    Symbols

    @@ -148,6 +149,7 @@ attributes: domain_of: - Synonymizer - Test + - RuleSet range: string ``` diff --git a/mapping-rules/description.md b/mapping-rules/description.md index ee0e73c71..1b4c63976 100644 --- a/mapping-rules/description.md +++ b/mapping-rules/description.md @@ -14,6 +14,7 @@ URI: [mappingrules:description](https://w3id.org/oak/mapping-rules-datamodel/des | Name | Description | Modifies Slot | | --- | --- | --- | [MappingRule](MappingRule.md) | An individual mapping rule, if preconditions match the postconditions are app... | no | +[Synonymizer](Synonymizer.md) | | no | @@ -37,25 +38,16 @@ URI: [mappingrules:description](https://w3id.org/oak/mapping-rules-datamodel/des -### Schema Source - - -* from schema: https://w3id.org/oak/mapping-rules-datamodel - - - ## LinkML Source
    ```yaml name: description -from_schema: https://w3id.org/oak/mapping-rules-datamodel -rank: 1000 alias: description -owner: MappingRule domain_of: - MappingRule +- Synonymizer range: string ``` diff --git a/mapping-rules/index.md b/mapping-rules/index.md index fbcf02945..8c8096adb 100644 --- a/mapping-rules/index.md +++ b/mapping-rules/index.md @@ -1,6 +1,6 @@ # Mapping Rules Datamodel -A datamodel for specifying lexical mapping rules. +A datamodel for specifying lexical mapping rules URI: https://w3id.org/oak/mapping-rules-datamodel @@ -23,6 +23,7 @@ Name: mapping-rules-datamodel | [Postcondition](Postcondition.md) | None | | [Precondition](Precondition.md) | A pattern to be matched against an individual SSSOM mapping | | [RelationshipToTerm](RelationshipToTerm.md) | A relationship of an ontology element to a lexical term | +| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements. | | [Synonymizer](Synonymizer.md) | None | | [Test](Test.md) | None | @@ -66,7 +67,6 @@ Name: mapping-rules-datamodel | [synonymizer](synonymizer.md) | Normalizing rules to labels | | [term](term.md) | A normalized term that groups ontology elements | | [tests](tests.md) | Unit tests for each rules | -| [the_rule](the_rule.md) | Description of the rule | | [transformations](transformations.md) | | | [transformations_included_in](transformations_included_in.md) | | | [type](type.md) | The type of transformation | @@ -98,6 +98,7 @@ Name: mapping-rules-datamodel | [Ncname](Ncname.md) | Prefix part of CURIE | | [Nodeidentifier](Nodeidentifier.md) | A URI, CURIE or BNODE that represents a node in a model | | [Objectidentifier](Objectidentifier.md) | A URI or CURIE that represents an object in the model | +| [RegularExpressionString](RegularExpressionString.md) | | | [Sparqlpath](Sparqlpath.md) | A string encoding a SPARQL Property Path | | [String](String.md) | A character string | | [Time](Time.md) | A time object represents a (local) time of day, independent of any particular... | diff --git a/mapping-rules/mapping-rules-datamodel.md b/mapping-rules/mapping-rules-datamodel.md index 91d00b3ec..ebfb11600 100644 --- a/mapping-rules/mapping-rules-datamodel.md +++ b/mapping-rules/mapping-rules-datamodel.md @@ -1,6 +1,6 @@ # mapping-rules-datamodel -A datamodel for specifying lexical mapping rules. +A datamodel for specifying lexical mapping rules URI: https://w3id.org/oak/mapping-rules-datamodel diff --git a/mapping-rules/prefix.md b/mapping-rules/prefix.md index 15feaa8e7..344ab5063 100644 --- a/mapping-rules/prefix.md +++ b/mapping-rules/prefix.md @@ -15,6 +15,7 @@ URI: [mappingrules:prefix](https://w3id.org/oak/mapping-rules-datamodel/prefix) | --- | --- | --- | [Synonymizer](Synonymizer.md) | | no | [Test](Test.md) | | no | +[RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements | no | @@ -48,6 +49,7 @@ alias: prefix domain_of: - Synonymizer - Test +- RuleSet range: string ``` diff --git a/mapping-rules/rules.md b/mapping-rules/rules.md index 74d72f53a..eb0671fa7 100644 --- a/mapping-rules/rules.md +++ b/mapping-rules/rules.md @@ -1,10 +1,5 @@ # Slot: rules - -_all rules_ - - - URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules) @@ -19,6 +14,7 @@ URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules) | Name | Description | Modifies Slot | | --- | --- | --- | [MappingRuleCollection](MappingRuleCollection.md) | A collection of mapping rules | no | +[RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements | no | @@ -28,9 +24,7 @@ URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules) ## Properties -* Range: [MappingRule](MappingRule.md) - -* Multivalued: True +* Range: [String](String.md) @@ -44,29 +38,17 @@ URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules) -### Schema Source - - -* from schema: https://w3id.org/oak/mapping-rules-datamodel - - - ## LinkML Source
    ```yaml name: rules -description: all rules -from_schema: https://w3id.org/oak/mapping-rules-datamodel -rank: 1000 -multivalued: true alias: rules -owner: MappingRuleCollection domain_of: - MappingRuleCollection -range: MappingRule -inlined: true +- RuleSet +range: string ```
    \ No newline at end of file diff --git a/mapping-rules/the_rule.md b/mapping-rules/the_rule.md deleted file mode 100644 index 9ed84b67a..000000000 --- a/mapping-rules/the_rule.md +++ /dev/null @@ -1,68 +0,0 @@ -# Slot: the_rule - - -_Description of the rule._ - - - -URI: [mappingrules:the_rule](https://w3id.org/oak/mapping-rules-datamodel/the_rule) - - - - - - - - -## Applicable Classes - -| Name | Description | Modifies Slot | -| --- | --- | --- | -[Synonymizer](Synonymizer.md) | | no | - - - - - - - -## Properties - -* Range: [String](String.md) - - - - - -## Identifier and Mapping Information - - - - - - - -### Schema Source - - -* from schema: https://w3id.org/oak/mapping-rules-datamodel - - - - -## LinkML Source - -
    -```yaml -name: the_rule -description: Description of the rule. -from_schema: https://w3id.org/oak/mapping-rules-datamodel -rank: 1000 -alias: the_rule -owner: Synonymizer -domain_of: -- Synonymizer -range: string - -``` -
    \ No newline at end of file diff --git a/objects.inv b/objects.inv index 0fae4c677..85f1b0efd 100644 Binary files a/objects.inv and b/objects.inv differ diff --git a/packages/src/oaklib.utilities.lexical.lexical_indexer.html b/packages/src/oaklib.utilities.lexical.lexical_indexer.html index 8825d3ed6..a9a3065c3 100644 --- a/packages/src/oaklib.utilities.lexical.lexical_indexer.html +++ b/packages/src/oaklib.utilities.lexical.lexical_indexer.html @@ -119,46 +119,43 @@

    Lexical Utilities

    add_labels_from_uris(oi)

    Adds a label based on the CURIE or URI for entities that lack labels

    -

    apply_synonymizer(term, rules)

    -

    Apply synonymizer rules declared in the given match-rules.yaml file.

    - -

    apply_transformation(term, transformation)

    +

    apply_transformation(term, transformation)

    Apply an individual transformation on a term

    -

    create_lexical_index(oi[, pipelines, ...])

    +

    create_lexical_index(oi[, pipelines, ...])

    Generates a LexicalIndex keyed by normalized terms

    -

    create_mapping(term, r1, r2[, pred, confidence])

    +

    create_mapping(term, r1, r2[, pred, confidence])

    Create mappings between a pair of entities.

    -

    create_or_load_lexical_index(path, oi, **kwargs)

    +

    create_or_load_lexical_index(path, oi, **kwargs)

    Creates a lexical index and saves it to the specified path if it does not exist.

    -

    inferred_mapping(oi, term, r1, r2[, ruleset])

    +

    inferred_mapping(oi, term, r1, r2[, ruleset])

    Create a mapping from a pair of relationships, applying rules to filter or assign confidence

    -

    inverse_logit(weight)

    +

    inverse_logit(weight)

    Inverse logit

    -

    invert_mapping_predicate(pred)

    +

    invert_mapping_predicate(pred)

    Return the opposite of predicate passed.

    -

    lexical_index_to_sssom(oi, lexical_index[, ...])

    +

    lexical_index_to_sssom(oi, lexical_index[, ...])

    Transform a lexical index to an SSSOM MappingSetDataFrame by finding all pairs for any given index term.

    -

    load_lexical_index(path[, syntax])

    +

    load_lexical_index(path[, syntax])

    Loads from a YAML file

    -

    load_mapping_rules(path)

    +

    load_mapping_rules(path)

    Loads from a YAML file that contains rules for mapping.

    -

    precondition_holds(precondition, mapping)

    +

    precondition_holds(precondition, mapping)

    -

    save_lexical_index(lexical_index, path[, syntax])

    +

    save_lexical_index(lexical_index, path[, syntax])

    Saves a YAML using standard mapping of datanodel to YAML

    -

    save_mapping_rules(mapping_rules, path)

    +

    save_mapping_rules(mapping_rules, path)

    Saves a YAML using standard mapping of datanodel to YAML

    diff --git a/searchindex.js b/searchindex.js index 98b4e5743..67b648585 100644 --- a/searchindex.js +++ b/searchindex.js @@ -1 +1 @@ -Search.setIndex({"docnames": ["cli", "concepts", "contributing", "datamodels/association/Association", "datamodels/association/AssociationChange", "datamodels/association/Boolean", "datamodels/association/Curie", "datamodels/association/Date", "datamodels/association/DateOrDatetime", "datamodels/association/Datetime", "datamodels/association/Decimal", "datamodels/association/Double", "datamodels/association/Float", "datamodels/association/Integer", "datamodels/association/Jsonpath", "datamodels/association/Jsonpointer", "datamodels/association/Ncname", "datamodels/association/NegatedAssociation", "datamodels/association/Nodeidentifier", "datamodels/association/Objectidentifier", "datamodels/association/PairwiseCoAssociation", "datamodels/association/ParserConfiguration", "datamodels/association/PositiveOrNegativeAssociation", "datamodels/association/PropertyValue", "datamodels/association/RollupGroup", "datamodels/association/Sparqlpath", "datamodels/association/String", "datamodels/association/Time", "datamodels/association/Uri", "datamodels/association/Uriorcurie", "datamodels/association/aggregator_knowledge_source", "datamodels/association/association", "datamodels/association/associations", "datamodels/association/associations_for_subjects_in_common", "datamodels/association/closure_delta", "datamodels/association/closure_information_content_delta", "datamodels/association/closure_predicates", "datamodels/association/comments", "datamodels/association/core_triple", "datamodels/association/creation_date", "datamodels/association/date", "datamodels/association/denormalized_slot", "datamodels/association/diff_slot", "datamodels/association/evidence_type", "datamodels/association/group_object", "datamodels/association/include_association_attributes", "datamodels/association/index", "datamodels/association/is_creation", "datamodels/association/is_deletion", "datamodels/association/is_generalization", "datamodels/association/is_migration", "datamodels/association/is_specialization", "datamodels/association/modification_date", "datamodels/association/negated", "datamodels/association/new_date", "datamodels/association/new_object", "datamodels/association/new_predicate", "datamodels/association/number_subject_unique_to_entity1", "datamodels/association/number_subject_unique_to_entity2", "datamodels/association/number_subjects_in_common", "datamodels/association/number_subjects_in_union", "datamodels/association/object", "datamodels/association/object1", "datamodels/association/object1_label", "datamodels/association/object2", "datamodels/association/object2_label", "datamodels/association/object_closure", "datamodels/association/object_closure_label", "datamodels/association/object_label", "datamodels/association/old_date", "datamodels/association/old_object", "datamodels/association/old_object_obsolete", "datamodels/association/old_predicate", "datamodels/association/original_object", "datamodels/association/original_predicate", "datamodels/association/original_subject", "datamodels/association/predicate", "datamodels/association/predicate_label", "datamodels/association/preserve_negated_associations", "datamodels/association/primary_knowledge_source", "datamodels/association/property_values", "datamodels/association/proportion_subjects_in_common", "datamodels/association/publication_is_added", "datamodels/association/publication_is_deleted", "datamodels/association/publications", "datamodels/association/sub_groups", "datamodels/association/subject", "datamodels/association/subject_closure", "datamodels/association/subject_closure_label", "datamodels/association/subject_label", "datamodels/association/subjects_in_common", "datamodels/association/summary_group", "datamodels/association/supporting_objects", "datamodels/class-enrichment/Boolean", "datamodels/class-enrichment/ClassEnrichmentConfiguration", "datamodels/class-enrichment/ClassEnrichmentResult", "datamodels/class-enrichment/ClassEnrichmentResultSet", "datamodels/class-enrichment/Curie", "datamodels/class-enrichment/Date", "datamodels/class-enrichment/DateOrDatetime", "datamodels/class-enrichment/Datetime", "datamodels/class-enrichment/Decimal", "datamodels/class-enrichment/Double", "datamodels/class-enrichment/Float", "datamodels/class-enrichment/Integer", "datamodels/class-enrichment/Jsonpath", "datamodels/class-enrichment/Jsonpointer", "datamodels/class-enrichment/Ncname", "datamodels/class-enrichment/Nodeidentifier", "datamodels/class-enrichment/Objectidentifier", "datamodels/class-enrichment/Position", "datamodels/class-enrichment/SortFieldEnum", "datamodels/class-enrichment/Sparqlpath", "datamodels/class-enrichment/String", "datamodels/class-enrichment/Time", "datamodels/class-enrichment/Uri", "datamodels/class-enrichment/Uriorcurie", "datamodels/class-enrichment/ancestor_of_more_informative_result", "datamodels/class-enrichment/background_count", "datamodels/class-enrichment/background_total", "datamodels/class-enrichment/class-enrichment", "datamodels/class-enrichment/class_id", "datamodels/class-enrichment/class_label", "datamodels/class-enrichment/descendant_of_more_informative_result", "datamodels/class-enrichment/direction", "datamodels/class-enrichment/false_discovery_rate", "datamodels/class-enrichment/fold_enrichment", "datamodels/class-enrichment/index", "datamodels/class-enrichment/p_value", "datamodels/class-enrichment/p_value_adjusted", "datamodels/class-enrichment/p_value_cutoff", "datamodels/class-enrichment/probability", "datamodels/class-enrichment/rank", "datamodels/class-enrichment/results", "datamodels/class-enrichment/sample_count", "datamodels/class-enrichment/sample_total", "datamodels/cross-ontology-diff/Boolean", "datamodels/cross-ontology-diff/Curie", "datamodels/cross-ontology-diff/Date", "datamodels/cross-ontology-diff/DateOrDatetime", "datamodels/cross-ontology-diff/Datetime", "datamodels/cross-ontology-diff/Decimal", "datamodels/cross-ontology-diff/DiffCategory", "datamodels/cross-ontology-diff/Double", "datamodels/cross-ontology-diff/EntityReference", "datamodels/cross-ontology-diff/Float", "datamodels/cross-ontology-diff/Integer", "datamodels/cross-ontology-diff/Jsonpath", "datamodels/cross-ontology-diff/Jsonpointer", "datamodels/cross-ontology-diff/Label", "datamodels/cross-ontology-diff/MappingCardinalityEnum", "datamodels/cross-ontology-diff/Ncname", "datamodels/cross-ontology-diff/Nodeidentifier", "datamodels/cross-ontology-diff/Objectidentifier", "datamodels/cross-ontology-diff/Position", "datamodels/cross-ontology-diff/RelationalDiff", "datamodels/cross-ontology-diff/Source", "datamodels/cross-ontology-diff/Sparqlpath", "datamodels/cross-ontology-diff/String", "datamodels/cross-ontology-diff/StructureDiffResultSet", "datamodels/cross-ontology-diff/Time", "datamodels/cross-ontology-diff/Uri", "datamodels/cross-ontology-diff/Uriorcurie", "datamodels/cross-ontology-diff/category", "datamodels/cross-ontology-diff/cross-ontology-diff", "datamodels/cross-ontology-diff/index", "datamodels/cross-ontology-diff/is_functional", "datamodels/cross-ontology-diff/label", "datamodels/cross-ontology-diff/left_object_id", "datamodels/cross-ontology-diff/left_object_is_functional", "datamodels/cross-ontology-diff/left_object_label", "datamodels/cross-ontology-diff/left_object_name", "datamodels/cross-ontology-diff/left_predicate_id", "datamodels/cross-ontology-diff/left_predicate_label", "datamodels/cross-ontology-diff/left_predicate_name", "datamodels/cross-ontology-diff/left_side", "datamodels/cross-ontology-diff/left_source", "datamodels/cross-ontology-diff/left_subject_id", "datamodels/cross-ontology-diff/left_subject_is_functional", "datamodels/cross-ontology-diff/left_subject_label", "datamodels/cross-ontology-diff/left_subject_name", "datamodels/cross-ontology-diff/object", "datamodels/cross-ontology-diff/object_mapping_cardinality", "datamodels/cross-ontology-diff/object_mapping_predicate", "datamodels/cross-ontology-diff/predicate", "datamodels/cross-ontology-diff/results", "datamodels/cross-ontology-diff/right_intermediate_ids", "datamodels/cross-ontology-diff/right_object_id", "datamodels/cross-ontology-diff/right_object_label", "datamodels/cross-ontology-diff/right_object_name", "datamodels/cross-ontology-diff/right_predicate_ids", "datamodels/cross-ontology-diff/right_predicate_labels", "datamodels/cross-ontology-diff/right_predicate_names", "datamodels/cross-ontology-diff/right_side", "datamodels/cross-ontology-diff/right_source", "datamodels/cross-ontology-diff/right_subject_id", "datamodels/cross-ontology-diff/right_subject_label", "datamodels/cross-ontology-diff/right_subject_name", "datamodels/cross-ontology-diff/side", "datamodels/cross-ontology-diff/subject", "datamodels/cross-ontology-diff/subject_mapping_cardinality", "datamodels/cross-ontology-diff/subject_mapping_predicate", "datamodels/cross-ontology-diff/types", "datamodels/funowl/index", "datamodels/index", "datamodels/item-list/Boolean", "datamodels/item-list/Curie", "datamodels/item-list/Date", "datamodels/item-list/DateOrDatetime", "datamodels/item-list/Datetime", "datamodels/item-list/Decimal", "datamodels/item-list/Double", "datamodels/item-list/Float", "datamodels/item-list/Integer", "datamodels/item-list/ItemList", "datamodels/item-list/ItemListCollection", "datamodels/item-list/ItemListOrderType", "datamodels/item-list/Jsonpath", "datamodels/item-list/Jsonpointer", "datamodels/item-list/ListItem", "datamodels/item-list/Ncname", "datamodels/item-list/Nodeidentifier", "datamodels/item-list/Objectidentifier", "datamodels/item-list/Sparqlpath", "datamodels/item-list/String", "datamodels/item-list/Thing", "datamodels/item-list/Time", "datamodels/item-list/Uri", "datamodels/item-list/Uriorcurie", "datamodels/item-list/additionalType", "datamodels/item-list/categories", "datamodels/item-list/description", "datamodels/item-list/elementId", "datamodels/item-list/id", "datamodels/item-list/idType", "datamodels/item-list/identifiers", "datamodels/item-list/index", "datamodels/item-list/item", "datamodels/item-list/itemList", "datamodels/item-list/itemListElements", "datamodels/item-list/itemLists", "datamodels/item-list/itemMetadataMap", "datamodels/item-list/keywords", "datamodels/item-list/name", "datamodels/item-list/numberOfItems", "datamodels/item-list/position", "datamodels/item-list/previousItem", "datamodels/item-list/type", "datamodels/item-list/url", "datamodels/item-list/wasGeneratedBy", "datamodels/kgcl/index", "datamodels/lexical-index/Activity", "datamodels/lexical-index/Any", "datamodels/lexical-index/Boolean", "datamodels/lexical-index/Curie", "datamodels/lexical-index/Date", "datamodels/lexical-index/DateOrDatetime", "datamodels/lexical-index/Datetime", "datamodels/lexical-index/Decimal", "datamodels/lexical-index/Double", "datamodels/lexical-index/Float", "datamodels/lexical-index/Integer", "datamodels/lexical-index/Jsonpath", "datamodels/lexical-index/Jsonpointer", "datamodels/lexical-index/LexicalGrouping", "datamodels/lexical-index/LexicalIndex", "datamodels/lexical-index/LexicalTransformation", "datamodels/lexical-index/LexicalTransformationPipeline", "datamodels/lexical-index/Ncname", "datamodels/lexical-index/Nodeidentifier", "datamodels/lexical-index/Objectidentifier", "datamodels/lexical-index/RelationshipToTerm", "datamodels/lexical-index/Sparqlpath", "datamodels/lexical-index/String", "datamodels/lexical-index/Time", "datamodels/lexical-index/TransformationType", "datamodels/lexical-index/Uri", "datamodels/lexical-index/Uriorcurie", "datamodels/lexical-index/element", "datamodels/lexical-index/element_term", "datamodels/lexical-index/groupings", "datamodels/lexical-index/index", "datamodels/lexical-index/lexical-index", "datamodels/lexical-index/lexican-index", "datamodels/lexical-index/name", "datamodels/lexical-index/params", "datamodels/lexical-index/pipeline", "datamodels/lexical-index/pipelines", "datamodels/lexical-index/predicate", "datamodels/lexical-index/relationships", "datamodels/lexical-index/source", "datamodels/lexical-index/synonymized", "datamodels/lexical-index/term", "datamodels/lexical-index/transformations", "datamodels/lexical-index/type", "datamodels/lexical-index/types", "datamodels/mapping-rules/Activity", "datamodels/mapping-rules/Any", "datamodels/mapping-rules/Boolean", "datamodels/mapping-rules/Curie", "datamodels/mapping-rules/Date", "datamodels/mapping-rules/DateOrDatetime", "datamodels/mapping-rules/Datetime", "datamodels/mapping-rules/Decimal", "datamodels/mapping-rules/Double", "datamodels/mapping-rules/Float", "datamodels/mapping-rules/Integer", "datamodels/mapping-rules/Jsonpath", "datamodels/mapping-rules/Jsonpointer", "datamodels/mapping-rules/LexicalGrouping", "datamodels/mapping-rules/LexicalIndex", "datamodels/mapping-rules/LexicalTransformation", "datamodels/mapping-rules/LexicalTransformationPipeline", "datamodels/mapping-rules/MappingRule", "datamodels/mapping-rules/MappingRuleCollection", "datamodels/mapping-rules/Ncname", "datamodels/mapping-rules/Nodeidentifier", "datamodels/mapping-rules/Objectidentifier", "datamodels/mapping-rules/Postcondition", "datamodels/mapping-rules/Precondition", "datamodels/mapping-rules/RelationshipToTerm", "datamodels/mapping-rules/Sparqlpath", "datamodels/mapping-rules/String", "datamodels/mapping-rules/Synonymizer", "datamodels/mapping-rules/Test", "datamodels/mapping-rules/Time", "datamodels/mapping-rules/TransformationType", "datamodels/mapping-rules/Uri", "datamodels/mapping-rules/Uriorcurie", "datamodels/mapping-rules/description", "datamodels/mapping-rules/element", "datamodels/mapping-rules/element_term", "datamodels/mapping-rules/groupings", "datamodels/mapping-rules/index", "datamodels/mapping-rules/input", "datamodels/mapping-rules/lexical-index", "datamodels/mapping-rules/lexican-index", "datamodels/mapping-rules/mapping-rules", "datamodels/mapping-rules/mapping-rules-datamodel", "datamodels/mapping-rules/mapping_source_one_of", "datamodels/mapping-rules/match", "datamodels/mapping-rules/match_scope", "datamodels/mapping-rules/minimum_confidence", "datamodels/mapping-rules/name", "datamodels/mapping-rules/object_match_field_one_of", "datamodels/mapping-rules/object_source_one_of", "datamodels/mapping-rules/oneway", "datamodels/mapping-rules/output", "datamodels/mapping-rules/params", "datamodels/mapping-rules/pipeline", "datamodels/mapping-rules/pipelines", "datamodels/mapping-rules/postconditions", "datamodels/mapping-rules/preconditions", "datamodels/mapping-rules/predicate", "datamodels/mapping-rules/predicate_id", "datamodels/mapping-rules/predicate_id_one_of", "datamodels/mapping-rules/prefix", "datamodels/mapping-rules/qualifier", "datamodels/mapping-rules/relationships", "datamodels/mapping-rules/replacement", "datamodels/mapping-rules/rules", "datamodels/mapping-rules/source", "datamodels/mapping-rules/subject_match_field_one_of", "datamodels/mapping-rules/subject_source_one_of", "datamodels/mapping-rules/synonymized", "datamodels/mapping-rules/synonymizer", "datamodels/mapping-rules/term", "datamodels/mapping-rules/tests", "datamodels/mapping-rules/the_rule", "datamodels/mapping-rules/transformations", "datamodels/mapping-rules/transformations_included_in", "datamodels/mapping-rules/type", "datamodels/mapping-rules/types", "datamodels/mapping-rules/weight", "datamodels/obograph/Axiom", "datamodels/obograph/BasicPropertyValue", "datamodels/obograph/Boolean", "datamodels/obograph/Curie", "datamodels/obograph/Date", "datamodels/obograph/DateOrDatetime", "datamodels/obograph/Datetime", "datamodels/obograph/Decimal", "datamodels/obograph/DefinitionPropertyValue", "datamodels/obograph/DisjointClassExpressionsAxiom", "datamodels/obograph/DomainRangeAxiom", "datamodels/obograph/Double", "datamodels/obograph/Edge", "datamodels/obograph/EquivalentNodesSet", "datamodels/obograph/ExistentialRestrictionExpression", "datamodels/obograph/Float", "datamodels/obograph/Graph", "datamodels/obograph/GraphDocument", "datamodels/obograph/Integer", "datamodels/obograph/Jsonpath", "datamodels/obograph/Jsonpointer", "datamodels/obograph/LogicalDefinitionAxiom", "datamodels/obograph/Meta", "datamodels/obograph/Ncname", "datamodels/obograph/Node", "datamodels/obograph/NodeTypeEnum", "datamodels/obograph/Nodeidentifier", "datamodels/obograph/Objectidentifier", "datamodels/obograph/OboIdentifierString", "datamodels/obograph/PredsEnum", "datamodels/obograph/PrefixDeclaration", "datamodels/obograph/PropertyChainAxiom", "datamodels/obograph/PropertyTypeEnum", "datamodels/obograph/PropertyValue", "datamodels/obograph/ScopeEnum", "datamodels/obograph/ScopesEnum", "datamodels/obograph/Sparqlpath", "datamodels/obograph/String", "datamodels/obograph/SubsetDefinition", "datamodels/obograph/SynonymPropertyValue", "datamodels/obograph/SynonymTypeDefinition", "datamodels/obograph/SynonymTypeIdentifierString", "datamodels/obograph/Time", "datamodels/obograph/Uri", "datamodels/obograph/Uriorcurie", "datamodels/obograph/XrefPropertyValue", "datamodels/obograph/XrefString", "datamodels/obograph/allValuesFromEdges", "datamodels/obograph/basicPropertyValues", "datamodels/obograph/chainPredicateIds", "datamodels/obograph/classExpressions", "datamodels/obograph/classIds", "datamodels/obograph/comments", "datamodels/obograph/definedClassId", "datamodels/obograph/definition", "datamodels/obograph/deprecated", "datamodels/obograph/disjointClassExpressionsAxioms", "datamodels/obograph/domainClassIds", "datamodels/obograph/domainRangeAxioms", "datamodels/obograph/edges", "datamodels/obograph/equivalentNodesSets", "datamodels/obograph/fillerId", "datamodels/obograph/genusIds", "datamodels/obograph/graphs", "datamodels/obograph/id", "datamodels/obograph/index", "datamodels/obograph/isExact", "datamodels/obograph/label", "datamodels/obograph/lang", "datamodels/obograph/lbl", "datamodels/obograph/logicalDefinitionAxioms", "datamodels/obograph/meta", "datamodels/obograph/namespace", "datamodels/obograph/nodeIds", "datamodels/obograph/nodes", "datamodels/obograph/obj", "datamodels/obograph/obographs_datamodel", "datamodels/obograph/obographs_linkml_model", "datamodels/obograph/pred", "datamodels/obograph/predicateId", "datamodels/obograph/prefix", "datamodels/obograph/prefixes", "datamodels/obograph/propertyChainAxioms", "datamodels/obograph/propertyId", "datamodels/obograph/propertyType", "datamodels/obograph/rangeClassIds", "datamodels/obograph/representativeNodeId", "datamodels/obograph/representitiveNodeId", "datamodels/obograph/restrictions", "datamodels/obograph/scope", "datamodels/obograph/sub", "datamodels/obograph/subsetDefinitions", "datamodels/obograph/subsets", "datamodels/obograph/synonymType", "datamodels/obograph/synonymTypeDefinitions", "datamodels/obograph/synonyms", "datamodels/obograph/type", "datamodels/obograph/types", "datamodels/obograph/unionEquivalentTo", "datamodels/obograph/unionEquivalentToExpression", "datamodels/obograph/val", "datamodels/obograph/valType", "datamodels/obograph/version", "datamodels/obograph/xrefs", "datamodels/ontology-metadata/Agent", "datamodels/ontology-metadata/AllotropePermittedProfile", "datamodels/ontology-metadata/AllotropeRequiredProfile", "datamodels/ontology-metadata/Annotation", "datamodels/ontology-metadata/AnnotationProperty", "datamodels/ontology-metadata/AnnotationPropertyMixin", "datamodels/ontology-metadata/Anonymous", "datamodels/ontology-metadata/AnonymousClassExpression", "datamodels/ontology-metadata/Any", "datamodels/ontology-metadata/Axiom", "datamodels/ontology-metadata/Boolean", "datamodels/ontology-metadata/CURIELiteral", "datamodels/ontology-metadata/Class", "datamodels/ontology-metadata/ClassExpression", "datamodels/ontology-metadata/Curie", "datamodels/ontology-metadata/Date", "datamodels/ontology-metadata/DateOrDatetime", "datamodels/ontology-metadata/Datetime", "datamodels/ontology-metadata/Decimal", "datamodels/ontology-metadata/DefinitionConstraintComponent", "datamodels/ontology-metadata/Double", "datamodels/ontology-metadata/Expression", "datamodels/ontology-metadata/Float", "datamodels/ontology-metadata/GoPermittedProfile", "datamodels/ontology-metadata/GoRecommendedProfile", "datamodels/ontology-metadata/GoRequiredProfile", "datamodels/ontology-metadata/HasCategory", "datamodels/ontology-metadata/HasLifeCycle", "datamodels/ontology-metadata/HasMappings", "datamodels/ontology-metadata/HasMinimalMetadata", "datamodels/ontology-metadata/HasProvenance", "datamodels/ontology-metadata/HasSynonyms", "datamodels/ontology-metadata/HasUserInformation", "datamodels/ontology-metadata/HomoSapiens", "datamodels/ontology-metadata/IEDB_alternative_term", "datamodels/ontology-metadata/ISA_alternative_term", "datamodels/ontology-metadata/Image", "datamodels/ontology-metadata/Integer", "datamodels/ontology-metadata/IriType", "datamodels/ontology-metadata/Jsonpath", "datamodels/ontology-metadata/Jsonpointer", "datamodels/ontology-metadata/LabelType", "datamodels/ontology-metadata/NCIT_definition_source", "datamodels/ontology-metadata/NCIT_term_source", "datamodels/ontology-metadata/NCIT_term_type", "datamodels/ontology-metadata/NamedIndividual", "datamodels/ontology-metadata/NamedObject", "datamodels/ontology-metadata/NarrativeText", "datamodels/ontology-metadata/Ncname", "datamodels/ontology-metadata/Nodeidentifier", "datamodels/ontology-metadata/NotObsoleteAspect", "datamodels/ontology-metadata/OBO_foundry_unique_label", "datamodels/ontology-metadata/ObiPermittedProfile", "datamodels/ontology-metadata/ObiRequiredProfile", "datamodels/ontology-metadata/ObjectProperty", "datamodels/ontology-metadata/Objectidentifier", "datamodels/ontology-metadata/ObsoleteAspect", "datamodels/ontology-metadata/Ontology", "datamodels/ontology-metadata/Ontology-Metadata", "datamodels/ontology-metadata/Property", "datamodels/ontology-metadata/PropertyExpression", "datamodels/ontology-metadata/Restriction", "datamodels/ontology-metadata/Sparqlpath", "datamodels/ontology-metadata/String", "datamodels/ontology-metadata/Subset", "datamodels/ontology-metadata/Term", "datamodels/ontology-metadata/Thing", "datamodels/ontology-metadata/TidyString", "datamodels/ontology-metadata/Time", "datamodels/ontology-metadata/TransitiveProperty", "datamodels/ontology-metadata/URLLiteral", "datamodels/ontology-metadata/Uri", "datamodels/ontology-metadata/Uriorcurie", "datamodels/ontology-metadata/allValuesFrom", "datamodels/ontology-metadata/alternative_term", "datamodels/ontology-metadata/annotatedProperty", "datamodels/ontology-metadata/annotatedSource", "datamodels/ontology-metadata/annotatedTarget", "datamodels/ontology-metadata/annotations", "datamodels/ontology-metadata/broadMatch", "datamodels/ontology-metadata/cardinality", "datamodels/ontology-metadata/category", "datamodels/ontology-metadata/changeNote", "datamodels/ontology-metadata/closeMatch", "datamodels/ontology-metadata/comment", "datamodels/ontology-metadata/complementOf", "datamodels/ontology-metadata/conformsTo", "datamodels/ontology-metadata/consider", "datamodels/ontology-metadata/contributor", "datamodels/ontology-metadata/core_property", "datamodels/ontology-metadata/created", "datamodels/ontology-metadata/created_by", "datamodels/ontology-metadata/creation_date", "datamodels/ontology-metadata/creator", "datamodels/ontology-metadata/curator_note", "datamodels/ontology-metadata/database_cross_reference", "datamodels/ontology-metadata/date", "datamodels/ontology-metadata/date_retrieved", "datamodels/ontology-metadata/defaultLanguage", "datamodels/ontology-metadata/definition", "datamodels/ontology-metadata/definition_source", "datamodels/ontology-metadata/depicted_by", "datamodels/ontology-metadata/deprecated", "datamodels/ontology-metadata/disconnected_from", "datamodels/ontology-metadata/disjointWith", "datamodels/ontology-metadata/distinctMembers", "datamodels/ontology-metadata/domain", "datamodels/ontology-metadata/editor_note", "datamodels/ontology-metadata/editor_preferred_term", "datamodels/ontology-metadata/equivalentClass", "datamodels/ontology-metadata/equivalentProperty", "datamodels/ontology-metadata/evidence", "datamodels/ontology-metadata/exactMatch", "datamodels/ontology-metadata/example_of_usage", "datamodels/ontology-metadata/excluded_axiom", "datamodels/ontology-metadata/excluded_from_QC_check", "datamodels/ontology-metadata/excluded_subClassOf", "datamodels/ontology-metadata/excluded_synonym", "datamodels/ontology-metadata/external_ontology", "datamodels/ontology-metadata/hasValue", "datamodels/ontology-metadata/has_alternative_id", "datamodels/ontology-metadata/has_axiom_label", "datamodels/ontology-metadata/has_broad_synonym", "datamodels/ontology-metadata/has_curation_status", "datamodels/ontology-metadata/has_exact_synonym", "datamodels/ontology-metadata/has_narrow_synonym", "datamodels/ontology-metadata/has_obo_namespace", "datamodels/ontology-metadata/has_obsolescence_reason", "datamodels/ontology-metadata/has_ontology_root_term", "datamodels/ontology-metadata/has_rank", "datamodels/ontology-metadata/has_related_synonym", "datamodels/ontology-metadata/has_synonym_type", "datamodels/ontology-metadata/id", "datamodels/ontology-metadata/image", "datamodels/ontology-metadata/imported_from", "datamodels/ontology-metadata/imports", "datamodels/ontology-metadata/in_subset", "datamodels/ontology-metadata/index", "datamodels/ontology-metadata/informative_property", "datamodels/ontology-metadata/intersectionOf", "datamodels/ontology-metadata/inverseOf", "datamodels/ontology-metadata/isDefinedBy", "datamodels/ontology-metadata/is_a_defining_property_chain_axiom", "datamodels/ontology-metadata/is_a_defining_property_chain_axiom_where_second_argument_is_reflexive", "datamodels/ontology-metadata/is_class_level", "datamodels/ontology-metadata/is_cyclic", "datamodels/ontology-metadata/is_inferred", "datamodels/ontology-metadata/is_metadata_tag", "datamodels/ontology-metadata/is_transitive", "datamodels/ontology-metadata/label", "datamodels/ontology-metadata/language", "datamodels/ontology-metadata/license", "datamodels/ontology-metadata/logical_predicate", "datamodels/ontology-metadata/match", "datamodels/ontology-metadata/match_aspect", "datamodels/ontology-metadata/maxQualifiedCardinality", "datamodels/ontology-metadata/members", "datamodels/ontology-metadata/minCardinality", "datamodels/ontology-metadata/minQualifiedCardinality", "datamodels/ontology-metadata/narrowMatch", "datamodels/ontology-metadata/never_in_taxon", "datamodels/ontology-metadata/notes", "datamodels/ontology-metadata/object", "datamodels/ontology-metadata/oboInOwl_id", "datamodels/ontology-metadata/oboInOwl_ontology", "datamodels/ontology-metadata/obsoletion_related_property", "datamodels/ontology-metadata/omo-schema", "datamodels/ontology-metadata/onClass", "datamodels/ontology-metadata/onProperty", "datamodels/ontology-metadata/oneOf", "datamodels/ontology-metadata/ontology_term_requester", "datamodels/ontology-metadata/page", "datamodels/ontology-metadata/predicate", "datamodels/ontology-metadata/propertyChainAxiom", "datamodels/ontology-metadata/provenance_property", "datamodels/ontology-metadata/qualifiedCardinality", "datamodels/ontology-metadata/range", "datamodels/ontology-metadata/reification_predicate", "datamodels/ontology-metadata/sameAs", "datamodels/ontology-metadata/seeAlso", "datamodels/ontology-metadata/shortcut_annotation_property", "datamodels/ontology-metadata/shorthand", "datamodels/ontology-metadata/should_conform_to", "datamodels/ontology-metadata/someValuesFrom", "datamodels/ontology-metadata/source", "datamodels/ontology-metadata/subClassOf", "datamodels/ontology-metadata/synonym", "datamodels/ontology-metadata/temporal_interpretation", "datamodels/ontology-metadata/term_editor", "datamodels/ontology-metadata/term_replaced_by", "datamodels/ontology-metadata/term_tracker_item", "datamodels/ontology-metadata/title", "datamodels/ontology-metadata/type", "datamodels/ontology-metadata/types", "datamodels/ontology-metadata/unionOf", "datamodels/ontology-metadata/url", "datamodels/ontology-metadata/versionIRI", "datamodels/ontology-metadata/versionInfo", "datamodels/ontology-metadata/version_property", "datamodels/search/Boolean", "datamodels/search/BooleanOperator", "datamodels/search/ComplexQuery", "datamodels/search/Curie", "datamodels/search/Date", "datamodels/search/DateOrDatetime", "datamodels/search/Datetime", "datamodels/search/Decimal", "datamodels/search/Double", "datamodels/search/Float", "datamodels/search/GraphFunction", "datamodels/search/Integer", "datamodels/search/Jsonpath", "datamodels/search/Jsonpointer", "datamodels/search/Ncname", "datamodels/search/Nodeidentifier", "datamodels/search/Objectidentifier", "datamodels/search/PathExpression", "datamodels/search/SearchBaseConfiguration", "datamodels/search/SearchProperty", "datamodels/search/SearchResult", "datamodels/search/SearchResultSet", "datamodels/search/SearchTerm", "datamodels/search/SearchTermSyntax", "datamodels/search/Sparqlpath", "datamodels/search/String", "datamodels/search/Time", "datamodels/search/Uri", "datamodels/search/Uriorcurie", "datamodels/search/all_of", "datamodels/search/any_of", "datamodels/search/atom", "datamodels/search/categories", "datamodels/search/configuration", "datamodels/search/cursor", "datamodels/search/force_case_insensitive", "datamodels/search/graph_predicates", "datamodels/search/include_aliases", "datamodels/search/include_definition", "datamodels/search/include_id", "datamodels/search/include_label", "datamodels/search/include_obsoletes_in_results", "datamodels/search/index", "datamodels/search/is_complete", "datamodels/search/is_fuzzy", "datamodels/search/is_partial", "datamodels/search/is_regular_expression", "datamodels/search/limit", "datamodels/search/matches_full_search_term", "datamodels/search/none_of", "datamodels/search/object_id", "datamodels/search/object_label", "datamodels/search/object_match_field", "datamodels/search/object_source", "datamodels/search/object_source_version", "datamodels/search/path_to", "datamodels/search/properties", "datamodels/search/rank", "datamodels/search/result_count", "datamodels/search/results", "datamodels/search/search-datamodel", "datamodels/search/search_term", "datamodels/search/search_terms", "datamodels/search/snippet", "datamodels/search/syntax", "datamodels/search/traversal", "datamodels/search/types", "datamodels/semsql/index", "datamodels/similarity/BestMatch", "datamodels/similarity/Boolean", "datamodels/similarity/Curie", "datamodels/similarity/Date", "datamodels/similarity/DateOrDatetime", "datamodels/similarity/Datetime", "datamodels/similarity/Decimal", "datamodels/similarity/Double", "datamodels/similarity/Float", "datamodels/similarity/Integer", "datamodels/similarity/ItemCount", "datamodels/similarity/Jsonpath", "datamodels/similarity/Jsonpointer", "datamodels/similarity/Ncname", "datamodels/similarity/NegativeLogValue", "datamodels/similarity/Nodeidentifier", "datamodels/similarity/NonNegativeFloat", "datamodels/similarity/Objectidentifier", "datamodels/similarity/PairwiseSimilarity", "datamodels/similarity/Sparqlpath", "datamodels/similarity/String", "datamodels/similarity/TermInfo", "datamodels/similarity/TermPairwiseSimilarity", "datamodels/similarity/TermSetPairwiseSimilarity", "datamodels/similarity/Time", "datamodels/similarity/Uri", "datamodels/similarity/Uriorcurie", "datamodels/similarity/ZeroToOne", "datamodels/similarity/ancestor_id", "datamodels/similarity/ancestor_information_content", "datamodels/similarity/ancestor_label", "datamodels/similarity/ancestor_source", "datamodels/similarity/average_score", "datamodels/similarity/best_score", "datamodels/similarity/cosine_similarity", "datamodels/similarity/dice_similarity", "datamodels/similarity/id", "datamodels/similarity/index", "datamodels/similarity/information_content", "datamodels/similarity/intersection_count", "datamodels/similarity/jaccard_similarity", "datamodels/similarity/label", "datamodels/similarity/match_source", "datamodels/similarity/match_source_label", "datamodels/similarity/match_subsumer", "datamodels/similarity/match_subsumer_label", "datamodels/similarity/match_target", "datamodels/similarity/match_target_label", "datamodels/similarity/metric", "datamodels/similarity/object_best_matches", "datamodels/similarity/object_id", "datamodels/similarity/object_information_content", "datamodels/similarity/object_label", "datamodels/similarity/object_source", "datamodels/similarity/object_termset", "datamodels/similarity/overlap_coefficient", "datamodels/similarity/phenodigm_score", "datamodels/similarity/score", "datamodels/similarity/similarity", "datamodels/similarity/subject_best_matches", "datamodels/similarity/subject_id", "datamodels/similarity/subject_information_content", "datamodels/similarity/subject_label", "datamodels/similarity/subject_source", "datamodels/similarity/subject_termset", "datamodels/similarity/subsumed_by_score", "datamodels/similarity/subsumes_score", "datamodels/similarity/types", "datamodels/similarity/union_count", "datamodels/sssom/index", "datamodels/summary-statistics/Agent", "datamodels/summary-statistics/Boolean", "datamodels/summary-statistics/ChangeTypeStatistic", "datamodels/summary-statistics/ContributorRole", "datamodels/summary-statistics/ContributorStatistics", "datamodels/summary-statistics/Curie", "datamodels/summary-statistics/Date", "datamodels/summary-statistics/DateOrDatetime", "datamodels/summary-statistics/Datetime", "datamodels/summary-statistics/Decimal", "datamodels/summary-statistics/Double", "datamodels/summary-statistics/FacetStatistics", "datamodels/summary-statistics/FacetedCount", "datamodels/summary-statistics/Float", "datamodels/summary-statistics/GlobalStatistics", "datamodels/summary-statistics/GroupedStatistics", "datamodels/summary-statistics/Integer", "datamodels/summary-statistics/Jsonpath", "datamodels/summary-statistics/Jsonpointer", "datamodels/summary-statistics/Ncname", "datamodels/summary-statistics/Nodeidentifier", "datamodels/summary-statistics/Objectidentifier", "datamodels/summary-statistics/Ontology", "datamodels/summary-statistics/Sparqlpath", "datamodels/summary-statistics/String", "datamodels/summary-statistics/SummaryStatisticCollection", "datamodels/summary-statistics/SummaryStatisticsCalculationActivity", "datamodels/summary-statistics/SummaryStatisticsReport", "datamodels/summary-statistics/Time", "datamodels/summary-statistics/UngroupedStatistics", "datamodels/summary-statistics/Uri", "datamodels/summary-statistics/Uriorcurie", "datamodels/summary-statistics/acted_on_behalf_of", "datamodels/summary-statistics/agents", "datamodels/summary-statistics/annotation_property_count", "datamodels/summary-statistics/anonymous_class_expression_count", "datamodels/summary-statistics/anonymous_individual_count", "datamodels/summary-statistics/by_category", "datamodels/summary-statistics/by_ontology", "datamodels/summary-statistics/by_subset", "datamodels/summary-statistics/by_taxon", "datamodels/summary-statistics/change_summary", "datamodels/summary-statistics/class_count", "datamodels/summary-statistics/class_count_by_category", "datamodels/summary-statistics/class_count_by_subset", "datamodels/summary-statistics/class_count_excluding_deprecated", "datamodels/summary-statistics/class_count_with_definitions", "datamodels/summary-statistics/class_count_with_text_definitions", "datamodels/summary-statistics/class_count_without_text_definitions", "datamodels/summary-statistics/class_statistic_group", "datamodels/summary-statistics/compared_with", "datamodels/summary-statistics/contributor_id", "datamodels/summary-statistics/contributor_name", "datamodels/summary-statistics/contributor_summary", "datamodels/summary-statistics/count_statistic", "datamodels/summary-statistics/datatype_property_count", "datamodels/summary-statistics/deprecated_class_count", "datamodels/summary-statistics/deprecated_object_property_count", "datamodels/summary-statistics/description", "datamodels/summary-statistics/description_logic_profile", "datamodels/summary-statistics/distinct_synonym_count", "datamodels/summary-statistics/edge_count_by_predicate", "datamodels/summary-statistics/ended_at_time", "datamodels/summary-statistics/entailed_edge_count_by_predicate", "datamodels/summary-statistics/equivalent_classes_axiom_count", "datamodels/summary-statistics/equivalentclasses_axiom_count", "datamodels/summary-statistics/facet", "datamodels/summary-statistics/filtered_count", "datamodels/summary-statistics/id", "datamodels/summary-statistics/index", "datamodels/summary-statistics/individual_count", "datamodels/summary-statistics/individual_statistic_group", "datamodels/summary-statistics/label", "datamodels/summary-statistics/mapping_count", "datamodels/summary-statistics/mapping_statement_count_by_object_source", "datamodels/summary-statistics/mapping_statement_count_by_predicate", "datamodels/summary-statistics/mapping_statement_count_subject_by_object_source", "datamodels/summary-statistics/merged_class_count", "datamodels/summary-statistics/metadata_statistic_group", "datamodels/summary-statistics/named_individual_count", "datamodels/summary-statistics/non_deprecated_class_count", "datamodels/summary-statistics/non_deprecated_object_property_count", "datamodels/summary-statistics/normalization_comments", "datamodels/summary-statistics/object_property_count", "datamodels/summary-statistics/ontologies", "datamodels/summary-statistics/ontology_count", "datamodels/summary-statistics/owl_axiom_count", "datamodels/summary-statistics/owl_statistic_group", "datamodels/summary-statistics/partitions", "datamodels/summary-statistics/prefix", "datamodels/summary-statistics/property_count", "datamodels/summary-statistics/property_statistic_group", "datamodels/summary-statistics/rdf_triple_count", "datamodels/summary-statistics/role_counts", "datamodels/summary-statistics/started_at_time", "datamodels/summary-statistics/subclass_of_axiom_count", "datamodels/summary-statistics/subset_count", "datamodels/summary-statistics/summary-statistics", "datamodels/summary-statistics/synonym_statement_count", "datamodels/summary-statistics/synonym_statement_count_by_predicate", "datamodels/summary-statistics/title", "datamodels/summary-statistics/types", "datamodels/summary-statistics/unsatisfiable_class_count", "datamodels/summary-statistics/untyped_entity_count", "datamodels/summary-statistics/version", "datamodels/summary-statistics/version_info", "datamodels/summary-statistics/was_associated_with", "datamodels/summary-statistics/was_generated_by", "datamodels/taxon-constraints/Boolean", "datamodels/taxon-constraints/ConfigurationOption", "datamodels/taxon-constraints/Curie", "datamodels/taxon-constraints/Date", "datamodels/taxon-constraints/DateOrDatetime", "datamodels/taxon-constraints/Datetime", "datamodels/taxon-constraints/Decimal", "datamodels/taxon-constraints/Double", "datamodels/taxon-constraints/Float", "datamodels/taxon-constraints/Integer", "datamodels/taxon-constraints/Jsonpath", "datamodels/taxon-constraints/Jsonpointer", "datamodels/taxon-constraints/Ncname", "datamodels/taxon-constraints/Nodeidentifier", "datamodels/taxon-constraints/Objectidentifier", "datamodels/taxon-constraints/PredicateTerm", "datamodels/taxon-constraints/Sparqlpath", "datamodels/taxon-constraints/String", "datamodels/taxon-constraints/SubjectTerm", "datamodels/taxon-constraints/Taxon", "datamodels/taxon-constraints/TaxonConstraint", "datamodels/taxon-constraints/Term", "datamodels/taxon-constraints/Time", "datamodels/taxon-constraints/Uri", "datamodels/taxon-constraints/Uriorcurie", "datamodels/taxon-constraints/asserted", "datamodels/taxon-constraints/candidate", "datamodels/taxon-constraints/comments", "datamodels/taxon-constraints/contradicted_by", "datamodels/taxon-constraints/description", "datamodels/taxon-constraints/evolutionary", "datamodels/taxon-constraints/id", "datamodels/taxon-constraints/index", "datamodels/taxon-constraints/label", "datamodels/taxon-constraints/never_in", "datamodels/taxon-constraints/only_in", "datamodels/taxon-constraints/predicate", "datamodels/taxon-constraints/predicates", "datamodels/taxon-constraints/present_in", "datamodels/taxon-constraints/present_in_ancestor_of", "datamodels/taxon-constraints/redundant", "datamodels/taxon-constraints/redundant_with", "datamodels/taxon-constraints/redundant_with_only_in", "datamodels/taxon-constraints/sources", "datamodels/taxon-constraints/subject", "datamodels/taxon-constraints/taxon", "datamodels/taxon-constraints/taxon-constraints", "datamodels/taxon-constraints/unsatisfiable", "datamodels/taxon-constraints/via_terms", "datamodels/text-annotator/Boolean", "datamodels/text-annotator/Curie", "datamodels/text-annotator/Date", "datamodels/text-annotator/DateOrDatetime", "datamodels/text-annotator/Datetime", "datamodels/text-annotator/Decimal", "datamodels/text-annotator/Double", "datamodels/text-annotator/Float", "datamodels/text-annotator/HasSpan", "datamodels/text-annotator/Integer", "datamodels/text-annotator/Jsonpath", "datamodels/text-annotator/Jsonpointer", "datamodels/text-annotator/Ncname", "datamodels/text-annotator/Nodeidentifier", "datamodels/text-annotator/Objectidentifier", "datamodels/text-annotator/Position", "datamodels/text-annotator/Sparqlpath", "datamodels/text-annotator/String", "datamodels/text-annotator/TextAnnotation", "datamodels/text-annotator/TextAnnotationConfiguration", "datamodels/text-annotator/TextAnnotationResultSet", "datamodels/text-annotator/TextualElement", "datamodels/text-annotator/Time", "datamodels/text-annotator/TransformationType", "datamodels/text-annotator/Uri", "datamodels/text-annotator/Uriorcurie", "datamodels/text-annotator/annotations", "datamodels/text-annotator/categories", "datamodels/text-annotator/confidence", "datamodels/text-annotator/id", "datamodels/text-annotator/include_aliases", "datamodels/text-annotator/index", "datamodels/text-annotator/info", "datamodels/text-annotator/is_longest_match", "datamodels/text-annotator/limit", "datamodels/text-annotator/match_string", "datamodels/text-annotator/match_type", "datamodels/text-annotator/matches_whole_text", "datamodels/text-annotator/model", "datamodels/text-annotator/object_aliases", "datamodels/text-annotator/object_categories", "datamodels/text-annotator/object_id", "datamodels/text-annotator/object_label", "datamodels/text-annotator/object_source", "datamodels/text-annotator/parent_document", "datamodels/text-annotator/predicate_id", "datamodels/text-annotator/source_text", "datamodels/text-annotator/sources", "datamodels/text-annotator/subject_end", "datamodels/text-annotator/subject_label", "datamodels/text-annotator/subject_source", "datamodels/text-annotator/subject_start", "datamodels/text-annotator/subject_text_id", "datamodels/text-annotator/text", "datamodels/text-annotator/text-annotator", "datamodels/text-annotator/token_exclusion_list", "datamodels/text-annotator/types", "datamodels/validation/Boolean", "datamodels/validation/ConstraintComponent", "datamodels/validation/Curie", "datamodels/validation/Date", "datamodels/validation/DateOrDatetime", "datamodels/validation/Datetime", "datamodels/validation/Decimal", "datamodels/validation/Double", "datamodels/validation/ExternalReferenceValidationResult", "datamodels/validation/Float", "datamodels/validation/Integer", "datamodels/validation/Jsonpath", "datamodels/validation/Jsonpointer", "datamodels/validation/MappingValidationResult", "datamodels/validation/NamedResource", "datamodels/validation/Ncname", "datamodels/validation/Node", "datamodels/validation/Nodeidentifier", "datamodels/validation/Objectidentifier", "datamodels/validation/RepairConfiguration", "datamodels/validation/RepairOperation", "datamodels/validation/RepairReport", "datamodels/validation/Report", "datamodels/validation/Result", "datamodels/validation/SeverityOptions", "datamodels/validation/Sparqlpath", "datamodels/validation/String", "datamodels/validation/Time", "datamodels/validation/TypeSeverityKeyValue", "datamodels/validation/Uri", "datamodels/validation/Uriorcurie", "datamodels/validation/ValidationConfiguration", "datamodels/validation/ValidationReport", "datamodels/validation/ValidationResult", "datamodels/validation/ValidationResultType", "datamodels/validation/category", "datamodels/validation/confidence", "datamodels/validation/dry_run", "datamodels/validation/http_response_code", "datamodels/validation/id", "datamodels/validation/index", "datamodels/validation/info", "datamodels/validation/instantiates", "datamodels/validation/max_number_results_per_type", "datamodels/validation/modified", "datamodels/validation/number_of_attempts", "datamodels/validation/object", "datamodels/validation/object_id", "datamodels/validation/object_info", "datamodels/validation/object_str", "datamodels/validation/predicate", "datamodels/validation/predicate_id", "datamodels/validation/problem", "datamodels/validation/prompt_info", "datamodels/validation/repairs", "datamodels/validation/results", "datamodels/validation/schema_path", "datamodels/validation/severity", "datamodels/validation/source", "datamodels/validation/subject", "datamodels/validation/subject_id", "datamodels/validation/subject_info", "datamodels/validation/successful", "datamodels/validation/suggested_modifications", "datamodels/validation/suggested_predicate", "datamodels/validation/time_checked", "datamodels/validation/type", "datamodels/validation/type_severity_map", "datamodels/validation/types", "datamodels/validation/url", "datamodels/validation/validation_configuration", "datamodels/validation/validaton-results", "faq/architecture", "faq/commandline", "faq/contributing", "faq/general", "faq/index", "faq/ontologies", "faq/troubleshooting", "glossary", "guide/aliases", "guide/associations", "guide/basics", "guide/curies-and-uris", "guide/index", "guide/learning-more", "guide/logical-definitions", "guide/mappings", "guide/obsoletion", "guide/primary-labels", "guide/relationships-and-graphs", "guide/similarity", "howtos/fhir-conversions", "howtos/index", "howtos/perform-lexical-matching", "howtos/roll-up-annotations-to-a-subset", "howtos/use-llms", "howtos/validate-an-obo-ontology", "howtos/visualize-ontology-subgraphs", "howtos/write-a-plugin", "index", "intro/index", "intro/tutorial01", "intro/tutorial02", "intro/tutorial03", "intro/tutorial04", "intro/tutorial05", "intro/tutorial06", "intro/tutorial07", "intro/tutorial08", "introduction", "logos/README", "notebooks", "packages/architecture", "packages/best-practice", "packages/converters/data-model-converter", "packages/converters/index", "packages/converters/obo-graph-to-cx", "packages/converters/obo-graph-to-fhir", "packages/converters/obo-graph-to-obo-format", "packages/converters/obo-graph-to-owl", "packages/implementations/aggregator", "packages/implementations/bioportal", "packages/implementations/funowl", "packages/implementations/gilda", "packages/implementations/index", "packages/implementations/llm", "packages/implementations/obograph", "packages/implementations/ols", "packages/implementations/ontobee", "packages/implementations/owlery", "packages/implementations/pantherdb", "packages/implementations/pronto", "packages/implementations/robot-template", "packages/implementations/simple_obo", "packages/implementations/sparql", "packages/implementations/sqldb", "packages/implementations/ubergraph", "packages/index", "packages/interfaces/association-provider", "packages/interfaces/basic", "packages/interfaces/class-enrichment", "packages/interfaces/differ", "packages/interfaces/dumper", "packages/interfaces/index", "packages/interfaces/mapping-provider", "packages/interfaces/obograph", "packages/interfaces/owl", "packages/interfaces/patcher", "packages/interfaces/relation-graph", "packages/interfaces/search", "packages/interfaces/semantic-similarity", "packages/interfaces/subsetting", "packages/interfaces/summary-statistics", "packages/interfaces/text-annotator", "packages/interfaces/validator", "packages/selectors", "packages/src/oaklib.utilities.apikey_manager", "packages/src/oaklib.utilities.graph.networkx_bridge", "packages/src/oaklib.utilities.graph.relationship_walker", "packages/src/oaklib.utilities.lexical.lexical_indexer", "packages/src/oaklib.utilities.obograph_utils", "packages/src/oaklib.utilities.subsets.slimmer_utils", "packages/src/oaklib.utilities.table_filler", "packages/src/oaklib.utilities.taxon", "packages/utilities", "rdf-owl-layering", "search-syntax"], "filenames": ["cli.rst", "concepts.rst", "contributing.md", "datamodels/association/Association.md", "datamodels/association/AssociationChange.md", "datamodels/association/Boolean.md", "datamodels/association/Curie.md", "datamodels/association/Date.md", "datamodels/association/DateOrDatetime.md", "datamodels/association/Datetime.md", "datamodels/association/Decimal.md", "datamodels/association/Double.md", "datamodels/association/Float.md", "datamodels/association/Integer.md", "datamodels/association/Jsonpath.md", "datamodels/association/Jsonpointer.md", "datamodels/association/Ncname.md", "datamodels/association/NegatedAssociation.md", "datamodels/association/Nodeidentifier.md", "datamodels/association/Objectidentifier.md", "datamodels/association/PairwiseCoAssociation.md", "datamodels/association/ParserConfiguration.md", "datamodels/association/PositiveOrNegativeAssociation.md", "datamodels/association/PropertyValue.md", "datamodels/association/RollupGroup.md", "datamodels/association/Sparqlpath.md", "datamodels/association/String.md", "datamodels/association/Time.md", "datamodels/association/Uri.md", "datamodels/association/Uriorcurie.md", "datamodels/association/aggregator_knowledge_source.md", "datamodels/association/association.md", "datamodels/association/associations.md", "datamodels/association/associations_for_subjects_in_common.md", "datamodels/association/closure_delta.md", "datamodels/association/closure_information_content_delta.md", "datamodels/association/closure_predicates.md", "datamodels/association/comments.md", "datamodels/association/core_triple.md", "datamodels/association/creation_date.md", "datamodels/association/date.md", "datamodels/association/denormalized_slot.md", "datamodels/association/diff_slot.md", "datamodels/association/evidence_type.md", "datamodels/association/group_object.md", "datamodels/association/include_association_attributes.md", "datamodels/association/index.md", "datamodels/association/is_creation.md", "datamodels/association/is_deletion.md", "datamodels/association/is_generalization.md", "datamodels/association/is_migration.md", "datamodels/association/is_specialization.md", "datamodels/association/modification_date.md", "datamodels/association/negated.md", "datamodels/association/new_date.md", "datamodels/association/new_object.md", "datamodels/association/new_predicate.md", "datamodels/association/number_subject_unique_to_entity1.md", "datamodels/association/number_subject_unique_to_entity2.md", "datamodels/association/number_subjects_in_common.md", "datamodels/association/number_subjects_in_union.md", "datamodels/association/object.md", "datamodels/association/object1.md", "datamodels/association/object1_label.md", "datamodels/association/object2.md", "datamodels/association/object2_label.md", "datamodels/association/object_closure.md", "datamodels/association/object_closure_label.md", "datamodels/association/object_label.md", "datamodels/association/old_date.md", "datamodels/association/old_object.md", "datamodels/association/old_object_obsolete.md", "datamodels/association/old_predicate.md", "datamodels/association/original_object.md", "datamodels/association/original_predicate.md", "datamodels/association/original_subject.md", "datamodels/association/predicate.md", "datamodels/association/predicate_label.md", "datamodels/association/preserve_negated_associations.md", "datamodels/association/primary_knowledge_source.md", "datamodels/association/property_values.md", "datamodels/association/proportion_subjects_in_common.md", "datamodels/association/publication_is_added.md", "datamodels/association/publication_is_deleted.md", "datamodels/association/publications.md", "datamodels/association/sub_groups.md", "datamodels/association/subject.md", "datamodels/association/subject_closure.md", "datamodels/association/subject_closure_label.md", "datamodels/association/subject_label.md", "datamodels/association/subjects_in_common.md", "datamodels/association/summary_group.md", "datamodels/association/supporting_objects.md", "datamodels/class-enrichment/Boolean.md", "datamodels/class-enrichment/ClassEnrichmentConfiguration.md", "datamodels/class-enrichment/ClassEnrichmentResult.md", "datamodels/class-enrichment/ClassEnrichmentResultSet.md", "datamodels/class-enrichment/Curie.md", "datamodels/class-enrichment/Date.md", "datamodels/class-enrichment/DateOrDatetime.md", "datamodels/class-enrichment/Datetime.md", "datamodels/class-enrichment/Decimal.md", "datamodels/class-enrichment/Double.md", "datamodels/class-enrichment/Float.md", "datamodels/class-enrichment/Integer.md", "datamodels/class-enrichment/Jsonpath.md", "datamodels/class-enrichment/Jsonpointer.md", "datamodels/class-enrichment/Ncname.md", "datamodels/class-enrichment/Nodeidentifier.md", "datamodels/class-enrichment/Objectidentifier.md", "datamodels/class-enrichment/Position.md", "datamodels/class-enrichment/SortFieldEnum.md", "datamodels/class-enrichment/Sparqlpath.md", "datamodels/class-enrichment/String.md", "datamodels/class-enrichment/Time.md", "datamodels/class-enrichment/Uri.md", "datamodels/class-enrichment/Uriorcurie.md", "datamodels/class-enrichment/ancestor_of_more_informative_result.md", "datamodels/class-enrichment/background_count.md", "datamodels/class-enrichment/background_total.md", "datamodels/class-enrichment/class-enrichment.md", "datamodels/class-enrichment/class_id.md", "datamodels/class-enrichment/class_label.md", "datamodels/class-enrichment/descendant_of_more_informative_result.md", "datamodels/class-enrichment/direction.md", "datamodels/class-enrichment/false_discovery_rate.md", "datamodels/class-enrichment/fold_enrichment.md", "datamodels/class-enrichment/index.md", "datamodels/class-enrichment/p_value.md", "datamodels/class-enrichment/p_value_adjusted.md", "datamodels/class-enrichment/p_value_cutoff.md", "datamodels/class-enrichment/probability.md", "datamodels/class-enrichment/rank.md", "datamodels/class-enrichment/results.md", "datamodels/class-enrichment/sample_count.md", "datamodels/class-enrichment/sample_total.md", "datamodels/cross-ontology-diff/Boolean.md", "datamodels/cross-ontology-diff/Curie.md", "datamodels/cross-ontology-diff/Date.md", "datamodels/cross-ontology-diff/DateOrDatetime.md", "datamodels/cross-ontology-diff/Datetime.md", "datamodels/cross-ontology-diff/Decimal.md", "datamodels/cross-ontology-diff/DiffCategory.md", "datamodels/cross-ontology-diff/Double.md", "datamodels/cross-ontology-diff/EntityReference.md", "datamodels/cross-ontology-diff/Float.md", "datamodels/cross-ontology-diff/Integer.md", "datamodels/cross-ontology-diff/Jsonpath.md", "datamodels/cross-ontology-diff/Jsonpointer.md", "datamodels/cross-ontology-diff/Label.md", "datamodels/cross-ontology-diff/MappingCardinalityEnum.md", "datamodels/cross-ontology-diff/Ncname.md", "datamodels/cross-ontology-diff/Nodeidentifier.md", "datamodels/cross-ontology-diff/Objectidentifier.md", "datamodels/cross-ontology-diff/Position.md", "datamodels/cross-ontology-diff/RelationalDiff.md", "datamodels/cross-ontology-diff/Source.md", "datamodels/cross-ontology-diff/Sparqlpath.md", "datamodels/cross-ontology-diff/String.md", "datamodels/cross-ontology-diff/StructureDiffResultSet.md", "datamodels/cross-ontology-diff/Time.md", "datamodels/cross-ontology-diff/Uri.md", "datamodels/cross-ontology-diff/Uriorcurie.md", "datamodels/cross-ontology-diff/category.md", "datamodels/cross-ontology-diff/cross-ontology-diff.md", "datamodels/cross-ontology-diff/index.md", "datamodels/cross-ontology-diff/is_functional.md", "datamodels/cross-ontology-diff/label.md", "datamodels/cross-ontology-diff/left_object_id.md", "datamodels/cross-ontology-diff/left_object_is_functional.md", "datamodels/cross-ontology-diff/left_object_label.md", "datamodels/cross-ontology-diff/left_object_name.md", "datamodels/cross-ontology-diff/left_predicate_id.md", "datamodels/cross-ontology-diff/left_predicate_label.md", "datamodels/cross-ontology-diff/left_predicate_name.md", "datamodels/cross-ontology-diff/left_side.md", "datamodels/cross-ontology-diff/left_source.md", "datamodels/cross-ontology-diff/left_subject_id.md", "datamodels/cross-ontology-diff/left_subject_is_functional.md", "datamodels/cross-ontology-diff/left_subject_label.md", "datamodels/cross-ontology-diff/left_subject_name.md", "datamodels/cross-ontology-diff/object.md", "datamodels/cross-ontology-diff/object_mapping_cardinality.md", "datamodels/cross-ontology-diff/object_mapping_predicate.md", "datamodels/cross-ontology-diff/predicate.md", "datamodels/cross-ontology-diff/results.md", "datamodels/cross-ontology-diff/right_intermediate_ids.md", "datamodels/cross-ontology-diff/right_object_id.md", "datamodels/cross-ontology-diff/right_object_label.md", "datamodels/cross-ontology-diff/right_object_name.md", "datamodels/cross-ontology-diff/right_predicate_ids.md", "datamodels/cross-ontology-diff/right_predicate_labels.md", "datamodels/cross-ontology-diff/right_predicate_names.md", "datamodels/cross-ontology-diff/right_side.md", "datamodels/cross-ontology-diff/right_source.md", "datamodels/cross-ontology-diff/right_subject_id.md", "datamodels/cross-ontology-diff/right_subject_label.md", "datamodels/cross-ontology-diff/right_subject_name.md", "datamodels/cross-ontology-diff/side.md", "datamodels/cross-ontology-diff/subject.md", "datamodels/cross-ontology-diff/subject_mapping_cardinality.md", "datamodels/cross-ontology-diff/subject_mapping_predicate.md", "datamodels/cross-ontology-diff/types.md", "datamodels/funowl/index.rst", "datamodels/index.rst", "datamodels/item-list/Boolean.md", "datamodels/item-list/Curie.md", "datamodels/item-list/Date.md", "datamodels/item-list/DateOrDatetime.md", "datamodels/item-list/Datetime.md", "datamodels/item-list/Decimal.md", "datamodels/item-list/Double.md", "datamodels/item-list/Float.md", "datamodels/item-list/Integer.md", "datamodels/item-list/ItemList.md", "datamodels/item-list/ItemListCollection.md", "datamodels/item-list/ItemListOrderType.md", "datamodels/item-list/Jsonpath.md", "datamodels/item-list/Jsonpointer.md", "datamodels/item-list/ListItem.md", "datamodels/item-list/Ncname.md", "datamodels/item-list/Nodeidentifier.md", "datamodels/item-list/Objectidentifier.md", "datamodels/item-list/Sparqlpath.md", "datamodels/item-list/String.md", "datamodels/item-list/Thing.md", "datamodels/item-list/Time.md", "datamodels/item-list/Uri.md", "datamodels/item-list/Uriorcurie.md", "datamodels/item-list/additionalType.md", "datamodels/item-list/categories.md", "datamodels/item-list/description.md", "datamodels/item-list/elementId.md", "datamodels/item-list/id.md", "datamodels/item-list/idType.md", "datamodels/item-list/identifiers.md", "datamodels/item-list/index.md", "datamodels/item-list/item.md", "datamodels/item-list/itemList.md", "datamodels/item-list/itemListElements.md", "datamodels/item-list/itemLists.md", "datamodels/item-list/itemMetadataMap.md", "datamodels/item-list/keywords.md", "datamodels/item-list/name.md", "datamodels/item-list/numberOfItems.md", "datamodels/item-list/position.md", "datamodels/item-list/previousItem.md", "datamodels/item-list/type.md", "datamodels/item-list/url.md", "datamodels/item-list/wasGeneratedBy.md", "datamodels/kgcl/index.rst", "datamodels/lexical-index/Activity.md", "datamodels/lexical-index/Any.md", "datamodels/lexical-index/Boolean.md", "datamodels/lexical-index/Curie.md", "datamodels/lexical-index/Date.md", "datamodels/lexical-index/DateOrDatetime.md", "datamodels/lexical-index/Datetime.md", "datamodels/lexical-index/Decimal.md", "datamodels/lexical-index/Double.md", "datamodels/lexical-index/Float.md", "datamodels/lexical-index/Integer.md", "datamodels/lexical-index/Jsonpath.md", "datamodels/lexical-index/Jsonpointer.md", "datamodels/lexical-index/LexicalGrouping.md", "datamodels/lexical-index/LexicalIndex.md", "datamodels/lexical-index/LexicalTransformation.md", "datamodels/lexical-index/LexicalTransformationPipeline.md", "datamodels/lexical-index/Ncname.md", "datamodels/lexical-index/Nodeidentifier.md", "datamodels/lexical-index/Objectidentifier.md", "datamodels/lexical-index/RelationshipToTerm.md", "datamodels/lexical-index/Sparqlpath.md", "datamodels/lexical-index/String.md", "datamodels/lexical-index/Time.md", "datamodels/lexical-index/TransformationType.md", "datamodels/lexical-index/Uri.md", "datamodels/lexical-index/Uriorcurie.md", "datamodels/lexical-index/element.md", "datamodels/lexical-index/element_term.md", "datamodels/lexical-index/groupings.md", "datamodels/lexical-index/index.md", "datamodels/lexical-index/lexical-index.md", "datamodels/lexical-index/lexican-index.md", "datamodels/lexical-index/name.md", "datamodels/lexical-index/params.md", "datamodels/lexical-index/pipeline.md", "datamodels/lexical-index/pipelines.md", "datamodels/lexical-index/predicate.md", "datamodels/lexical-index/relationships.md", "datamodels/lexical-index/source.md", "datamodels/lexical-index/synonymized.md", "datamodels/lexical-index/term.md", "datamodels/lexical-index/transformations.md", "datamodels/lexical-index/type.md", "datamodels/lexical-index/types.md", "datamodels/mapping-rules/Activity.md", "datamodels/mapping-rules/Any.md", "datamodels/mapping-rules/Boolean.md", "datamodels/mapping-rules/Curie.md", "datamodels/mapping-rules/Date.md", "datamodels/mapping-rules/DateOrDatetime.md", "datamodels/mapping-rules/Datetime.md", "datamodels/mapping-rules/Decimal.md", "datamodels/mapping-rules/Double.md", "datamodels/mapping-rules/Float.md", "datamodels/mapping-rules/Integer.md", "datamodels/mapping-rules/Jsonpath.md", "datamodels/mapping-rules/Jsonpointer.md", "datamodels/mapping-rules/LexicalGrouping.md", "datamodels/mapping-rules/LexicalIndex.md", "datamodels/mapping-rules/LexicalTransformation.md", "datamodels/mapping-rules/LexicalTransformationPipeline.md", "datamodels/mapping-rules/MappingRule.md", "datamodels/mapping-rules/MappingRuleCollection.md", "datamodels/mapping-rules/Ncname.md", "datamodels/mapping-rules/Nodeidentifier.md", "datamodels/mapping-rules/Objectidentifier.md", "datamodels/mapping-rules/Postcondition.md", "datamodels/mapping-rules/Precondition.md", "datamodels/mapping-rules/RelationshipToTerm.md", "datamodels/mapping-rules/Sparqlpath.md", "datamodels/mapping-rules/String.md", "datamodels/mapping-rules/Synonymizer.md", "datamodels/mapping-rules/Test.md", "datamodels/mapping-rules/Time.md", "datamodels/mapping-rules/TransformationType.md", "datamodels/mapping-rules/Uri.md", "datamodels/mapping-rules/Uriorcurie.md", "datamodels/mapping-rules/description.md", "datamodels/mapping-rules/element.md", "datamodels/mapping-rules/element_term.md", "datamodels/mapping-rules/groupings.md", "datamodels/mapping-rules/index.md", "datamodels/mapping-rules/input.md", "datamodels/mapping-rules/lexical-index.md", "datamodels/mapping-rules/lexican-index.md", "datamodels/mapping-rules/mapping-rules.md", "datamodels/mapping-rules/mapping-rules-datamodel.md", "datamodels/mapping-rules/mapping_source_one_of.md", "datamodels/mapping-rules/match.md", "datamodels/mapping-rules/match_scope.md", "datamodels/mapping-rules/minimum_confidence.md", "datamodels/mapping-rules/name.md", "datamodels/mapping-rules/object_match_field_one_of.md", "datamodels/mapping-rules/object_source_one_of.md", "datamodels/mapping-rules/oneway.md", "datamodels/mapping-rules/output.md", "datamodels/mapping-rules/params.md", "datamodels/mapping-rules/pipeline.md", "datamodels/mapping-rules/pipelines.md", "datamodels/mapping-rules/postconditions.md", "datamodels/mapping-rules/preconditions.md", "datamodels/mapping-rules/predicate.md", "datamodels/mapping-rules/predicate_id.md", "datamodels/mapping-rules/predicate_id_one_of.md", "datamodels/mapping-rules/prefix.md", "datamodels/mapping-rules/qualifier.md", "datamodels/mapping-rules/relationships.md", "datamodels/mapping-rules/replacement.md", "datamodels/mapping-rules/rules.md", "datamodels/mapping-rules/source.md", "datamodels/mapping-rules/subject_match_field_one_of.md", "datamodels/mapping-rules/subject_source_one_of.md", "datamodels/mapping-rules/synonymized.md", "datamodels/mapping-rules/synonymizer.md", "datamodels/mapping-rules/term.md", "datamodels/mapping-rules/tests.md", "datamodels/mapping-rules/the_rule.md", "datamodels/mapping-rules/transformations.md", "datamodels/mapping-rules/transformations_included_in.md", "datamodels/mapping-rules/type.md", "datamodels/mapping-rules/types.md", "datamodels/mapping-rules/weight.md", "datamodels/obograph/Axiom.md", "datamodels/obograph/BasicPropertyValue.md", "datamodels/obograph/Boolean.md", "datamodels/obograph/Curie.md", "datamodels/obograph/Date.md", "datamodels/obograph/DateOrDatetime.md", "datamodels/obograph/Datetime.md", "datamodels/obograph/Decimal.md", "datamodels/obograph/DefinitionPropertyValue.md", "datamodels/obograph/DisjointClassExpressionsAxiom.md", "datamodels/obograph/DomainRangeAxiom.md", "datamodels/obograph/Double.md", "datamodels/obograph/Edge.md", "datamodels/obograph/EquivalentNodesSet.md", "datamodels/obograph/ExistentialRestrictionExpression.md", "datamodels/obograph/Float.md", "datamodels/obograph/Graph.md", "datamodels/obograph/GraphDocument.md", "datamodels/obograph/Integer.md", "datamodels/obograph/Jsonpath.md", "datamodels/obograph/Jsonpointer.md", "datamodels/obograph/LogicalDefinitionAxiom.md", "datamodels/obograph/Meta.md", "datamodels/obograph/Ncname.md", "datamodels/obograph/Node.md", "datamodels/obograph/NodeTypeEnum.md", "datamodels/obograph/Nodeidentifier.md", "datamodels/obograph/Objectidentifier.md", "datamodels/obograph/OboIdentifierString.md", "datamodels/obograph/PredsEnum.md", "datamodels/obograph/PrefixDeclaration.md", "datamodels/obograph/PropertyChainAxiom.md", "datamodels/obograph/PropertyTypeEnum.md", "datamodels/obograph/PropertyValue.md", "datamodels/obograph/ScopeEnum.md", "datamodels/obograph/ScopesEnum.md", "datamodels/obograph/Sparqlpath.md", "datamodels/obograph/String.md", "datamodels/obograph/SubsetDefinition.md", "datamodels/obograph/SynonymPropertyValue.md", "datamodels/obograph/SynonymTypeDefinition.md", "datamodels/obograph/SynonymTypeIdentifierString.md", "datamodels/obograph/Time.md", "datamodels/obograph/Uri.md", "datamodels/obograph/Uriorcurie.md", "datamodels/obograph/XrefPropertyValue.md", "datamodels/obograph/XrefString.md", "datamodels/obograph/allValuesFromEdges.md", "datamodels/obograph/basicPropertyValues.md", "datamodels/obograph/chainPredicateIds.md", "datamodels/obograph/classExpressions.md", "datamodels/obograph/classIds.md", "datamodels/obograph/comments.md", "datamodels/obograph/definedClassId.md", "datamodels/obograph/definition.md", "datamodels/obograph/deprecated.md", "datamodels/obograph/disjointClassExpressionsAxioms.md", "datamodels/obograph/domainClassIds.md", "datamodels/obograph/domainRangeAxioms.md", "datamodels/obograph/edges.md", "datamodels/obograph/equivalentNodesSets.md", "datamodels/obograph/fillerId.md", "datamodels/obograph/genusIds.md", "datamodels/obograph/graphs.md", "datamodels/obograph/id.md", "datamodels/obograph/index.md", "datamodels/obograph/isExact.md", "datamodels/obograph/label.md", "datamodels/obograph/lang.md", "datamodels/obograph/lbl.md", "datamodels/obograph/logicalDefinitionAxioms.md", "datamodels/obograph/meta.md", "datamodels/obograph/namespace.md", "datamodels/obograph/nodeIds.md", "datamodels/obograph/nodes.md", "datamodels/obograph/obj.md", "datamodels/obograph/obographs_datamodel.md", "datamodels/obograph/obographs_linkml_model.md", "datamodels/obograph/pred.md", "datamodels/obograph/predicateId.md", "datamodels/obograph/prefix.md", "datamodels/obograph/prefixes.md", "datamodels/obograph/propertyChainAxioms.md", "datamodels/obograph/propertyId.md", "datamodels/obograph/propertyType.md", "datamodels/obograph/rangeClassIds.md", "datamodels/obograph/representativeNodeId.md", "datamodels/obograph/representitiveNodeId.md", "datamodels/obograph/restrictions.md", "datamodels/obograph/scope.md", "datamodels/obograph/sub.md", "datamodels/obograph/subsetDefinitions.md", "datamodels/obograph/subsets.md", "datamodels/obograph/synonymType.md", "datamodels/obograph/synonymTypeDefinitions.md", "datamodels/obograph/synonyms.md", "datamodels/obograph/type.md", "datamodels/obograph/types.md", "datamodels/obograph/unionEquivalentTo.md", "datamodels/obograph/unionEquivalentToExpression.md", "datamodels/obograph/val.md", "datamodels/obograph/valType.md", "datamodels/obograph/version.md", "datamodels/obograph/xrefs.md", "datamodels/ontology-metadata/Agent.md", "datamodels/ontology-metadata/AllotropePermittedProfile.md", "datamodels/ontology-metadata/AllotropeRequiredProfile.md", "datamodels/ontology-metadata/Annotation.md", "datamodels/ontology-metadata/AnnotationProperty.md", "datamodels/ontology-metadata/AnnotationPropertyMixin.md", "datamodels/ontology-metadata/Anonymous.md", "datamodels/ontology-metadata/AnonymousClassExpression.md", "datamodels/ontology-metadata/Any.md", "datamodels/ontology-metadata/Axiom.md", "datamodels/ontology-metadata/Boolean.md", "datamodels/ontology-metadata/CURIELiteral.md", "datamodels/ontology-metadata/Class.md", "datamodels/ontology-metadata/ClassExpression.md", "datamodels/ontology-metadata/Curie.md", "datamodels/ontology-metadata/Date.md", "datamodels/ontology-metadata/DateOrDatetime.md", "datamodels/ontology-metadata/Datetime.md", "datamodels/ontology-metadata/Decimal.md", "datamodels/ontology-metadata/DefinitionConstraintComponent.md", "datamodels/ontology-metadata/Double.md", "datamodels/ontology-metadata/Expression.md", "datamodels/ontology-metadata/Float.md", "datamodels/ontology-metadata/GoPermittedProfile.md", "datamodels/ontology-metadata/GoRecommendedProfile.md", "datamodels/ontology-metadata/GoRequiredProfile.md", "datamodels/ontology-metadata/HasCategory.md", "datamodels/ontology-metadata/HasLifeCycle.md", "datamodels/ontology-metadata/HasMappings.md", "datamodels/ontology-metadata/HasMinimalMetadata.md", "datamodels/ontology-metadata/HasProvenance.md", "datamodels/ontology-metadata/HasSynonyms.md", "datamodels/ontology-metadata/HasUserInformation.md", "datamodels/ontology-metadata/HomoSapiens.md", "datamodels/ontology-metadata/IEDB_alternative_term.md", "datamodels/ontology-metadata/ISA_alternative_term.md", "datamodels/ontology-metadata/Image.md", "datamodels/ontology-metadata/Integer.md", "datamodels/ontology-metadata/IriType.md", "datamodels/ontology-metadata/Jsonpath.md", "datamodels/ontology-metadata/Jsonpointer.md", "datamodels/ontology-metadata/LabelType.md", "datamodels/ontology-metadata/NCIT_definition_source.md", "datamodels/ontology-metadata/NCIT_term_source.md", "datamodels/ontology-metadata/NCIT_term_type.md", "datamodels/ontology-metadata/NamedIndividual.md", "datamodels/ontology-metadata/NamedObject.md", "datamodels/ontology-metadata/NarrativeText.md", "datamodels/ontology-metadata/Ncname.md", "datamodels/ontology-metadata/Nodeidentifier.md", "datamodels/ontology-metadata/NotObsoleteAspect.md", "datamodels/ontology-metadata/OBO_foundry_unique_label.md", "datamodels/ontology-metadata/ObiPermittedProfile.md", "datamodels/ontology-metadata/ObiRequiredProfile.md", "datamodels/ontology-metadata/ObjectProperty.md", "datamodels/ontology-metadata/Objectidentifier.md", "datamodels/ontology-metadata/ObsoleteAspect.md", "datamodels/ontology-metadata/Ontology.md", "datamodels/ontology-metadata/Ontology-Metadata.md", "datamodels/ontology-metadata/Property.md", "datamodels/ontology-metadata/PropertyExpression.md", "datamodels/ontology-metadata/Restriction.md", "datamodels/ontology-metadata/Sparqlpath.md", "datamodels/ontology-metadata/String.md", "datamodels/ontology-metadata/Subset.md", "datamodels/ontology-metadata/Term.md", "datamodels/ontology-metadata/Thing.md", "datamodels/ontology-metadata/TidyString.md", "datamodels/ontology-metadata/Time.md", "datamodels/ontology-metadata/TransitiveProperty.md", "datamodels/ontology-metadata/URLLiteral.md", "datamodels/ontology-metadata/Uri.md", "datamodels/ontology-metadata/Uriorcurie.md", "datamodels/ontology-metadata/allValuesFrom.md", "datamodels/ontology-metadata/alternative_term.md", "datamodels/ontology-metadata/annotatedProperty.md", "datamodels/ontology-metadata/annotatedSource.md", "datamodels/ontology-metadata/annotatedTarget.md", "datamodels/ontology-metadata/annotations.md", "datamodels/ontology-metadata/broadMatch.md", "datamodels/ontology-metadata/cardinality.md", "datamodels/ontology-metadata/category.md", "datamodels/ontology-metadata/changeNote.md", "datamodels/ontology-metadata/closeMatch.md", "datamodels/ontology-metadata/comment.md", "datamodels/ontology-metadata/complementOf.md", "datamodels/ontology-metadata/conformsTo.md", "datamodels/ontology-metadata/consider.md", "datamodels/ontology-metadata/contributor.md", "datamodels/ontology-metadata/core_property.md", "datamodels/ontology-metadata/created.md", "datamodels/ontology-metadata/created_by.md", "datamodels/ontology-metadata/creation_date.md", "datamodels/ontology-metadata/creator.md", "datamodels/ontology-metadata/curator_note.md", "datamodels/ontology-metadata/database_cross_reference.md", "datamodels/ontology-metadata/date.md", "datamodels/ontology-metadata/date_retrieved.md", "datamodels/ontology-metadata/defaultLanguage.md", "datamodels/ontology-metadata/definition.md", "datamodels/ontology-metadata/definition_source.md", "datamodels/ontology-metadata/depicted_by.md", "datamodels/ontology-metadata/deprecated.md", "datamodels/ontology-metadata/disconnected_from.md", "datamodels/ontology-metadata/disjointWith.md", "datamodels/ontology-metadata/distinctMembers.md", "datamodels/ontology-metadata/domain.md", "datamodels/ontology-metadata/editor_note.md", "datamodels/ontology-metadata/editor_preferred_term.md", "datamodels/ontology-metadata/equivalentClass.md", "datamodels/ontology-metadata/equivalentProperty.md", "datamodels/ontology-metadata/evidence.md", "datamodels/ontology-metadata/exactMatch.md", "datamodels/ontology-metadata/example_of_usage.md", "datamodels/ontology-metadata/excluded_axiom.md", "datamodels/ontology-metadata/excluded_from_QC_check.md", "datamodels/ontology-metadata/excluded_subClassOf.md", "datamodels/ontology-metadata/excluded_synonym.md", "datamodels/ontology-metadata/external_ontology.md", "datamodels/ontology-metadata/hasValue.md", "datamodels/ontology-metadata/has_alternative_id.md", "datamodels/ontology-metadata/has_axiom_label.md", "datamodels/ontology-metadata/has_broad_synonym.md", "datamodels/ontology-metadata/has_curation_status.md", "datamodels/ontology-metadata/has_exact_synonym.md", "datamodels/ontology-metadata/has_narrow_synonym.md", "datamodels/ontology-metadata/has_obo_namespace.md", "datamodels/ontology-metadata/has_obsolescence_reason.md", "datamodels/ontology-metadata/has_ontology_root_term.md", "datamodels/ontology-metadata/has_rank.md", "datamodels/ontology-metadata/has_related_synonym.md", "datamodels/ontology-metadata/has_synonym_type.md", "datamodels/ontology-metadata/id.md", "datamodels/ontology-metadata/image.md", "datamodels/ontology-metadata/imported_from.md", "datamodels/ontology-metadata/imports.md", "datamodels/ontology-metadata/in_subset.md", "datamodels/ontology-metadata/index.md", "datamodels/ontology-metadata/informative_property.md", "datamodels/ontology-metadata/intersectionOf.md", "datamodels/ontology-metadata/inverseOf.md", "datamodels/ontology-metadata/isDefinedBy.md", "datamodels/ontology-metadata/is_a_defining_property_chain_axiom.md", "datamodels/ontology-metadata/is_a_defining_property_chain_axiom_where_second_argument_is_reflexive.md", "datamodels/ontology-metadata/is_class_level.md", "datamodels/ontology-metadata/is_cyclic.md", "datamodels/ontology-metadata/is_inferred.md", "datamodels/ontology-metadata/is_metadata_tag.md", "datamodels/ontology-metadata/is_transitive.md", "datamodels/ontology-metadata/label.md", "datamodels/ontology-metadata/language.md", "datamodels/ontology-metadata/license.md", "datamodels/ontology-metadata/logical_predicate.md", "datamodels/ontology-metadata/match.md", "datamodels/ontology-metadata/match_aspect.md", "datamodels/ontology-metadata/maxQualifiedCardinality.md", "datamodels/ontology-metadata/members.md", "datamodels/ontology-metadata/minCardinality.md", "datamodels/ontology-metadata/minQualifiedCardinality.md", "datamodels/ontology-metadata/narrowMatch.md", "datamodels/ontology-metadata/never_in_taxon.md", "datamodels/ontology-metadata/notes.md", "datamodels/ontology-metadata/object.md", "datamodels/ontology-metadata/oboInOwl_id.md", "datamodels/ontology-metadata/oboInOwl_ontology.md", "datamodels/ontology-metadata/obsoletion_related_property.md", "datamodels/ontology-metadata/omo-schema.md", "datamodels/ontology-metadata/onClass.md", "datamodels/ontology-metadata/onProperty.md", "datamodels/ontology-metadata/oneOf.md", "datamodels/ontology-metadata/ontology_term_requester.md", "datamodels/ontology-metadata/page.md", "datamodels/ontology-metadata/predicate.md", "datamodels/ontology-metadata/propertyChainAxiom.md", "datamodels/ontology-metadata/provenance_property.md", "datamodels/ontology-metadata/qualifiedCardinality.md", "datamodels/ontology-metadata/range.md", "datamodels/ontology-metadata/reification_predicate.md", "datamodels/ontology-metadata/sameAs.md", "datamodels/ontology-metadata/seeAlso.md", "datamodels/ontology-metadata/shortcut_annotation_property.md", "datamodels/ontology-metadata/shorthand.md", "datamodels/ontology-metadata/should_conform_to.md", "datamodels/ontology-metadata/someValuesFrom.md", "datamodels/ontology-metadata/source.md", "datamodels/ontology-metadata/subClassOf.md", "datamodels/ontology-metadata/synonym.md", "datamodels/ontology-metadata/temporal_interpretation.md", "datamodels/ontology-metadata/term_editor.md", "datamodels/ontology-metadata/term_replaced_by.md", "datamodels/ontology-metadata/term_tracker_item.md", "datamodels/ontology-metadata/title.md", "datamodels/ontology-metadata/type.md", "datamodels/ontology-metadata/types.md", "datamodels/ontology-metadata/unionOf.md", "datamodels/ontology-metadata/url.md", "datamodels/ontology-metadata/versionIRI.md", "datamodels/ontology-metadata/versionInfo.md", "datamodels/ontology-metadata/version_property.md", "datamodels/search/Boolean.md", "datamodels/search/BooleanOperator.md", "datamodels/search/ComplexQuery.md", "datamodels/search/Curie.md", "datamodels/search/Date.md", "datamodels/search/DateOrDatetime.md", "datamodels/search/Datetime.md", "datamodels/search/Decimal.md", "datamodels/search/Double.md", "datamodels/search/Float.md", "datamodels/search/GraphFunction.md", "datamodels/search/Integer.md", "datamodels/search/Jsonpath.md", "datamodels/search/Jsonpointer.md", "datamodels/search/Ncname.md", "datamodels/search/Nodeidentifier.md", "datamodels/search/Objectidentifier.md", "datamodels/search/PathExpression.md", "datamodels/search/SearchBaseConfiguration.md", "datamodels/search/SearchProperty.md", "datamodels/search/SearchResult.md", "datamodels/search/SearchResultSet.md", "datamodels/search/SearchTerm.md", "datamodels/search/SearchTermSyntax.md", "datamodels/search/Sparqlpath.md", "datamodels/search/String.md", "datamodels/search/Time.md", "datamodels/search/Uri.md", "datamodels/search/Uriorcurie.md", "datamodels/search/all_of.md", "datamodels/search/any_of.md", "datamodels/search/atom.md", "datamodels/search/categories.md", "datamodels/search/configuration.md", "datamodels/search/cursor.md", "datamodels/search/force_case_insensitive.md", "datamodels/search/graph_predicates.md", "datamodels/search/include_aliases.md", "datamodels/search/include_definition.md", "datamodels/search/include_id.md", "datamodels/search/include_label.md", "datamodels/search/include_obsoletes_in_results.md", "datamodels/search/index.md", "datamodels/search/is_complete.md", "datamodels/search/is_fuzzy.md", "datamodels/search/is_partial.md", "datamodels/search/is_regular_expression.md", "datamodels/search/limit.md", "datamodels/search/matches_full_search_term.md", "datamodels/search/none_of.md", "datamodels/search/object_id.md", "datamodels/search/object_label.md", "datamodels/search/object_match_field.md", "datamodels/search/object_source.md", "datamodels/search/object_source_version.md", "datamodels/search/path_to.md", "datamodels/search/properties.md", "datamodels/search/rank.md", "datamodels/search/result_count.md", "datamodels/search/results.md", "datamodels/search/search-datamodel.md", "datamodels/search/search_term.md", "datamodels/search/search_terms.md", "datamodels/search/snippet.md", "datamodels/search/syntax.md", "datamodels/search/traversal.md", "datamodels/search/types.md", "datamodels/semsql/index.rst", "datamodels/similarity/BestMatch.md", "datamodels/similarity/Boolean.md", "datamodels/similarity/Curie.md", "datamodels/similarity/Date.md", "datamodels/similarity/DateOrDatetime.md", "datamodels/similarity/Datetime.md", "datamodels/similarity/Decimal.md", "datamodels/similarity/Double.md", "datamodels/similarity/Float.md", "datamodels/similarity/Integer.md", "datamodels/similarity/ItemCount.md", "datamodels/similarity/Jsonpath.md", "datamodels/similarity/Jsonpointer.md", "datamodels/similarity/Ncname.md", "datamodels/similarity/NegativeLogValue.md", "datamodels/similarity/Nodeidentifier.md", "datamodels/similarity/NonNegativeFloat.md", "datamodels/similarity/Objectidentifier.md", "datamodels/similarity/PairwiseSimilarity.md", "datamodels/similarity/Sparqlpath.md", "datamodels/similarity/String.md", "datamodels/similarity/TermInfo.md", "datamodels/similarity/TermPairwiseSimilarity.md", "datamodels/similarity/TermSetPairwiseSimilarity.md", "datamodels/similarity/Time.md", "datamodels/similarity/Uri.md", "datamodels/similarity/Uriorcurie.md", "datamodels/similarity/ZeroToOne.md", "datamodels/similarity/ancestor_id.md", "datamodels/similarity/ancestor_information_content.md", "datamodels/similarity/ancestor_label.md", "datamodels/similarity/ancestor_source.md", "datamodels/similarity/average_score.md", "datamodels/similarity/best_score.md", "datamodels/similarity/cosine_similarity.md", "datamodels/similarity/dice_similarity.md", "datamodels/similarity/id.md", "datamodels/similarity/index.md", "datamodels/similarity/information_content.md", "datamodels/similarity/intersection_count.md", "datamodels/similarity/jaccard_similarity.md", "datamodels/similarity/label.md", "datamodels/similarity/match_source.md", "datamodels/similarity/match_source_label.md", "datamodels/similarity/match_subsumer.md", "datamodels/similarity/match_subsumer_label.md", "datamodels/similarity/match_target.md", "datamodels/similarity/match_target_label.md", "datamodels/similarity/metric.md", "datamodels/similarity/object_best_matches.md", "datamodels/similarity/object_id.md", "datamodels/similarity/object_information_content.md", "datamodels/similarity/object_label.md", "datamodels/similarity/object_source.md", "datamodels/similarity/object_termset.md", "datamodels/similarity/overlap_coefficient.md", "datamodels/similarity/phenodigm_score.md", "datamodels/similarity/score.md", "datamodels/similarity/similarity.md", "datamodels/similarity/subject_best_matches.md", "datamodels/similarity/subject_id.md", "datamodels/similarity/subject_information_content.md", "datamodels/similarity/subject_label.md", "datamodels/similarity/subject_source.md", "datamodels/similarity/subject_termset.md", "datamodels/similarity/subsumed_by_score.md", "datamodels/similarity/subsumes_score.md", "datamodels/similarity/types.md", "datamodels/similarity/union_count.md", "datamodels/sssom/index.rst", "datamodels/summary-statistics/Agent.md", "datamodels/summary-statistics/Boolean.md", "datamodels/summary-statistics/ChangeTypeStatistic.md", "datamodels/summary-statistics/ContributorRole.md", "datamodels/summary-statistics/ContributorStatistics.md", "datamodels/summary-statistics/Curie.md", "datamodels/summary-statistics/Date.md", "datamodels/summary-statistics/DateOrDatetime.md", "datamodels/summary-statistics/Datetime.md", "datamodels/summary-statistics/Decimal.md", "datamodels/summary-statistics/Double.md", "datamodels/summary-statistics/FacetStatistics.md", "datamodels/summary-statistics/FacetedCount.md", "datamodels/summary-statistics/Float.md", "datamodels/summary-statistics/GlobalStatistics.md", "datamodels/summary-statistics/GroupedStatistics.md", "datamodels/summary-statistics/Integer.md", "datamodels/summary-statistics/Jsonpath.md", "datamodels/summary-statistics/Jsonpointer.md", "datamodels/summary-statistics/Ncname.md", "datamodels/summary-statistics/Nodeidentifier.md", "datamodels/summary-statistics/Objectidentifier.md", "datamodels/summary-statistics/Ontology.md", "datamodels/summary-statistics/Sparqlpath.md", "datamodels/summary-statistics/String.md", "datamodels/summary-statistics/SummaryStatisticCollection.md", "datamodels/summary-statistics/SummaryStatisticsCalculationActivity.md", "datamodels/summary-statistics/SummaryStatisticsReport.md", "datamodels/summary-statistics/Time.md", "datamodels/summary-statistics/UngroupedStatistics.md", "datamodels/summary-statistics/Uri.md", "datamodels/summary-statistics/Uriorcurie.md", "datamodels/summary-statistics/acted_on_behalf_of.md", "datamodels/summary-statistics/agents.md", "datamodels/summary-statistics/annotation_property_count.md", "datamodels/summary-statistics/anonymous_class_expression_count.md", "datamodels/summary-statistics/anonymous_individual_count.md", "datamodels/summary-statistics/by_category.md", "datamodels/summary-statistics/by_ontology.md", "datamodels/summary-statistics/by_subset.md", "datamodels/summary-statistics/by_taxon.md", "datamodels/summary-statistics/change_summary.md", "datamodels/summary-statistics/class_count.md", "datamodels/summary-statistics/class_count_by_category.md", "datamodels/summary-statistics/class_count_by_subset.md", "datamodels/summary-statistics/class_count_excluding_deprecated.md", "datamodels/summary-statistics/class_count_with_definitions.md", "datamodels/summary-statistics/class_count_with_text_definitions.md", "datamodels/summary-statistics/class_count_without_text_definitions.md", "datamodels/summary-statistics/class_statistic_group.md", "datamodels/summary-statistics/compared_with.md", "datamodels/summary-statistics/contributor_id.md", "datamodels/summary-statistics/contributor_name.md", "datamodels/summary-statistics/contributor_summary.md", "datamodels/summary-statistics/count_statistic.md", "datamodels/summary-statistics/datatype_property_count.md", "datamodels/summary-statistics/deprecated_class_count.md", "datamodels/summary-statistics/deprecated_object_property_count.md", "datamodels/summary-statistics/description.md", "datamodels/summary-statistics/description_logic_profile.md", "datamodels/summary-statistics/distinct_synonym_count.md", "datamodels/summary-statistics/edge_count_by_predicate.md", "datamodels/summary-statistics/ended_at_time.md", "datamodels/summary-statistics/entailed_edge_count_by_predicate.md", "datamodels/summary-statistics/equivalent_classes_axiom_count.md", "datamodels/summary-statistics/equivalentclasses_axiom_count.md", "datamodels/summary-statistics/facet.md", "datamodels/summary-statistics/filtered_count.md", "datamodels/summary-statistics/id.md", "datamodels/summary-statistics/index.md", "datamodels/summary-statistics/individual_count.md", "datamodels/summary-statistics/individual_statistic_group.md", "datamodels/summary-statistics/label.md", "datamodels/summary-statistics/mapping_count.md", "datamodels/summary-statistics/mapping_statement_count_by_object_source.md", "datamodels/summary-statistics/mapping_statement_count_by_predicate.md", "datamodels/summary-statistics/mapping_statement_count_subject_by_object_source.md", "datamodels/summary-statistics/merged_class_count.md", "datamodels/summary-statistics/metadata_statistic_group.md", "datamodels/summary-statistics/named_individual_count.md", "datamodels/summary-statistics/non_deprecated_class_count.md", "datamodels/summary-statistics/non_deprecated_object_property_count.md", "datamodels/summary-statistics/normalization_comments.md", "datamodels/summary-statistics/object_property_count.md", "datamodels/summary-statistics/ontologies.md", "datamodels/summary-statistics/ontology_count.md", "datamodels/summary-statistics/owl_axiom_count.md", "datamodels/summary-statistics/owl_statistic_group.md", "datamodels/summary-statistics/partitions.md", "datamodels/summary-statistics/prefix.md", "datamodels/summary-statistics/property_count.md", "datamodels/summary-statistics/property_statistic_group.md", "datamodels/summary-statistics/rdf_triple_count.md", "datamodels/summary-statistics/role_counts.md", "datamodels/summary-statistics/started_at_time.md", "datamodels/summary-statistics/subclass_of_axiom_count.md", "datamodels/summary-statistics/subset_count.md", "datamodels/summary-statistics/summary-statistics.md", "datamodels/summary-statistics/synonym_statement_count.md", "datamodels/summary-statistics/synonym_statement_count_by_predicate.md", "datamodels/summary-statistics/title.md", "datamodels/summary-statistics/types.md", "datamodels/summary-statistics/unsatisfiable_class_count.md", "datamodels/summary-statistics/untyped_entity_count.md", "datamodels/summary-statistics/version.md", "datamodels/summary-statistics/version_info.md", "datamodels/summary-statistics/was_associated_with.md", "datamodels/summary-statistics/was_generated_by.md", "datamodels/taxon-constraints/Boolean.md", "datamodels/taxon-constraints/ConfigurationOption.md", "datamodels/taxon-constraints/Curie.md", "datamodels/taxon-constraints/Date.md", "datamodels/taxon-constraints/DateOrDatetime.md", "datamodels/taxon-constraints/Datetime.md", "datamodels/taxon-constraints/Decimal.md", "datamodels/taxon-constraints/Double.md", "datamodels/taxon-constraints/Float.md", "datamodels/taxon-constraints/Integer.md", "datamodels/taxon-constraints/Jsonpath.md", "datamodels/taxon-constraints/Jsonpointer.md", "datamodels/taxon-constraints/Ncname.md", "datamodels/taxon-constraints/Nodeidentifier.md", "datamodels/taxon-constraints/Objectidentifier.md", "datamodels/taxon-constraints/PredicateTerm.md", "datamodels/taxon-constraints/Sparqlpath.md", "datamodels/taxon-constraints/String.md", "datamodels/taxon-constraints/SubjectTerm.md", "datamodels/taxon-constraints/Taxon.md", "datamodels/taxon-constraints/TaxonConstraint.md", "datamodels/taxon-constraints/Term.md", "datamodels/taxon-constraints/Time.md", "datamodels/taxon-constraints/Uri.md", "datamodels/taxon-constraints/Uriorcurie.md", "datamodels/taxon-constraints/asserted.md", "datamodels/taxon-constraints/candidate.md", "datamodels/taxon-constraints/comments.md", "datamodels/taxon-constraints/contradicted_by.md", "datamodels/taxon-constraints/description.md", "datamodels/taxon-constraints/evolutionary.md", "datamodels/taxon-constraints/id.md", "datamodels/taxon-constraints/index.md", "datamodels/taxon-constraints/label.md", "datamodels/taxon-constraints/never_in.md", "datamodels/taxon-constraints/only_in.md", "datamodels/taxon-constraints/predicate.md", "datamodels/taxon-constraints/predicates.md", "datamodels/taxon-constraints/present_in.md", "datamodels/taxon-constraints/present_in_ancestor_of.md", "datamodels/taxon-constraints/redundant.md", "datamodels/taxon-constraints/redundant_with.md", "datamodels/taxon-constraints/redundant_with_only_in.md", "datamodels/taxon-constraints/sources.md", "datamodels/taxon-constraints/subject.md", "datamodels/taxon-constraints/taxon.md", "datamodels/taxon-constraints/taxon-constraints.md", "datamodels/taxon-constraints/unsatisfiable.md", "datamodels/taxon-constraints/via_terms.md", "datamodels/text-annotator/Boolean.md", "datamodels/text-annotator/Curie.md", "datamodels/text-annotator/Date.md", "datamodels/text-annotator/DateOrDatetime.md", "datamodels/text-annotator/Datetime.md", "datamodels/text-annotator/Decimal.md", "datamodels/text-annotator/Double.md", "datamodels/text-annotator/Float.md", "datamodels/text-annotator/HasSpan.md", "datamodels/text-annotator/Integer.md", "datamodels/text-annotator/Jsonpath.md", "datamodels/text-annotator/Jsonpointer.md", "datamodels/text-annotator/Ncname.md", "datamodels/text-annotator/Nodeidentifier.md", "datamodels/text-annotator/Objectidentifier.md", "datamodels/text-annotator/Position.md", "datamodels/text-annotator/Sparqlpath.md", "datamodels/text-annotator/String.md", "datamodels/text-annotator/TextAnnotation.md", "datamodels/text-annotator/TextAnnotationConfiguration.md", "datamodels/text-annotator/TextAnnotationResultSet.md", "datamodels/text-annotator/TextualElement.md", "datamodels/text-annotator/Time.md", "datamodels/text-annotator/TransformationType.md", "datamodels/text-annotator/Uri.md", "datamodels/text-annotator/Uriorcurie.md", "datamodels/text-annotator/annotations.md", "datamodels/text-annotator/categories.md", "datamodels/text-annotator/confidence.md", "datamodels/text-annotator/id.md", "datamodels/text-annotator/include_aliases.md", "datamodels/text-annotator/index.md", "datamodels/text-annotator/info.md", "datamodels/text-annotator/is_longest_match.md", "datamodels/text-annotator/limit.md", "datamodels/text-annotator/match_string.md", "datamodels/text-annotator/match_type.md", "datamodels/text-annotator/matches_whole_text.md", "datamodels/text-annotator/model.md", "datamodels/text-annotator/object_aliases.md", "datamodels/text-annotator/object_categories.md", "datamodels/text-annotator/object_id.md", "datamodels/text-annotator/object_label.md", "datamodels/text-annotator/object_source.md", "datamodels/text-annotator/parent_document.md", "datamodels/text-annotator/predicate_id.md", "datamodels/text-annotator/source_text.md", "datamodels/text-annotator/sources.md", "datamodels/text-annotator/subject_end.md", "datamodels/text-annotator/subject_label.md", "datamodels/text-annotator/subject_source.md", "datamodels/text-annotator/subject_start.md", "datamodels/text-annotator/subject_text_id.md", "datamodels/text-annotator/text.md", "datamodels/text-annotator/text-annotator.md", "datamodels/text-annotator/token_exclusion_list.md", "datamodels/text-annotator/types.md", "datamodels/validation/Boolean.md", "datamodels/validation/ConstraintComponent.md", "datamodels/validation/Curie.md", "datamodels/validation/Date.md", "datamodels/validation/DateOrDatetime.md", "datamodels/validation/Datetime.md", "datamodels/validation/Decimal.md", "datamodels/validation/Double.md", "datamodels/validation/ExternalReferenceValidationResult.md", "datamodels/validation/Float.md", "datamodels/validation/Integer.md", "datamodels/validation/Jsonpath.md", "datamodels/validation/Jsonpointer.md", "datamodels/validation/MappingValidationResult.md", "datamodels/validation/NamedResource.md", "datamodels/validation/Ncname.md", "datamodels/validation/Node.md", "datamodels/validation/Nodeidentifier.md", "datamodels/validation/Objectidentifier.md", "datamodels/validation/RepairConfiguration.md", "datamodels/validation/RepairOperation.md", "datamodels/validation/RepairReport.md", "datamodels/validation/Report.md", "datamodels/validation/Result.md", "datamodels/validation/SeverityOptions.md", "datamodels/validation/Sparqlpath.md", "datamodels/validation/String.md", "datamodels/validation/Time.md", "datamodels/validation/TypeSeverityKeyValue.md", "datamodels/validation/Uri.md", "datamodels/validation/Uriorcurie.md", "datamodels/validation/ValidationConfiguration.md", "datamodels/validation/ValidationReport.md", "datamodels/validation/ValidationResult.md", "datamodels/validation/ValidationResultType.md", "datamodels/validation/category.md", "datamodels/validation/confidence.md", "datamodels/validation/dry_run.md", "datamodels/validation/http_response_code.md", "datamodels/validation/id.md", "datamodels/validation/index.md", "datamodels/validation/info.md", "datamodels/validation/instantiates.md", "datamodels/validation/max_number_results_per_type.md", "datamodels/validation/modified.md", "datamodels/validation/number_of_attempts.md", "datamodels/validation/object.md", "datamodels/validation/object_id.md", "datamodels/validation/object_info.md", "datamodels/validation/object_str.md", "datamodels/validation/predicate.md", "datamodels/validation/predicate_id.md", "datamodels/validation/problem.md", "datamodels/validation/prompt_info.md", "datamodels/validation/repairs.md", "datamodels/validation/results.md", "datamodels/validation/schema_path.md", "datamodels/validation/severity.md", "datamodels/validation/source.md", "datamodels/validation/subject.md", "datamodels/validation/subject_id.md", "datamodels/validation/subject_info.md", "datamodels/validation/successful.md", "datamodels/validation/suggested_modifications.md", "datamodels/validation/suggested_predicate.md", "datamodels/validation/time_checked.md", "datamodels/validation/type.md", "datamodels/validation/type_severity_map.md", "datamodels/validation/types.md", "datamodels/validation/url.md", "datamodels/validation/validation_configuration.md", "datamodels/validation/validaton-results.md", "faq/architecture.rst", "faq/commandline.rst", "faq/contributing.rst", "faq/general.rst", "faq/index.rst", "faq/ontologies.rst", "faq/troubleshooting.rst", "glossary.rst", "guide/aliases.rst", "guide/associations.rst", "guide/basics.rst", "guide/curies-and-uris.rst", "guide/index.rst", "guide/learning-more.rst", "guide/logical-definitions.rst", "guide/mappings.rst", "guide/obsoletion.rst", "guide/primary-labels.rst", "guide/relationships-and-graphs.rst", "guide/similarity.rst", "howtos/fhir-conversions.rst", "howtos/index.rst", "howtos/perform-lexical-matching.rst", "howtos/roll-up-annotations-to-a-subset.rst", "howtos/use-llms.rst", "howtos/validate-an-obo-ontology.md", "howtos/visualize-ontology-subgraphs.rst", "howtos/write-a-plugin.rst", "index.rst", "intro/index.rst", "intro/tutorial01.rst", "intro/tutorial02.rst", "intro/tutorial03.rst", "intro/tutorial04.rst", "intro/tutorial05.rst", "intro/tutorial06.rst", "intro/tutorial07.rst", "intro/tutorial08.rst", "introduction.rst", "logos/README.md", "notebooks.rst", "packages/architecture.rst", "packages/best-practice.rst", "packages/converters/data-model-converter.rst", "packages/converters/index.rst", "packages/converters/obo-graph-to-cx.rst", "packages/converters/obo-graph-to-fhir.rst", "packages/converters/obo-graph-to-obo-format.rst", "packages/converters/obo-graph-to-owl.rst", "packages/implementations/aggregator.rst", "packages/implementations/bioportal.rst", "packages/implementations/funowl.rst", "packages/implementations/gilda.rst", "packages/implementations/index.rst", "packages/implementations/llm.rst", "packages/implementations/obograph.rst", "packages/implementations/ols.rst", "packages/implementations/ontobee.rst", "packages/implementations/owlery.rst", "packages/implementations/pantherdb.rst", "packages/implementations/pronto.rst", "packages/implementations/robot-template.rst", "packages/implementations/simple_obo.rst", "packages/implementations/sparql.rst", "packages/implementations/sqldb.rst", "packages/implementations/ubergraph.rst", "packages/index.rst", "packages/interfaces/association-provider.rst", "packages/interfaces/basic.rst", "packages/interfaces/class-enrichment.rst", "packages/interfaces/differ.rst", "packages/interfaces/dumper.rst", "packages/interfaces/index.rst", "packages/interfaces/mapping-provider.rst", "packages/interfaces/obograph.rst", "packages/interfaces/owl.rst", "packages/interfaces/patcher.rst", "packages/interfaces/relation-graph.rst", "packages/interfaces/search.rst", "packages/interfaces/semantic-similarity.rst", "packages/interfaces/subsetting.rst", "packages/interfaces/summary-statistics.rst", "packages/interfaces/text-annotator.rst", "packages/interfaces/validator.rst", "packages/selectors.rst", "packages/src/oaklib.utilities.apikey_manager.rst", "packages/src/oaklib.utilities.graph.networkx_bridge.rst", "packages/src/oaklib.utilities.graph.relationship_walker.rst", "packages/src/oaklib.utilities.lexical.lexical_indexer.rst", "packages/src/oaklib.utilities.obograph_utils.rst", "packages/src/oaklib.utilities.subsets.slimmer_utils.rst", "packages/src/oaklib.utilities.table_filler.rst", "packages/src/oaklib.utilities.taxon.rst", "packages/utilities.rst", "rdf-owl-layering.rst", "search-syntax.rst"], "titles": ["Command Line", "Ontology Concepts", "Contribution Guidelines", "Class: Association", "Class: AssociationChange", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Class: NegatedAssociation", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: PairwiseCoAssociation", "Class: ParserConfiguration", "Class: PositiveOrNegativeAssociation", "Class: PropertyValue", "Class: RollupGroup", "Type: Sparqlpath", "Type: String", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: aggregator_knowledge_source", "association", "Slot: associations", "Slot: associations_for_subjects_in_common", "Slot: closure_delta", "Slot: closure_information_content_delta", "Slot: closure_predicates", "Slot: comments", "Slot: core_triple", "Slot: creation_date", "Slot: date", "Slot: denormalized_slot", "Slot: diff_slot", "Slot: evidence_type", "Slot: group_object", "Slot: include_association_attributes", "OAK Association Data Model", "Slot: is_creation", "Slot: is_deletion", "Slot: is_generalization", "Slot: is_migration", "Slot: is_specialization", "Slot: modification_date", "Slot: negated", "Slot: new_date", "Slot: new_object", "Slot: new_predicate", "Slot: number_subject_unique_to_entity1", "Slot: number_subject_unique_to_entity2", "Slot: number_subjects_in_common", "Slot: number_subjects_in_union", "Slot: object", "Slot: object1", "Slot: object1_label", "Slot: object2", "Slot: object2_label", "Slot: object_closure", "Slot: object_closure_label", "Slot: object_label", "Slot: old_date", "Slot: old_object", "Slot: old_object_obsolete", "Slot: old_predicate", "Slot: original_object", "Slot: original_predicate", "Slot: original_subject", "Slot: predicate", "Slot: predicate_label", "Slot: preserve_negated_associations", "Slot: primary_knowledge_source", "Slot: property_values", "Slot: proportion_subjects_in_common", "Slot: publication_is_added", "Slot: publication_is_deleted", "Slot: publications", "Slot: sub_groups", "Slot: subject", "Slot: subject_closure", "Slot: subject_closure_label", "Slot: subject_label", "Slot: subjects_in_common", "Slot: summary_group", "Slot: supporting_objects", "Type: Boolean", "Class: ClassEnrichmentConfiguration", "Class: ClassEnrichmentResult", "Class: ClassEnrichmentResultSet", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Type: Position", "Enum: SortFieldEnum", "Type: Sparqlpath", "Type: String", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: ancestor_of_more_informative_result", "Slot: background_count", "Slot: background_total", "class-enrichment", "Slot: class_id", "Slot: class_label", "Slot: descendant_of_more_informative_result", "Slot: direction", "Slot: false_discovery_rate", "Slot: fold_enrichment", "Class Enrichment Datamodel", "Slot: p_value", "Slot: p_value_adjusted", "Slot: p_value_cutoff", "Slot: probability", "Slot: rank", "Slot: results", "Slot: sample_count", "Slot: sample_total", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Enum: DiffCategory", "Type: Double", "Type: EntityReference", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Label", "Enum: MappingCardinalityEnum", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Position", "Class: RelationalDiff", "Type: Source", "Type: Sparqlpath", "Type: String", "Class: StructureDiffResultSet", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: category", "cross-ontology-diff", "Cross-Ontology Diff", "Slot: is_functional", "Slot: label", "Slot: left_object_id", "Slot: left_object_is_functional", "Slot: left_object_label", "Slot: left_object_name", "Slot: left_predicate_id", "Slot: left_predicate_label", "Slot: left_predicate_name", "Slot: left_side", "Slot: left_source", "Slot: left_subject_id", "Slot: left_subject_is_functional", "Slot: left_subject_label", "Slot: left_subject_name", "Slot: object", "Slot: object_mapping_cardinality", "Slot: object_mapping_predicate", "Slot: predicate", "Slot: results", "Slot: right_intermediate_ids", "Slot: right_object_id", "Slot: right_object_label", "Slot: right_object_name", "Slot: right_predicate_ids", "Slot: right_predicate_labels", "Slot: right_predicate_names", "Slot: right_side", "Slot: right_source", "Slot: right_subject_id", "Slot: right_subject_label", "Slot: right_subject_name", "Slot: side", "Slot: subject", "Slot: subject_mapping_cardinality", "Slot: subject_mapping_predicate", "types", "FunOwl", "Datamodels", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Class: ItemList", "Class: ItemListCollection", "Enum: ItemListOrderType", "Type: Jsonpath", "Type: Jsonpointer", "Class: ListItem", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Type: Sparqlpath", "Type: String", "Class: Thing", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: additionalType", "Slot: categories", "Slot: description", "Slot: elementId", "Slot: id", "Slot: idType", "Slot: identifiers", "Item List Data Model", "Slot: item", "itemList", "Slot: itemListElements", "Slot: itemLists", "Slot: itemMetadataMap", "Slot: keywords", "Slot: name", "Slot: numberOfItems", "Slot: position", "Slot: previousItem", "Slot: type", "Slot: url", "Slot: wasGeneratedBy", "KGCL", "Class: Activity", "Class: Any", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Class: LexicalGrouping", "Class: LexicalIndex", "Class: LexicalTransformation", "Class: LexicalTransformationPipeline", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: RelationshipToTerm", "Type: Sparqlpath", "Type: String", "Type: Time", "Enum: TransformationType", "Type: Uri", "Type: Uriorcurie", "Slot: element", "Slot: element_term", "Slot: groupings", "Lexical Index", "lexical-index", "lexican-index", "Slot: name", "Slot: params", "Slot: pipeline", "Slot: pipelines", "Slot: predicate", "Slot: relationships", "Slot: source", "Slot: synonymized", "Slot: term", "Slot: transformations", "Slot: type", "types", "Class: Activity", "Class: Any", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Class: LexicalGrouping", "Class: LexicalIndex", "Class: LexicalTransformation", "Class: LexicalTransformationPipeline", "Class: MappingRule", "Class: MappingRuleCollection", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: Postcondition", "Class: Precondition", "Class: RelationshipToTerm", "Type: Sparqlpath", "Type: String", "Class: Synonymizer", "Class: Test", "Type: Time", "Enum: TransformationType", "Type: Uri", "Type: Uriorcurie", "Slot: description", "Slot: element", "Slot: element_term", "Slot: groupings", "Mapping Rules Datamodel", "Slot: input", "lexical-index", "lexican-index", "mapping-rules", "mapping-rules-datamodel", "Slot: mapping_source_one_of", "Slot: match", "Slot: match_scope", "Slot: minimum_confidence", "Slot: name", "Slot: object_match_field_one_of", "Slot: object_source_one_of", "Slot: oneway", "Slot: output", "Slot: params", "Slot: pipeline", "Slot: pipelines", "Slot: postconditions", "Slot: preconditions", "Slot: predicate", "Slot: predicate_id", "Slot: predicate_id_one_of", "Slot: prefix", "Slot: qualifier", "Slot: relationships", "Slot: replacement", "Slot: rules", "Slot: source", "Slot: subject_match_field_one_of", "Slot: subject_source_one_of", "Slot: synonymized", "Slot: synonymizer", "Slot: term", "Slot: tests", "Slot: the_rule", "Slot: transformations", "Slot: transformations_included_in", "Slot: type", "types", "Slot: weight", "Class: Axiom", "Class: BasicPropertyValue", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Class: DefinitionPropertyValue", "Class: DisjointClassExpressionsAxiom", "Class: DomainRangeAxiom", "Type: Double", "Class: Edge", "Class: EquivalentNodesSet", "Class: ExistentialRestrictionExpression", "Type: Float", "Class: Graph", "Class: GraphDocument", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Class: LogicalDefinitionAxiom", "Class: Meta", "Type: Ncname", "Class: Node", "Enum: NodeTypeEnum", "Type: Nodeidentifier", "Type: Objectidentifier", "Type: OboIdentifierString", "PredsEnum", "Class: PrefixDeclaration", "Class: PropertyChainAxiom", "Enum: PropertyTypeEnum", "Class: PropertyValue", "Enum: ScopeEnum", "ScopesEnum", "Type: Sparqlpath", "Type: String", "Class: SubsetDefinition", "Class: SynonymPropertyValue", "Class: SynonymTypeDefinition", "Type: SynonymTypeIdentifierString", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Class: XrefPropertyValue", "Type: XrefString", "Slot: allValuesFromEdges", "Slot: basicPropertyValues", "Slot: chainPredicateIds", "Slot: classExpressions", "Slot: classIds", "Slot: comments", "Slot: definedClassId", "Slot: definition", "Slot: deprecated", "Slot: disjointClassExpressionsAxioms", "Slot: domainClassIds", "Slot: domainRangeAxioms", "Slot: edges", "Slot: equivalentNodesSets", "Slot: fillerId", "Slot: genusIds", "Slot: graphs", "Slot: id", "Obographs Datamodel", "Slot: isExact", "Slot: label", "Slot: lang", "Slot: lbl", "Slot: logicalDefinitionAxioms", "Slot: meta", "Slot: namespace", "Slot: nodeIds", "Slot: nodes", "Slot: obj", "obographs_datamodel", "obographs_linkml_model", "Slot: pred", "Slot: predicateId", "Slot: prefix", "Slot: prefixes", "Slot: propertyChainAxioms", "Slot: propertyId", "Slot: propertyType", "Slot: rangeClassIds", "Slot: representativeNodeId", "Slot: representitiveNodeId", "Slot: restrictions", "Slot: scope", "Slot: sub", "Slot: subsetDefinitions", "Slot: subsets", "Slot: synonymType", "Slot: synonymTypeDefinitions", "Slot: synonyms", "Slot: type", "types", "Slot: unionEquivalentTo", "Slot: unionEquivalentToExpression", "Slot: val", "Slot: valType", "Slot: version", "Slot: xrefs", "Class: Agent", "Subset: AllotropePermittedProfile", "Subset: AllotropeRequiredProfile", "Class: Annotation", "Class: AnnotationProperty", "Class: AnnotationPropertyMixin", "Class: Anonymous", "Class: AnonymousClassExpression", "Class: Any", "Class: Axiom", "Type: Boolean", "Type: CURIELiteral", "Class: Class", "Class: ClassExpression", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Enum: DefinitionConstraintComponent", "Type: Double", "Class: Expression", "Type: Float", "Subset: GoPermittedProfile", "Subset: GoRecommendedProfile", "Subset: GoRequiredProfile", "Class: HasCategory", "Class: HasLifeCycle", "Class: HasMappings", "Class: HasMinimalMetadata", "Class: HasProvenance", "Class: HasSynonyms", "Class: HasUserInformation", "Class: HomoSapiens", "Slot: IEDB_alternative_term", "Slot: ISA_alternative_term", "Class: Image", "Type: Integer", "Type: IriType", "Type: Jsonpath", "Type: Jsonpointer", "Type: LabelType", "Slot: NCIT_definition_source", "Slot: NCIT_term_source", "Slot: NCIT_term_type", "Class: NamedIndividual", "Class: NamedObject", "Type: NarrativeText", "Type: Ncname", "Type: Nodeidentifier", "Class: NotObsoleteAspect", "Slot: OBO_foundry_unique_label", "Subset: ObiPermittedProfile", "Subset: ObiRequiredProfile", "Class: ObjectProperty", "Type: Objectidentifier", "Class: ObsoleteAspect", "Class: Ontology", "Ontology-Metadata", "Class: Property", "Class: PropertyExpression", "Class: Restriction", "Type: Sparqlpath", "Type: String", "Class: Subset", "Class: Term", "Class: Thing", "Type: TidyString", "Type: Time", "Class: TransitiveProperty", "Type: URLLiteral", "Type: Uri", "Type: Uriorcurie", "Slot: allValuesFrom", "Slot: alternative_term", "Slot: annotatedProperty", "Slot: annotatedSource", "Slot: annotatedTarget", "Slot: annotations", "Slot: broadMatch", "Slot: cardinality", "Slot: category", "Slot: changeNote", "Slot: closeMatch", "Slot: comment", "Slot: complementOf", "Slot: conformsTo", "Slot: consider", "Slot: contributor", "Slot: core_property", "Slot: created", "Slot: created_by", "Slot: creation_date", "Slot: creator", "Slot: curator_note", "Slot: database_cross_reference", "Slot: date", "Slot: date_retrieved", "Slot: defaultLanguage", "Slot: definition", "Slot: definition_source", "Slot: depicted_by", "Slot: deprecated", "Slot: disconnected_from", "Slot: disjointWith", "Slot: distinctMembers", "Slot: domain", "Slot: editor_note", "Slot: editor_preferred_term", "Slot: equivalentClass", "Slot: equivalentProperty", "Slot: evidence", "Slot: exactMatch", "Slot: example_of_usage", "Slot: excluded_axiom", "Slot: excluded_from_QC_check", "Slot: excluded_subClassOf", "Slot: excluded_synonym", "Slot: external_ontology", "Slot: hasValue", "Slot: has_alternative_id", "Slot: has_axiom_label", "Slot: has_broad_synonym", "Slot: has_curation_status", "Slot: has_exact_synonym", "Slot: has_narrow_synonym", "Slot: has_obo_namespace", "Slot: has_obsolescence_reason", "Slot: has_ontology_root_term", "Slot: has_rank", "Slot: has_related_synonym", "Slot: has_synonym_type", "Slot: id", "Slot: image", "Slot: imported_from", "Slot: imports", "Slot: in_subset", "Ontology Metadata Ontology Schema", "Slot: informative_property", "Slot: intersectionOf", "Slot: inverseOf", "Slot: isDefinedBy", "Slot: is_a_defining_property_chain_axiom", "Slot: is_a_defining_property_chain_axiom_where_second_argument_is_reflexive", "Slot: is_class_level", "Slot: is_cyclic", "Slot: is_inferred", "Slot: is_metadata_tag", "Slot: is_transitive", "Slot: label", "Slot: language", "Slot: license", "Slot: logical_predicate", "Slot: match", "Slot: match_aspect", "Slot: maxQualifiedCardinality", "Slot: members", "Slot: minCardinality", "Slot: minQualifiedCardinality", "Slot: narrowMatch", "Slot: never_in_taxon", "Slot: notes", "Slot: object", "Slot: oboInOwl_id", "Slot: oboInOwl_ontology", "Slot: obsoletion_related_property", "omo-schema", "Slot: onClass", "Slot: onProperty", "Slot: oneOf", "Slot: ontology_term_requester", "Slot: page", "Slot: predicate", "Slot: propertyChainAxiom", "Slot: provenance_property", "Slot: qualifiedCardinality", "Slot: range", "Slot: reification_predicate", "Slot: sameAs", "Slot: seeAlso", "Slot: shortcut_annotation_property", "Slot: shorthand", "Slot: should_conform_to", "Slot: someValuesFrom", "Slot: source", "Slot: subClassOf", "Slot: synonym", "Slot: temporal_interpretation", "Slot: term_editor", "Slot: term_replaced_by", "Slot: term_tracker_item", "Slot: title", "Slot: type", "types", "Slot: unionOf", "Slot: url", "Slot: versionIRI", "Slot: versionInfo", "Slot: version_property", "Type: Boolean", "Enum: BooleanOperator", "Class: ComplexQuery", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Enum: GraphFunction", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: PathExpression", "Class: SearchBaseConfiguration", "Enum: SearchProperty", "Class: SearchResult", "Class: SearchResultSet", "Type: SearchTerm", "Enum: SearchTermSyntax", "Type: Sparqlpath", "Type: String", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: all_of", "Slot: any_of", "Slot: atom", "Slot: categories", "Slot: configuration", "Slot: cursor", "Slot: force_case_insensitive", "Slot: graph_predicates", "Slot: include_aliases", "Slot: include_definition", "Slot: include_id", "Slot: include_label", "Slot: include_obsoletes_in_results", "search datamodel", "Slot: is_complete", "Slot: is_fuzzy", "Slot: is_partial", "Slot: is_regular_expression", "Slot: limit", "Slot: matches_full_search_term", "Slot: none_of", "Slot: object_id", "Slot: object_label", "Slot: object_match_field", "Slot: object_source", "Slot: object_source_version", "Slot: path_to", "Slot: properties", "Slot: rank", "Slot: result_count", "Slot: results", "search-datamodel", "Slot: search_term", "Slot: search_terms", "Slot: snippet", "Slot: syntax", "Slot: traversal", "types", "SemSQL", "Class: BestMatch", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: ItemCount", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: NegativeLogValue", "Type: Nodeidentifier", "Type: NonNegativeFloat", "Type: Objectidentifier", "Class: PairwiseSimilarity", "Type: Sparqlpath", "Type: String", "Class: TermInfo", "Class: TermPairwiseSimilarity", "Class: TermSetPairwiseSimilarity", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Type: ZeroToOne", "Slot: ancestor_id", "Slot: ancestor_information_content", "Slot: ancestor_label", "Slot: ancestor_source", "Slot: average_score", "Slot: best_score", "Slot: cosine_similarity", "Slot: dice_similarity", "Slot: id", "Semantic Similarity", "Slot: information_content", "Slot: intersection_count", "Slot: jaccard_similarity", "Slot: label", "Slot: match_source", "Slot: match_source_label", "Slot: match_subsumer", "Slot: match_subsumer_label", "Slot: match_target", "Slot: match_target_label", "Slot: metric", "Slot: object_best_matches", "Slot: object_id", "Slot: object_information_content", "Slot: object_label", "Slot: object_source", "Slot: object_termset", "Slot: overlap_coefficient", "Slot: phenodigm_score", "Slot: score", "Slot: similarity", "Slot: subject_best_matches", "Slot: subject_id", "Slot: subject_information_content", "Slot: subject_label", "Slot: subject_source", "Slot: subject_termset", "Slot: subsumed_by_score", "Slot: subsumes_score", "types", "Slot: union_count", "SSSOM", "Class: Agent", "Type: Boolean", "Class: ChangeTypeStatistic", "Class: ContributorRole", "Class: ContributorStatistics", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Class: FacetStatistics", "Class: FacetedCount", "Type: Float", "Class: GlobalStatistics", "Class: GroupedStatistics", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: Ontology", "Type: Sparqlpath", "Type: String", "Class: SummaryStatisticCollection", "Class: SummaryStatisticsCalculationActivity", "Class: SummaryStatisticsReport", "Type: Time", "Class: UngroupedStatistics", "Type: Uri", "Type: Uriorcurie", "Slot: acted_on_behalf_of", "Slot: agents", "Slot: annotation_property_count", "Slot: anonymous_class_expression_count", "Slot: anonymous_individual_count", "Slot: by_category", "Slot: by_ontology", "Slot: by_subset", "Slot: by_taxon", "Slot: change_summary", "Slot: class_count", "Slot: class_count_by_category", "Slot: class_count_by_subset", "Slot: class_count_excluding_deprecated", "Slot: class_count_with_definitions", "Slot: class_count_with_text_definitions", "Slot: class_count_without_text_definitions", "Slot: class_statistic_group", "Slot: compared_with", "Slot: contributor_id", "Slot: contributor_name", "Slot: contributor_summary", "Slot: count_statistic", "Slot: datatype_property_count", "Slot: deprecated_class_count", "Slot: deprecated_object_property_count", "Slot: description", "Slot: description_logic_profile", "Slot: distinct_synonym_count", "Slot: edge_count_by_predicate", "Slot: ended_at_time", "Slot: entailed_edge_count_by_predicate", "Slot: equivalent_classes_axiom_count", "Slot: equivalentclasses_axiom_count", "Slot: facet", "Slot: filtered_count", "Slot: id", "Summary Statistics Datamodel", "Slot: individual_count", "Slot: individual_statistic_group", "Slot: label", "Slot: mapping_count", "Slot: mapping_statement_count_by_object_source", "Slot: mapping_statement_count_by_predicate", "Slot: mapping_statement_count_subject_by_object_source", "Slot: merged_class_count", "Slot: metadata_statistic_group", "Slot: named_individual_count", "Slot: non_deprecated_class_count", "Slot: non_deprecated_object_property_count", "Slot: normalization_comments", "Slot: object_property_count", "Slot: ontologies", "Slot: ontology_count", "Slot: owl_axiom_count", "Slot: owl_statistic_group", "Slot: partitions", "Slot: prefix", "Slot: property_count", "Slot: property_statistic_group", "Slot: rdf_triple_count", "Slot: role_counts", "Slot: started_at_time", "Slot: subclass_of_axiom_count", "Slot: subset_count", "summary-statistics", "Slot: synonym_statement_count", "Slot: synonym_statement_count_by_predicate", "Slot: title", "types", "Slot: unsatisfiable_class_count", "Slot: untyped_entity_count", "Slot: version", "Slot: version_info", "Slot: was_associated_with", "Slot: was_generated_by", "Type: Boolean", "Enum: ConfigurationOption", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: PredicateTerm", "Type: Sparqlpath", "Type: String", "Class: SubjectTerm", "Class: Taxon", "Class: TaxonConstraint", "Class: Term", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: asserted", "Slot: candidate", "Slot: comments", "Slot: contradicted_by", "Slot: description", "Slot: evolutionary", "Slot: id", "Taxon Constraints Reporting Datamodel", "Slot: label", "Slot: never_in", "Slot: only_in", "Slot: predicate", "Slot: predicates", "Slot: present_in", "Slot: present_in_ancestor_of", "Slot: redundant", "Slot: redundant_with", "Slot: redundant_with_only_in", "Slot: sources", "Slot: subject", "Slot: taxon", "taxon-constraints", "Slot: unsatisfiable", "Slot: via_terms", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Class: HasSpan", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Type: Position", "Type: Sparqlpath", "Type: String", "Class: TextAnnotation", "Class: TextAnnotationConfiguration", "Class: TextAnnotationResultSet", "Class: TextualElement", "Type: Time", "Enum: TransformationType", "Type: Uri", "Type: Uriorcurie", "Slot: annotations", "Slot: categories", "Slot: confidence", "Slot: id", "Slot: include_aliases", "Text Annotator Datamodel", "Slot: info", "Slot: is_longest_match", "Slot: limit", "Slot: match_string", "Slot: match_type", "Slot: matches_whole_text", "Slot: model", "Slot: object_aliases", "Slot: object_categories", "Slot: object_id", "Slot: object_label", "Slot: object_source", "Slot: parent_document", "Slot: predicate_id", "Slot: source_text", "Slot: sources", "Slot: subject_end", "Slot: subject_label", "Slot: subject_source", "Slot: subject_start", "Slot: subject_text_id", "Slot: text", "text-annotator", "Slot: token_exclusion_list", "types", "Type: Boolean", "Class: ConstraintComponent", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Class: ExternalReferenceValidationResult", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Class: MappingValidationResult", "Class: NamedResource", "Type: Ncname", "Class: Node", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: RepairConfiguration", "Class: RepairOperation", "Class: RepairReport", "Class: Report", "Class: Result", "Enum: SeverityOptions", "Type: Sparqlpath", "Type: String", "Type: Time", "Class: TypeSeverityKeyValue", "Type: Uri", "Type: Uriorcurie", "Class: ValidationConfiguration", "Class: ValidationReport", "Class: ValidationResult", "Enum: ValidationResultType", "Slot: category", "Slot: confidence", "Slot: dry_run", "Slot: http_response_code", "Slot: id", "Validation Results Datamodel", "Slot: info", "Slot: instantiates", "Slot: max_number_results_per_type", "Slot: modified", "Slot: number_of_attempts", "Slot: object", "Slot: object_id", "Slot: object_info", "Slot: object_str", "Slot: predicate", "Slot: predicate_id", "Slot: problem", "Slot: prompt_info", "Slot: repairs", "Slot: results", "Slot: schema_path", "Slot: severity", "Slot: source", "Slot: subject", "Slot: subject_id", "Slot: subject_info", "Slot: successful", "Slot: suggested_modifications", "Slot: suggested_predicate", "Slot: time_checked", "Slot: type", "Slot: type_severity_map", "types", "Slot: url", "Slot: validation_configuration", "validaton-results", "FAQ: Architecture and Design", "FAQ: Command Line", "FAQ: Contributing", "FAQ: General", "FAQ", "FAQ: Ontologies", "FAQ: Troubleshooting", "Glossary", "Aliases and Synonyms", "Associations and Curated Annotations", "OAK Basics", "Identifying entities: CURIEs and URIs", "The OAK Guide", "Learning More", "Logical Definitions", "Mappings and Cross-References", "Obsoletion", "Primary Labels", "Relationships and Graphs", "Computing Similarity between Entities", "FHIR Conversions", "How-To Guides", "<no title>", "<no title>", "How to use Large Language Models (LLMs) with OAK", "How to Validate an OBO ontology using Obo Metadata Ontology schema", "<no title>", "How to write a plugin", "Ontology Access Kit (OAK) Documentation", "Tutorial", "Part 1: Getting Started", "Part 2: Basic Python", "Part 3: Triplestore Backends", "Part 4: OboGraphs", "Part 5: Graph Visualization", "Part 6: Working With OWL", "Part 7: SQLite files", "Part 8: Applying Changes to Ontologies", "Introduction", "<no title>", "Jupyter Notebooks", "Architecture", "Best Practice", "Abstract Class", "Converters", "OBO Graph to CX Converter", "OBO Graph to FHIR Converter", "OBO Graph to OBO Format Converter", "OBO Graph to OWL Converter", "Aggregator Adapter", "Bioportal Adapter", "FunOwl Adapter", "Gilda Adapter", "Implementations", "LLM Adapter", "OBO Graph Adapter", "Ontology Lookup Service (OLS) Adapter", "Ontobee Adapter", "Owlery Adapter", "PantherDB Adapter", "Pronto / OBO Files Adapter", "ROBOT Template Adapter", "Simple OBO Adapter", "Sparql Adapter", "SQL Database Adapter", "Ubergraph Adapter", "OAK Library Documentation", "Association Provider Interface", "Basic Ontology Interface", "Class Enrichment Calculation Interface", "Differ Interface", "Dumper Interface", "Interfaces", "Mapping Provider Interface", "OboGraph Interface", "OWL Interface", "Patcher Interface", "Relation Graph", "Search Interface", "Semantic Similarity Interface", "Subsetting", "Summary Statistics", "Text Annotator Interface", "Validator Interface", "Ontology Adapter Selectors", "oaklib.utilities.apikey_manager", "oaklib.utilities.graph.networkx_bridge", "oaklib.utilities.graph.relationship_walker", "oaklib.utilities.lexical.lexical_indexer", "oaklib.utilities.obograph_utils", "oaklib.utilities.subsets.slimmer_utils", "oaklib.utilities.table_filler", "oaklib.utilities.taxon", "Utilities", "Layering on RDF/OWL", "Search Syntax"], "terms": {"we": [0, 1, 2, 250, 744, 814, 941, 958, 1102, 1103, 1104, 1105, 1107, 1108, 1109, 1110, 1111, 1112, 1115, 1118, 1119, 1120, 1121, 1125, 1128, 1131, 1132, 1133, 1134, 1136, 1137, 1138, 1142, 1162, 1165, 1168, 1169, 1170, 1176, 1185, 1195], "follow": [0, 2, 41, 46, 413, 439, 467, 478, 487, 497, 507, 511, 514, 523, 543, 627, 938, 942, 1101, 1102, 1104, 1108, 1110, 1112, 1115, 1119, 1121, 1125, 1126, 1128, 1131, 1132, 1133, 1134, 1135, 1137, 1139, 1143, 1147, 1161, 1165, 1169, 1175, 1184, 1185], "clig": [0, 1102, 1143], "far": [0, 2, 1102, 1115, 1131, 1133, 1134, 1151, 1162], "possibl": [0, 1, 2, 767, 773, 1102, 1104, 1108, 1109, 1119, 1131, 1133, 1143, 1169, 1184, 1194, 1195], "you": [0, 1, 204, 214, 215, 230, 1102, 1103, 1104, 1106, 1107, 1109, 1110, 1111, 1112, 1114, 1115, 1116, 1117, 1118, 1119, 1120, 1125, 1126, 1128, 1131, 1132, 1134, 1135, 1137, 1142, 1143, 1147, 1151, 1158, 1160, 1161, 1162, 1165, 1168, 1173, 1174, 1179, 1185, 1195], "ar": [0, 1, 2, 3, 17, 22, 31, 41, 46, 66, 67, 87, 88, 142, 155, 165, 204, 216, 267, 275, 281, 284, 293, 312, 313, 326, 329, 333, 343, 346, 351, 352, 365, 369, 375, 382, 383, 386, 387, 388, 395, 396, 407, 413, 415, 419, 424, 425, 436, 439, 445, 447, 450, 460, 462, 477, 695, 696, 719, 733, 737, 739, 767, 773, 830, 842, 844, 884, 899, 943, 955, 965, 991, 995, 1002, 1003, 1010, 1060, 1069, 1072, 1101, 1102, 1103, 1105, 1106, 1107, 1108, 1109, 1110, 1111, 1112, 1115, 1116, 1117, 1118, 1119, 1120, 1121, 1122, 1125, 1126, 1131, 1132, 1133, 1134, 1135, 1136, 1137, 1138, 1139, 1142, 1143, 1145, 1147, 1151, 1153, 1160, 1162, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1173, 1174, 1176, 1177, 1178, 1179, 1180, 1181, 1184, 1185, 1194, 1195], "run": [0, 2, 275, 326, 995, 1104, 1117, 1125, 1130, 1137, 1147, 1179], "thi": [0, 1, 4, 6, 21, 22, 42, 45, 46, 49, 50, 51, 56, 71, 72, 95, 97, 117, 123, 127, 132, 134, 137, 144, 204, 206, 214, 215, 219, 225, 229, 232, 234, 235, 251, 254, 296, 299, 337, 374, 377, 383, 384, 388, 390, 395, 396, 398, 402, 407, 412, 413, 414, 420, 421, 422, 426, 427, 431, 433, 436, 439, 443, 445, 448, 453, 457, 459, 462, 466, 467, 472, 473, 478, 482, 484, 490, 492, 505, 511, 514, 523, 524, 532, 535, 537, 542, 543, 544, 547, 598, 610, 615, 680, 695, 697, 719, 734, 737, 739, 747, 763, 820, 830, 842, 844, 884, 891, 925, 938, 942, 943, 944, 949, 951, 955, 959, 963, 964, 967, 968, 971, 973, 991, 1003, 1010, 1026, 1031, 1051, 1052, 1060, 1069, 1072, 1082, 1101, 1102, 1104, 1106, 1107, 1108, 1109, 1110, 1111, 1112, 1113, 1114, 1115, 1116, 1117, 1118, 1119, 1120, 1121, 1122, 1125, 1128, 1130, 1131, 1132, 1133, 1134, 1136, 1137, 1138, 1139, 1142, 1143, 1144, 1147, 1150, 1151, 1156, 1157, 1158, 1160, 1161, 1162, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1181, 1182, 1183, 1184, 1185, 1194, 1195, 1196], "an": [0, 1, 2, 3, 4, 7, 13, 17, 19, 22, 23, 24, 28, 31, 42, 44, 46, 61, 76, 91, 98, 104, 109, 115, 127, 138, 142, 146, 153, 155, 156, 161, 163, 165, 166, 168, 169, 170, 172, 173, 175, 177, 178, 179, 182, 183, 186, 187, 188, 190, 191, 195, 196, 200, 201, 203, 204, 207, 213, 214, 219, 222, 227, 229, 230, 232, 234, 236, 237, 245, 246, 251, 255, 261, 265, 266, 270, 271, 276, 278, 279, 280, 281, 282, 283, 285, 286, 287, 288, 290, 291, 294, 296, 300, 306, 310, 311, 313, 317, 319, 320, 327, 329, 330, 331, 332, 333, 335, 336, 339, 344, 345, 346, 348, 349, 350, 351, 352, 353, 355, 361, 362, 363, 364, 365, 370, 371, 374, 375, 378, 382, 383, 384, 386, 387, 388, 390, 391, 392, 395, 396, 398, 401, 402, 404, 405, 407, 413, 414, 417, 419, 422, 423, 424, 425, 426, 427, 428, 429, 435, 436, 437, 438, 439, 440, 442, 443, 445, 446, 449, 450, 452, 453, 454, 456, 457, 458, 460, 462, 464, 466, 467, 469, 470, 472, 473, 474, 475, 476, 477, 478, 482, 484, 487, 490, 493, 497, 504, 507, 511, 512, 513, 514, 515, 516, 519, 523, 524, 529, 532, 533, 535, 537, 542, 543, 544, 547, 549, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 582, 584, 585, 586, 588, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 606, 608, 610, 611, 612, 613, 614, 615, 618, 619, 622, 623, 625, 626, 627, 629, 637, 648, 649, 651, 654, 657, 659, 660, 662, 665, 666, 667, 668, 669, 670, 674, 675, 681, 688, 693, 695, 696, 697, 704, 719, 725, 727, 728, 729, 730, 731, 734, 739, 740, 748, 754, 762, 763, 770, 782, 815, 821, 831, 836, 837, 841, 842, 844, 845, 847, 856, 873, 877, 883, 884, 887, 904, 909, 915, 919, 920, 921, 926, 932, 937, 943, 944, 946, 948, 949, 950, 951, 953, 954, 955, 956, 959, 960, 963, 964, 965, 966, 967, 968, 971, 974, 980, 981, 986, 990, 996, 1000, 1003, 1004, 1005, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1017, 1020, 1021, 1022, 1023, 1024, 1032, 1037, 1039, 1047, 1049, 1051, 1052, 1058, 1062, 1063, 1067, 1069, 1070, 1071, 1073, 1074, 1075, 1078, 1079, 1083, 1086, 1087, 1088, 1091, 1094, 1095, 1098, 1104, 1105, 1107, 1108, 1109, 1110, 1112, 1113, 1115, 1117, 1118, 1119, 1120, 1121, 1122, 1125, 1129, 1130, 1131, 1132, 1133, 1134, 1135, 1138, 1139, 1142, 1143, 1146, 1147, 1148, 1150, 1151, 1152, 1155, 1156, 1158, 1159, 1160, 1161, 1162, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1183, 1184, 1185, 1195], "intern": [0, 144, 1102, 1109, 1169], "oak": [0, 1, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 236, 237, 238, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 712, 713, 718, 719, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 827, 828, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1103, 1105, 1106, 1108, 1112, 1114, 1117, 1118, 1119, 1120, 1121, 1122, 1128, 1130, 1132, 1133, 1134, 1135, 1136, 1137, 1138, 1139, 1140, 1141, 1143, 1145, 1150, 1158, 1160, 1168, 1179, 1183, 1185], "develop": [0, 1101, 1102, 1104, 1106, 1108, 1109, 1115, 1119, 1120, 1125, 1128, 1132, 1134, 1137, 1139, 1142, 1173], "need": [0, 1, 204, 1101, 1105, 1109, 1110, 1115, 1121, 1131, 1137, 1142, 1151, 1160, 1165, 1183, 1195], "preced": [0, 405, 423, 439, 1174], "poetri": [0, 1125, 1128, 1130, 1179], "shell": 0, "The": [0, 1, 2, 3, 4, 9, 14, 15, 17, 21, 22, 23, 25, 30, 31, 36, 39, 40, 41, 42, 43, 46, 52, 54, 55, 66, 67, 68, 69, 70, 73, 74, 75, 76, 77, 79, 84, 86, 87, 88, 89, 91, 92, 95, 96, 100, 105, 106, 111, 112, 118, 119, 121, 122, 124, 125, 126, 127, 128, 129, 131, 132, 133, 134, 135, 140, 147, 148, 150, 155, 156, 157, 165, 167, 168, 170, 171, 172, 173, 174, 175, 177, 179, 180, 181, 182, 183, 184, 187, 188, 189, 191, 192, 193, 195, 196, 197, 199, 200, 201, 209, 214, 216, 217, 218, 219, 223, 225, 232, 234, 236, 237, 238, 239, 241, 244, 245, 246, 247, 249, 257, 262, 263, 266, 272, 275, 281, 294, 302, 307, 308, 311, 321, 323, 324, 326, 333, 371, 375, 380, 382, 383, 387, 390, 393, 394, 395, 396, 398, 399, 404, 406, 407, 408, 410, 412, 413, 414, 419, 420, 424, 425, 427, 436, 438, 439, 446, 450, 454, 460, 462, 477, 495, 517, 518, 540, 615, 683, 689, 690, 695, 696, 697, 700, 701, 719, 727, 728, 729, 730, 737, 739, 750, 756, 757, 764, 767, 774, 782, 783, 785, 795, 796, 805, 806, 823, 830, 832, 833, 838, 842, 844, 884, 922, 928, 933, 934, 939, 941, 943, 955, 959, 960, 961, 967, 968, 976, 980, 982, 983, 988, 990, 991, 1003, 1006, 1010, 1021, 1034, 1037, 1040, 1041, 1042, 1049, 1054, 1062, 1064, 1069, 1070, 1071, 1073, 1079, 1083, 1088, 1091, 1095, 1101, 1104, 1106, 1107, 1108, 1109, 1110, 1111, 1114, 1116, 1117, 1118, 1119, 1120, 1121, 1125, 1126, 1128, 1129, 1130, 1131, 1132, 1133, 1134, 1137, 1138, 1139, 1142, 1143, 1145, 1147, 1151, 1158, 1165, 1168, 1169, 1170, 1171, 1173, 1174, 1178, 1179, 1180, 1183, 1184, 1185, 1195, 1196], "structur": [0, 1, 155, 165, 439, 450, 719, 737, 1063, 1101, 1108, 1109, 1113, 1115, 1117, 1119, 1131, 1147, 1184], "i": [0, 1, 2, 3, 4, 17, 22, 23, 24, 28, 31, 36, 41, 42, 44, 46, 49, 50, 51, 53, 56, 61, 68, 71, 72, 83, 86, 89, 95, 115, 117, 123, 127, 142, 144, 149, 155, 161, 163, 165, 166, 169, 175, 178, 184, 190, 193, 203, 204, 214, 215, 219, 225, 227, 229, 234, 235, 236, 238, 251, 276, 281, 282, 296, 313, 318, 327, 333, 335, 352, 354, 374, 375, 383, 386, 388, 390, 391, 395, 396, 398, 402, 404, 407, 415, 417, 420, 421, 422, 426, 427, 430, 432, 433, 434, 435, 437, 438, 439, 442, 443, 444, 445, 448, 449, 450, 452, 454, 455, 456, 457, 458, 464, 465, 468, 470, 473, 474, 475, 477, 478, 482, 484, 490, 505, 509, 511, 514, 523, 528, 532, 534, 537, 542, 543, 544, 547, 549, 580, 598, 615, 695, 700, 704, 719, 722, 737, 739, 741, 745, 763, 767, 770, 773, 782, 783, 787, 829, 842, 844, 845, 884, 941, 943, 944, 946, 948, 949, 951, 952, 953, 954, 955, 956, 957, 958, 961, 962, 963, 964, 967, 968, 970, 971, 980, 990, 991, 996, 1003, 1021, 1037, 1042, 1051, 1052, 1058, 1062, 1063, 1064, 1065, 1067, 1069, 1070, 1071, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1084, 1086, 1087, 1088, 1089, 1090, 1092, 1093, 1094, 1095, 1098, 1105, 1108, 1109, 1110, 1112, 1113, 1115, 1116, 1117, 1118, 1120, 1121, 1122, 1125, 1126, 1130, 1131, 1132, 1133, 1134, 1135, 1136, 1137, 1138, 1139, 1142, 1143, 1145, 1147, 1150, 1151, 1153, 1155, 1156, 1158, 1160, 1161, 1162, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1187, 1195, 1196], "input": [0, 2, 324, 333, 1101, 1107, 1108, 1110, 1112, 1117, 1118, 1119, 1121, 1128, 1131, 1132, 1138, 1145, 1147, 1156, 1158, 1160, 1165, 1168, 1169, 1170, 1171, 1174, 1175, 1179, 1183, 1185], "handl": [0, 1, 830, 842, 844, 884, 1111, 1116, 1117, 1131], "arg": [0, 1168, 1171, 1174, 1179, 1183, 1196], "AND": [0, 678, 941, 957, 958, 1151, 1153, 1155], "option": [0, 1, 214, 281, 282, 335, 695, 739, 1104, 1105, 1110, 1112, 1115, 1120, 1121, 1126, 1128, 1131, 1135, 1137, 1138, 1144, 1147, 1150, 1151, 1153, 1155, 1156, 1160, 1161, 1163, 1168, 1169, 1174, 1175, 1180, 1185, 1195], "valu": [0, 1, 3, 4, 5, 14, 15, 17, 20, 21, 22, 23, 24, 25, 46, 61, 76, 80, 93, 94, 95, 96, 105, 106, 112, 127, 128, 129, 130, 131, 136, 147, 148, 155, 157, 159, 165, 205, 214, 215, 217, 218, 219, 223, 225, 234, 236, 247, 251, 252, 253, 262, 263, 264, 265, 266, 267, 271, 272, 281, 296, 297, 298, 307, 308, 309, 310, 311, 312, 313, 314, 318, 319, 320, 321, 323, 324, 333, 374, 375, 376, 382, 383, 384, 386, 387, 388, 390, 391, 393, 394, 395, 396, 398, 404, 405, 407, 410, 412, 413, 414, 419, 422, 424, 435, 439, 440, 442, 445, 452, 457, 467, 469, 474, 475, 477, 478, 481, 482, 483, 484, 485, 486, 487, 488, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 511, 514, 517, 518, 523, 524, 528, 532, 534, 535, 537, 538, 539, 540, 542, 543, 544, 547, 615, 677, 679, 689, 690, 694, 695, 697, 698, 701, 719, 745, 746, 756, 757, 763, 764, 766, 767, 768, 782, 815, 816, 817, 818, 819, 826, 827, 829, 830, 832, 833, 837, 838, 840, 841, 842, 844, 849, 851, 857, 858, 859, 862, 863, 864, 870, 871, 872, 875, 876, 878, 884, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 900, 901, 906, 911, 913, 914, 917, 923, 933, 934, 938, 939, 941, 942, 943, 944, 955, 959, 972, 980, 982, 983, 988, 990, 991, 992, 993, 1003, 1029, 1030, 1037, 1040, 1041, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1054, 1057, 1060, 1061, 1062, 1069, 1075, 1086, 1095, 1102, 1109, 1115, 1125, 1131, 1166, 1169, 1170, 1171, 1176, 1177, 1178, 1182, 1184], "which": [0, 1, 3, 4, 17, 22, 28, 41, 46, 86, 89, 115, 161, 204, 227, 276, 327, 388, 396, 407, 417, 439, 466, 549, 695, 696, 697, 704, 719, 729, 733, 770, 830, 841, 842, 844, 845, 877, 884, 899, 909, 943, 946, 955, 967, 968, 996, 1037, 1058, 1062, 1063, 1069, 1079, 1088, 1101, 1102, 1104, 1108, 1109, 1110, 1111, 1112, 1113, 1115, 1116, 1117, 1120, 1121, 1125, 1126, 1128, 1131, 1134, 1142, 1143, 1147, 1160, 1165, 1166, 1169, 1173, 1176, 1179, 1183, 1184, 1185, 1195], "can": [0, 1, 2, 23, 46, 61, 76, 142, 219, 225, 232, 275, 281, 313, 326, 333, 346, 391, 407, 408, 439, 450, 509, 512, 513, 529, 552, 586, 600, 602, 603, 608, 615, 695, 696, 719, 818, 883, 884, 995, 1003, 1101, 1105, 1106, 1108, 1109, 1110, 1111, 1112, 1114, 1115, 1116, 1117, 1118, 1119, 1120, 1125, 1126, 1128, 1131, 1132, 1133, 1135, 1137, 1138, 1139, 1142, 1143, 1147, 1158, 1161, 1162, 1163, 1165, 1166, 1169, 1173, 1174, 1182, 1184, 1185, 1195, 1196], "short": [0, 1111, 1131, 1169], "specifi": [0, 333, 337, 338, 430, 439, 695, 709, 711, 712, 718, 719, 720, 721, 722, 724, 733, 739, 741, 941, 955, 957, 958, 961, 1063, 1102, 1104, 1108, 1110, 1115, 1117, 1118, 1119, 1120, 1125, 1128, 1131, 1133, 1137, 1138, 1147, 1156, 1161, 1163, 1165, 1169, 1170, 1175, 1176, 1179, 1181, 1184, 1185, 1195, 1196], "adapt": [0, 1101, 1102, 1104, 1107, 1108, 1109, 1111, 1112, 1116, 1117, 1118, 1119, 1120, 1122, 1128, 1129, 1131, 1132, 1133, 1137, 1139, 1142, 1143, 1154, 1167, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1178, 1179, 1181, 1183, 1184], "selector": [0, 1101, 1102, 1104, 1108, 1111, 1119, 1120, 1122, 1129, 1131, 1137, 1151, 1153, 1155, 1156, 1158, 1160, 1162, 1163, 1165, 1166, 1167], "document": [0, 14, 15, 25, 105, 106, 112, 147, 148, 157, 217, 218, 223, 262, 263, 272, 307, 308, 321, 391, 393, 394, 410, 437, 439, 445, 455, 517, 518, 540, 689, 690, 701, 756, 757, 764, 832, 833, 838, 933, 934, 939, 982, 983, 988, 1040, 1041, 1054, 1102, 1103, 1104, 1107, 1108, 1109, 1120, 1128, 1131, 1132, 1133, 1134, 1138, 1142, 1146, 1147, 1148, 1154, 1196], "ubergraph": [0, 1105, 1108, 1112, 1113, 1118, 1119, 1130, 1138, 1142, 1143, 1154, 1164, 1167, 1173, 1179, 1181, 1185], "fbbt": [0, 1131, 1135], "obo": [0, 1, 390, 391, 396, 398, 402, 404, 412, 414, 415, 420, 426, 438, 439, 455, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 938, 941, 942, 944, 954, 955, 1037, 1062, 1095, 1101, 1102, 1103, 1105, 1108, 1110, 1111, 1112, 1113, 1114, 1116, 1117, 1118, 1119, 1120, 1121, 1122, 1125, 1129, 1130, 1132, 1133, 1135, 1137, 1139, 1142, 1143, 1150, 1154, 1155, 1158, 1165, 1166, 1167, 1169, 1170, 1171, 1173, 1174, 1175, 1179, 1183, 1185, 1195], "cl": [0, 941, 955, 1101, 1102, 1106, 1107, 1108, 1112, 1125, 1131, 1132, 1137, 1139, 1155, 1166, 1168, 1179, 1183, 1185], "db": [0, 1107, 1126, 1137, 1138, 1150, 1165, 1168, 1169, 1175, 1179, 1185, 1195], "sqlite": [0, 1101, 1102, 1104, 1105, 1106, 1109, 1110, 1115, 1116, 1117, 1119, 1120, 1122, 1125, 1129, 1130, 1131, 1132, 1133, 1138, 1139, 1142, 1143, 1147, 1150, 1155, 1165, 1169, 1171, 1172, 1173, 1174, 1175, 1178, 1179, 1181, 1184, 1195], "It": [0, 1, 404, 407, 439, 454, 719, 737, 1101, 1102, 1104, 1108, 1109, 1111, 1115, 1116, 1117, 1118, 1120, 1125, 1131, 1142, 1166, 1169, 1179], "us": [0, 1, 3, 4, 19, 23, 24, 31, 36, 46, 91, 95, 109, 149, 153, 155, 165, 204, 214, 215, 219, 222, 225, 229, 230, 236, 242, 252, 264, 265, 266, 267, 270, 271, 275, 279, 281, 287, 297, 309, 310, 311, 312, 313, 317, 318, 319, 320, 323, 324, 326, 331, 333, 350, 375, 382, 384, 386, 387, 388, 390, 391, 395, 396, 398, 401, 404, 405, 408, 412, 413, 414, 419, 420, 439, 440, 455, 478, 481, 482, 486, 487, 490, 491, 509, 512, 513, 514, 520, 521, 522, 523, 524, 528, 529, 533, 534, 535, 537, 538, 542, 544, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 584, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 622, 625, 627, 637, 648, 649, 654, 657, 659, 660, 666, 667, 668, 670, 679, 693, 695, 697, 718, 719, 720, 739, 745, 762, 766, 767, 815, 817, 819, 826, 827, 836, 837, 841, 844, 884, 937, 938, 941, 942, 943, 986, 990, 991, 993, 995, 1003, 1010, 1030, 1037, 1045, 1047, 1049, 1052, 1057, 1060, 1062, 1069, 1070, 1071, 1075, 1078, 1079, 1086, 1087, 1088, 1095, 1105, 1106, 1108, 1110, 1111, 1112, 1113, 1114, 1116, 1117, 1118, 1120, 1121, 1122, 1128, 1129, 1130, 1132, 1133, 1134, 1135, 1137, 1138, 1139, 1142, 1143, 1144, 1145, 1147, 1150, 1151, 1153, 1155, 1156, 1157, 1158, 1160, 1161, 1162, 1163, 1165, 1166, 1169, 1170, 1171, 1172, 1175, 1176, 1177, 1179, 1181, 1182, 1183, 1184, 1185, 1194, 1195], "creat": [0, 2, 39, 40, 46, 478, 482, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 570, 615, 652, 1109, 1115, 1118, 1122, 1130, 1131, 1138, 1146, 1148, 1162, 1165, 1169, 1170, 1174, 1177], "individu": [0, 1, 313, 319, 329, 333, 339, 344, 345, 346, 351, 352, 355, 362, 363, 365, 370, 382, 386, 399, 404, 439, 446, 454, 511, 512, 513, 529, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 627, 637, 648, 649, 657, 660, 666, 667, 668, 670, 695, 697, 719, 725, 727, 728, 729, 730, 731, 734, 739, 740, 763, 782, 844, 851, 884, 885, 894, 943, 948, 949, 950, 951, 953, 955, 959, 960, 963, 964, 965, 966, 967, 968, 971, 980, 990, 1000, 1003, 1004, 1005, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1017, 1020, 1021, 1022, 1023, 1024, 1049, 1052, 1062, 1069, 1070, 1071, 1073, 1075, 1078, 1079, 1083, 1086, 1087, 1088, 1091, 1095, 1108, 1111, 1120, 1122, 1143, 1144, 1169, 1175, 1183], "For": [0, 1, 155, 165, 204, 219, 225, 234, 235, 697, 719, 734, 827, 829, 830, 842, 844, 865, 884, 903, 943, 955, 971, 1037, 1062, 1095, 1101, 1102, 1104, 1107, 1108, 1109, 1110, 1111, 1112, 1113, 1114, 1115, 1117, 1118, 1119, 1120, 1121, 1125, 1126, 1131, 1132, 1133, 1134, 1135, 1137, 1138, 1143, 1147, 1162, 1169, 1171, 1172, 1173, 1174, 1176, 1178, 1179, 1181, 1183, 1184, 1195, 1196], "alia": [0, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 219, 225, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 264, 265, 266, 267, 271, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 481, 482, 487, 490, 491, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 520, 521, 522, 523, 524, 529, 532, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 679, 694, 695, 696, 697, 698, 706, 707, 708, 709, 710, 711, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 881, 882, 883, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1057, 1060, 1061, 1062, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1102, 1106, 1109, 1111, 1131, 1169, 1174, 1179, 1185, 1195], "uberon": [0, 941, 955, 1102, 1108, 1109, 1112, 1118, 1119, 1120, 1125, 1126, 1131, 1133, 1137, 1142, 1151, 1158, 1166, 1168, 1169, 1173, 1174, 1179, 1185], "obi": [0, 95, 128, 478, 482, 487, 490, 505, 507, 508, 509, 511, 512, 513, 514, 523, 532, 537, 542, 543, 547, 577, 578, 580, 586, 627, 667, 1102, 1137, 1139, 1162, 1165, 1169], "further": [0, 1111, 1113, 1119], "implement": [0, 1, 991, 1010, 1101, 1104, 1108, 1111, 1113, 1118, 1119, 1122, 1125, 1126, 1129, 1131, 1132, 1135, 1137, 1138, 1143, 1145, 1147, 1150, 1151, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1162, 1163, 1164, 1165, 1167, 1169, 1171, 1173, 1175, 1176, 1179, 1181, 1182, 1183, 1184, 1185], "aggreg": [0, 3, 4, 17, 21, 22, 30, 46, 1113, 1131, 1154, 1167], "wrap": [0, 1120, 1137, 1150, 1152, 1155, 1159, 1161, 1164, 1165, 1166, 1169, 1171, 1172, 1174, 1178, 1179, 1181, 1182, 1184], "multiplex": 0, "over": [0, 1, 265, 280, 281, 287, 310, 332, 333, 350, 396, 426, 520, 521, 522, 695, 696, 719, 733, 737, 1105, 1108, 1109, 1114, 1115, 1118, 1119, 1120, 1125, 1131, 1139, 1142, 1143, 1168, 1169, 1170, 1175, 1179, 1183, 1184], "differ": [0, 1, 4, 142, 155, 159, 163, 165, 168, 169, 170, 172, 173, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 195, 196, 200, 201, 204, 407, 439, 442, 445, 452, 474, 475, 477, 782, 802, 1101, 1102, 1104, 1108, 1110, 1111, 1113, 1114, 1116, 1118, 1119, 1125, 1126, 1131, 1133, 1134, 1138, 1139, 1142, 1145, 1166, 1167, 1173, 1179, 1182, 1183, 1184, 1185, 1195], "endpoint": [0, 1104, 1108, 1131, 1132, 1139, 1142, 1143, 1151, 1157, 1158, 1159, 1164, 1166, 1175, 1179, 1183], "mani": [0, 1, 150, 1101, 1102, 1108, 1109, 1110, 1111, 1112, 1115, 1116, 1118, 1119, 1120, 1122, 1126, 1131, 1134, 1142, 1158, 1169, 1174], "take": [0, 1101, 1102, 1105, 1108, 1109, 1112, 1115, 1120, 1125, 1131, 1132, 1142, 1174, 1196], "primari": [0, 3, 4, 17, 21, 22, 46, 79, 1108, 1109, 1111, 1112, 1113, 1116, 1129, 1195], "argument": [0, 1102, 1104, 1120, 1131, 1144, 1147, 1151, 1153, 1155, 1168, 1169, 1172, 1185], "These": [0, 1, 1101, 1102, 1108, 1109, 1111, 1112, 1115, 1117, 1119, 1120, 1131, 1139, 1142, 1183, 1195], "typic": [0, 1, 31, 46, 214, 229, 236, 275, 326, 395, 396, 436, 439, 462, 941, 955, 995, 1102, 1104, 1108, 1109, 1110, 1111, 1112, 1115, 1120, 1134, 1142, 1147, 1168, 1169, 1179], "one": [0, 1, 2, 4, 36, 142, 150, 155, 163, 165, 166, 168, 169, 170, 172, 173, 177, 178, 179, 182, 183, 186, 187, 188, 190, 191, 195, 196, 200, 201, 204, 383, 439, 478, 482, 487, 490, 510, 511, 514, 523, 532, 535, 537, 542, 543, 547, 562, 695, 719, 724, 767, 773, 844, 891, 938, 942, 1102, 1107, 1108, 1110, 1112, 1113, 1115, 1118, 1119, 1120, 1122, 1125, 1126, 1131, 1134, 1136, 1137, 1142, 1143, 1144, 1146, 1148, 1151, 1154, 1168, 1169, 1171, 1174, 1176, 1184, 1195, 1196], "0000955": [0, 1116], "syntax": [0, 14, 15, 25, 105, 106, 112, 147, 148, 157, 214, 217, 218, 223, 229, 262, 263, 272, 307, 308, 321, 390, 393, 394, 398, 402, 410, 412, 414, 415, 420, 438, 478, 482, 490, 508, 511, 514, 517, 518, 523, 532, 535, 537, 540, 542, 543, 547, 566, 571, 689, 690, 695, 700, 701, 719, 739, 756, 757, 764, 832, 833, 838, 933, 934, 939, 982, 983, 988, 1040, 1041, 1054, 1102, 1104, 1107, 1108, 1111, 1125, 1131, 1150, 1167, 1169, 1172, 1179], "either": [0, 4, 8, 46, 50, 99, 127, 139, 165, 208, 236, 256, 281, 301, 333, 374, 375, 379, 382, 383, 384, 386, 387, 390, 391, 395, 398, 402, 405, 407, 413, 419, 439, 445, 494, 505, 615, 682, 719, 745, 749, 782, 787, 822, 884, 927, 944, 955, 975, 1003, 1033, 1069, 1107, 1108, 1109, 1115, 1118, 1120, 1126, 1131, 1165, 1169, 1174, 1185, 1196], "exact": [0, 408, 409, 487, 844, 891, 942, 1109, 1151, 1179], "match": [0, 142, 155, 163, 165, 167, 181, 184, 187, 188, 189, 190, 193, 195, 196, 197, 199, 313, 319, 323, 329, 333, 339, 344, 345, 346, 351, 352, 355, 357, 362, 363, 365, 370, 478, 482, 487, 490, 497, 506, 511, 514, 523, 532, 537, 542, 543, 547, 557, 561, 573, 590, 615, 632, 637, 695, 697, 700, 709, 712, 719, 722, 725, 727, 728, 729, 730, 740, 745, 782, 791, 980, 990, 991, 1002, 1003, 1021, 1063, 1102, 1115, 1119, 1120, 1125, 1128, 1131, 1139, 1151, 1160, 1168, 1169, 1174, 1176, 1179, 1182, 1183, 1196], "limb": [0, 1119, 1174, 1179], "plasma": 0, "membran": [0, 1119, 1161, 1168, 1169, 1170, 1183], "compound": 0, "t": [0, 1, 2, 204, 941, 955, 980, 990, 1003, 1063, 1101, 1105, 1106, 1108, 1110, 1111, 1112, 1115, 1116, 1119, 1120, 1121, 1125, 1128, 1131, 1137, 1139, 1142, 1151, 1160, 1165, 1169, 1180, 1185, 1195, 1196], "find": [0, 1101, 1105, 1118, 1131, 1168, 1174, 1181, 1183, 1184], "partial": [0, 1109, 1152, 1157, 1167, 1179], "fed": 0, "assum": [0, 700, 1118, 1119, 1120, 1131, 1132, 1138, 1158, 1162, 1165, 1169, 1181, 1185], "abov": [0, 1, 155, 165, 1104, 1115, 1117, 1119, 1120, 1125, 1131, 1132, 1137, 1158, 1169, 1195], "look": [0, 1111, 1113, 1115, 1119, 1128, 1131, 1132, 1169, 1175], "up": [0, 2, 1107, 1108, 1113, 1115, 1119, 1125, 1131, 1132, 1169, 1175, 1181, 1183, 1185], "two": [0, 4, 20, 30, 33, 34, 36, 46, 47, 48, 49, 50, 51, 54, 55, 56, 57, 58, 59, 60, 62, 63, 64, 65, 69, 70, 71, 72, 79, 81, 82, 83, 84, 86, 90, 91, 386, 439, 445, 449, 452, 464, 512, 513, 529, 532, 538, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 582, 584, 585, 586, 588, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 618, 619, 622, 623, 625, 626, 627, 637, 648, 649, 651, 654, 657, 659, 660, 665, 666, 667, 668, 670, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 782, 785, 793, 794, 795, 796, 797, 798, 799, 801, 804, 805, 806, 807, 808, 809, 844, 856, 884, 1102, 1104, 1108, 1111, 1115, 1116, 1118, 1119, 1120, 1132, 1135, 1137, 1164, 1165, 1169, 1170, 1171, 1176], "hand": [0, 142, 165, 1108, 1109, 1111, 1115, 1119, 1131, 1134, 1175, 1179], "foot": [0, 1119], "equival": [0, 383, 387, 390, 434, 439, 445, 447, 460, 473, 844, 879, 884, 1109, 1115, 1117, 1119, 1169], "0002398": [0, 1119, 1158, 1179], "0002397": 0, "shorten": [0, 1108], "p": [0, 21, 45, 46, 94, 95, 127, 128, 129, 130, 386, 439, 1110, 1115, 1119, 1120, 1121, 1125, 1131, 1132, 1135, 1147, 1155, 1158, 1161, 1169, 1170, 1178], "aka": [0, 1108, 1119, 1169, 1185], "type": [0, 1, 3, 4, 17, 20, 21, 22, 23, 24, 41, 43, 76, 77, 94, 95, 96, 155, 159, 184, 190, 193, 204, 214, 215, 219, 225, 229, 234, 251, 252, 264, 265, 266, 267, 271, 275, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 326, 357, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 399, 404, 405, 407, 412, 413, 414, 419, 445, 448, 449, 452, 464, 467, 475, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 511, 514, 523, 524, 528, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 600, 602, 603, 608, 627, 630, 664, 679, 694, 695, 697, 698, 745, 763, 766, 767, 768, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 918, 938, 941, 942, 943, 944, 954, 956, 959, 963, 980, 990, 991, 992, 993, 995, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1057, 1060, 1061, 1062, 1063, 1071, 1072, 1086, 1096, 1102, 1108, 1109, 1110, 1111, 1116, 1117, 1118, 1119, 1120, 1125, 1126, 1131, 1134, 1139, 1150, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1175, 1178, 1185, 1195, 1196], "filter": [0, 844, 849, 851, 857, 858, 859, 862, 863, 870, 871, 872, 875, 876, 878, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 900, 901, 913, 914, 917, 1119, 1168, 1169, 1170, 1174, 1175, 1176], "comma": [0, 1102, 1121], "delimit": [0, 1183], "space": [0, 275, 326, 995, 1131, 1174], "biolog": [0, 1, 31, 46, 1108, 1111, 1117, 1133, 1175], "is_a": [0, 3, 4, 17, 20, 39, 52, 54, 55, 56, 62, 64, 69, 70, 72, 142, 175, 193, 266, 267, 311, 312, 375, 382, 383, 384, 387, 395, 405, 413, 419, 478, 482, 485, 487, 490, 491, 497, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 523, 524, 529, 532, 535, 537, 538, 539, 542, 543, 544, 547, 551, 553, 554, 555, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 590, 591, 593, 594, 595, 597, 598, 599, 600, 601, 602, 603, 605, 606, 610, 611, 612, 617, 618, 627, 628, 629, 633, 634, 635, 636, 637, 645, 646, 647, 648, 649, 651, 653, 654, 656, 660, 661, 662, 663, 664, 666, 667, 668, 670, 672, 674, 675, 767, 768, 774, 779, 780, 783, 784, 785, 796, 800, 801, 806, 810, 811, 813, 826, 829, 830, 840, 844, 849, 850, 851, 857, 862, 863, 870, 871, 872, 875, 879, 885, 888, 892, 894, 895, 896, 898, 900, 901, 905, 907, 910, 911, 913, 917, 918, 938, 941, 942, 1030, 1037, 1042, 1045, 1049, 1050, 1061, 1062, 1101, 1102, 1108, 1119, 1121, 1131, 1133, 1147, 1158, 1168, 1169, 1175, 1178], "rdf": [0, 1, 3, 4, 6, 17, 22, 23, 24, 25, 28, 37, 44, 61, 76, 86, 97, 112, 115, 137, 144, 157, 161, 167, 181, 184, 199, 206, 214, 223, 225, 227, 254, 272, 276, 299, 321, 327, 375, 377, 382, 386, 390, 396, 398, 399, 407, 410, 412, 413, 414, 417, 419, 426, 443, 449, 452, 464, 474, 477, 478, 482, 487, 490, 491, 492, 507, 508, 510, 511, 514, 523, 524, 532, 535, 537, 539, 540, 542, 543, 544, 547, 549, 553, 554, 555, 562, 584, 610, 615, 619, 627, 654, 657, 663, 670, 680, 696, 701, 704, 747, 764, 766, 770, 786, 815, 820, 838, 844, 845, 884, 887, 906, 907, 925, 938, 939, 941, 942, 943, 944, 946, 956, 959, 967, 968, 973, 988, 996, 1031, 1054, 1058, 1102, 1104, 1106, 1108, 1109, 1111, 1112, 1117, 1118, 1119, 1126, 1131, 1132, 1133, 1137, 1138, 1139, 1147, 1161, 1165, 1169, 1185], "subclassof": [0, 386, 388, 390, 433, 439, 490, 491, 537, 539, 615, 630, 1102, 1104, 1108, 1110, 1112, 1119, 1120, 1131, 1132, 1133, 1137, 1139, 1147, 1161, 1165, 1169, 1176, 1178], "part_of": [0, 1102, 1119, 1168, 1175], "bfo": [0, 1, 1102, 1108, 1115, 1119, 1131, 1137, 1161, 1169], "0000050": [0, 1102, 1108, 1109, 1115, 1119, 1131, 1137, 1161, 1169], "so": [0, 2, 1104, 1105, 1109, 1115, 1117, 1119, 1125, 1131, 1134, 1137, 1142, 1151, 1160, 1162, 1173, 1174, 1181, 1185], "interfac": [0, 1, 2, 204, 1104, 1105, 1106, 1108, 1109, 1111, 1114, 1116, 1117, 1118, 1119, 1120, 1122, 1125, 1129, 1130, 1131, 1132, 1133, 1138, 1139, 1143, 1150, 1151, 1154, 1157, 1158, 1160, 1161, 1164, 1165, 1167, 1178, 1181, 1182, 1185, 1194, 1195, 1196], "understand": [0, 1, 214, 229, 1105, 1108, 1111, 1112, 1131, 1195], "shortcut": [0, 1102], "e": [0, 1, 3, 4, 17, 22, 42, 46, 50, 53, 55, 70, 71, 318, 354, 386, 390, 391, 396, 404, 405, 419, 422, 423, 439, 445, 446, 453, 454, 455, 719, 737, 844, 874, 884, 890, 943, 955, 959, 1037, 1062, 1095, 1102, 1104, 1108, 1109, 1110, 1117, 1119, 1120, 1128, 1131, 1139, 1142, 1147, 1150, 1158, 1161, 1166, 1168, 1169, 1171, 1172, 1174, 1176, 1178, 1179, 1181, 1184, 1185], "between": [0, 1, 2, 3, 4, 17, 22, 23, 30, 34, 36, 37, 41, 43, 46, 47, 48, 49, 50, 51, 53, 54, 55, 56, 61, 66, 67, 68, 69, 70, 71, 72, 76, 77, 79, 80, 82, 83, 84, 86, 87, 88, 89, 91, 92, 142, 155, 159, 163, 165, 168, 169, 170, 172, 173, 177, 178, 179, 182, 183, 184, 185, 186, 187, 188, 190, 191, 195, 196, 199, 200, 201, 214, 229, 386, 390, 391, 404, 433, 439, 445, 446, 449, 450, 452, 454, 455, 464, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 782, 785, 793, 794, 795, 796, 797, 798, 799, 801, 804, 805, 806, 807, 808, 809, 844, 856, 884, 941, 958, 1108, 1109, 1110, 1113, 1115, 1119, 1129, 1134, 1144, 1145, 1160, 1168, 1169, 1171, 1175, 1180, 1185], "name": [0, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 156, 159, 163, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 231, 232, 233, 234, 235, 236, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 281, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 326, 329, 330, 331, 332, 333, 334, 339, 340, 341, 342, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 399, 404, 405, 406, 407, 408, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 497, 499, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 519, 520, 521, 522, 523, 524, 528, 529, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 678, 679, 687, 694, 695, 696, 697, 698, 700, 706, 707, 708, 709, 710, 711, 712, 713, 718, 719, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 745, 763, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 881, 882, 883, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 924, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 995, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1053, 1057, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1104, 1107, 1108, 1109, 1112, 1115, 1117, 1118, 1119, 1128, 1131, 1132, 1138, 1153, 1166, 1169, 1170, 1175, 1181, 1185, 1195], "class": [0, 1, 2, 31, 93, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 204, 238, 399, 402, 430, 643, 864, 1101, 1108, 1109, 1110, 1111, 1115, 1117, 1119, 1120, 1128, 1134, 1145, 1146, 1147, 1148, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1167, 1168, 1169, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1190, 1192, 1195, 1196], "part": [0, 16, 46, 107, 127, 151, 165, 220, 236, 268, 281, 315, 333, 397, 439, 526, 615, 691, 719, 737, 758, 782, 834, 884, 935, 955, 984, 1003, 1044, 1069, 1101, 1102, 1104, 1108, 1111, 1115, 1117, 1119, 1120, 1125, 1127, 1129, 1130, 1160, 1169, 1195], "draw": [0, 1003, 1026], "subgraph": [0, 1158, 1175], "start": [0, 2, 505, 700, 841, 884, 909, 1105, 1108, 1119, 1128, 1129, 1130, 1169, 1175], "from": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 165, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 203, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 712, 713, 714, 715, 716, 717, 718, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1101, 1102, 1104, 1107, 1108, 1109, 1110, 1111, 1112, 1115, 1116, 1117, 1118, 1119, 1120, 1121, 1125, 1126, 1128, 1130, 1132, 1133, 1135, 1137, 1139, 1140, 1142, 1143, 1144, 1146, 1147, 1148, 1150, 1152, 1156, 1158, 1159, 1160, 1161, 1162, 1163, 1164, 1165, 1166, 1167, 1168, 1169, 1170, 1171, 1173, 1174, 1175, 1176, 1179, 1180, 1183, 1185, 1195, 1196], "trace": 0, "upward": 0, "through": [0, 695, 1060, 1069, 1082, 1108, 1114, 1125, 1128, 1132, 1137, 1185, 1195], "section": [0, 1102, 1106, 1108, 1111, 1114, 1115, 1125, 1131, 1132, 1135, 1168, 1169], "autogener": [0, 2], "inlin": [0, 3, 17, 22, 24, 32, 80, 85, 159, 185, 214, 215, 219, 237, 239, 240, 241, 265, 266, 280, 285, 287, 310, 311, 314, 332, 348, 350, 360, 390, 391, 433, 437, 444, 448, 455, 465, 468, 768, 794, 799, 804, 809, 819, 829, 830, 842, 844, 848, 856, 858, 859, 865, 868, 876, 878, 889, 890, 891, 899, 903, 908, 914, 943, 968, 971, 992, 998, 1050, 1051, 1060, 1061, 1084, 1096], "doc": [0, 2, 203, 250, 390, 398, 402, 412, 414, 415, 420, 438, 1108, 1125, 1126, 1131, 1137, 1181, 1196], "should": [0, 2, 14, 15, 21, 22, 25, 78, 105, 106, 112, 147, 148, 157, 217, 218, 223, 251, 262, 263, 272, 296, 307, 308, 321, 374, 390, 393, 394, 396, 398, 407, 410, 412, 414, 420, 426, 443, 478, 484, 487, 497, 505, 507, 511, 514, 517, 518, 523, 537, 540, 543, 544, 577, 627, 689, 690, 695, 701, 709, 719, 756, 757, 763, 764, 832, 833, 838, 842, 844, 891, 933, 934, 938, 939, 942, 944, 982, 983, 988, 1040, 1041, 1051, 1052, 1054, 1063, 1105, 1107, 1108, 1109, 1110, 1112, 1113, 1115, 1118, 1125, 1128, 1131, 1137, 1169, 1171, 1172, 1174, 1178, 1179, 1181, 1184, 1195], "get": [0, 1, 1104, 1105, 1109, 1112, 1115, 1116, 1117, 1119, 1126, 1129, 1130, 1151, 1169, 1174, 1175, 1176, 1182, 1185, 1195], "same": [0, 1, 2, 4, 142, 155, 165, 166, 169, 175, 178, 844, 891, 943, 955, 963, 967, 1108, 1109, 1112, 1116, 1118, 1119, 1121, 1125, 1131, 1133, 1139, 1142, 1143, 1168, 1169, 1185], "result": [0, 1, 21, 45, 95, 96, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 131, 132, 134, 135, 155, 159, 164, 165, 176, 194, 204, 695, 697, 698, 719, 724, 725, 727, 728, 729, 730, 731, 734, 737, 740, 991, 992, 998, 1002, 1003, 1026, 1037, 1042, 1049, 1050, 1051, 1057, 1060, 1061, 1062, 1064, 1065, 1067, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1083, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1098, 1104, 1107, 1108, 1115, 1119, 1120, 1125, 1126, 1129, 1138, 1143, 1150, 1168, 1169, 1170, 1171, 1172, 1174, 1178, 1179, 1181, 1183, 1184, 1196], "help": [0, 1105, 1109, 1111, 1126, 1131, 1195], "oaklib": [0, 1101, 1107, 1109, 1112, 1116, 1117, 1118, 1119, 1122, 1125, 1128, 1131, 1132, 1133, 1137, 1139, 1142, 1143, 1144, 1145, 1146, 1147, 1148, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1162, 1163, 1164, 1165, 1166, 1167, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1196], "A": [0, 1, 2, 3, 4, 5, 10, 11, 12, 14, 15, 17, 18, 19, 20, 23, 24, 25, 26, 27, 30, 31, 32, 33, 34, 36, 37, 38, 42, 43, 46, 47, 48, 49, 50, 51, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 76, 77, 79, 80, 81, 82, 83, 84, 86, 87, 88, 89, 90, 91, 92, 93, 95, 96, 101, 102, 103, 105, 106, 108, 109, 112, 113, 114, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 131, 132, 133, 134, 135, 136, 141, 143, 144, 145, 147, 148, 149, 152, 153, 155, 157, 158, 159, 160, 163, 164, 165, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 205, 210, 211, 212, 214, 217, 218, 221, 222, 223, 224, 225, 226, 235, 236, 238, 248, 253, 258, 259, 260, 262, 263, 264, 267, 269, 270, 271, 272, 273, 274, 275, 278, 279, 281, 282, 283, 284, 286, 288, 289, 290, 291, 292, 293, 298, 303, 304, 305, 307, 308, 309, 312, 314, 316, 317, 319, 320, 321, 322, 325, 326, 330, 331, 333, 335, 336, 337, 338, 339, 342, 343, 344, 345, 349, 353, 355, 358, 360, 361, 362, 363, 364, 366, 369, 370, 374, 375, 376, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 393, 394, 395, 396, 398, 400, 401, 402, 404, 405, 407, 408, 410, 411, 413, 415, 416, 419, 420, 421, 422, 423, 426, 428, 429, 430, 432, 433, 434, 437, 438, 439, 440, 442, 443, 444, 445, 446, 447, 448, 450, 452, 454, 455, 456, 458, 460, 465, 466, 467, 468, 469, 470, 474, 475, 476, 477, 481, 482, 487, 488, 489, 496, 497, 498, 500, 504, 505, 506, 507, 508, 509, 510, 512, 513, 517, 518, 519, 525, 527, 529, 532, 533, 538, 540, 541, 542, 543, 546, 548, 552, 553, 554, 555, 556, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 575, 577, 578, 579, 580, 582, 584, 585, 586, 588, 589, 590, 591, 593, 594, 595, 596, 598, 599, 600, 601, 602, 603, 604, 605, 608, 609, 610, 611, 612, 614, 615, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 637, 639, 640, 648, 649, 650, 651, 654, 657, 659, 660, 662, 665, 666, 667, 668, 670, 673, 677, 684, 685, 686, 689, 690, 692, 693, 694, 695, 696, 701, 702, 703, 709, 711, 712, 713, 718, 719, 720, 721, 722, 724, 733, 737, 738, 739, 741, 742, 746, 751, 752, 753, 756, 757, 760, 762, 764, 765, 767, 768, 769, 773, 774, 775, 776, 777, 778, 779, 780, 782, 785, 793, 794, 795, 796, 797, 798, 799, 801, 804, 805, 806, 807, 808, 809, 816, 818, 824, 825, 828, 832, 833, 835, 836, 838, 839, 840, 843, 844, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 865, 868, 870, 871, 872, 874, 875, 876, 878, 879, 883, 884, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 899, 900, 901, 905, 907, 910, 911, 912, 913, 914, 917, 918, 922, 923, 929, 930, 931, 933, 934, 936, 937, 938, 939, 940, 941, 942, 945, 952, 954, 955, 956, 957, 958, 961, 962, 969, 970, 972, 977, 978, 979, 982, 983, 985, 986, 988, 989, 991, 992, 994, 995, 998, 999, 1003, 1026, 1027, 1029, 1035, 1036, 1037, 1038, 1040, 1041, 1042, 1046, 1047, 1050, 1051, 1054, 1055, 1056, 1061, 1064, 1065, 1067, 1069, 1070, 1071, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1084, 1086, 1087, 1088, 1089, 1090, 1092, 1093, 1094, 1095, 1098, 1100, 1101, 1108, 1110, 1111, 1113, 1115, 1117, 1120, 1128, 1131, 1132, 1133, 1138, 1139, 1143, 1144, 1147, 1165, 1168, 1169, 1171, 1177, 1179, 1183, 1185], "subcommand": [0, 1102, 1104, 1107, 1179], "must": [0, 6, 14, 15, 25, 97, 105, 106, 112, 137, 147, 148, 157, 206, 217, 218, 223, 254, 262, 263, 272, 299, 307, 308, 313, 321, 333, 352, 377, 393, 394, 402, 410, 478, 482, 487, 490, 492, 497, 505, 507, 511, 514, 517, 518, 523, 532, 537, 540, 542, 543, 547, 565, 598, 605, 627, 667, 680, 689, 690, 700, 701, 747, 756, 757, 764, 820, 832, 833, 838, 925, 933, 934, 939, 941, 957, 958, 973, 982, 983, 988, 1031, 1040, 1041, 1054, 1063, 1107, 1131, 1137, 1165, 1169, 1174, 1175, 1185], "pass": [0, 215, 1060, 1069, 1082, 1108, 1109, 1110, 1117, 1120, 1126, 1131, 1135, 1138, 1144, 1147, 1160, 1168, 1172, 1174, 1184, 1185], "most": [0, 1, 21, 78, 375, 388, 396, 407, 413, 419, 477, 697, 734, 767, 773, 782, 1102, 1104, 1108, 1109, 1111, 1112, 1115, 1118, 1119, 1120, 1133, 1134, 1137, 1138, 1142, 1143, 1158, 1166, 1168, 1173, 1174, 1180], "requir": [0, 2, 20, 62, 64, 94, 95, 121, 130, 155, 168, 172, 177, 219, 225, 232, 264, 267, 284, 292, 309, 312, 343, 366, 390, 395, 398, 404, 412, 414, 427, 438, 454, 478, 482, 487, 490, 505, 507, 511, 514, 523, 524, 532, 535, 537, 542, 543, 547, 577, 610, 627, 697, 727, 745, 766, 767, 768, 777, 778, 781, 787, 803, 805, 815, 817, 818, 819, 827, 830, 837, 842, 844, 866, 938, 941, 942, 944, 954, 993, 1001, 1030, 1037, 1043, 1045, 1057, 1062, 1068, 1088, 1095, 1104, 1106, 1109, 1111, 1112, 1119, 1125, 1126, 1128, 1134, 1135, 1142, 1184], "specif": [0, 1, 2, 4, 10, 11, 12, 42, 46, 51, 95, 101, 102, 103, 123, 127, 141, 142, 143, 145, 165, 210, 211, 212, 214, 229, 236, 258, 259, 260, 281, 303, 304, 305, 323, 333, 381, 385, 389, 439, 496, 498, 500, 615, 684, 685, 686, 719, 751, 752, 753, 782, 824, 825, 828, 884, 929, 930, 931, 955, 977, 978, 979, 991, 1003, 1010, 1035, 1036, 1038, 1069, 1104, 1108, 1109, 1110, 1115, 1118, 1119, 1120, 1125, 1126, 1128, 1131, 1137, 1138, 1144, 1158, 1166, 1169, 1179, 1184, 1185], "ani": [0, 27, 42, 46, 111, 114, 127, 160, 165, 204, 219, 225, 226, 232, 236, 251, 266, 274, 281, 285, 296, 311, 325, 333, 348, 374, 407, 416, 439, 445, 478, 482, 487, 490, 497, 505, 511, 514, 523, 532, 537, 542, 543, 546, 547, 555, 565, 597, 615, 667, 696, 703, 719, 737, 769, 782, 843, 884, 945, 955, 994, 1003, 1052, 1056, 1069, 1103, 1105, 1106, 1107, 1108, 1109, 1110, 1111, 1112, 1113, 1115, 1116, 1119, 1120, 1121, 1125, 1128, 1131, 1133, 1134, 1137, 1139, 1142, 1144, 1147, 1151, 1157, 1158, 1161, 1164, 1165, 1168, 1169, 1170, 1171, 1175, 1176, 1177, 1179, 1181, 1182, 1183, 1195, 1196], "g": [0, 1, 4, 50, 55, 70, 71, 318, 354, 390, 391, 404, 405, 419, 439, 455, 719, 737, 844, 874, 890, 943, 959, 1037, 1062, 1095, 1104, 1108, 1109, 1110, 1115, 1117, 1119, 1120, 1128, 1142, 1147, 1150, 1158, 1161, 1166, 1168, 1169, 1171, 1172, 1174, 1178, 1179, 1181, 1184, 1185], "h": 0, "v": [0, 943, 963, 1126, 1137, 1169, 1180], "verbos": [0, 1131], "q": [0, 1160], "quiet": 0, "stacktrac": [0, 1102, 1119, 1125], "If": [0, 2, 4, 21, 42, 45, 46, 56, 72, 78, 155, 165, 184, 190, 193, 383, 402, 420, 439, 472, 695, 739, 767, 773, 941, 943, 951, 955, 964, 970, 991, 1002, 1003, 1102, 1107, 1111, 1115, 1117, 1119, 1120, 1121, 1125, 1128, 1131, 1132, 1135, 1137, 1142, 1143, 1144, 1147, 1160, 1165, 1168, 1169, 1170, 1172, 1174, 1175, 1177, 1183, 1185], "show": [0, 697, 719, 740, 1101, 1111, 1112, 1115, 1117, 1119, 1131, 1133, 1137, 1168, 1169, 1174], "full": [0, 695, 697, 719, 722, 725, 1102, 1104, 1112, 1116, 1121, 1131, 1133, 1142, 1158, 1175, 1182], "error": [0, 1053, 1105, 1115, 1121, 1126, 1147, 1174], "default": [0, 21, 78, 1057, 1060, 1069, 1085, 1104, 1107, 1108, 1109, 1113, 1115, 1116, 1118, 1119, 1121, 1125, 1137, 1147, 1158, 1169, 1170, 1172, 1173, 1175, 1183, 1184], "fals": [0, 3, 5, 21, 46, 78, 93, 95, 125, 127, 136, 165, 205, 214, 236, 239, 253, 281, 298, 313, 333, 346, 376, 439, 478, 482, 487, 488, 490, 507, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 566, 568, 571, 615, 627, 677, 719, 746, 768, 777, 778, 782, 816, 884, 923, 955, 972, 1003, 1029, 1069, 1119, 1121, 1147, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "save": [0, 1138, 1169, 1173, 1177], "save_a": 0, "mutat": [0, 1109, 1138], "where": [0, 1, 142, 386, 439, 695, 719, 722, 1037, 1042, 1063, 1064, 1065, 1067, 1069, 1070, 1071, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1086, 1087, 1088, 1089, 1090, 1092, 1093, 1094, 1095, 1098, 1101, 1105, 1108, 1109, 1111, 1112, 1113, 1115, 1116, 1117, 1118, 1120, 1121, 1125, 1142, 1147, 1169, 1174, 1176, 1178, 1180, 1182, 1194, 1195], "chang": [0, 4, 30, 31, 34, 36, 42, 46, 47, 48, 49, 50, 51, 54, 55, 56, 69, 70, 71, 72, 79, 82, 83, 84, 86, 91, 250, 844, 856, 884, 1049, 1107, 1108, 1110, 1115, 1120, 1121, 1125, 1129, 1130, 1131, 1137, 1142, 1147, 1168, 1169, 1171, 1177, 1185], "autosav": [0, 1138, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "determin": [0, 4, 21, 30, 36, 45, 46, 78, 79, 155, 165, 695, 696, 700, 709, 711, 712, 718, 719, 720, 721, 722, 724, 733, 739, 741, 844, 884, 918, 1037, 1042, 1064, 1065, 1067, 1069, 1070, 1071, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1086, 1087, 1088, 1089, 1090, 1092, 1093, 1094, 1095, 1098, 1108, 1115, 1121, 1147, 1168, 1169, 1174, 1180, 1184], "automat": [0, 2, 4, 50, 1108, 1111, 1117, 1125, 1137, 1160, 1161, 1195], "place": [0, 142, 155, 163, 165, 1101, 1108, 1138, 1144], "named_prefix_map": 0, "prefixcc": 0, "expans": [0, 1, 1169], "metamodel": [0, 202, 295, 372, 471, 671, 743, 812, 916, 1028, 1097, 1169], "metamodel_map": 0, "overrid": [0, 1057, 1060, 1069, 1085, 1096, 1109, 1112, 1169], "properti": [0, 1, 21, 25, 46, 112, 127, 157, 165, 223, 236, 272, 281, 321, 333, 375, 382, 384, 388, 390, 395, 396, 398, 399, 405, 406, 407, 410, 413, 419, 439, 478, 481, 482, 483, 486, 487, 490, 504, 505, 506, 507, 508, 509, 510, 514, 523, 528, 532, 534, 535, 538, 540, 542, 543, 544, 547, 615, 695, 696, 697, 701, 719, 764, 782, 830, 838, 844, 884, 939, 955, 988, 1003, 1037, 1054, 1062, 1069, 1104, 1108, 1109, 1113, 1119, 1120, 1121, 1147, 1169, 1176, 1177, 1178, 1179, 1182, 1184, 1196], "import": [0, 250, 391, 535, 615, 744, 814, 844, 884, 900, 1101, 1107, 1108, 1109, 1110, 1112, 1116, 1117, 1118, 1119, 1120, 1125, 1126, 1128, 1132, 1133, 1137, 1139, 1142, 1143, 1145, 1147, 1150, 1156, 1158, 1160, 1161, 1162, 1165, 1166, 1168, 1169, 1170, 1171, 1173, 1174, 1175, 1179, 1183, 1185, 1195, 1196], "depth": [0, 1185], "import_depth": [0, 1185], "maximum": [0, 1, 131, 695, 719, 724, 991, 1003, 1006, 1063, 1118, 1120, 1169, 1185, 1195], "travers": [0, 687, 694, 719, 1104, 1108, 1113, 1131, 1139, 1175, 1185], "current": [0, 14, 15, 25, 105, 106, 112, 147, 148, 157, 217, 218, 223, 262, 263, 272, 307, 308, 321, 383, 393, 394, 410, 424, 517, 518, 540, 689, 690, 701, 756, 757, 764, 832, 833, 838, 933, 934, 939, 982, 983, 988, 1040, 1041, 1054, 1104, 1107, 1108, 1110, 1115, 1119, 1120, 1126, 1130, 1131, 1137, 1138, 1145, 1151, 1153, 1160, 1161, 1162, 1164, 1165, 1168, 1169, 1171, 1172, 1176, 1181, 1184, 1185, 1196], "onli": [0, 1, 214, 229, 384, 390, 396, 426, 433, 941, 943, 955, 958, 963, 965, 991, 1003, 1104, 1108, 1111, 1118, 1120, 1121, 1126, 1131, 1138, 1142, 1145, 1147, 1151, 1160, 1162, 1168, 1169, 1174, 1175, 1181, 1182, 1184], "pronto": [0, 1, 1104, 1107, 1108, 1135, 1142, 1143, 1154, 1156, 1163, 1167, 1169], "locat": [0, 1132, 1137], "associations_typ": 0, "prefer": [0, 1, 2, 696, 1131, 1174], "preferred_languag": [0, 1118], "lexic": [0, 204, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 309, 310, 311, 312, 320, 330, 331, 332, 333, 336, 337, 338, 343, 348, 349, 350, 353, 358, 361, 364, 366, 369, 371, 1105, 1111, 1115, 1129, 1131, 1142, 1167, 1169, 1184], "element": [0, 31, 46, 214, 230, 236, 242, 264, 271, 279, 281, 286, 288, 289, 290, 291, 292, 309, 320, 331, 333, 349, 353, 358, 361, 364, 366, 439, 450, 478, 482, 490, 504, 511, 514, 523, 532, 537, 542, 543, 547, 614, 615, 1063, 1102, 1108, 1109, 1110, 1111, 1120, 1134, 1139, 1143, 1168, 1169, 1175, 1179, 1184], "other": [0, 1, 31, 46, 204, 219, 225, 232, 375, 388, 390, 396, 398, 407, 413, 419, 420, 421, 430, 432, 433, 434, 438, 439, 443, 444, 445, 448, 455, 456, 458, 465, 468, 470, 477, 697, 719, 730, 1102, 1104, 1108, 1109, 1110, 1111, 1113, 1114, 1115, 1116, 1117, 1119, 1120, 1125, 1128, 1130, 1132, 1145, 1161, 1167, 1169, 1171, 1175, 1179, 1184, 1195], "other_languag": 0, "addit": [0, 3, 17, 21, 22, 45, 46, 80, 214, 229, 236, 439, 450, 509, 1037, 1060, 1062, 1069, 1070, 1082, 1108, 1110, 1113, 1116, 1119, 1120, 1121, 1125, 1128, 1130, 1131, 1138, 1144, 1147, 1150, 1168, 1172, 1177, 1183, 1185, 1195], "request": [0, 1179], "requests_cache_db": 0, "all": [0, 1, 21, 155, 159, 165, 184, 185, 190, 193, 264, 265, 275, 280, 281, 287, 289, 309, 310, 313, 314, 326, 332, 333, 350, 352, 358, 360, 387, 390, 391, 433, 437, 439, 445, 447, 448, 460, 483, 484, 615, 643, 842, 848, 865, 883, 884, 899, 922, 992, 995, 998, 1003, 1101, 1102, 1103, 1105, 1107, 1108, 1111, 1112, 1116, 1117, 1118, 1119, 1120, 1121, 1125, 1131, 1133, 1134, 1135, 1137, 1138, 1142, 1143, 1144, 1160, 1162, 1168, 1169, 1170, 1174, 1175, 1176, 1177, 1178, 1180, 1181, 1182, 1183, 1184, 1185, 1195], "http": [0, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 236, 237, 238, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 712, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1098, 1099, 1100, 1101, 1102, 1104, 1108, 1110, 1111, 1112, 1115, 1116, 1118, 1120, 1121, 1125, 1126, 1131, 1136, 1137, 1140, 1147, 1152, 1158, 1159, 1161, 1166, 1169, 1171, 1174, 1179, 1181, 1183, 1185, 1186, 1195], "file": [0, 2, 391, 1101, 1105, 1108, 1111, 1116, 1117, 1118, 1120, 1122, 1126, 1129, 1130, 1132, 1133, 1135, 1142, 1144, 1145, 1147, 1154, 1156, 1163, 1167, 1168, 1169, 1172, 1173, 1183, 1185], "w": [0, 1137, 1153], "wrap_adapt": 0, "anoth": [0, 3, 17, 30, 37, 43, 46, 53, 61, 66, 67, 68, 76, 77, 79, 80, 84, 86, 87, 88, 89, 92, 155, 165, 204, 337, 420, 439, 943, 951, 955, 1102, 1108, 1110, 1118, 1119, 1125, 1131, 1168, 1169, 1171, 1174, 1180, 1195], "llm": [0, 1106, 1122, 1129, 1154, 1167, 1183], "semsimian": [0, 1113], "input_typ": 0, "format": [0, 2, 396, 426, 478, 482, 487, 490, 510, 511, 514, 523, 532, 535, 537, 542, 543, 547, 562, 1105, 1108, 1109, 1110, 1112, 1113, 1115, 1116, 1117, 1119, 1121, 1131, 1132, 1133, 1138, 1139, 1145, 1146, 1147, 1161, 1163, 1168, 1169, 1185, 1195], "permiss": [0, 1160], "vari": [0, 1108, 1109, 1138], "depend": [0, 4, 49, 51, 384, 439, 991, 1010, 1108, 1116, 1128, 1131, 1135, 1137, 1138, 1151, 1169], "context": [0, 1108, 1109, 1113, 1128, 1195], "add": [0, 478, 482, 490, 509, 511, 514, 523, 529, 532, 537, 542, 543, 547, 1061, 1118, 1119, 1125, 1126, 1128, 1132, 1150, 1168, 1169, 1174, 1185], "merg": [0, 1, 384, 478, 482, 490, 501, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 615, 844, 884, 892, 1113, 1118, 1131, 1136, 1137, 1169], "profil": [0, 478, 482, 487, 490, 505, 507, 508, 509, 510, 511, 514, 523, 532, 537, 542, 543, 547, 552, 560, 565, 577, 578, 580, 586, 591, 598, 627, 667, 844, 874, 884, 1112, 1118, 1120, 1181], "0001988": 0, "explicit": [0, 4, 49, 51, 1110, 1131, 1137, 1174, 1185], "fetch": [0, 1104, 1108, 1130, 1169, 1174], "envo": [0, 1120, 1168], "core": [0, 3, 17, 22, 31, 38, 46, 53, 202, 295, 372, 390, 433, 439, 450, 471, 567, 615, 671, 743, 812, 916, 1028, 1097, 1108, 1110, 1112, 1113, 1133, 1142, 1169, 1174], "behavior": [0, 21, 30, 45, 46, 78, 79, 1109, 1121, 1131, 1133, 1134, 1137, 1138, 1147, 1169, 1179, 1196], "simpl": [0, 1, 204, 214, 236, 238, 239, 386, 388, 390, 433, 439, 445, 449, 450, 452, 464, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 782, 785, 793, 794, 795, 796, 797, 798, 799, 801, 804, 805, 806, 807, 808, 809, 1101, 1102, 1106, 1108, 1111, 1113, 1115, 1116, 1119, 1134, 1142, 1154, 1161, 1167, 1169, 1170, 1183, 1194], "datamodel": [0, 1, 120, 164, 165, 203, 250, 275, 281, 282, 283, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 334, 335, 336, 337, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 782, 912, 969, 995, 1026, 1037, 1062, 1095, 1100, 1101, 1108, 1119, 1126, 1129, 1130, 1131, 1133, 1134, 1138, 1142, 1145, 1147, 1150, 1156, 1158, 1168, 1169, 1171, 1174, 1175, 1176, 1182, 1183, 1184, 1185], "tupl": [0, 1101, 1109, 1116, 1119, 1156, 1161, 1163, 1165, 1168, 1169, 1171, 1175, 1176, 1178, 1179, 1180, 1181, 1183, 1196], "being": [0, 1, 31, 46, 204, 383, 424, 425, 439, 445, 472, 473, 478, 482, 490, 508, 511, 512, 513, 514, 523, 529, 532, 535, 537, 542, 543, 547, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 627, 637, 648, 649, 657, 660, 666, 667, 668, 670, 697, 734, 767, 782, 795, 805, 830, 842, 844, 865, 884, 1108, 1109, 1115, 1130, 1131, 1194], "some": [0, 1, 31, 46, 383, 384, 386, 388, 424, 435, 439, 457, 512, 513, 529, 542, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 584, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 622, 625, 627, 637, 648, 649, 654, 657, 659, 660, 666, 667, 668, 670, 941, 955, 970, 1102, 1104, 1108, 1109, 1110, 1111, 1114, 1115, 1116, 1117, 1118, 1119, 1121, 1125, 1131, 1132, 1137, 1138, 1142, 1151, 1161, 1165, 1166, 1168, 1169, 1173, 1175, 1177, 1179, 1183, 1194, 1195], "standard": [0, 1, 2, 275, 326, 374, 396, 413, 420, 422, 439, 467, 995, 1102, 1104, 1106, 1108, 1109, 1110, 1112, 1113, 1116, 1118, 1119, 1120, 1121, 1131, 1133, 1134, 1158, 1161, 1195], "vocabulari": [0, 214, 229, 375, 382, 396, 407, 408, 413, 419, 420, 439, 477, 844, 884, 889, 891, 1037, 1062, 1095, 1101, 1109, 1111, 1116, 1118, 1119, 1121, 1126, 1133, 1158, 1168, 1169, 1175, 1195], "sko": [0, 1, 219, 234, 318, 354, 478, 482, 487, 490, 505, 506, 507, 509, 510, 511, 514, 523, 532, 537, 542, 543, 547, 552, 557, 560, 561, 577, 590, 591, 595, 627, 637, 696, 844, 890, 1108, 1109, 1111, 1112, 1116, 1118, 1131, 1195], "altlabel": [0, 478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 552, 696, 1109], "oboinowl": [0, 413, 439, 467, 482, 487, 532, 537, 542, 547, 589, 596, 622, 623, 624, 625, 626, 639, 659, 673, 1109, 1112, 1116, 1117, 1169, 1195], "etc": [0, 1, 2, 225, 235, 390, 448, 1108, 1120, 1131, 1173, 1185], "know": [0, 1101, 1105, 1109, 1131, 1133, 1165, 1195], "model": [0, 1, 18, 19, 31, 41, 95, 108, 109, 127, 131, 152, 153, 165, 203, 204, 221, 222, 238, 269, 270, 281, 316, 317, 333, 400, 401, 407, 439, 450, 507, 509, 527, 533, 577, 615, 627, 692, 693, 719, 744, 760, 762, 782, 814, 835, 836, 884, 936, 937, 944, 955, 985, 986, 991, 1003, 1026, 1046, 1047, 1049, 1069, 1105, 1106, 1108, 1111, 1113, 1116, 1117, 1119, 1122, 1129, 1142, 1144, 1145, 1154, 1168, 1169, 1183], "give": [0, 1, 155, 165, 1109, 1119, 1125, 1131, 1142, 1176], "back": [0, 1, 396, 426, 1131, 1142, 1143, 1156, 1163], "richer": 0, "data": [0, 1, 31, 41, 203, 204, 238, 406, 439, 450, 744, 814, 826, 884, 912, 1049, 1062, 1069, 1070, 1071, 1075, 1078, 1079, 1086, 1087, 1088, 1095, 1100, 1104, 1105, 1106, 1107, 1108, 1111, 1112, 1113, 1115, 1116, 1121, 1129, 1131, 1134, 1137, 1142, 1144, 1145, 1158, 1160, 1162, 1168, 1182, 1183], "present": [0, 4, 42, 46, 82, 83, 155, 165, 166, 169, 175, 178, 204, 383, 388, 390, 395, 433, 439, 448, 462, 472, 473, 1104, 1119, 1121, 1139, 1147, 1169, 1175, 1176, 1183, 1195], "includ": [0, 1, 2, 21, 45, 46, 390, 433, 439, 448, 450, 504, 505, 506, 507, 508, 509, 510, 512, 513, 529, 543, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 627, 637, 648, 649, 657, 660, 666, 667, 668, 670, 696, 719, 737, 844, 878, 884, 888, 900, 991, 999, 1002, 1003, 1048, 1069, 1099, 1102, 1103, 1108, 1110, 1111, 1112, 1115, 1116, 1117, 1119, 1120, 1121, 1125, 1128, 1131, 1133, 1138, 1139, 1143, 1147, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1178, 1179, 1181, 1182, 1183, 1184, 1195], "proven": [0, 214, 236, 249, 407, 439, 1110], "In": [0, 1, 2, 214, 229, 944, 955, 1101, 1108, 1109, 1110, 1111, 1112, 1113, 1115, 1117, 1118, 1119, 1120, 1121, 1128, 1131, 1133, 1134, 1137, 1142, 1147, 1160, 1161, 1169, 1176, 1185, 1195], "futur": [0, 1104, 1107, 1108, 1115, 1120, 1125, 1131, 1132, 1137, 1138, 1142, 1161, 1168, 1175, 1176, 1181, 1185], "mai": [0, 1, 2, 4, 6, 21, 45, 49, 51, 97, 137, 204, 206, 214, 229, 254, 299, 337, 377, 384, 420, 492, 680, 747, 820, 827, 829, 830, 903, 925, 941, 942, 943, 954, 955, 956, 961, 968, 973, 1031, 1104, 1107, 1108, 1109, 1110, 1111, 1115, 1116, 1117, 1118, 1119, 1120, 1125, 1128, 1131, 1137, 1138, 1142, 1143, 1151, 1160, 1161, 1169, 1170, 1171, 1173, 1175, 1176, 1177, 1179, 1181, 1182, 1183, 1184, 1185, 1194, 1195], "becom": [0, 4, 42, 46, 49, 51, 318, 354, 1117, 1120, 1147], "true": [0, 3, 4, 5, 17, 20, 21, 22, 24, 32, 33, 36, 37, 38, 41, 42, 45, 46, 49, 50, 51, 53, 62, 64, 66, 67, 71, 78, 80, 82, 83, 84, 85, 87, 88, 90, 92, 93, 94, 95, 96, 121, 127, 130, 133, 136, 155, 159, 165, 166, 167, 168, 169, 172, 175, 177, 178, 181, 184, 185, 186, 190, 191, 193, 198, 199, 205, 214, 215, 219, 225, 229, 230, 232, 235, 236, 237, 239, 240, 241, 242, 249, 251, 253, 264, 265, 266, 267, 271, 280, 281, 284, 285, 286, 287, 289, 292, 293, 296, 298, 309, 310, 311, 312, 313, 314, 319, 320, 332, 333, 339, 343, 344, 345, 346, 348, 349, 350, 352, 355, 358, 360, 362, 363, 366, 369, 370, 374, 375, 376, 382, 383, 384, 387, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 430, 431, 432, 433, 434, 436, 437, 438, 439, 444, 447, 448, 454, 455, 456, 459, 462, 465, 466, 468, 469, 477, 478, 481, 482, 483, 484, 487, 488, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 523, 524, 528, 529, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 552, 556, 557, 560, 561, 562, 564, 565, 566, 567, 570, 571, 572, 573, 574, 577, 578, 579, 582, 584, 585, 586, 587, 588, 590, 591, 592, 594, 595, 596, 598, 600, 602, 603, 604, 606, 608, 609, 610, 612, 614, 615, 616, 630, 631, 632, 637, 638, 639, 643, 646, 649, 651, 652, 654, 655, 656, 657, 658, 659, 661, 662, 663, 664, 666, 668, 670, 676, 677, 679, 694, 695, 697, 698, 706, 707, 709, 713, 719, 726, 727, 728, 733, 736, 739, 745, 746, 763, 766, 767, 768, 781, 782, 783, 787, 794, 799, 802, 803, 804, 805, 809, 815, 816, 817, 818, 819, 826, 827, 829, 830, 837, 842, 844, 848, 856, 858, 859, 864, 865, 866, 868, 876, 878, 884, 886, 889, 890, 891, 893, 899, 902, 903, 906, 908, 914, 923, 938, 941, 942, 943, 944, 949, 950, 951, 954, 955, 957, 958, 960, 961, 962, 963, 964, 965, 966, 968, 970, 971, 972, 980, 990, 991, 992, 993, 998, 999, 1001, 1002, 1003, 1011, 1012, 1019, 1027, 1029, 1030, 1037, 1043, 1045, 1050, 1051, 1052, 1057, 1060, 1061, 1062, 1068, 1069, 1084, 1088, 1095, 1096, 1108, 1109, 1117, 1119, 1121, 1133, 1144, 1147, 1148, 1160, 1161, 1168, 1169, 1170, 1174, 1175, 1177, 1179, 1180, 1182, 1183, 1184, 1195], "provenancem": 0, "o": [0, 21, 45, 46, 386, 405, 439, 1107, 1112, 1115, 1119, 1120, 1121, 1125, 1126, 1131, 1132, 1135, 1138, 1145, 1147, 1151, 1161, 1162, 1169, 1174], "output": [0, 2, 21, 46, 78, 324, 333, 1102, 1112, 1116, 1121, 1125, 1126, 1131, 1135, 1138, 1144, 1145], "output_typ": 0, "desir": [0, 1108, 1137, 1138, 1174], "": [0, 1, 21, 24, 44, 45, 46, 386, 439, 545, 844, 884, 1063, 1105, 1108, 1110, 1117, 1118, 1119, 1125, 1128, 1132, 1142, 1143, 1169], "given": [0, 1063, 1109, 1110, 1121, 1144, 1147, 1169, 1176, 1180, 1181, 1182, 1183, 1185, 1195], "here": [0, 1, 396, 426, 819, 884, 897, 941, 958, 1103, 1108, 1111, 1115, 1117, 1118, 1119, 1120, 1121, 1125, 1126, 1128, 1131, 1132, 1138, 1140, 1142, 1147, 1162, 1168, 1169, 1174, 1175, 1183], "mean": [0, 1, 111, 142, 150, 216, 275, 326, 390, 399, 403, 406, 407, 408, 409, 439, 444, 497, 678, 687, 696, 700, 767, 782, 801, 924, 995, 1053, 1063, 1107, 1108, 1109, 1111, 1119, 1131, 1133, 1139, 1169], "transit": [0, 512, 513, 529, 547, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 582, 584, 585, 586, 588, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 618, 619, 622, 623, 625, 626, 627, 637, 648, 649, 651, 654, 657, 659, 660, 665, 666, 667, 668, 670, 1104, 1171, 1175, 1176, 1181], "closur": [0, 3, 4, 17, 22, 42, 46, 49, 51, 66, 67, 87, 88, 391, 1104, 1108, 1168], "parent": [0, 155, 165, 167, 168, 170, 171, 175, 181, 187, 188, 189, 193, 386, 449, 1115, 1131, 1132, 1169, 1178, 1182], "just": [0, 1, 2, 1102, 1105, 1117, 1119, 1131], "owl": [0, 1, 203, 204, 374, 383, 384, 386, 387, 388, 390, 395, 396, 399, 405, 406, 407, 423, 429, 435, 439, 445, 453, 456, 457, 460, 462, 472, 476, 478, 482, 487, 490, 491, 505, 511, 514, 523, 532, 535, 537, 538, 539, 542, 543, 544, 547, 551, 553, 554, 555, 558, 562, 563, 568, 571, 580, 582, 583, 587, 588, 597, 606, 610, 613, 615, 617, 618, 629, 633, 634, 635, 636, 645, 646, 647, 651, 653, 656, 661, 662, 669, 670, 672, 674, 675, 826, 829, 837, 840, 844, 864, 874, 884, 901, 919, 920, 944, 1105, 1108, 1110, 1111, 1112, 1114, 1116, 1117, 1119, 1121, 1128, 1129, 1130, 1131, 1133, 1134, 1137, 1139, 1145, 1147, 1161, 1162, 1167, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1178, 1179, 1181, 1184, 1185], "4023094": 0, "ancestri": [0, 1104, 1175], "graph": [0, 1, 203, 374, 375, 382, 383, 384, 386, 387, 388, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 421, 432, 433, 434, 438, 439, 443, 444, 445, 448, 450, 455, 456, 465, 468, 1105, 1108, 1113, 1120, 1121, 1129, 1130, 1134, 1137, 1139, 1142, 1154, 1158, 1159, 1164, 1165, 1166, 1167, 1168, 1169, 1173, 1175, 1181, 1184, 1185], "like": [0, 1, 407, 700, 829, 941, 955, 1101, 1102, 1104, 1108, 1109, 1110, 1111, 1115, 1116, 1117, 1118, 1119, 1120, 1125, 1126, 1128, 1131, 1133, 1134, 1138, 1142, 1143, 1151, 1162, 1168, 1173, 1184, 1195], "relat": [0, 1, 3, 17, 22, 46, 66, 67, 87, 88, 155, 159, 163, 164, 165, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 182, 183, 184, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 408, 409, 478, 482, 490, 501, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 615, 643, 744, 844, 884, 898, 941, 958, 1103, 1104, 1108, 1109, 1110, 1113, 1120, 1137, 1139, 1142, 1145, 1165, 1166, 1167, 1173, 1175, 1181], "constrain": [0, 384, 421, 431, 439, 445, 453, 459, 497, 615, 943, 955, 1119, 1131, 1168, 1169, 1174, 1176], "backend": [0, 1101, 1111, 1112, 1129, 1130, 1132, 1139, 1169, 1194], "goblet": 0, "cell": [0, 1106, 1108, 1119, 1120, 1125, 1132, 1137, 1139, 1153, 1169], "go": [0, 1, 31, 46, 390, 391, 404, 439, 455, 478, 482, 487, 490, 505, 507, 509, 511, 514, 523, 532, 537, 542, 543, 547, 565, 577, 580, 598, 627, 667, 829, 830, 903, 941, 955, 1037, 1062, 1095, 1101, 1108, 1109, 1117, 1119, 1120, 1121, 1125, 1128, 1131, 1132, 1134, 1138, 1139, 1145, 1151, 1155, 1156, 1160, 1161, 1165, 1168, 1169, 1170, 1171, 1174, 1175, 1181, 1183, 1185, 1195], "0005773": [0, 1119, 1161, 1169, 1170, 1175], "0005737": [0, 1119, 1161, 1169], "python": [0, 204, 1101, 1105, 1108, 1111, 1112, 1113, 1117, 1120, 1126, 1128, 1129, 1130, 1131, 1134, 1138, 1143, 1162, 1185, 1187, 1194, 1195], "api": [0, 1104, 1105, 1108, 1120, 1125, 1126, 1131, 1138, 1139, 1142, 1150, 1152, 1153, 1154, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1186], "incatool": [0, 497, 1102, 1108, 1126, 1166, 1195], "github": [0, 2, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 482, 490, 497, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 1102, 1104, 1108, 1111, 1126, 1136, 1140, 1141, 1152, 1159, 1162, 1166, 1186, 1195], "io": [0, 390, 398, 402, 412, 414, 415, 420, 438, 1108, 1111, 1125, 1195], "access": [0, 1, 497, 1101, 1102, 1105, 1108, 1110, 1112, 1113, 1116, 1125, 1128, 1131, 1133, 1134, 1137, 1139, 1157, 1158, 1160, 1161, 1162, 1165, 1185, 1186, 1195], "kit": [0, 497, 1102, 1104, 1111, 1125, 1195], "obograph": [0, 1, 204, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 1109, 1129, 1130, 1135, 1145, 1146, 1147, 1148, 1156, 1158, 1167, 1169, 1173], "separ": [0, 1, 2, 1102, 1109, 1110, 1117, 1120, 1121, 1138, 1139, 1143, 1168], "shorthand": [0, 482, 532, 542, 547, 615, 1108, 1110, 1185], "m": [0, 1116, 1125, 1131, 1153, 1169], "method": [0, 1, 1101, 1104, 1105, 1108, 1109, 1115, 1117, 1119, 1120, 1121, 1132, 1133, 1134, 1138, 1143, 1158, 1161, 1168, 1169, 1171, 1173, 1174, 1175, 1181, 1183, 1184, 1185, 1195], "graph_traversal_method": 0, "whether": [0, 1108, 1109, 1117, 1118, 1121, 1139, 1143, 1147, 1164, 1169, 1170, 1171, 1172, 1173, 1174, 1178, 1179, 1181, 1184], "formal": [0, 1, 383, 439, 941, 957, 958, 1102, 1108, 1110, 1111, 1112, 1119, 1125, 1169, 1181], "entail": [0, 142, 155, 165, 844, 878, 884, 1102, 1108, 1113, 1115, 1133, 1169, 1176, 1181, 1182], "walk": [0, 1108, 1119, 1132, 1135, 1175], "hop": [0, 1108, 1119], "each": [0, 1, 142, 155, 163, 165, 204, 275, 323, 326, 333, 367, 439, 450, 829, 995, 1102, 1104, 1108, 1109, 1111, 1119, 1120, 1121, 1125, 1128, 1131, 1134, 1142, 1143, 1147, 1166, 1169, 1171, 1172, 1174, 1178, 1179, 1181, 1183, 1184, 1195], "piec": [0, 1, 1108, 1110, 1111, 1183], "text": [0, 111, 142, 150, 204, 216, 275, 326, 382, 399, 406, 408, 413, 478, 482, 490, 497, 507, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 577, 585, 669, 678, 687, 696, 700, 844, 862, 863, 884, 924, 980, 990, 991, 993, 995, 1000, 1004, 1005, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1017, 1020, 1021, 1022, 1023, 1024, 1053, 1063, 1101, 1105, 1108, 1111, 1113, 1115, 1120, 1125, 1128, 1129, 1131, 1139, 1151, 1153, 1167, 1168, 1169, 1173, 1179], "entiti": [0, 1, 3, 4, 17, 22, 23, 24, 31, 41, 44, 46, 61, 68, 86, 95, 127, 134, 135, 144, 159, 165, 176, 194, 214, 229, 230, 231, 233, 236, 238, 239, 241, 242, 243, 244, 249, 374, 375, 382, 383, 384, 386, 387, 390, 391, 395, 396, 398, 405, 407, 412, 413, 414, 419, 420, 422, 426, 428, 429, 438, 439, 440, 442, 443, 445, 452, 458, 466, 467, 469, 470, 474, 475, 476, 477, 497, 519, 524, 615, 696, 719, 737, 745, 767, 773, 782, 791, 795, 797, 798, 805, 807, 808, 844, 884, 891, 918, 991, 999, 1002, 1003, 1026, 1108, 1109, 1110, 1111, 1113, 1118, 1119, 1129, 1131, 1134, 1143, 1150, 1153, 1156, 1165, 1168, 1169, 1170, 1173, 1174, 1175, 1176, 1177, 1180, 1181, 1182, 1184], "recognit": [0, 1003, 1026, 1183], "bioport": [0, 1, 1105, 1108, 1130, 1138, 1139, 1154, 1167, 1169, 1174, 1183], "have": [0, 1, 2, 214, 229, 407, 439, 450, 478, 482, 487, 490, 497, 505, 509, 510, 511, 512, 513, 514, 523, 529, 532, 535, 537, 542, 543, 547, 552, 562, 586, 600, 602, 603, 608, 615, 818, 883, 884, 938, 942, 943, 955, 971, 1063, 1101, 1102, 1103, 1104, 1105, 1107, 1108, 1110, 1111, 1115, 1116, 1117, 1118, 1119, 1120, 1125, 1126, 1128, 1131, 1133, 1134, 1137, 1138, 1142, 1143, 1151, 1169, 1195], "built": [0, 1108, 1133], "support": [0, 3, 4, 17, 22, 43, 46, 84, 92, 382, 390, 396, 420, 426, 448, 1101, 1105, 1108, 1109, 1113, 1115, 1119, 1120, 1128, 1131, 1133, 1142, 1151, 1153, 1162, 1165, 1168, 1169, 1179, 1184], "case": [0, 1, 28, 115, 142, 161, 227, 275, 276, 326, 327, 388, 417, 549, 695, 704, 712, 719, 770, 845, 946, 995, 996, 1058, 1101, 1104, 1108, 1110, 1111, 1112, 1113, 1116, 1119, 1120, 1121, 1135, 1142, 1147, 1161, 1162, 1169, 1174, 1183, 1185], "function": [0, 1104, 1108, 1111, 1115, 1116, 1117, 1125, 1128, 1131, 1132, 1136, 1138, 1143, 1144, 1167, 1183, 1186, 1187, 1188, 1189, 1190, 1191, 1192, 1194], "enlarg": 0, "nucleu": [0, 1101, 1121, 1128, 1138, 1145, 1156, 1161, 1165, 1169, 1170, 1171, 1174, 1175, 1183, 1185], "peripher": 0, "blood": 0, "basic": [0, 155, 165, 1101, 1104, 1106, 1108, 1113, 1115, 1116, 1117, 1118, 1119, 1120, 1125, 1126, 1129, 1130, 1134, 1142, 1154, 1158, 1167, 1173, 1184], "algorithm": [0, 266, 281, 285, 311, 333, 348], "base": [0, 1, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 18, 19, 25, 26, 27, 28, 29, 42, 46, 49, 50, 51, 93, 95, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 112, 113, 114, 115, 116, 127, 131, 136, 137, 138, 139, 140, 141, 143, 144, 145, 146, 147, 148, 149, 151, 152, 153, 154, 156, 157, 158, 160, 161, 162, 205, 206, 207, 208, 209, 210, 211, 212, 213, 217, 218, 220, 221, 222, 223, 224, 226, 227, 228, 236, 238, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 268, 269, 270, 272, 273, 274, 275, 276, 277, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 315, 316, 317, 321, 322, 324, 325, 326, 327, 328, 333, 347, 376, 377, 378, 379, 380, 381, 385, 389, 392, 393, 394, 397, 400, 401, 402, 410, 411, 415, 416, 417, 418, 420, 451, 488, 489, 492, 493, 494, 495, 496, 498, 500, 515, 516, 517, 518, 519, 525, 526, 527, 533, 540, 541, 545, 546, 548, 549, 550, 677, 680, 681, 682, 683, 684, 685, 686, 688, 689, 690, 691, 692, 693, 699, 701, 702, 703, 704, 705, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 764, 765, 769, 770, 771, 772, 782, 802, 816, 820, 821, 822, 823, 824, 825, 828, 831, 832, 833, 834, 835, 836, 838, 839, 842, 843, 845, 846, 848, 865, 883, 884, 899, 922, 923, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 939, 940, 945, 946, 947, 972, 973, 974, 975, 976, 977, 978, 979, 981, 982, 983, 984, 985, 986, 987, 988, 989, 994, 995, 996, 997, 1029, 1031, 1032, 1033, 1034, 1035, 1036, 1038, 1039, 1040, 1041, 1044, 1046, 1047, 1052, 1054, 1055, 1056, 1058, 1059, 1069, 1104, 1106, 1107, 1108, 1111, 1113, 1115, 1126, 1131, 1142, 1144, 1164, 1169, 1179, 1183, 1185, 1196], "builtin": [0, 1108, 1119], "slow": [0, 1107, 1120, 1125, 1143, 1168], "index": [0, 204, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 320, 332, 333, 350, 829, 1108, 1125, 1129, 1142, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "re": [0, 1137], "everi": [0, 155, 165, 1112, 1115, 1119, 1120, 1131, 1171], "time": [0, 4, 9, 46, 100, 127, 140, 165, 209, 236, 257, 281, 302, 333, 380, 439, 495, 615, 683, 719, 750, 782, 823, 841, 877, 884, 909, 928, 955, 976, 1003, 1034, 1069, 1106, 1114, 1115, 1119, 1131, 1133, 1137, 1138, 1174], "To": [0, 1104, 1107, 1109, 1116, 1117, 1119, 1120, 1129, 1131, 1134, 1138, 1147, 1156, 1158, 1161, 1163, 1165, 1166, 1168, 1169, 1174], "preserv": 0, "On": [0, 1104, 1110, 1112, 1117, 1119, 1137, 1195], "subsequ": [0, 1183], "iter": [0, 695, 1105, 1108, 1134, 1166, 1168, 1169, 1170, 1171, 1174, 1175, 1176, 1178, 1179, 1180, 1181, 1183, 1184, 1194], "reus": [0, 1126], "pars": [0, 21, 30, 45, 46, 78, 79, 420, 1105, 1108, 1161, 1169, 1185], "gilda": [0, 1154, 1167], "instal": [0, 1105, 1122, 1128, 1130, 1137], "extra": [0, 214, 229, 1125, 1131, 1185], "whole": [0, 1126, 1131, 1169, 1180], "perform": [0, 991, 1003, 1049, 1069, 1070, 1073, 1083, 1091, 1104, 1108, 1117, 1119, 1120, 1126, 1131, 1132, 1142, 1153, 1161, 1166, 1173, 1181, 1183], "ground": [0, 991, 1003, 1106, 1109, 1125, 1183], "brca2": 0, "flag": [0, 1110, 1115, 1120, 1121, 1147], "plugin": [0, 1104, 1108, 1122, 1129, 1130, 1183], "oakx": [0, 2, 1128, 1136], "spaci": [0, 1128, 1183], "bero": 0, "myeloid": 0, "deriv": [0, 1137], "suppressor": 0, "yield": [0, 266, 275, 281, 285, 294, 311, 326, 333, 348, 371, 995, 1101, 1108, 1113, 1143, 1168, 1169, 1171, 1174, 1175, 1176, 1178, 1180, 1181, 1183, 1184], "confid": [0, 318, 333, 373, 990, 1003, 1042, 1069, 1131], "0": [0, 2, 3, 4, 17, 20, 21, 22, 23, 24, 95, 96, 131, 150, 155, 159, 214, 215, 219, 225, 264, 265, 266, 267, 271, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 478, 481, 482, 487, 490, 491, 504, 505, 506, 507, 508, 509, 510, 511, 514, 523, 524, 532, 535, 537, 538, 539, 542, 543, 544, 547, 679, 694, 695, 697, 698, 745, 766, 767, 768, 815, 817, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 938, 941, 942, 943, 944, 980, 990, 991, 992, 993, 1037, 1042, 1048, 1049, 1050, 1051, 1057, 1060, 1061, 1062, 1125, 1131, 1136, 1168, 1169, 1170, 1175], "8": [0, 1108, 1119, 1129, 1130, 1169], "object_alias": [0, 990, 1003], "mdsc": 0, "object_id": [0, 697, 719, 767, 782, 990, 1003, 1042, 1069, 1101, 1116, 1131, 1174, 1183], "mesh_d000072737": 0, "object_label": [0, 3, 17, 22, 41, 46, 697, 719, 767, 782, 990, 1003, 1112, 1131, 1137, 1183], "subject_end": [0, 980, 990, 1003, 1021, 1131, 1183], "30": [0, 1169], "subject_start": [0, 980, 990, 1003, 1021, 1131, 1183], "w3id": [0, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 236, 237, 238, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 471, 671, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 712, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1098, 1099, 1100, 1101, 1116, 1126, 1171, 1174, 1179, 1183], "org": [0, 1, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 236, 237, 238, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 390, 391, 404, 439, 455, 471, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 712, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1098, 1099, 1100, 1101, 1104, 1108, 1110, 1111, 1112, 1115, 1116, 1118, 1121, 1126, 1131, 1135, 1147, 1158, 1169, 1171, 1174, 1179, 1181, 1183, 1185, 1195], "word": [0, 275, 326, 995], "span": [0, 695, 719, 722, 1108, 1168], "entir": [0, 829, 830, 848, 865, 883, 884, 899, 903, 922, 991, 1003, 1121, 1126, 1169, 1172, 1175, 1184], "text_fil": [0, 1183], "newlin": 0, "entri": [0, 1117, 1121, 1128, 1147], "distinct": [0, 1, 415, 509, 844, 875, 884, 891, 911, 1108, 1109, 1165, 1168, 1175, 1185], "lexical_index_fil": 0, "recreat": [0, 2], "unless": [0, 28, 115, 161, 227, 276, 327, 417, 549, 704, 770, 845, 946, 996, 1058, 1121, 1131, 1147, 1170, 1185], "column": [0, 1102, 1108, 1115, 1162], "match_column": [0, 1183], "tsv": [0, 1107, 1116, 1126, 1131, 1151, 1162, 1174], "csv": [0, 1115, 1116, 1120, 1131], "train": 0, "en_ner_craft_md": 0, "x": [0, 2, 1117], "exclud": [0, 991, 1003, 1027, 1117, 1169], "token": [0, 991, 1003, 1027], "exclude_token": 0, "prior": [0, 2, 46, 73, 74, 75], "r": [0, 388, 405, 439, 1165, 1169, 1170, 1173, 1175, 1178], "rule": [0, 204, 275, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 405, 423, 478, 482, 490, 505, 511, 514, 523, 528, 532, 537, 542, 543, 547, 565, 598, 605, 667, 943, 948, 1037, 1062, 1063, 1069, 1095, 1104, 1107, 1129, 1183], "rules_fil": 0, "conform": [0, 10, 11, 12, 14, 15, 25, 46, 101, 102, 103, 105, 106, 112, 127, 141, 143, 145, 147, 148, 157, 165, 210, 211, 212, 217, 218, 223, 236, 258, 259, 260, 262, 263, 272, 281, 303, 304, 305, 307, 308, 321, 333, 381, 385, 389, 393, 394, 410, 439, 496, 497, 498, 500, 517, 518, 540, 615, 684, 685, 686, 689, 690, 701, 719, 751, 752, 753, 756, 757, 764, 782, 824, 825, 828, 832, 833, 838, 884, 929, 930, 931, 933, 934, 939, 955, 977, 978, 979, 982, 983, 988, 1003, 1035, 1036, 1038, 1040, 1041, 1054, 1063, 1069, 1101, 1106, 1107, 1108, 1109, 1112, 1116, 1120, 1131, 1133, 1138, 1181, 1183], "c": [0, 386, 390, 433, 439, 1115, 1119, 1121, 1128, 1131, 1169, 1178], "configur": [0, 94, 127, 130, 695, 698, 709, 711, 712, 718, 719, 720, 721, 722, 724, 733, 737, 739, 741, 991, 999, 1002, 1003, 1006, 1009, 1010, 1019, 1027, 1048, 1060, 1066, 1069, 1072, 1082, 1085, 1096, 1099, 1121, 1125, 1171, 1175, 1176, 1177, 1183, 1184, 1196], "configuration_fil": 0, "config": [0, 1122, 1150, 1179], "patch": [0, 1108, 1177], "kgcl": [0, 204, 1049, 1101, 1108, 1117, 1129, 1130, 1154, 1171, 1177], "com": [0, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 482, 490, 497, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 1102, 1108, 1125, 1126, 1136, 1137, 1140, 1152, 1159, 1161, 1166, 1186], "ttl": [0, 1112, 1169, 1185], "renam": [0, 695, 1162], "0000561": 0, "amacrin": 0, "neuron": [0, 1101, 1132, 1137, 1179, 1183], "simpleobo": [0, 1119, 1163, 1169, 1171], "edit": [0, 1108, 1125, 1138, 1169], "0005634": [0, 1169, 1174, 1175, 1183], "foo": [0, 1117, 1168], "new": [0, 4, 36, 42, 46, 50, 54, 55, 56, 82, 83, 323, 333, 357, 1103, 1108, 1119, 1122, 1125, 1130, 1138, 1162, 1165, 1169], "With": [0, 1119, 1120, 1121, 1129, 1130, 1138, 1147], "uri": [0, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 813, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1098, 1099, 1100, 1108, 1109, 1113, 1121, 1126, 1129, 1144, 1147, 1169, 1175], "purl": [0, 390, 391, 404, 439, 455, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 1110, 1112, 1115, 1121, 1131, 1169, 1185, 1195], "obolibrari": [0, 390, 391, 404, 439, 455, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 1110, 1112, 1115, 1121, 1131, 1135, 1137, 1169, 1185, 1195], "cl_0000561": 0, "still": [0, 1037, 1069, 1108, 1109, 1118, 1169, 1181, 1195], "experiment": [0, 1104, 1115, 1119, 1138, 1152, 1162, 1181, 1196], "thing": [0, 1, 3, 4, 17, 22, 30, 37, 41, 43, 46, 53, 61, 66, 67, 68, 76, 77, 79, 80, 84, 86, 87, 88, 89, 92, 165, 166, 214, 219, 229, 231, 233, 235, 236, 237, 243, 247, 248, 478, 482, 487, 490, 504, 505, 506, 510, 511, 514, 523, 524, 532, 535, 537, 542, 543, 547, 557, 561, 564, 583, 590, 593, 599, 607, 611, 615, 629, 632, 634, 637, 656, 657, 660, 670, 1102, 1108, 1110, 1111, 1112, 1119, 1142, 1162, 1169, 1171, 1172, 1174, 1178, 1179, 1181, 1184, 1185, 1195], "bear": 0, "mind": 0, "work": [0, 1, 2, 695, 719, 1104, 1106, 1107, 1108, 1111, 1115, 1118, 1119, 1122, 1129, 1130, 1132, 1133, 1134, 1137, 1142, 1156, 1162, 1189, 1195], "instead": [0, 413, 440, 1108, 1117, 1119, 1121, 1131, 1138, 1142, 1147, 1166, 1169, 1185], "surround": 0, "changes_output": 0, "changes_input": 0, "changes_format": 0, "json": [0, 2, 14, 15, 46, 105, 106, 127, 147, 148, 165, 217, 218, 236, 262, 263, 281, 307, 308, 333, 393, 394, 439, 517, 518, 615, 689, 690, 719, 756, 757, 782, 832, 833, 884, 933, 934, 955, 982, 983, 1003, 1040, 1041, 1069, 1108, 1121, 1125, 1138, 1145, 1147, 1156, 1161, 1185], "dry": 0, "kcgl": 0, "do": [0, 1, 204, 388, 767, 773, 1105, 1108, 1110, 1115, 1119, 1121, 1125, 1126, 1128, 1131, 1137, 1138, 1142, 1144, 1147, 1162, 1165, 1169, 1171, 1172, 1174, 1175, 1178, 1179, 1181, 1184, 1185], "complex": [0, 439, 450, 1119, 1139, 1165, 1177], "atom": [0, 266, 267, 281, 284, 285, 293, 294, 311, 312, 333, 343, 348, 369, 371, 679, 695, 719, 767, 773, 774, 775, 776, 779, 780, 782, 785, 795, 796, 797, 798, 801, 805, 806, 807, 808, 1177], "ignor": [0, 1169, 1177, 1185], "invalid": [0, 1177], "contributor": [0, 478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 615, 652, 818, 819, 866, 867, 883, 884, 897, 908, 1177], "person": [0, 31, 46, 225, 247, 1108, 1112], "contribut": [0, 382, 830, 842, 844, 848, 884, 1105, 1129], "overwrit": 0, "sourc": [0, 2, 46, 165, 171, 174, 180, 281, 333, 615, 719, 782, 955, 1003, 1069, 1101, 1102, 1104, 1113, 1126, 1131, 1135, 1144, 1146, 1147, 1148, 1150, 1152, 1153, 1155, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1196], "my": [0, 214, 1105, 1125, 1128, 1132, 1147, 1151, 1160, 1161, 1162], "0002200": 0, "modifi": [0, 30, 32, 33, 34, 36, 37, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 163, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 421, 422, 423, 424, 425, 426, 427, 428, 429, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 512, 513, 529, 551, 552, 553, 554, 555, 556, 557, 558, 559, 561, 562, 563, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 575, 577, 578, 579, 580, 581, 582, 584, 585, 586, 587, 588, 589, 590, 591, 593, 594, 595, 596, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 629, 637, 638, 639, 640, 646, 647, 648, 649, 650, 651, 654, 657, 659, 660, 661, 662, 663, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 706, 707, 708, 709, 710, 711, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 773, 774, 775, 776, 777, 778, 779, 780, 781, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 801, 802, 803, 804, 805, 806, 807, 808, 809, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 865, 866, 867, 868, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 881, 882, 883, 885, 887, 888, 889, 890, 891, 892, 894, 895, 896, 897, 898, 899, 900, 901, 903, 904, 905, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1049, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1110, 1144, 1162, 1168, 1171, 1184], "id": [0, 95, 121, 127, 142, 214, 219, 225, 232, 234, 235, 236, 241, 390, 398, 412, 414, 439, 482, 490, 501, 505, 514, 523, 524, 532, 535, 537, 542, 543, 547, 567, 598, 615, 641, 766, 782, 815, 818, 830, 837, 842, 844, 884, 941, 944, 955, 990, 993, 1003, 1013, 1030, 1037, 1043, 1045, 1062, 1069, 1095, 1109, 1112, 1115, 1117, 1118, 1119, 1120, 1121, 1131, 1132, 1137, 1147, 1160, 1166, 1169, 1174, 1195], "1": [0, 1, 3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 131, 142, 150, 155, 159, 214, 219, 225, 264, 266, 267, 271, 309, 311, 312, 313, 314, 318, 320, 323, 324, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 478, 481, 482, 487, 490, 491, 497, 504, 505, 507, 508, 510, 511, 514, 523, 524, 532, 535, 537, 539, 542, 543, 547, 679, 694, 695, 697, 698, 745, 766, 767, 768, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 938, 941, 942, 943, 944, 980, 990, 991, 993, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1057, 1060, 1062, 1104, 1108, 1115, 1117, 1118, 1120, 1122, 1129, 1130, 1153, 1161, 1170, 1179], "2": [0, 2, 142, 390, 398, 402, 412, 414, 415, 420, 438, 1115, 1117, 1118, 1119, 1122, 1129, 1130, 1131, 1153, 1169, 1174, 1179], "3": [0, 142, 1115, 1118, 1122, 1125, 1129, 1130, 1131, 1136, 1168, 1169, 1170], "chain": [0, 390, 405, 423, 439, 445, 453, 456, 1119, 1130, 1176], "them": [0, 391, 439, 1105, 1108, 1115, 1126, 1131, 1169, 1181, 1184], "redund": [0, 478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 943, 951, 955, 964, 1170, 1181], "more": [0, 1, 4, 14, 25, 42, 46, 49, 51, 95, 105, 112, 117, 123, 127, 142, 147, 157, 203, 204, 214, 217, 223, 229, 236, 262, 272, 307, 321, 383, 393, 410, 439, 450, 478, 482, 487, 490, 510, 511, 514, 517, 523, 532, 535, 537, 540, 542, 543, 547, 562, 689, 701, 744, 756, 764, 814, 832, 838, 933, 939, 943, 968, 982, 988, 1040, 1054, 1060, 1069, 1072, 1101, 1108, 1109, 1110, 1111, 1112, 1113, 1115, 1117, 1118, 1120, 1122, 1125, 1129, 1131, 1134, 1137, 1142, 1143, 1154, 1160, 1166, 1168, 1169, 1170, 1171, 1174, 1175, 1183, 1184, 1185, 1196], "test": [0, 323, 333, 334, 347, 356, 1101, 1103, 1104, 1112, 1118, 1119, 1121, 1122, 1134, 1137, 1143, 1145, 1147, 1156, 1158, 1161, 1165, 1169, 1170, 1171, 1174, 1175, 1183, 1185], "candid": [0, 943, 955, 1194], "form": [0, 14, 15, 105, 106, 147, 148, 155, 190, 217, 218, 262, 263, 275, 307, 308, 326, 390, 393, 394, 405, 423, 433, 434, 439, 478, 497, 507, 511, 514, 517, 518, 523, 543, 577, 689, 690, 756, 757, 832, 833, 933, 934, 982, 983, 995, 1040, 1041, 1102, 1108, 1109, 1110, 1112, 1118, 1120, 1125, 1131, 1138, 1169, 1171], "tripl": [0, 3, 17, 22, 38, 46, 53, 478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 844, 884, 907, 1108, 1116, 1119, 1133, 1165, 1166, 1169, 1195], "period": [0, 1121, 1147], "0005743": 0, "ncbitaxon": [0, 490, 511, 607, 942, 1133, 1142, 1168, 1169], "2759": [0, 1169], "never": [0, 941, 943, 955, 957, 963, 965, 1117, 1142], "evolut": 0, "arxiv": 0, "ab": 0, "1802": 0, "06004": 0, "0000229": 0, "gain": 0, "loss": 0, "eukaryota": [0, 1169], "eval": 0, "evo": 0, "blob": [0, 1140], "main": [0, 1, 399, 439, 1102, 1103, 1104, 1108, 1110, 1119, 1128, 1131, 1150, 1162, 1164, 1169, 1184], "notebook": [0, 1102, 1104, 1126, 1129], "ipynb": 0, "evolution_fil": 0, "contain": [0, 24, 46, 85, 396, 439, 697, 719, 730, 943, 967, 1108, 1109, 1111, 1118, 1119, 1121, 1131, 1133, 1147, 1162, 1175], "lookup": [0, 1104, 1108, 1120, 1131, 1132, 1134, 1139, 1142, 1154, 1167, 1169, 1174, 1185], "hp": [0, 1104, 1109, 1110, 1111, 1117, 1120, 1121, 1125, 1147, 1150, 1155, 1169, 1185], "hpoa": [0, 31, 46, 1110, 1120, 1168], "plu": [0, 214, 229, 230, 231, 233, 236, 239, 241, 242, 243, 244, 249, 941, 955, 970, 1108, 1131, 1135, 1169, 1185, 1189], "0001392": 0, "abnorm": [0, 1108, 1110, 1125, 1147, 1155, 1169], "liver": [0, 1125, 1155], "awkward": 0, "both": [0, 142, 439, 450, 719, 737, 1003, 1026, 1101, 1102, 1105, 1107, 1108, 1109, 1113, 1115, 1116, 1119, 1120, 1171, 1178, 1179, 1195], "bundl": [0, 483, 615, 1136, 1142], "combin": [0, 1, 9, 46, 100, 127, 140, 165, 209, 236, 257, 281, 302, 333, 380, 384, 439, 495, 615, 683, 719, 750, 782, 823, 884, 928, 941, 955, 970, 976, 1003, 1034, 1069, 1104, 1108, 1110, 1120, 1168, 1169, 1175, 1180, 1185, 1195], "togeth": [0, 391, 437, 439, 445, 450, 455, 1118, 1120, 1150, 1168, 1169], "dictybas": 0, "spec": [0, 1145, 1162, 1168, 1170], "src": [0, 1126, 1128, 1132, 1168, 1170], "conf": [0, 1168, 1170], "yaml": [0, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 326, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 399, 404, 405, 406, 407, 408, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 497, 499, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 520, 521, 522, 523, 524, 528, 529, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 678, 679, 687, 694, 695, 696, 697, 698, 700, 706, 707, 708, 709, 710, 711, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 763, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 881, 882, 883, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 924, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 995, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1053, 1057, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1115, 1116, 1125, 1126, 1131, 1138, 1168, 1170, 1185], "0008104": 0, "autolabel": [0, 1160, 1170], "assign": [0, 1108, 1131, 1169], "absent": [0, 1150], "if_abs": 0, "when": [0, 1, 2, 14, 15, 21, 25, 30, 45, 46, 78, 79, 105, 106, 112, 147, 148, 157, 215, 217, 218, 223, 262, 263, 272, 307, 308, 321, 384, 386, 393, 394, 410, 439, 478, 482, 490, 508, 511, 514, 517, 518, 523, 532, 535, 537, 540, 542, 543, 547, 568, 574, 615, 689, 690, 695, 701, 719, 739, 756, 757, 764, 767, 773, 832, 833, 838, 933, 934, 939, 982, 983, 988, 1040, 1041, 1054, 1101, 1108, 1109, 1111, 1115, 1117, 1118, 1119, 1120, 1128, 1131, 1147, 1156, 1161, 1163, 1168, 1169, 1195], "empti": [0, 1168, 1169, 1174], "set_valu": 0, "field": [0, 1, 4, 46, 91, 111, 127, 219, 225, 232, 697, 700, 719, 725, 729, 740, 1101, 1110, 1131, 1168, 1170, 1174], "association_pred": 0, "role": [0, 382, 413, 419, 818, 883, 884, 1169], "terms_rol": 0, "how": [0, 155, 165, 695, 697, 700, 709, 711, 712, 718, 719, 720, 721, 722, 724, 733, 737, 739, 740, 741, 1105, 1108, 1111, 1113, 1115, 1129, 1130, 1131, 1132, 1133, 1138, 1143, 1175, 1185, 1195], "interpret": [0, 396, 439, 695, 700, 719, 741, 1108, 1161], "object": [0, 3, 4, 14, 15, 17, 19, 20, 22, 23, 24, 25, 27, 30, 31, 33, 34, 36, 37, 38, 41, 42, 43, 44, 46, 47, 48, 49, 50, 51, 53, 54, 55, 56, 57, 58, 59, 60, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 76, 77, 79, 80, 81, 82, 83, 84, 86, 87, 88, 89, 90, 91, 92, 105, 106, 109, 112, 114, 127, 142, 147, 148, 150, 153, 155, 157, 160, 165, 166, 167, 168, 169, 170, 171, 175, 182, 184, 187, 188, 189, 190, 193, 217, 218, 222, 223, 226, 236, 262, 263, 270, 272, 274, 281, 307, 308, 313, 317, 321, 325, 333, 346, 375, 382, 386, 388, 393, 394, 401, 406, 407, 410, 413, 416, 419, 435, 439, 449, 450, 474, 478, 481, 482, 487, 490, 505, 511, 512, 513, 514, 517, 518, 523, 524, 529, 532, 533, 537, 538, 540, 542, 543, 546, 547, 552, 555, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 582, 584, 585, 586, 588, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 618, 619, 622, 623, 625, 626, 627, 637, 648, 649, 650, 651, 654, 657, 659, 660, 665, 666, 667, 668, 670, 689, 690, 693, 697, 701, 703, 719, 731, 745, 756, 757, 762, 764, 767, 769, 774, 782, 787, 796, 832, 833, 836, 838, 840, 843, 844, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 865, 868, 870, 871, 872, 874, 875, 876, 878, 879, 883, 884, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 899, 900, 901, 905, 907, 910, 911, 913, 914, 917, 918, 922, 933, 934, 937, 939, 943, 945, 955, 968, 982, 983, 986, 988, 994, 1003, 1037, 1040, 1041, 1045, 1047, 1051, 1054, 1056, 1061, 1062, 1063, 1069, 1084, 1101, 1108, 1110, 1112, 1119, 1126, 1128, 1132, 1134, 1137, 1138, 1142, 1144, 1147, 1156, 1160, 1168, 1169, 1170, 1171, 1174, 1175, 1176, 1177, 1178, 1180], "subject": [0, 3, 4, 17, 20, 22, 23, 30, 31, 33, 37, 38, 41, 43, 46, 53, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 74, 75, 76, 77, 79, 80, 81, 84, 87, 88, 89, 90, 92, 142, 150, 155, 165, 166, 167, 175, 177, 178, 179, 180, 183, 184, 190, 193, 195, 196, 197, 200, 201, 214, 230, 313, 333, 346, 386, 439, 464, 478, 482, 487, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 554, 565, 605, 667, 745, 767, 782, 787, 806, 844, 884, 891, 941, 943, 952, 954, 955, 956, 957, 958, 960, 961, 962, 970, 980, 990, 1003, 1021, 1037, 1045, 1062, 1069, 1071, 1079, 1108, 1110, 1112, 1119, 1120, 1126, 1137, 1142, 1160, 1168, 1169, 1170, 1174, 1175, 1176, 1178, 1180], "group": [0, 4, 24, 38, 44, 46, 85, 91, 251, 264, 265, 281, 289, 292, 296, 309, 310, 333, 358, 366, 374, 384, 407, 421, 431, 439, 442, 445, 452, 453, 459, 474, 475, 477, 478, 482, 483, 487, 490, 508, 511, 512, 513, 514, 523, 529, 532, 537, 542, 543, 547, 552, 557, 559, 561, 562, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 584, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 622, 625, 627, 637, 643, 648, 649, 654, 657, 659, 660, 666, 667, 668, 670, 763, 782, 817, 827, 830, 844, 858, 859, 876, 878, 884, 889, 890, 891, 903, 914, 942, 954, 955, 956, 1108, 1110, 1111, 1115, 1128, 1131, 1171, 1175, 1182], "summarz": 0, "hpo": [0, 1110, 1117, 1120, 1121, 1168, 1169], "number": [0, 10, 11, 12, 46, 95, 101, 102, 103, 127, 134, 135, 141, 143, 145, 165, 210, 211, 212, 236, 258, 259, 260, 281, 303, 304, 305, 333, 381, 385, 389, 439, 496, 498, 500, 615, 684, 685, 686, 695, 697, 719, 724, 734, 751, 752, 753, 767, 782, 785, 817, 824, 825, 827, 828, 844, 849, 850, 851, 857, 858, 859, 862, 863, 870, 871, 872, 875, 876, 878, 879, 884, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 900, 901, 905, 907, 910, 911, 913, 914, 917, 918, 929, 930, 931, 955, 977, 978, 979, 991, 1003, 1006, 1035, 1036, 1038, 1060, 1069, 1072, 1102, 1104, 1108, 1110, 1111, 1115, 1119, 1120, 1125, 1131, 1133, 1134, 1138, 1142, 1145, 1168, 1171, 1195], "direct": [0, 127, 142, 1108, 1113, 1125, 1131, 1137, 1170, 1175, 1178], "diseas": [0, 31, 46, 1108, 1110, 1170], "special": [0, 4, 36, 142, 439, 450, 700, 1108, 1115, 1117, 1131, 1139, 1142, 1158, 1166, 1169, 1184, 1195], "particular": [0, 1, 2, 27, 46, 114, 127, 160, 165, 214, 226, 229, 236, 274, 281, 325, 333, 416, 439, 546, 615, 695, 703, 709, 711, 712, 718, 719, 720, 721, 722, 724, 733, 739, 741, 769, 782, 817, 830, 843, 881, 882, 884, 903, 945, 955, 994, 1003, 1056, 1060, 1062, 1069, 1096, 1101, 1104, 1108, 1109, 1112, 1115, 1120, 1121, 1131, 1132, 1139, 1142, 1166, 1169, 1174, 1185], "databas": [0, 375, 396, 407, 413, 419, 420, 477, 1101, 1104, 1107, 1108, 1119, 1120, 1126, 1131, 1137, 1139, 1142, 1143, 1154, 1167, 1173, 1185], "iea": 0, "amigo": [0, 1168], "limit": [0, 396, 426, 439, 450, 695, 719, 991, 1003, 1104, 1108, 1110, 1115, 1131, 1134, 1162, 1166, 1168, 1169], "f": [0, 386, 439, 1109, 1112, 1119, 1128, 1132, 1139, 1143, 1161, 1168, 1169, 1170, 1175], "evidence_typ": [0, 3, 17, 22, 46], "speci": [0, 46, 127, 165, 236, 281, 333, 439, 615, 719, 782, 884, 942, 943, 954, 955, 956, 968, 1003, 1069, 1109, 1160], "9606": [0, 511, 1160], "accept": [0, 1, 1102, 1137, 1142, 1196], "detail": [0, 1, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 326, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 399, 404, 405, 406, 407, 408, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 497, 499, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 520, 521, 522, 523, 524, 528, 529, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 678, 679, 687, 694, 695, 696, 697, 698, 700, 706, 707, 708, 709, 710, 711, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 763, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 881, 882, 883, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 924, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 995, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1053, 1057, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1101, 1108, 1110, 1111, 1112, 1114, 1120, 1125, 1131, 1137, 1165, 1168, 1173, 1175, 1184], "10": [0, 142, 1104, 1168], "k": 0, "min": 0, "facet": [0, 817, 826, 827, 844, 858, 859, 876, 878, 882, 884, 889, 890, 891, 914], "min_facet_count": 0, "minimum": [0, 131, 507, 577, 615, 627, 1063, 1131, 1180], "group_bi": [0, 1168, 1182], "co": [0, 20, 33, 46, 57, 58, 59, 60, 62, 63, 64, 65, 81, 90, 1168], "wood": 0, "carbon": 0, "et": [0, 1109, 1120], "al": [0, 1109, 1120], "royalsocietypublish": 0, "doi": [0, 1104, 1110], "1098": 0, "rsob": 0, "200149": 0, "0042416": 0, "0014046": 0, "As": [0, 1138, 1175, 1179], "heatmap": 0, "tmp": 0, "png": [0, 318, 373, 1135], "gene": [0, 31, 46, 120, 127, 214, 225, 236, 238, 247, 1108, 1109, 1110, 1115, 1117, 1120, 1125, 1160, 1168, 1170], "otherwis": [0, 1132, 1147], "ofn": 0, "write": [0, 1104, 1107, 1111, 1122, 1125, 1129, 1132, 1133, 1137, 1138, 1143, 1172, 1173, 1184], "funowl": [0, 204, 1104, 1108, 1129, 1136, 1142, 1159, 1161, 1163, 1165, 1176], "axiom_typ": 0, "about": [0, 1, 3, 4, 17, 22, 37, 41, 46, 80, 86, 89, 374, 375, 382, 383, 384, 386, 387, 390, 391, 395, 396, 398, 405, 407, 413, 419, 426, 439, 440, 442, 445, 452, 467, 474, 475, 477, 943, 955, 968, 1037, 1062, 1069, 1070, 1079, 1088, 1101, 1108, 1109, 1110, 1117, 1119, 1130, 1132, 1133, 1135, 1142, 1154, 1169, 1173, 1174, 1176], "refer": [0, 1, 28, 115, 144, 161, 165, 227, 276, 327, 375, 396, 407, 413, 417, 419, 420, 439, 442, 445, 452, 474, 475, 477, 549, 704, 770, 845, 946, 996, 1058, 1108, 1111, 1112, 1113, 1117, 1121, 1128, 1129, 1135, 1147, 1175, 1176, 1185], "pystow": [0, 1107, 1137], "dai": [0, 7, 27, 46, 98, 114, 127, 138, 160, 165, 207, 226, 236, 255, 274, 281, 300, 325, 333, 378, 416, 439, 493, 546, 615, 681, 703, 719, 748, 769, 782, 821, 843, 884, 926, 945, 955, 974, 994, 1003, 1032, 1056, 1069], "old": [0, 4, 36, 42, 46, 50, 69, 70, 71, 72, 82, 83, 1107], "days_old": 0, "anyth": [0, 2, 524, 528, 534, 610, 615, 670, 696, 1101, 1137, 1195, 1196], "than": [0, 2, 95, 117, 123, 127, 408, 478, 482, 487, 490, 510, 511, 514, 523, 532, 535, 537, 542, 543, 547, 562, 943, 948, 955, 1060, 1063, 1069, 1072, 1108, 1109, 1110, 1111, 1113, 1117, 1131, 1138, 1143, 1160, 1169, 1170], "100": 0, "todo": [0, 2, 478, 482, 487, 490, 491, 505, 508, 509, 510, 511, 514, 523, 532, 537, 538, 539, 542, 543, 547, 642, 767, 943, 1123, 1124, 1125, 1126, 1134, 1135, 1136, 1159, 1184, 1185], "unix": [0, 1111], "system": [0, 1, 1108, 1109, 1110, 1111, 1115, 1119, 1121, 1125, 1128, 1137, 1147, 1169], "textual": [0, 382, 413, 419, 439, 442, 445, 452, 474, 475, 477, 1003, 1026, 1111, 1115, 1120, 1125, 1183, 1195], "tropic": 0, "biom": 0, "temper": 0, "d": [0, 386, 390, 433, 439, 442, 445, 452, 474, 475, 477, 1101, 1115, 1131, 1137], "displai": [0, 1104, 1106, 1109, 1131, 1147], "obojson": [0, 1], "fhirjson": [0, 1121, 1147], "nl": [0, 1169], "statement": [0, 487, 553, 554, 555, 556, 562, 569, 573, 575, 589, 596, 599, 602, 609, 615, 620, 621, 624, 627, 639, 657, 662, 673, 844, 884, 913, 914, 943, 953, 955, 1108, 1154, 1165, 1169], "store": [0, 1104, 1108, 1112, 1131, 1133, 1134, 1151, 1168, 1169], "reific": 0, "assai": [0, 1137, 1139, 1162], "heart": [0, 1108, 1109, 1112, 1118], "invers": [0, 478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 1120], "But": [0, 384, 1104, 1108, 1115, 1119, 1120, 1128, 1142, 1195], "potenti": [0, 384, 421, 431, 439, 445, 453, 459, 509, 1108, 1117, 1119, 1143, 1169, 1195], "explos": 0, "especi": [0, 1119], "high": [0, 1108, 1131, 1138, 1142, 1161, 1171], "level": [0, 4, 49, 51, 407, 942, 954, 955, 956, 1108, 1109, 1116, 1128, 1134, 1138, 1142, 1165, 1169, 1171, 1195], "comput": [0, 830, 842, 844, 884, 899, 1108, 1113, 1115, 1119, 1128, 1129, 1131, 1134, 1180], "bar": 0, "produc": [0, 1106, 1143], "html": [0, 390, 398, 402, 412, 414, 415, 420, 438, 1108, 1121, 1125, 1147, 1195], "control": [0, 214, 230, 236, 275, 281, 326, 333, 995, 1003, 1111, 1131, 1169, 1171, 1172, 1174, 1178, 1179, 1181, 1184], "natur": [0, 1106, 1110, 1125], "txt": [0, 1160], "summari": [0, 4, 46, 91, 204, 826, 829, 830, 840, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 865, 868, 870, 871, 872, 874, 875, 876, 877, 878, 879, 883, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 899, 900, 901, 903, 905, 907, 909, 910, 911, 913, 914, 917, 918, 921, 922, 1125, 1129, 1167, 1171, 1173], "accord": [0, 1115, 1125, 1175], "oio": [0, 375, 396, 407, 408, 412, 413, 414, 419, 466, 477, 478, 482, 487, 490, 504, 505, 506, 508, 509, 511, 514, 523, 532, 535, 537, 542, 543, 547, 565, 569, 570, 573, 575, 589, 596, 598, 600, 602, 603, 604, 608, 609, 614, 622, 623, 624, 625, 626, 639, 641, 642, 659, 662, 664, 673, 1106, 1109, 1112, 1116, 1117, 1169], "hasobonamespac": [0, 478, 482, 490, 504, 511, 514, 523, 532, 537, 542, 543, 547, 604, 1117], "partit": [0, 1, 830, 844, 884, 1182], "dictionari": [0, 275, 326, 995, 1134, 1146, 1169, 1171, 1182], "outer": 0, "kei": [0, 3, 17, 22, 46, 80, 214, 219, 232, 236, 241, 264, 265, 267, 280, 281, 282, 284, 287, 292, 309, 310, 312, 332, 333, 335, 343, 350, 366, 404, 407, 439, 442, 445, 452, 454, 474, 475, 477, 817, 819, 826, 827, 829, 852, 853, 854, 855, 866, 1057, 1069, 1086, 1095, 1105, 1131, 1144, 1154, 1169, 1171, 1175, 1178, 1182, 1186], "inner": 0, "__residual__": 0, "tabular": [0, 1115], "out": [0, 1, 829, 830, 903, 1104, 1105, 1117, 1118, 1125, 1132, 1134, 1138, 1150, 1169, 1170], "doe": [0, 1, 396, 422, 439, 697, 719, 725, 1105, 1106, 1107, 1108, 1115, 1119, 1120, 1126, 1128, 1131, 1134, 1139, 1162], "complet": [0, 1, 28, 46, 115, 127, 161, 165, 227, 236, 276, 281, 327, 333, 417, 439, 549, 615, 704, 719, 770, 782, 845, 884, 946, 955, 996, 1003, 1058, 1069, 1104, 1119, 1167, 1169], "robot": [0, 2, 1104, 1115, 1128, 1130, 1137, 1154, 1161, 1167, 1169, 1176], "other_ontologi": [0, 1171], "quick": [0, 1104, 1113, 1131], "change_typ": 0, "classcreat": 0, "edgedelet": 0, "group_by_properti": 0, "isdefinedbi": [0, 478, 482, 490, 508, 511, 514, 521, 523, 532, 535, 537, 542, 543, 547, 615, 1169], "namespac": [0, 390, 391, 404, 439, 455, 1101, 1128], "defin": [0, 1, 214, 229, 383, 390, 395, 424, 425, 427, 432, 436, 439, 444, 445, 456, 462, 472, 473, 943, 959, 1110, 1111, 1115, 1119, 1120, 1139, 1168, 1169, 1175, 1183], "infer": [0, 4, 42, 46, 49, 51, 943, 948, 955, 969, 971, 1108, 1115, 1119, 1131, 1160, 1165, 1169, 1182, 1185], "explicitli": [0, 2, 695, 718, 1131, 1165, 1168, 1169], "sh": [0, 313, 352, 390, 391, 404, 446, 454, 455, 818, 837, 904, 1037, 1050, 1051, 1053, 1061, 1062, 1063, 1070, 1071, 1075, 1079, 1084, 1086, 1088, 1095], "gaf": [0, 31, 46, 1110, 1168], "date": [0, 4, 8, 9, 39, 42, 46, 52, 54, 69, 99, 100, 127, 139, 140, 165, 208, 209, 236, 256, 257, 281, 301, 302, 333, 379, 380, 439, 478, 482, 490, 494, 495, 508, 511, 514, 523, 532, 537, 542, 543, 547, 615, 652, 682, 683, 719, 749, 750, 782, 822, 823, 884, 927, 928, 955, 975, 976, 1003, 1033, 1034, 1069, 1105], "date1": 0, "date2": 0, "download_dir": 0, "public": [0, 3, 4, 17, 22, 42, 46, 82, 83, 382, 1110], "move": [0, 337, 1176], "old_dat": [0, 4, 40, 42, 46], "yyyi": 0, "mm": 0, "dd": 0, "new_dat": [0, 4, 40, 42, 46], "other_associ": 0, "One": [0, 150, 1109, 1119, 1131, 1162, 1170, 1185], "primary_knowledge_sourc": [0, 3, 4, 17, 21, 22, 46, 1185], "compar": [0, 767, 773, 782, 795, 805, 830, 842, 844, 865, 884, 1109, 1113, 1119, 1171], "calcul": [0, 841, 847, 877, 884, 909, 921, 1101, 1104, 1108, 1120, 1167, 1168, 1169, 1173, 1174, 1180], "cross": [0, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 204, 375, 396, 407, 413, 419, 420, 439, 477, 1113, 1115, 1129], "connect": [0, 1, 164, 165, 439, 450, 512, 513, 529, 532, 538, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 582, 584, 585, 586, 588, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 618, 619, 622, 623, 625, 626, 627, 637, 648, 649, 651, 654, 657, 659, 660, 665, 666, 667, 668, 670, 943, 955, 960, 1108, 1109, 1115, 1116, 1130, 1151, 1154, 1157, 1165, 1168, 1169, 1178, 1181], "comparison": [0, 275, 326, 995], "zfa": [0, 1116], "distribut": [0, 1116, 1126, 1168], "within": [0, 14, 15, 24, 25, 46, 85, 105, 106, 112, 147, 148, 155, 157, 165, 166, 169, 175, 178, 217, 218, 223, 262, 263, 272, 307, 308, 321, 393, 394, 410, 478, 487, 507, 511, 514, 517, 518, 523, 540, 543, 627, 689, 690, 701, 756, 757, 764, 832, 833, 838, 933, 934, 939, 943, 955, 963, 982, 983, 988, 1040, 1041, 1054, 1101, 1108, 1109, 1115, 1117, 1125, 1126, 1132, 1166, 1168, 1185, 1195], "provid": [0, 1, 203, 204, 396, 420, 439, 450, 519, 525, 615, 695, 719, 737, 739, 819, 884, 897, 1101, 1102, 1104, 1106, 1108, 1109, 1110, 1111, 1112, 1113, 1115, 1116, 1118, 1120, 1125, 1128, 1131, 1134, 1135, 1138, 1139, 1142, 1143, 1151, 1157, 1158, 1160, 1162, 1165, 1167, 1169, 1170, 1171, 1173, 1175, 1177, 1178, 1179, 1181, 1182, 1183, 1184, 1195], "extern": [0, 214, 229, 382, 419, 439, 442, 445, 452, 474, 475, 477, 844, 884, 889, 891, 1037, 1067, 1069, 1070, 1071, 1074, 1075, 1078, 1079, 1086, 1087, 1088, 1094, 1095, 1098, 1101, 1131, 1138], "ont1": [0, 1171], "ont2": [0, 1171], "sssom": [0, 3, 17, 22, 68, 77, 89, 150, 204, 319, 333, 339, 344, 345, 355, 362, 363, 370, 697, 727, 728, 729, 730, 731, 767, 795, 797, 798, 805, 807, 808, 980, 990, 1000, 1003, 1007, 1013, 1014, 1015, 1017, 1022, 1026, 1101, 1107, 1108, 1113, 1118, 1129, 1151, 1174, 1195], "exist": [0, 2, 374, 383, 388, 390, 398, 412, 414, 439, 443, 1109, 1115, 1117, 1119, 1120, 1122, 1128, 1134, 1138, 1155, 1169], "serial": [0, 6, 28, 97, 115, 137, 161, 206, 227, 254, 267, 276, 281, 284, 293, 299, 312, 327, 333, 343, 369, 377, 417, 492, 549, 680, 704, 747, 770, 820, 845, 925, 946, 973, 996, 1031, 1058, 1104, 1108, 1111, 1121, 1147, 1185], "mp": [0, 1120, 1150], "mapping_input": 0, "other_input": 0, "other_input_typ": 0, "intra": 0, "ident": [0, 142, 155, 190, 390, 398, 412, 414, 443, 1108, 1119], "report": [0, 95, 117, 123, 127, 204, 826, 829, 830, 840, 842, 844, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 865, 868, 870, 871, 872, 874, 875, 876, 878, 879, 883, 884, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 899, 900, 901, 905, 907, 910, 911, 912, 913, 914, 917, 918, 922, 1050, 1052, 1060, 1061, 1069, 1072, 1082, 1084, 1085, 1096, 1129], "ha": [0, 1, 4, 50, 71, 391, 407, 439, 509, 512, 513, 523, 529, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 627, 637, 648, 649, 657, 660, 666, 667, 668, 670, 1101, 1104, 1108, 1109, 1111, 1112, 1115, 1119, 1120, 1121, 1131, 1133, 1137, 1143, 1147, 1158, 1166, 1169, 1173, 1185], "bidirect": 0, "left": [0, 142, 155, 159, 165, 167, 168, 170, 171, 172, 173, 174, 175, 176, 177, 179, 180, 181, 184, 198, 199, 1115], "right": [0, 142, 155, 159, 165, 167, 181, 184, 187, 188, 189, 190, 193, 194, 195, 196, 197, 198, 199, 1109, 1115, 1131], "perspect": [0, 142, 155, 165, 204, 1117, 1174], "leav": [0, 21, 78, 1109, 1119, 1131, 1174, 1175], "off": [0, 1104, 1156], "pairwis": [0, 763, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 782, 785, 793, 794, 795, 796, 797, 798, 799, 801, 804, 805, 806, 807, 808, 809, 1108, 1120, 1180], "setwis": 0, "union": [0, 383, 439, 473, 695, 739, 767, 782, 785, 1102, 1196], "involv": [0, 1104, 1105, 1108, 1119, 1138, 1142, 1168, 1169, 1194], "express": [0, 155, 163, 165, 168, 169, 170, 172, 173, 177, 178, 179, 182, 183, 186, 187, 188, 190, 191, 195, 196, 200, 201, 203, 383, 388, 424, 425, 430, 435, 439, 445, 457, 472, 473, 484, 491, 538, 615, 700, 844, 850, 884, 1063, 1106, 1108, 1115, 1120, 1131, 1132, 1138, 1139, 1168, 1169, 1175, 1176, 1179, 1184], "easier": [0, 1107], "brows": 0, "desc": [0, 1102, 1115, 1120, 1125, 1155], "immun": [0, 1139], "export": [0, 1121, 1131, 1138, 1147, 1172], "pato": [0, 1119, 1137, 1185], "turtl": [0, 1108, 1111, 1117, 1133, 1185, 1195], "parameter": [0, 695, 719, 737, 739, 1108, 1195], "process": [0, 830, 842, 844, 884, 922, 991, 1003, 1027, 1104, 1108, 1117, 1125, 1139, 1166, 1175], "convert": [0, 384, 396, 426, 1104, 1107, 1118, 1121, 1129, 1143, 1144, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1167, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "fhir": [0, 1111, 1122, 1129, 1145, 1148], "fhir_config": 0, "block": [0, 1125, 1143], "remot": [0, 1104, 1108, 1125, 1132, 1133, 1139, 1143, 1164, 1165, 1166, 1175, 1183, 1185, 1194], "avoid": [0, 2, 1101, 1131, 1137, 1142, 1166], "killer": 0, "config_fil": 0, "param": [0, 252, 266, 281, 297, 311, 333, 1147, 1169, 1175, 1177, 1185], "enforc": [0, 1104, 1107, 1144], "canon": [0, 1120, 1144, 1147], "order": [0, 214, 216, 236, 244, 275, 326, 995, 1101, 1102, 1144, 1168], "forc": [0, 695, 712, 719, 1137], "dif": 0, "analysi": [0, 1122, 1155], "sampl": [0, 95, 127, 134, 135, 1108, 1119, 1162, 1170], "identifi": [0, 236, 439, 615, 1102, 1108, 1110, 1111, 1113, 1117, 1118, 1129, 1168, 1169, 1175, 1179, 1195], "return": [0, 695, 719, 724, 991, 1003, 1006, 1109, 1112, 1115, 1116, 1117, 1118, 1119, 1131, 1134, 1142, 1143, 1144, 1146, 1147, 1148, 1151, 1162, 1165, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1196], "repres": [0, 1, 18, 19, 27, 31, 46, 108, 109, 114, 120, 127, 144, 152, 153, 160, 164, 165, 204, 214, 219, 221, 222, 226, 236, 237, 238, 239, 241, 250, 269, 270, 274, 281, 282, 283, 316, 317, 325, 333, 335, 336, 375, 382, 384, 386, 387, 390, 391, 396, 400, 401, 402, 405, 407, 408, 413, 415, 416, 419, 420, 421, 423, 432, 433, 434, 438, 439, 440, 442, 443, 444, 445, 448, 450, 452, 453, 455, 456, 460, 465, 467, 468, 474, 475, 477, 527, 533, 546, 615, 692, 693, 703, 719, 737, 744, 760, 762, 763, 769, 782, 814, 835, 836, 843, 884, 936, 937, 938, 942, 945, 954, 955, 956, 969, 985, 986, 994, 1003, 1026, 1046, 1047, 1056, 1069, 1108, 1110, 1111, 1113, 1115, 1116, 1135, 1145, 1165, 1168, 1169, 1195], "gene2anat": 0, "g2t": 0, "u": [0, 1108, 1119, 1160], "recommend": [0, 214, 395, 404, 436, 454, 462, 482, 490, 532, 537, 542, 547, 697, 728, 1037, 1062, 1095, 1104, 1107, 1115, 1125, 1126, 1128, 1131, 1168, 1170, 1177, 1184, 1195], "alwai": [0, 1, 395, 462, 1107, 1108, 1128, 1131, 1168], "background": [0, 95, 118, 119, 127, 1113, 1119, 1170], "consid": [0, 2, 390, 398, 412, 414, 443, 478, 482, 486, 490, 501, 505, 511, 514, 523, 532, 534, 537, 542, 543, 547, 615, 643, 1115, 1117, 1143, 1161, 1168, 1169, 1180, 1181, 1182, 1195], "experi": [0, 1111], "subsum": [0, 943, 955, 965, 1178], "lower": [0, 1119], "alreadi": [0, 1120, 1131, 1151], "pseudo": 0, "fake": 0, "simpli": [0, 1111, 1118, 1138, 1174], "reflex": [0, 155, 165, 1108, 1119, 1120, 1175], "itself": [0, 1, 407, 1108, 1111, 1119, 1162], "summar": [0, 1115, 1125], "meaning": [0, 1119, 1131], "treat": [0, 28, 115, 161, 227, 276, 327, 417, 549, 695, 704, 739, 770, 845, 946, 996, 1058, 1102, 1108, 1109, 1110, 1117, 1120, 1133, 1137, 1147, 1168, 1182, 1195], "cutoff": [0, 94, 127, 130, 1170], "greater": [0, 1063, 1170], "05": [0, 1168, 1170], "sample_fil": 0, "b": [0, 386, 388, 390, 433, 439, 719, 737, 1119, 1120, 1126, 1131, 1165], "background_fil": 0, "allow": [0, 1, 413, 439, 467, 695, 719, 722, 1060, 1063, 1069, 1082, 1085, 1096, 1102, 1108, 1109, 1116, 1118, 1125, 1128, 1131, 1134, 1135, 1138, 1150, 1158, 1179, 1185], "well": [0, 1, 2, 31, 46, 390, 407, 439, 448, 1102, 1108, 1110, 1111, 1112, 1131, 1134, 1142, 1169, 1176, 1179], "attribute_slim": 0, "value_slim": 0, "sub": [0, 24, 44, 386, 439, 829, 844, 884, 1119, 1151, 1153, 1165], "singl": [0, 1, 95, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 131, 132, 134, 135, 390, 391, 395, 396, 426, 436, 439, 497, 1110, 1118, 1138, 1165, 1169, 1174, 1182, 1184, 1195], "node": [0, 18, 28, 46, 108, 115, 127, 142, 152, 161, 165, 181, 199, 221, 227, 236, 269, 276, 281, 316, 323, 327, 333, 374, 375, 382, 383, 384, 386, 387, 390, 391, 395, 396, 399, 400, 405, 406, 407, 408, 412, 413, 414, 417, 419, 421, 432, 433, 434, 438, 439, 443, 444, 445, 447, 449, 450, 452, 455, 456, 458, 460, 464, 465, 468, 470, 527, 549, 615, 692, 704, 719, 760, 767, 770, 779, 782, 835, 845, 884, 936, 946, 955, 985, 996, 1003, 1037, 1043, 1046, 1058, 1062, 1068, 1069, 1071, 1075, 1079, 1088, 1108, 1109, 1117, 1119, 1120, 1134, 1147, 1168, 1169, 1173, 1175, 1195], "No": [0, 1104, 1105, 1119, 1131, 1169], "dangl": [0, 1, 1169, 1173, 1175], "edg": [0, 142, 155, 163, 165, 167, 168, 169, 170, 171, 172, 173, 174, 175, 177, 178, 179, 180, 181, 182, 183, 184, 186, 187, 188, 189, 190, 191, 193, 195, 196, 197, 199, 200, 201, 374, 375, 382, 383, 384, 387, 388, 390, 391, 395, 396, 398, 405, 407, 413, 414, 419, 421, 422, 426, 428, 429, 432, 434, 438, 439, 443, 444, 445, 448, 449, 450, 452, 455, 456, 464, 465, 466, 468, 469, 476, 477, 827, 844, 876, 878, 884, 1108, 1110, 1113, 1120, 1134, 1138, 1147, 1154, 1165, 1169, 1173, 1175, 1177, 1181, 1182], "even": [0, 1, 2, 1109, 1111, 1118, 1119, 1131, 1142, 1143, 1169, 1195], "wish": [0, 214, 215, 230, 1115, 1117, 1125, 1137, 1184], "fulli": [0, 1104, 1108, 1117, 1131, 1195, 1196], "anc": [0, 1102, 1119], "split": 0, "seed": [0, 1175, 1181], "Then": [0, 1119, 1125, 1128, 1131, 1132, 1135, 1137, 1161, 1181], "idfil": [0, 1120], "miss": [0, 142, 155, 165, 1115, 1119, 1126, 1151, 1169, 1184], "util": [0, 1108, 1129, 1143, 1145, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1167, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "table_fil": [0, 1167], "popul": [0, 1, 1115, 1121, 1147, 1169, 1174], "unpopul": 0, "row": [0, 1115], "revers": 0, "blank": [0, 1108, 1169], "scenario": [0, 1, 1169], "convent": [0, 3, 4, 17, 22, 23, 61, 86, 497, 1104, 1111, 1113, 1118, 1121, 1195], "header": 0, "later": [0, 2, 1119, 1120, 1131, 1168], "don": [0, 1, 2, 204, 1102, 1105, 1110, 1119, 1121, 1128, 1131, 1137, 1142, 1151, 1165, 1195], "By": [0, 1107, 1115, 1118, 1169, 1170], "throw": [0, 1175], "success": [0, 1049, 1069, 1131, 1177], "relax": [0, 420, 1169], "cannot": [0, 155, 165, 478, 482, 487, 490, 510, 511, 514, 523, 532, 535, 537, 542, 543, 547, 562, 1134, 1169], "remain": 0, "no_data": 0, "recogn": [0, 1109, 1128, 1183], "uniqu": [0, 1, 2, 155, 165, 166, 169, 175, 178, 219, 225, 232, 390, 398, 412, 414, 438, 439, 478, 487, 507, 511, 514, 523, 543, 627, 815, 818, 830, 837, 842, 844, 884, 1108, 1111, 1112, 1128, 1131, 1169], "procedur": 0, "denorm": [0, 41, 46, 1110], "foo_id": 0, "foo_nam": 0, "implicit": [0, 1110, 1185, 1196], "wai": [0, 1, 1101, 1104, 1106, 1108, 1109, 1110, 1111, 1112, 1115, 1116, 1117, 1118, 1120, 1121, 1125, 1126, 1128, 1131, 1135, 1137, 1143, 1165, 1166, 1168, 1170, 1179, 1184, 1185, 1195], "linkml": [0, 2, 8, 99, 139, 154, 171, 174, 180, 189, 192, 197, 202, 208, 256, 283, 295, 301, 335, 336, 337, 372, 379, 471, 494, 671, 682, 714, 715, 716, 717, 723, 743, 749, 812, 822, 852, 853, 854, 855, 860, 861, 880, 916, 927, 975, 1028, 1029, 1031, 1032, 1033, 1034, 1035, 1036, 1038, 1039, 1040, 1041, 1044, 1046, 1047, 1054, 1055, 1056, 1058, 1059, 1069, 1097, 1100, 1115, 1125, 1126, 1184], "first": [0, 2, 165, 175, 767, 782, 805, 807, 808, 1102, 1108, 1110, 1118, 1120, 1128, 1130, 1131, 1134, 1135, 1151, 1171, 1181], "cl_identifi": 0, "cl_display_label": 0, "sai": 0, "primary_kei": 0, "dependent_column": 0, "2nd": [0, 1119], "schema": [0, 1, 2, 204, 236, 238, 451, 536, 1069, 1108, 1111, 1112, 1122, 1125, 1129, 1133, 1137, 1161, 1165, 1169, 1183, 1184, 1185], "least": [0, 2, 1119, 1128], "slot": [0, 28, 115, 161, 204, 227, 276, 327, 417, 549, 704, 770, 845, 946, 996, 1058, 1063, 1126], "slot_uri": [0, 3, 4, 17, 21, 22, 23, 24, 30, 37, 44, 61, 68, 73, 74, 75, 76, 77, 79, 84, 86, 89, 95, 128, 167, 181, 184, 199, 214, 219, 225, 229, 230, 237, 239, 242, 244, 245, 246, 249, 313, 352, 375, 382, 386, 390, 391, 395, 396, 398, 404, 407, 412, 413, 414, 419, 426, 428, 429, 443, 446, 449, 452, 454, 455, 462, 464, 466, 474, 476, 478, 482, 487, 490, 491, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 520, 521, 522, 523, 524, 529, 532, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 608, 609, 611, 612, 613, 614, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 633, 634, 635, 636, 637, 638, 639, 641, 642, 645, 646, 647, 648, 649, 651, 653, 654, 656, 657, 659, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 697, 727, 728, 729, 730, 731, 766, 767, 786, 795, 797, 798, 805, 807, 808, 815, 837, 841, 847, 873, 877, 887, 904, 909, 915, 919, 920, 921, 938, 941, 942, 943, 944, 956, 957, 958, 959, 961, 967, 968, 980, 990, 1000, 1007, 1013, 1014, 1015, 1017, 1022, 1037, 1050, 1051, 1061, 1062, 1070, 1075, 1084, 1086, 1088, 1095], "attribut": [0, 3, 4, 17, 20, 21, 22, 23, 24, 45, 94, 95, 96, 155, 159, 214, 215, 219, 225, 229, 264, 265, 266, 267, 271, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 478, 481, 482, 487, 490, 491, 504, 505, 506, 507, 508, 509, 510, 511, 514, 523, 524, 532, 535, 537, 538, 539, 542, 543, 544, 547, 679, 694, 695, 697, 698, 745, 766, 767, 768, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 938, 941, 942, 943, 944, 980, 990, 991, 992, 993, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1057, 1060, 1061, 1062, 1063, 1101, 1108, 1169], "power": [0, 1125, 1134, 1142], "soon": [0, 1115, 1142], "now": [0, 1105, 1114, 1115, 1119, 1120, 1131, 1132, 1133, 1134, 1178, 1185], "pleas": [0, 1104, 1107, 1137, 1185], "issu": [0, 395, 436, 462, 478, 482, 490, 497, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 1037, 1042, 1053, 1062, 1064, 1069, 1070, 1086, 1102, 1107, 1109, 1122, 1143, 1153], "question": [0, 2, 1102, 1110, 1119, 1125], "fuzzi": 0, "detect": [0, 1128], "inconsist": 0, "replac": [0, 1, 323, 333, 505, 696, 1109, 1117, 1121, 1147, 1169, 1174, 1175, 1177, 1195], "optim": [0, 1168], "whichev": [0, 1128], "post": [0, 1102, 1168, 1170], "missing_value_token": 0, "comment": [0, 3, 17, 21, 22, 23, 46, 214, 318, 383, 390, 395, 396, 398, 404, 412, 414, 439, 478, 482, 487, 490, 505, 507, 510, 511, 514, 523, 532, 535, 537, 542, 543, 547, 615, 616, 695, 696, 745, 829, 830, 844, 941, 943, 955, 1117, 1169, 1173], "indic": [0, 407, 439, 487, 697, 719, 734, 1108, 1110, 1111, 1117, 1131, 1195, 1196], "begin": [0, 1179], "string": [0, 1, 3, 4, 6, 14, 15, 16, 17, 20, 22, 25, 37, 39, 40, 41, 46, 52, 54, 67, 68, 69, 77, 88, 89, 91, 95, 97, 105, 106, 107, 112, 122, 127, 137, 144, 147, 148, 149, 151, 155, 156, 157, 165, 175, 181, 184, 193, 198, 199, 206, 214, 217, 218, 219, 220, 223, 225, 231, 232, 233, 236, 242, 243, 254, 262, 263, 264, 266, 267, 268, 271, 272, 279, 281, 284, 285, 292, 294, 299, 307, 308, 309, 311, 312, 313, 315, 318, 319, 320, 321, 323, 324, 329, 331, 333, 334, 339, 340, 341, 343, 344, 345, 347, 348, 354, 355, 356, 357, 359, 362, 363, 366, 368, 370, 371, 375, 377, 382, 383, 384, 386, 387, 388, 390, 393, 394, 395, 396, 397, 398, 402, 404, 405, 407, 410, 412, 413, 414, 415, 419, 420, 423, 426, 431, 435, 439, 441, 442, 443, 447, 449, 452, 453, 454, 457, 459, 460, 461, 464, 466, 470, 474, 475, 476, 478, 481, 482, 487, 489, 490, 491, 492, 504, 505, 508, 509, 510, 511, 512, 513, 514, 517, 518, 519, 520, 521, 522, 523, 525, 526, 529, 532, 535, 537, 538, 539, 540, 542, 543, 545, 547, 548, 551, 552, 558, 559, 560, 562, 563, 567, 568, 569, 570, 572, 574, 575, 576, 578, 582, 584, 586, 589, 591, 592, 595, 596, 601, 604, 605, 613, 615, 616, 620, 621, 628, 630, 631, 632, 639, 640, 641, 642, 643, 648, 649, 650, 651, 652, 653, 654, 655, 658, 659, 661, 662, 666, 668, 672, 673, 675, 676, 679, 680, 689, 690, 691, 697, 699, 701, 711, 719, 725, 727, 728, 729, 730, 731, 732, 740, 745, 747, 756, 757, 758, 764, 766, 767, 775, 776, 781, 782, 786, 787, 788, 790, 791, 792, 797, 798, 802, 807, 808, 815, 817, 819, 820, 826, 827, 829, 830, 832, 833, 834, 837, 838, 840, 842, 844, 864, 867, 873, 874, 875, 881, 882, 883, 884, 886, 887, 893, 897, 902, 904, 906, 915, 919, 920, 925, 933, 934, 935, 938, 939, 941, 942, 943, 944, 950, 952, 955, 956, 973, 980, 982, 983, 984, 988, 990, 991, 993, 999, 1003, 1004, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1017, 1018, 1019, 1021, 1022, 1025, 1027, 1031, 1037, 1040, 1041, 1042, 1044, 1049, 1054, 1060, 1062, 1064, 1069, 1070, 1076, 1077, 1078, 1080, 1082, 1085, 1087, 1089, 1090, 1092, 1093, 1094, 1098, 1108, 1109, 1118, 1131, 1134, 1148, 1153, 1183, 1185, 1195], "correspond": [0, 1, 2, 155, 165, 167, 184, 191, 192, 193, 396, 422, 439, 1037, 1062, 1095, 1108, 1116, 1119, 1128, 1169], "relation_fil": 0, "extens": [0, 497, 615, 1110, 1111, 1115, 1119, 1125, 1138, 1162], "foodon": 0, "03315258": 0, "style": [0, 509, 700, 1115, 1125], "hint": [0, 1125], "pretenti": 0, "food": [0, 1120], "critic": 0, "pancak": 0, "humbl": 0, "delight": 0, "realm": [0, 1110], "breakfast": 0, "fare": 0, "delect": 0, "disc": 0, "gastronom": 0, "style_hint": 0, "descript": [0, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 165, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 232, 233, 234, 235, 236, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 281, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 326, 330, 331, 332, 333, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 399, 403, 404, 405, 406, 407, 408, 409, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 490, 491, 497, 499, 501, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 523, 524, 525, 528, 529, 530, 531, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 577, 578, 579, 580, 581, 582, 584, 585, 586, 587, 588, 589, 590, 591, 593, 594, 595, 596, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 629, 632, 637, 638, 639, 640, 643, 646, 647, 648, 649, 650, 651, 654, 657, 659, 660, 661, 662, 663, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 678, 679, 687, 694, 695, 696, 697, 698, 700, 706, 707, 708, 709, 710, 711, 712, 713, 718, 719, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 763, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 801, 802, 803, 804, 805, 806, 807, 808, 809, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 865, 866, 867, 868, 870, 871, 872, 874, 875, 876, 877, 878, 879, 881, 882, 883, 884, 885, 887, 888, 889, 890, 891, 892, 894, 895, 896, 897, 898, 899, 900, 901, 903, 904, 905, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 924, 938, 941, 942, 943, 944, 948, 949, 950, 951, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 995, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1053, 1057, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1108, 1119, 1120, 1125, 1128, 1142, 1177], "written": [0, 1111, 1118, 1135], "patch_format": 0, "iao": [0, 396, 428, 478, 482, 487, 490, 505, 507, 508, 509, 510, 511, 514, 523, 529, 532, 535, 537, 542, 543, 547, 552, 572, 577, 578, 585, 586, 591, 599, 601, 605, 606, 612, 648, 666, 667, 668, 1109, 1117, 1169], "spatial": 0, "min_descend": 0, "duplic": 0, "patterns_fil": 0, "origin": [0, 46, 73, 74, 75, 271, 279, 281, 320, 331, 333, 1117, 1169], "analyz": 0, "consist": [0, 155, 165, 184, 190, 193, 1050, 1061, 1069, 1084, 1102, 1108, 1111, 1112, 1115, 1134, 1175, 1176], "progress": [0, 1122], "unmelt": 0, "wide": [0, 1108, 1109, 1110, 1118, 1125], "lso": 0, "foo_rul": 0, "foo_syn": 0, "NOT": [0, 478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 678, 941, 957, 1126, 1137, 1162, 1169, 1185], "rules_datamodel": 0, "matcher_rul": [0, 275, 326], "minim": [0, 407, 439, 1104, 1169, 1174], "few": [0, 275, 326, 995, 1104, 1107, 1142, 1162], "xref": [0, 375, 382, 396, 407, 413, 419, 422, 439, 844, 884, 888, 890, 1109, 1116, 1119, 1131, 1179], "multivalu": [0, 3, 4, 17, 20, 22, 24, 32, 33, 36, 37, 66, 67, 80, 84, 85, 87, 88, 90, 92, 96, 133, 155, 159, 185, 186, 190, 191, 214, 215, 225, 229, 230, 235, 239, 240, 241, 242, 249, 264, 265, 266, 267, 271, 280, 285, 286, 287, 289, 293, 309, 310, 311, 312, 314, 319, 320, 332, 339, 344, 345, 348, 349, 350, 355, 358, 360, 362, 363, 369, 370, 375, 382, 383, 384, 387, 390, 391, 395, 396, 405, 407, 413, 419, 421, 422, 423, 424, 425, 426, 430, 431, 432, 433, 434, 436, 437, 444, 447, 448, 455, 456, 459, 462, 465, 466, 468, 469, 477, 478, 482, 487, 490, 491, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 523, 524, 529, 532, 535, 537, 538, 539, 542, 543, 544, 547, 552, 556, 557, 560, 561, 562, 564, 565, 566, 568, 570, 571, 572, 573, 574, 577, 578, 579, 582, 584, 585, 586, 587, 588, 590, 591, 594, 595, 596, 598, 600, 602, 603, 604, 606, 608, 609, 612, 614, 627, 637, 638, 639, 646, 649, 651, 654, 656, 657, 659, 661, 662, 663, 664, 666, 668, 670, 679, 694, 695, 698, 706, 707, 709, 713, 726, 733, 736, 739, 768, 794, 799, 804, 809, 819, 829, 830, 842, 844, 848, 856, 858, 859, 865, 868, 876, 878, 889, 890, 891, 899, 903, 908, 914, 941, 943, 950, 951, 957, 958, 960, 961, 962, 964, 966, 971, 990, 991, 992, 998, 999, 1011, 1012, 1019, 1027, 1050, 1051, 1060, 1061, 1084, 1096], "mixtur": [0, 1101], "boolean": [0, 3, 4, 17, 21, 22, 42, 45, 46, 47, 48, 49, 50, 51, 53, 71, 78, 82, 83, 95, 117, 123, 127, 165, 166, 169, 178, 236, 271, 281, 291, 313, 320, 333, 346, 364, 396, 413, 429, 439, 440, 478, 482, 487, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 580, 615, 622, 623, 624, 625, 626, 695, 697, 712, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 725, 782, 884, 941, 943, 948, 949, 953, 955, 963, 965, 970, 990, 991, 1002, 1003, 1005, 1042, 1048, 1049, 1066, 1069, 1073, 1081, 1091, 1169], "stato": 0, "ontobe": [0, 829, 1105, 1108, 1130, 1133, 1138, 1143, 1154, 1164, 1167], "0000286": 0, "0000287": 0, "forest": 0, "subtyp": [0, 406, 439, 1144], "hypothesi": 0, "oper": [0, 251, 281, 296, 333, 695, 719, 1050, 1069, 1084, 1102, 1104, 1108, 1110, 1115, 1119, 1120, 1130, 1131, 1132, 1134, 1138, 1139, 1142, 1154, 1169, 1171, 1172, 1173, 1174, 1175, 1177, 1178, 1179, 1181, 1184], "frequenc": [0, 1120, 1180], "equal": [0, 1063, 1174], "divid": [0, 767, 779, 782, 785, 1108, 1120], "total": [0, 95, 119, 127, 135, 1120], "corpu": [0, 1120, 1180], "ic": [0, 767, 774, 782, 783, 796, 806, 1120, 1180], "4023093": 0, "ones": [0, 1111], "multilingu": [0, 1113, 1169, 1173, 1195], "sql": [0, 700, 744, 1101, 1102, 1104, 1108, 1119, 1126, 1131, 1133, 1137, 1139, 1142, 1143, 1154, 1167, 1169, 1184, 1185], "restrict": [0, 1, 383, 384, 388, 390, 395, 421, 424, 435, 439, 457, 478, 482, 485, 487, 490, 491, 505, 508, 510, 511, 514, 523, 532, 537, 538, 542, 543, 547, 551, 554, 555, 558, 563, 570, 578, 582, 584, 587, 597, 605, 615, 617, 618, 646, 647, 651, 654, 656, 657, 661, 663, 668, 672, 1108, 1115, 1119, 1134, 1166, 1169, 1175], "fr": [0, 2, 142, 1118, 1169], "hpintern": 0, "0020110": 0, "pivot": 0, "per": [0, 396, 426, 1060, 1072, 1102, 1108, 1118, 1120, 1169, 1181, 1195], "multi": [0, 391, 1109, 1131], "lingual": 0, "rather": [0, 2, 943, 948, 955, 1108, 1117, 1119, 1138, 1143], "avail": [0, 1104, 1108, 1136, 1137, 1176, 1183, 1185], "cob": [0, 1108, 1169], "wrapper": [0, 1108, 1125, 1147], "onto": [0, 844, 884, 1108, 1110, 1125, 1147], "basicontologyinterfac": [0, 1, 204, 1109, 1117, 1132, 1142, 1150, 1169, 1171, 1173, 1178, 1181, 1184, 1185, 1195], "basic_ontology_interfac": [0, 1150, 1169], "tool": [0, 1, 4, 49, 51, 214, 229, 1104, 1108, 1110, 1115, 1120, 1122, 1128, 1135, 1162], "preprocess": 0, "step": [0, 1122, 1130, 1138, 1183], "addl": 0, "second": [0, 165, 193, 767, 782, 795, 797, 798, 1108, 1120, 1126, 1169, 1171], "member": [0, 509, 512, 513, 529, 552, 586, 600, 602, 603, 608, 615, 630], "omit": [0, 1, 1118, 1135, 1165, 1169, 1185], "trivial": [0, 1108, 1112, 1115, 1169], "reciproc": [0, 943, 967, 1177], "feed": [0, 1131], "nativ": [0, 3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 96, 155, 159, 214, 215, 219, 225, 229, 251, 252, 264, 265, 266, 267, 271, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 511, 514, 523, 524, 528, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 679, 694, 695, 697, 698, 745, 763, 766, 767, 768, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 938, 941, 942, 943, 944, 980, 990, 991, 992, 993, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1057, 1060, 1061, 1062, 1101, 1108, 1121, 1138, 1147], "faster": [0, 1120, 1169], "custom": [0, 1109, 1113, 1115, 1128, 1162, 1165], "match_rul": 0, "packag": [0, 2, 337, 1104, 1112, 1125, 1128, 1131, 1132, 1135, 1147, 1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176, 1187, 1196], "lexical_index": [0, 283, 335, 336, 1167, 1173, 1183], "modul": [0, 1128, 1129, 1143, 1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "fragment": [0, 1121], "local": [0, 27, 46, 114, 127, 160, 165, 226, 236, 274, 281, 325, 333, 416, 439, 546, 615, 703, 719, 769, 782, 843, 884, 945, 955, 994, 1003, 1056, 1069, 1105, 1108, 1112, 1118, 1130, 1133, 1138, 1139, 1142, 1143, 1160, 1161, 1162, 1164, 1165, 1168, 1173, 1183, 1185, 1195], "semant": [0, 1, 2, 204, 375, 382, 384, 396, 407, 413, 419, 477, 744, 1102, 1108, 1110, 1112, 1118, 1120, 1126, 1129, 1133, 1137, 1165, 1167, 1173, 1185, 1195], "load": [0, 1104, 1105, 1110, 1119, 1120, 1137, 1139, 1142, 1147, 1156, 1161, 1163, 1165, 1175, 1185], "ensur": [0, 1134, 1137, 1143, 1156, 1161, 1163], "strict": [0, 1108, 1110, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "clean": 0, "befor": [0, 313, 333, 352, 1107, 1115, 1131, 1150], "highli": [0, 1108, 1121, 1142, 1151, 1169, 1184], "incomplet": [0, 1120, 1151, 1162, 1163], "syntact": [0, 1104], "whitespac": [0, 275, 326, 995], "trail": 0, "compliant": 0, "execut": [0, 1048, 1060, 1066, 1069, 1072, 1082, 1085, 1096, 1099, 1108, 1169], "mode": [0, 202, 295, 372, 471, 671, 743, 812, 916, 1028, 1097], "workflow": [0, 1125], "emit": [0, 1133], "manual": [0, 4, 50, 1115, 1117, 1179, 1195], "check": [0, 1, 19, 109, 153, 222, 270, 317, 401, 533, 693, 762, 836, 937, 986, 1037, 1042, 1047, 1062, 1064, 1065, 1067, 1069, 1070, 1071, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1086, 1087, 1088, 1089, 1090, 1092, 1093, 1094, 1095, 1098, 1115, 1126, 1169, 1176, 1184], "examin": [0, 155, 165, 1182], "report_format": 0, "propos": [0, 478, 482, 487, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 569, 570, 943, 949, 955, 1108, 1128, 1138], "noth": [0, 1169, 1171, 1172, 1174, 1178, 1179, 1181, 1184], "branch": [0, 1125, 1182], "physic": 0, "qualiti": [0, 1131], "render": 0, "definedclassid": [0, 395, 439, 1115], "0045071": 0, "genusid": [0, 395, 439, 1115, 1175], "0001439": 0, "fillerid": [0, 388, 439, 1115, 1175], "0000461": 0, "propertyid": [0, 388, 439, 1115, 1175], "ro": [0, 487, 490, 532, 547, 620, 621, 638, 665, 938, 941, 957, 958, 961, 1102, 1108, 1115, 1119, 1132, 1133, 1137, 1139, 1169], "0015010": 0, "flatten": 0, "choos": [0, 1111, 1112, 1115, 1119, 1134, 1169, 1175, 1183, 1184], "ax": 0, "filler": [0, 388, 435, 439, 1115, 1139, 1169, 1175, 1178], "genu": [0, 395, 427, 436, 439, 445, 462, 478, 497, 507, 511, 514, 523, 543, 577, 1125, 1175], "repeat": [0, 1142], "prop_1": 0, "prop_2": 0, "differentia": [0, 395, 439, 462, 478, 497, 507, 511, 514, 523, 543, 577, 1125, 1175], "what": [0, 1, 767, 773, 1105, 1108, 1113, 1119, 1122, 1125, 1134], "inspect": 0, "nest": [0, 407, 1115], "logicaldefinit": 0, "matrix_ax": 0, "encod": [0, 1, 14, 15, 25, 46, 105, 106, 112, 127, 147, 148, 157, 165, 217, 218, 223, 236, 262, 263, 272, 281, 307, 308, 321, 333, 393, 394, 410, 439, 517, 518, 540, 615, 689, 690, 701, 719, 756, 757, 764, 782, 832, 833, 838, 884, 933, 934, 939, 955, 982, 983, 988, 1003, 1040, 1041, 1054, 1069, 1116, 1120, 1133], "retriev": [0, 1117, 1168, 1169, 1182, 1195], "subset_siren": 0, "maps_to_sourc": 0, "mapper": [0, 1118, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "rewir": [0, 1177], "instanc": [0, 1, 14, 15, 25, 105, 106, 112, 147, 148, 157, 217, 218, 223, 262, 263, 272, 307, 308, 321, 383, 393, 394, 410, 439, 478, 511, 512, 513, 517, 518, 523, 529, 540, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 627, 637, 648, 649, 657, 660, 666, 667, 668, 670, 689, 690, 701, 756, 757, 764, 832, 833, 838, 933, 934, 938, 939, 942, 982, 983, 988, 1037, 1040, 1041, 1054, 1062, 1063, 1069, 1070, 1071, 1075, 1078, 1079, 1086, 1087, 1088, 1095, 1108, 1111, 1157, 1169], "target": [0, 2, 386, 449, 1109, 1144, 1146, 1147, 1148, 1168, 1170, 1174, 1175], "src1": 0, "tgt1": 0, "src2": 0, "tgt2": 0, "migrate_curi": [0, 1173, 1177], "patcherinterfac": [0, 1138, 1173, 1177], "patcher": [0, 1101, 1108, 1163, 1167, 1173], "patcher_interfac": [0, 1177], "curie_pair": 0, "updat": [0, 40, 46, 478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 574, 615, 1138, 1139, 1162], "translat": [0, 28, 115, 161, 227, 276, 327, 384, 388, 390, 417, 433, 549, 704, 770, 845, 946, 996, 1058, 1117, 1168, 1170], "hgnc": [0, 225, 235, 1160], "ncbigen": [0, 1160], "0000187": 0, "0000188": 0, "taxonconstraint": [0, 938, 941, 942, 948, 949, 950, 951, 953, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 971], "replaced_bi": [0, 478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598], "pre": [0, 1107, 1119, 1120, 1137, 1166, 1174, 1180, 1183, 1185], "yet": [0, 1117, 1126, 1169, 1185, 1195], "nuclear": [0, 1169], "shortest": [0, 1175], "cytoplasm": [0, 1119, 1161, 1169], "thylakoid": 0, "4": [0, 1108, 1109, 1115, 1118, 1125, 1127, 1129, 1130, 1161], "end": [0, 2, 396, 413, 422, 439, 467, 841, 877, 884, 1119, 1131, 1165, 1169, 1175], "start_nod": 0, "end_nod": 0, "weight": [0, 318, 333], "0001": 0, "999": 0, "after": [0, 2, 1102, 1104, 1131, 1135, 1151, 1158, 1169, 1171, 1172, 1174, 1177, 1178, 1179, 1181, 1184, 1196], "visual": [0, 1119, 1129, 1130, 1134], "narrow": [0, 318, 354, 408, 409], "gap": 0, "flat": [0, 1101, 1117], "point": [0, 14, 15, 105, 106, 147, 148, 217, 218, 262, 263, 307, 308, 393, 394, 517, 518, 689, 690, 756, 757, 832, 833, 933, 934, 941, 955, 957, 958, 982, 983, 1040, 1041, 1119, 1120, 1128, 1169, 1195], "exclude_pred": 0, "predicate_weight": [0, 1175], "stylemap": 0, "berkeleybop": 0, "kgviz": 0, "round": [0, 1170], "declar": [0, 214, 390, 391, 404, 439, 446, 454, 455, 1176], "thei": [0, 1, 204, 1106, 1108, 1115, 1117, 1119, 1120, 1121, 1131, 1133, 1134, 1137, 1142, 1147, 1164, 1169, 1170, 1173], "appear": [0, 1, 1121, 1147], "shacl": [0, 497, 615, 1037, 1062, 1095, 1126, 1184], "prefixdeclar": [0, 390, 391, 439, 446, 454, 455], "cl_": [0, 1112], "prefixmap": [0, 1113], "arbitrari": [0, 3, 10, 17, 22, 46, 80, 101, 127, 141, 165, 210, 236, 258, 281, 303, 333, 381, 407, 439, 450, 496, 615, 684, 719, 751, 782, 824, 884, 929, 955, 977, 1003, 1035, 1069, 1104, 1169, 1179], "sparql": [0, 25, 46, 112, 127, 157, 165, 223, 236, 272, 281, 321, 333, 410, 439, 540, 615, 701, 719, 764, 782, 838, 884, 939, 955, 988, 1003, 1054, 1069, 1108, 1118, 1133, 1139, 1142, 1143, 1154, 1158, 1166, 1167, 1169, 1185], "label_field": 0, "down": [0, 827, 881, 882, 884, 1175], "lung": 0, "And": [0, 1, 1111, 1115, 1119, 1125, 1128, 1131, 1132, 1133], "arteri": 0, "suppli": [0, 1112, 1174, 1175], "0002178": 0, "indirect": [0, 844, 878, 884, 1119, 1178], "tbox": 0, "subclass": [0, 384, 390, 421, 439, 844, 884, 910, 1102, 1117, 1131, 1144, 1169, 1176, 1195], "existenti": [0, 383, 388, 390, 424, 433, 435, 439, 457, 1108, 1115, 1119, 1169], "abox": 0, "assert": [0, 142, 375, 382, 396, 413, 419, 439, 440, 442, 445, 452, 467, 469, 474, 475, 477, 844, 884, 913, 914, 943, 955, 969, 971, 1108, 1117, 1119, 1131, 1133, 1168, 1169, 1170, 1184], "dimens": 0, "remaind": 0, "wb": 0, "0032502": 0, "0007568": 0, "0048869": 0, "0098727": 0, "0008152": [0, 1], "0009056": 0, "0044238": 0, "1901275": 0, "0050896": 0, "0051716": 0, "0051606": 0, "0014823": 0, "0023052": 0, "wbgene00000417": 0, "wbgene00000912": 0, "wbgene00000898": 0, "wbgene00006752": 0, "object_group": 0, "top": [0, 1111, 1128, 1134, 1195], "sometim": [0, 1, 1108, 1109, 1115, 1116, 1117, 1120, 1125, 1134, 1185], "unintuit": 0, "has_prefix": 0, "disk": [0, 1104, 1133, 1185], "substr": [0, 323, 333, 340, 359], "rank": [0, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 326, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 399, 404, 405, 406, 407, 408, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 482, 487, 490, 491, 497, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 520, 521, 522, 523, 524, 529, 532, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 678, 679, 687, 694, 695, 696, 697, 698, 700, 706, 707, 708, 709, 710, 712, 713, 718, 719, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 735, 736, 738, 739, 740, 741, 742, 745, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 819, 827, 830, 837, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 924, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 995, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1053, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1131, 1151, 1179], "your": [0, 2, 1102, 1107, 1112, 1122, 1125, 1128, 1130, 1131, 1132, 1143, 1151, 1160, 1162], "broad": [0, 1, 31, 46, 318, 354, 382, 408, 409, 1108, 1125, 1133], "relev": [0, 697, 719, 734, 1108, 1131, 1151, 1179], "There": [0, 1102, 1104, 1108, 1109, 1110, 1119, 1120, 1131, 1133, 1134, 1137, 1142], "stream": [0, 1101, 1126], "ctrl": [0, 1131], "stop": 0, "unifi": [0, 719, 737, 1109, 1131], "across": [0, 164, 165, 391, 439, 478, 487, 507, 511, 514, 523, 543, 627, 1107, 1133], "keyval": 0, "set1": 0, "terms1": 0, "set2": 0, "terms2": 0, "altern": [0, 1109, 1111, 1122, 1156, 1158, 1161, 1163, 1170], "term_1": 0, "term_2": 0, "term_n": 0, "term_m": 0, "select": [0, 767, 773, 1104, 1108, 1113, 1122, 1165, 1181], "ma": [0, 1116], "mix": [0, 41, 42, 166, 167, 175, 181, 184, 193, 198, 199, 483, 491, 499, 504, 505, 506, 507, 508, 509, 510, 528, 534, 538, 539, 632, 980], "pipelin": [0, 265, 267, 271, 281, 310, 312, 320, 333, 1183], "phenotyp": [0, 31, 46, 1108, 1110, 1111, 1120, 1169], "0000118": [0, 478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 552, 1109, 1169], "done": [0, 155, 165, 1108, 1111, 1112, 1119, 1120, 1125, 1137], "compactli": 0, "set1_fil": 0, "set2_fil": 0, "jaccard": [0, 767, 782, 801, 1108, 1113, 1180], "min_jaccard_similar": [0, 1180], "score": [0, 745, 767, 774, 779, 780, 782, 783, 784, 785, 796, 800, 801, 806, 810, 811, 813, 1120, 1166, 1168, 1180], "min_ancestor_information_cont": [0, 1180], "main_score_field": 0, "phenodigm_scor": [0, 767, 782, 802], "information_content_fil": 0, "varieti": [0, 1104, 1108, 1109, 1110, 1118, 1131, 1139, 1173], "metric": [0, 768, 782, 1120, 1182], "deprec": [0, 396, 413, 439, 440, 478, 479, 482, 487, 490, 501, 505, 508, 511, 514, 520, 521, 522, 523, 528, 530, 532, 534, 537, 542, 543, 547, 565, 569, 570, 589, 596, 598, 605, 615, 622, 623, 624, 625, 626, 639, 642, 643, 659, 667, 673, 695, 718, 720, 844, 871, 872, 884, 892, 895, 896, 1063, 1117, 1169, 1174, 1185, 1195], "0000540": [0, 1101], "0000000": 0, "hard": 0, "0001750": 0, "stage": [0, 1142, 1143], "found": [0, 1, 155, 165, 697, 719, 729, 941, 955, 957, 958, 1118, 1125, 1155, 1166, 1169, 1173, 1175], "adult": [0, 1131], "mrca": [0, 767, 773, 1120, 1180], "upheno": 0, "anatomi": [0, 1109, 1120, 1131], "0010922": 0, "0010616": 0, "0000001": [0, 1108, 1119, 1147, 1174], "pr": [0, 2, 1103, 1108, 1132, 1136, 1180], "break": [0, 829], "collect": [0, 1, 20, 24, 32, 33, 46, 57, 58, 59, 60, 62, 63, 64, 65, 81, 90, 96, 127, 133, 159, 165, 176, 185, 194, 204, 267, 281, 284, 293, 312, 314, 333, 342, 343, 360, 369, 374, 375, 382, 383, 384, 386, 387, 390, 391, 395, 396, 398, 405, 407, 413, 419, 421, 422, 426, 428, 429, 432, 433, 434, 437, 438, 439, 443, 444, 445, 448, 455, 456, 465, 466, 468, 469, 476, 477, 512, 513, 529, 542, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 584, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 622, 625, 627, 637, 648, 649, 654, 657, 659, 660, 666, 667, 668, 670, 829, 992, 998, 1003, 1050, 1051, 1061, 1069, 1084, 1108, 1125, 1139, 1142, 1162, 1168, 1169, 1174, 1175, 1180], "Its": 0, "non": [0, 1, 6, 21, 45, 46, 97, 137, 142, 206, 254, 275, 299, 326, 377, 482, 484, 487, 492, 512, 513, 529, 552, 553, 554, 555, 556, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 575, 577, 578, 579, 580, 584, 585, 586, 589, 590, 591, 593, 594, 595, 596, 598, 599, 600, 601, 602, 603, 604, 605, 608, 609, 610, 611, 612, 614, 615, 619, 620, 621, 622, 624, 625, 627, 637, 639, 648, 649, 654, 657, 659, 660, 662, 666, 667, 668, 670, 673, 680, 747, 820, 844, 884, 895, 896, 925, 973, 995, 1031, 1104, 1108, 1113, 1125, 1131, 1158, 1181, 1195], "lot": [0, 1, 1101, 1109, 1111, 1116, 1119, 1131], "mechan": [0, 1125, 1195], "releas": [0, 1, 1104, 1119, 1122, 1169], "product": [0, 767, 779, 782, 1110, 1115, 1117], "complic": [0, 1115], "naiv": [0, 1181], "kind": [0, 1, 407, 439, 442, 445, 452, 474, 475, 477, 719, 737, 782, 802, 817, 881, 882, 884, 1103, 1108, 1109, 1110, 1111, 1115, 1125, 1138, 1139, 1169, 1184], "summarystatist": [0, 1182], "broken": [0, 827, 829, 830, 881, 882, 884, 903], "dynam": [0, 1125], "rel": [0, 1109, 1119, 1120, 1132, 1133, 1139, 1161, 1169], "v2": 0, "v1": 0, "stat": [0, 829, 830, 903, 1182], "accordingli": 0, "residu": 0, "compare_with": 0, "concept": [0, 2, 490, 719, 737, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 782, 783, 785, 793, 794, 795, 796, 797, 798, 799, 801, 804, 805, 806, 807, 808, 809, 1108, 1109, 1112, 1113, 1114, 1115, 1116, 1117, 1119, 1121, 1130, 1131, 1138, 1147, 1169, 1175, 1183], "directli": [0, 1, 22, 28, 115, 161, 227, 251, 276, 296, 327, 374, 407, 417, 484, 537, 543, 544, 549, 704, 763, 770, 842, 845, 944, 946, 996, 1051, 1052, 1058, 1108, 1112, 1115, 1120, 1125, 1131, 1135, 1138, 1142, 1143, 1144, 1158, 1165, 1168], "goslim_gener": [0, 1169], "portion": [0, 980, 990, 1003, 1021, 1111, 1162], "ncbi": [0, 1120, 1160], "taxonomi": [0, 1111], "0034357": [0, 1170], "0003884": [0, 1173], "0003941": 0, "taxon_constraints_util": 0, "ancestr": 0, "category_system": 0, "biolink": [0, 3, 4, 17, 21, 22, 30, 73, 74, 75, 79, 84, 219, 225, 234, 247, 478, 482, 490, 504, 511, 514, 523, 532, 537, 542, 543, 547, 559, 1108, 1166], "dbpedia": 0, "hasdbxref": [0, 375, 407, 413, 419, 477, 478, 482, 487, 490, 506, 511, 514, 523, 532, 537, 542, 543, 547, 573, 1116, 1169], "without": [0, 844, 863, 884, 1101, 1104, 1108, 1116, 1119, 1130, 1138, 1169, 1170, 1173], "prontolib": [0, 1161], "objectproperti": [0, 1, 406, 478, 482, 486, 490, 512, 513, 514, 523, 528, 529, 534, 535, 537, 538, 542, 544, 547, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 582, 584, 585, 586, 588, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 618, 619, 622, 623, 625, 626, 627, 632, 637, 648, 649, 651, 654, 657, 659, 660, 665, 666, 667, 668, 670, 844, 872, 896, 898, 1108, 1169], "omo": [0, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 1060, 1069, 1085, 1109, 1117, 1118], "annotationproperti": [0, 1, 406, 478, 486, 487, 490, 512, 513, 514, 523, 528, 529, 532, 534, 535, 537, 542, 544, 547, 552, 553, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 584, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 609, 610, 611, 612, 614, 615, 619, 622, 625, 627, 637, 648, 649, 654, 657, 659, 660, 666, 667, 668, 670, 844, 849, 1108, 1169, 1184], "owl_typ": [0, 1169, 1173], "vacuol": [0, 1119, 1169, 1175], "ascii": [0, 1131], "markdown": 0, "instruct": [0, 1106, 1107, 1125, 1132], "analog": [0, 142, 1125], "too": [0, 1104, 1105, 1109, 1111, 1115], "00000372": 0, "00000094": 0, "volcan": 0, "featur": [0, 2, 395, 439, 462, 1103, 1104, 1110, 1111, 1119, 1128, 1131, 1137, 1138, 1139, 1196], "00000247": 0, "volcano": 0, "00000403": 0, "shield": 0, "pyroclast": 0, "view": [0, 1, 204, 1108, 1109, 1115, 1134, 1165, 1169, 1175, 1195], "explod": 0, "subglaci": 0, "alongsid": [0, 1101, 1110, 1126, 1131], "intermedi": [0, 1119], "mud": 0, "recent": [0, 767, 773, 782, 1120, 1180], "max": [0, 1168], "distanc": [0, 1131, 1137, 1175], "00000407": 0, "though": 0, "highlight": [0, 1131], "asterisk": 0, "length": [0, 767, 779, 782, 1063], "extend": [0, 1119, 1120, 1130, 1143, 1175], "max_hop": 0, "trim": [0, 275, 326, 995], "skip": [0, 1115], "against": [0, 319, 333, 339, 344, 345, 355, 362, 363, 370, 830, 842, 844, 865, 884, 1037, 1062, 1095, 1104, 1108, 1168, 1171, 1180, 1184], "ecto": 0, "ontology_metadata": [0, 1126], "heurist": [0, 1115, 1169], "align": [0, 1, 375, 396, 407, 413, 419, 477, 1108, 1139], "guid": [0, 1, 1102, 1105, 1106, 1108, 1111, 1114, 1125, 1129, 1168, 1181, 1184], "howto": [0, 1184], "50": [0, 1175], "presenc": 0, "mine": [0, 1113], "machin": [0, 396, 439, 1108, 1113, 1128, 1153, 1195], "action": [0, 2], "initi": [0, 1108, 1128, 1154, 1158, 1166], "lag": [0, 1131], "0002053": 0, "hierarchi": [0, 1111], "larg": [0, 1, 829, 1104, 1106, 1108, 1109, 1115, 1117, 1120, 1122, 1129, 1131, 1142, 1143, 1173, 1178, 1179], "focus": [0, 1119, 1120], "sole": [0, 1108], "bad": 0, "attempt": [0, 1109, 1111, 1121, 1126, 1131, 1133, 1147, 1166], "download": [0, 1104, 1111, 1126, 1130, 1131, 1135, 1139, 1142, 1175, 1185], "resolv": 0, "foreign": 0, "nnnnnnn": 0, "wildcard": [0, 700], "applic": [0, 21, 1101, 1104, 1108, 1109, 1134, 1142, 1143, 1177], "determinist": [0, 1125], "exactmatch": [0, 478, 482, 490, 506, 511, 514, 523, 532, 537, 542, 543, 544, 547, 615, 631], "cardin": [0, 1, 3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 96, 150, 155, 159, 165, 182, 200, 214, 215, 219, 225, 251, 252, 264, 265, 266, 267, 271, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 511, 514, 523, 524, 528, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 615, 630, 679, 694, 695, 697, 698, 745, 763, 766, 767, 768, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 938, 941, 942, 943, 944, 980, 990, 991, 992, 993, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1057, 1060, 1061, 1062, 1063], "expect": [0, 1112, 1115, 1160], "bespok": 0, "might": [0, 1, 31, 46, 382, 1108, 1111, 1115, 1120, 1128, 1131, 1183, 1184, 1195], "boomer": 0, "probabilist": 0, "reason": [0, 396, 426, 844, 884, 892, 943, 948, 1105, 1108, 1113, 1117, 1121, 1128, 1131, 1169, 1176, 1184], "qualit": 0, "adapter_map": 0, "except": [0, 1116, 1117, 1169, 1175, 1177], "want": [0, 1105, 1109, 1110, 1113, 1119, 1120, 1128, 1131, 1137, 1138, 1185], "obographviz": [0, 1130, 1134], "meant": 0, "0002202": [0, 1119, 1137, 1139], "abbrevi": [0, 415, 1130], "open": [0, 31, 46, 396, 413, 422, 439, 467, 479, 480, 1106, 1110, 1119, 1133, 1135, 1168, 1169], "imag": [0, 478, 482, 486, 490, 510, 511, 512, 513, 523, 528, 529, 532, 534, 535, 537, 542, 543, 544, 547, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 612, 614, 615, 616, 619, 627, 637, 648, 649, 657, 660, 666, 667, 668, 670, 1131, 1162], "meta": [0, 374, 375, 382, 383, 384, 386, 387, 390, 391, 395, 398, 405, 407, 413, 419, 422, 426, 428, 429, 439, 450, 466, 469, 476, 477, 1169, 1175], "note": [1, 2, 4, 21, 22, 49, 51, 78, 219, 225, 232, 251, 296, 337, 374, 388, 390, 407, 415, 433, 484, 487, 537, 543, 544, 615, 745, 763, 787, 842, 941, 944, 958, 1051, 1052, 1104, 1107, 1108, 1109, 1111, 1113, 1115, 1117, 1118, 1120, 1125, 1131, 1138, 1142, 1151, 1160, 1162, 1165, 1168, 1169, 1171, 1174, 1175, 1176, 1182, 1194, 1195], "describ": [1, 4, 30, 31, 34, 36, 46, 47, 48, 49, 50, 51, 54, 55, 56, 69, 70, 71, 72, 79, 82, 83, 84, 86, 91, 214, 236, 242, 1049, 1126, 1138, 1142, 1171, 1185], "arch": 1, "librari": [1, 204, 1104, 1108, 1111, 1113, 1120, 1128, 1129, 1130, 1134, 1135, 1136, 1137, 1139, 1142, 1158, 1161, 1165, 1185, 1194], "impos": [1, 1112], "own": [1, 1109, 1111, 1112, 1121, 1122, 1130, 1169, 1185], "world": [1, 1110, 1184], "intend": [1, 719, 737, 1104, 1106, 1108, 1109, 1110, 1115, 1118, 1142, 1163, 1169, 1170, 1195], "lingua": 1, "franca": 1, "veri": [1, 1102, 1104, 1106, 1109, 1111, 1116, 1118, 1125, 1131, 1142, 1157, 1162], "keep": [1, 2, 21, 46, 78], "rang": [1, 3, 4, 17, 20, 21, 22, 23, 24, 28, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 115, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 155, 159, 161, 163, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 214, 215, 219, 225, 227, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 276, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 327, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 417, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 520, 521, 522, 523, 524, 528, 529, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 549, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 679, 694, 695, 697, 698, 704, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 763, 766, 767, 768, 770, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 845, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 938, 941, 942, 943, 944, 946, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 996, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1057, 1058, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1104, 1110, 1125, 1131, 1158, 1185], "address": [1, 1108], "user": [1, 396, 426, 695, 709, 711, 712, 718, 719, 720, 721, 722, 724, 733, 739, 741, 1104, 1109, 1111, 1115, 1119, 1120, 1131, 1134, 1143, 1165, 1181, 1183, 1185], "quit": [1, 1168], "straightforward": 1, "someth": [1, 214, 229, 408, 525, 615, 1106, 1108, 1109, 1110, 1125, 1128], "paper": 1, "2000": 1, "thousand": [1, 1143], "inter": [1, 1144], "term": [1, 4, 31, 46, 50, 55, 70, 71, 95, 117, 123, 127, 214, 230, 236, 264, 266, 271, 275, 278, 279, 281, 282, 285, 286, 288, 289, 290, 291, 294, 309, 311, 320, 326, 330, 331, 333, 335, 348, 349, 353, 358, 361, 364, 371, 390, 395, 408, 427, 436, 439, 444, 445, 450, 462, 478, 482, 486, 487, 490, 501, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 523, 524, 528, 529, 532, 534, 535, 537, 542, 544, 547, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 584, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 622, 625, 627, 637, 648, 649, 654, 657, 659, 660, 662, 666, 667, 668, 670, 695, 697, 700, 719, 722, 727, 728, 730, 731, 739, 741, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 782, 785, 793, 794, 795, 796, 797, 798, 799, 801, 804, 805, 806, 807, 808, 809, 938, 941, 942, 943, 952, 954, 955, 956, 957, 958, 960, 961, 962, 967, 970, 971, 995, 1108, 1109, 1110, 1111, 1115, 1117, 1119, 1120, 1121, 1125, 1130, 1132, 1135, 1138, 1139, 1143, 1151, 1168, 1169, 1170, 1174, 1178, 1179, 1180, 1181, 1183, 1184, 1185, 1195, 1196], "howev": [1, 1104, 1106, 1108, 1109, 1110, 1112, 1115, 1119, 1120, 1121, 1125, 1131, 1133, 1143, 1165, 1195], "turn": [1, 1118, 1194], "flexibl": [1, 1108], "malleabl": 1, "prov": [1, 214, 249, 251, 296, 478, 482, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 566, 571, 815, 841, 847, 877, 909, 921, 1061], "logic": [1, 390, 396, 430, 439, 444, 482, 487, 497, 512, 513, 529, 532, 538, 552, 553, 554, 555, 556, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 575, 577, 578, 579, 580, 582, 584, 585, 586, 588, 589, 590, 591, 593, 594, 595, 596, 598, 599, 600, 601, 602, 603, 604, 605, 608, 609, 610, 611, 612, 614, 615, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 637, 639, 648, 649, 651, 654, 657, 659, 660, 662, 665, 666, 667, 668, 670, 673, 844, 874, 884, 1102, 1106, 1108, 1110, 1111, 1113, 1119, 1133, 1169, 1175, 1184, 1195], "artifact": 1, "exampl": [1, 204, 214, 219, 225, 232, 235, 236, 249, 478, 482, 490, 510, 511, 514, 523, 532, 537, 542, 543, 547, 591, 644, 696, 827, 829, 830, 903, 1101, 1105, 1106, 1107, 1108, 1109, 1111, 1113, 1115, 1117, 1118, 1120, 1121, 1122, 1125, 1126, 1129, 1130, 1131, 1133, 1135, 1143, 1147, 1154, 1167, 1168, 1170, 1171, 1173, 1175, 1176, 1179, 1183, 1184, 1195, 1196], "countri": 1, "knowledg": [1, 3, 4, 17, 21, 22, 30, 46, 79, 1106, 1108, 1111, 1120, 1125, 1131, 1132, 1133, 1166, 1168], "entireti": 1, "wikidata": [1, 1057, 1133], "try": [1, 1107, 1131, 1132, 1137, 1138, 1185, 1195], "pluralist": [1, 1101, 1108, 1109, 1134, 1195], "appropri": [1, 1133, 1138], "abstract": [1, 22, 251, 296, 374, 407, 484, 537, 543, 544, 567, 592, 615, 616, 630, 631, 643, 652, 655, 658, 664, 676, 763, 782, 783, 802, 842, 848, 865, 883, 884, 899, 922, 944, 1051, 1052, 1069, 1108, 1118, 1131, 1134, 1137, 1142, 1145, 1162, 1164, 1173, 1178], "commun": [1, 1108, 1113, 1116, 1138], "serv": [1, 1108, 1111, 1139, 1142, 1166, 1169, 1174], "classic": [1, 1120], "those": [1, 214, 229, 396, 422, 439, 1108, 1110, 1116, 1169, 1175], "conceiv": [1, 1120, 1134, 1175], "loos": [1, 1108], "thought": [1, 1119, 1195], "persist": [1, 1108, 1138], "variou": [1, 1108, 1120, 1131, 1138, 1189], "metadata": [1, 4, 50, 204, 214, 229, 230, 231, 233, 236, 239, 241, 242, 243, 244, 249, 374, 375, 382, 383, 384, 386, 387, 390, 391, 395, 396, 398, 405, 407, 413, 419, 439, 445, 507, 577, 627, 644, 844, 849, 884, 1108, 1110, 1111, 1113, 1116, 1121, 1122, 1129, 1133, 1151, 1169, 1174, 1175, 1177, 1179, 1184], "associ": [1, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 204, 404, 407, 439, 442, 445, 446, 452, 474, 475, 477, 841, 884, 921, 1101, 1108, 1109, 1113, 1120, 1129, 1160, 1161, 1164, 1165, 1167, 1169, 1170, 1173, 1185], "predomin": 1, "purpos": [1, 204, 390, 398, 412, 414, 443, 512, 513, 529, 542, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 584, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 622, 625, 627, 637, 648, 649, 654, 657, 659, 660, 666, 667, 668, 670, 719, 737, 1108, 1109, 1110, 1112, 1115, 1119, 1125, 1137, 1142], "necessarili": [1, 1108, 1195], "disjoint": [1, 383, 424, 425, 430, 439, 473, 1108, 1169, 1175, 1176], "categori": [1, 142, 155, 165, 214, 236, 478, 482, 490, 504, 511, 514, 522, 523, 532, 537, 542, 543, 547, 615, 616, 695, 719, 829, 844, 852, 858, 884, 991, 1003, 1042, 1069, 1108, 1119, 1166, 1169], "ambigu": [1, 1108, 1110, 1169], "equat": [1, 383, 439, 472, 1108], "broadli": [1, 1108, 1120], "encompass": [1, 31, 46, 1108, 1169], "scotland": 1, "denot": [1, 1108, 1109, 1111], "strictli": [1, 1107], "three": [1, 1104, 1110], "datatypeproperti": [1, 406, 844, 870, 1108, 1169], "discrimin": 1, "confus": [1, 1105, 1108, 1119, 1185], "ask": [1, 1110, 1119, 1125, 1134, 1169], "think": [1, 1108, 1195], "would": [1, 219, 225, 234, 235, 1104, 1108, 1113, 1115, 1117, 1119, 1120, 1125, 1128, 1142, 1195], "also": [1, 155, 165, 407, 439, 1102, 1104, 1108, 1109, 1110, 1111, 1112, 1115, 1116, 1117, 1119, 1120, 1125, 1128, 1131, 1132, 1133, 1137, 1147, 1154, 1155, 1157, 1158, 1161, 1162, 1166, 1168, 1169, 1174, 1175, 1177, 1179, 1185], "accustom": 1, "stand": [1, 1104, 1111, 1119], "alon": 1, "monolith": 1, "make": [1, 829, 1101, 1103, 1107, 1108, 1109, 1110, 1118, 1119, 1120, 1121, 1125, 1126, 1128, 1131, 1132, 1137, 1138, 1143, 1195], "assumpt": [1, 155, 165, 1118, 1121], "fact": [1, 1111, 1115, 1119, 1131, 1142], "organ": [1, 829, 855, 1108, 1111, 1119, 1166, 1194], "modular": 1, "compon": [1, 497, 615, 1117, 1128, 1175, 1183], "much": [1, 1105, 1142, 1195], "softwar": [1, 1128, 1135], "evolv": 1, "program": [1, 1108, 1111, 1128, 1131, 1132], "incorpor": [1, 1119, 1131], "design": [1, 165, 175, 193, 204, 1105, 1108, 1119, 1125, 1129, 1142, 1147], "worri": [1, 1101, 1131, 1142, 1173], "everyth": [1, 439, 450, 1102, 1108, 1111, 1112, 1119], "were": [1, 1117, 1125, 1133, 1155, 1169], "actual": [1, 944, 955, 1101, 1108, 1119], "let": [1, 1119, 1132], "explor": [1, 1113, 1114, 1120, 1179], "composit": 1, "driven": [1, 1126], "infrastructur": 1, "web": [1, 1106, 1108, 1111, 1112, 1118, 1133, 1135, 1195], "stack": 1, "scienc": [1, 1108, 1131], "bioinformat": [1, 1108, 1119, 1134, 1153], "bridg": [1, 1133], "essenti": [1, 1119], "expand": [1, 6, 97, 137, 206, 254, 275, 299, 326, 377, 492, 680, 747, 820, 925, 973, 995, 1031, 1169, 1175, 1177], "contract": [1, 1169], "seem": [1, 1115, 1142], "surpris": [1, 1131], "construct": [1, 374, 439, 1104, 1108, 1111, 1119, 1121, 1147, 1169, 1195], "call": [1, 1105, 1108, 1110, 1120, 1131, 1138, 1142, 1150, 1169, 1194], "owlinterfac": [1, 204, 1130, 1152, 1173, 1176], "rdfinterfac": 1, "common": [1, 31, 46, 318, 373, 767, 773, 782, 1106, 1108, 1109, 1111, 1115, 1117, 1118, 1119, 1120, 1129, 1131, 1139, 1142, 1143, 1173, 1180], "opaqu": 1, "exactli": [1, 142, 155, 163, 165, 166, 1143], "human": [1, 31, 46, 149, 165, 167, 390, 396, 398, 412, 414, 439, 443, 511, 512, 513, 519, 525, 529, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 627, 637, 648, 649, 657, 660, 666, 667, 668, 670, 696, 938, 941, 942, 944, 955, 956, 1108, 1109, 1110, 1111, 1112, 1113, 1119, 1120, 1195], "represent": [1, 6, 97, 137, 206, 254, 299, 377, 419, 439, 450, 489, 492, 548, 615, 680, 747, 820, 925, 973, 1031, 1108, 1111, 1113, 1117, 1119, 1120, 1161, 1170], "univers": [1, 384, 390, 421, 439, 1109, 1118], "preflabel": [1, 219, 234, 478, 487, 507, 511, 514, 523, 543, 627, 990, 1014, 1108, 1118, 1195], "share": [1, 202, 264, 281, 289, 292, 295, 309, 333, 358, 366, 372, 471, 671, 743, 812, 916, 1028, 1097, 1107, 1108, 1110, 1116, 1120, 1169], "multipl": [1, 214, 215, 229, 384, 391, 396, 421, 426, 431, 439, 445, 450, 453, 459, 695, 739, 767, 773, 1051, 1069, 1084, 1108, 1109, 1110, 1118, 1120, 1122, 1131, 1150, 1165, 1166, 1169, 1179, 1182, 1185, 1195, 1196], "intent": [1, 1169, 1195], "languag": [1, 375, 382, 407, 413, 419, 439, 442, 615, 616, 1106, 1108, 1113, 1118, 1122, 1129, 1138, 1169, 1173, 1185, 1195], "unintent": 1, "version": [1, 2, 155, 165, 396, 439, 675, 697, 719, 731, 837, 844, 856, 884, 920, 1109, 1112, 1119, 1122, 1131, 1169, 1174, 1185], "freedom": 1, "littl": [1, 1131, 1142], "disallow": 1, "suit": [1, 1108, 1121], "qc": [1, 1134, 1184], "dashboard": 1, "aim": [1, 1102, 1109, 1195], "conveni": [1, 1104, 1108, 1110, 1169], "certain": [1, 1104, 1112, 1169], "ol": [1, 1104, 1108, 1115, 1130, 1138, 1139, 1154, 1167, 1169], "roughli": [1, 1119], "adher": [1, 1108, 1134], "welcom": [2, 1102, 1103, 1105, 1130], "tracker": [2, 1102, 1122], "bug": [2, 1103, 1121, 1147], "enhanc": [2, 1125], "tutori": [2, 1105, 1113, 1119, 1127, 1129, 1131, 1132, 1135, 1137, 1165, 1196], "resid": 2, "folder": [2, 1102, 1104, 1126, 1131, 1137, 1151, 1162], "build": [2, 265, 281, 287, 310, 333, 350, 1108, 1120, 1128, 1130, 1165, 1183], "live": [2, 478, 482, 490, 501, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 615, 1126], "diataxi": 2, "rst": 2, "md": [2, 1104], "docstr": [2, 1104], "read": [2, 1106, 1111, 1113, 1138], "architectur": [2, 1105, 1129, 1131, 1167], "best": [2, 1107, 1120, 1125, 1168, 1185], "practic": [2, 1107, 1109, 1115, 1117, 1118, 1120, 1169, 1195], "sooner": 2, "mark": [2, 1117, 1119], "draft": 2, "readi": [2, 1126, 1130], "review": [2, 1115, 1125], "sure": [2, 1128, 1131], "unit": [2, 265, 280, 281, 287, 310, 323, 332, 333, 350, 367, 1104], "print": [2, 1101, 1109, 1112, 1116, 1117, 1118, 1119, 1128, 1132, 1133, 1139, 1142, 1143, 1147, 1150, 1156, 1158, 1160, 1161, 1168, 1169, 1170, 1171, 1173, 1174, 1175, 1179, 1183, 1195], "ing": 2, "log": [2, 782, 783, 1120], "diagnost": [2, 1120], "captur": [2, 374, 439, 445, 1110, 1169], "see": [2, 203, 250, 744, 814, 1101, 1104, 1106, 1107, 1108, 1109, 1110, 1111, 1112, 1113, 1114, 1116, 1119, 1120, 1121, 1125, 1126, 1127, 1128, 1131, 1133, 1134, 1136, 1141, 1142, 1143, 1145, 1147, 1155, 1158, 1159, 1166, 1168, 1169, 1171, 1174, 1175, 1177, 1179, 1181, 1182, 1183, 1184, 1185, 1186, 1190, 1196], "exemplar": 2, "regist": [2, 420], "scheme": [2, 1128, 1156, 1163, 1165, 1167], "__init__": [2, 1158, 1159, 1164, 1166], "py": [2, 814, 1132, 1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "__post_init__": [2, 1128], "cli": [2, 1104, 1122, 1125, 1131, 1143, 1185, 1195], "refactor": 2, "substanti": 2, "ad": [2, 214, 229, 236, 1109, 1114, 1115, 1119, 1125, 1128, 1138, 1139, 1140], "diff": [2, 4, 42, 46, 56, 72, 91, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 204, 817, 830, 842, 844, 865, 881, 882, 884, 1108, 1129, 1171, 1173, 1177], "coordin": 2, "advanc": [2, 1104, 1108, 1109, 1114, 1119, 1130, 1137, 1153, 1169, 1183], "dev": [2, 1137], "environ": [2, 1111, 1125, 1131], "test_implement": 2, "test_util": 2, "author": 2, "makefil": 2, "set": [2, 3, 4, 17, 21, 22, 30, 36, 42, 45, 46, 66, 67, 78, 79, 82, 83, 87, 88, 120, 127, 215, 236, 240, 383, 390, 391, 395, 424, 425, 427, 434, 436, 437, 439, 445, 455, 462, 472, 473, 768, 777, 778, 782, 793, 794, 799, 804, 809, 844, 859, 884, 911, 943, 951, 955, 959, 963, 964, 1057, 1060, 1069, 1072, 1086, 1095, 1104, 1106, 1108, 1111, 1112, 1115, 1118, 1119, 1120, 1125, 1131, 1132, 1133, 1138, 1142, 1143, 1151, 1162, 1168, 1169, 1170, 1173, 1174, 1175, 1177, 1180, 1181, 1182, 1184, 1195], "vx": 2, "click": [2, 1143], "button": 2, "tweak": 2, "emphasi": 2, "titl": [2, 535, 615, 837, 884], "githu": 2, "clear": [2, 1109], "concis": [2, 1128], "changelog": 2, "goe": 2, "trigger": [2, 1162], "publish": [2, 478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 619, 1128], "fail": [2, 1161], "fix": [2, 1103, 1169, 1184], "delet": [2, 1107, 1117, 1139, 1169], "again": [2, 1131], "gener": [3, 4, 23, 30, 31, 36, 37, 42, 43, 46, 49, 53, 61, 66, 67, 68, 76, 77, 79, 80, 84, 86, 87, 88, 89, 92, 95, 117, 127, 214, 236, 249, 251, 281, 296, 323, 333, 357, 374, 407, 439, 442, 445, 452, 474, 475, 477, 497, 719, 737, 830, 842, 844, 884, 891, 922, 943, 968, 1103, 1105, 1108, 1110, 1111, 1113, 1119, 1120, 1121, 1125, 1126, 1129, 1131, 1133, 1134, 1135, 1138, 1143, 1145, 1160, 1166, 1168, 1171, 1175, 1177, 1180, 1182, 1183, 1184, 1195, 1196], "oa": [3, 4, 17, 22, 23, 61, 86, 980, 990, 1022, 1168], "annot": [3, 31, 46, 204, 374, 375, 382, 383, 384, 386, 387, 390, 391, 396, 398, 405, 406, 407, 413, 419, 422, 426, 428, 429, 439, 445, 448, 466, 469, 476, 477, 483, 487, 509, 615, 640, 650, 826, 829, 840, 844, 884, 980, 990, 991, 992, 1000, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1017, 1020, 1021, 1022, 1023, 1024, 1027, 1063, 1101, 1105, 1108, 1109, 1111, 1113, 1117, 1120, 1122, 1128, 1129, 1139, 1151, 1154, 1167, 1168, 1169, 1170, 1173, 1174, 1176, 1195], "positiveornegativeassoci": [3, 4, 17, 21, 23, 30, 37, 41, 43, 46, 53, 61, 66, 67, 68, 76, 77, 79, 80, 84, 86, 87, 88, 89, 92], "uriorcuri": [3, 4, 17, 20, 21, 22, 23, 24, 30, 36, 43, 44, 46, 55, 56, 61, 62, 64, 66, 70, 72, 73, 74, 75, 76, 79, 84, 86, 87, 92, 95, 121, 127, 144, 165, 214, 219, 225, 229, 230, 234, 235, 236, 247, 249, 271, 278, 281, 288, 290, 320, 330, 333, 353, 361, 439, 478, 482, 490, 505, 511, 514, 516, 523, 524, 532, 535, 537, 542, 543, 544, 547, 598, 610, 615, 670, 674, 694, 695, 709, 713, 719, 745, 767, 768, 773, 782, 789, 793, 795, 805, 818, 819, 866, 884, 938, 941, 942, 943, 944, 954, 955, 966, 993, 1001, 1003, 1016, 1030, 1043, 1045, 1057, 1068, 1069], "predic": [3, 4, 17, 22, 23, 36, 38, 42, 46, 49, 51, 56, 66, 67, 72, 87, 88, 142, 155, 165, 167, 172, 173, 174, 175, 183, 190, 191, 193, 199, 201, 271, 281, 313, 318, 320, 333, 346, 354, 375, 382, 386, 388, 405, 407, 413, 414, 419, 423, 439, 452, 457, 481, 487, 553, 615, 827, 844, 859, 876, 878, 884, 890, 914, 938, 943, 955, 1037, 1045, 1062, 1069, 1101, 1102, 1104, 1108, 1109, 1110, 1112, 1115, 1116, 1119, 1120, 1121, 1126, 1130, 1133, 1137, 1147, 1158, 1165, 1168, 1169, 1170, 1175, 1178, 1180, 1181, 1195], "relationship": [3, 17, 22, 23, 41, 46, 76, 77, 142, 155, 165, 184, 214, 229, 264, 271, 278, 279, 281, 286, 288, 290, 291, 309, 320, 330, 331, 333, 349, 353, 361, 364, 386, 390, 439, 445, 448, 449, 450, 452, 464, 827, 938, 943, 954, 955, 956, 959, 1102, 1108, 1110, 1111, 1112, 1113, 1129, 1130, 1132, 1134, 1137, 1139, 1161, 1169, 1173, 1175, 1178, 1181], "ontologi": [3, 17, 22, 23, 24, 31, 41, 44, 46, 61, 68, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 204, 250, 264, 265, 271, 278, 279, 280, 281, 282, 283, 286, 287, 288, 289, 290, 291, 292, 309, 310, 320, 330, 331, 332, 333, 335, 336, 349, 350, 353, 358, 361, 364, 366, 374, 375, 382, 383, 384, 386, 387, 390, 391, 395, 396, 398, 405, 407, 413, 419, 420, 422, 426, 428, 429, 437, 438, 439, 443, 445, 450, 458, 466, 469, 470, 476, 477, 478, 482, 487, 490, 497, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 523, 524, 529, 532, 537, 542, 543, 544, 547, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 606, 608, 610, 611, 612, 613, 614, 619, 627, 629, 637, 642, 644, 648, 649, 657, 660, 662, 666, 667, 668, 669, 670, 674, 675, 697, 719, 730, 737, 744, 814, 815, 818, 829, 830, 841, 842, 844, 847, 849, 850, 851, 853, 854, 856, 857, 858, 859, 862, 863, 865, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 883, 884, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 900, 901, 904, 905, 907, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 941, 943, 944, 948, 954, 955, 956, 970, 1101, 1105, 1108, 1109, 1110, 1112, 1113, 1115, 1116, 1117, 1119, 1120, 1121, 1122, 1125, 1128, 1130, 1131, 1132, 1133, 1134, 1139, 1143, 1145, 1147, 1151, 1153, 1154, 1158, 1161, 1162, 1165, 1166, 1167, 1168, 1170, 1171, 1173, 1174, 1175, 1176, 1177, 1179, 1180, 1181, 1182, 1183, 1184, 1189], "property_valu": [3, 17, 22, 23, 46, 1182], "propertyvalu": [3, 17, 22, 46, 61, 76, 80, 374, 375, 382, 383, 384, 386, 387, 390, 391, 395, 396, 398, 405, 413, 414, 419, 439, 442, 445, 452, 474, 475, 477, 1110], "pair": [3, 17, 22, 42, 46, 80, 150, 155, 159, 164, 165, 182, 185, 200, 481, 615, 640, 650, 1057, 1069, 1086, 1095, 1102, 1108, 1115, 1119, 1120, 1125, 1168, 1169, 1176, 1180, 1181], "subject_label": [3, 17, 22, 41, 46, 767, 782, 980, 990, 1003, 1112, 1116, 1131, 1137, 1168], "label": [3, 17, 22, 41, 46, 68, 77, 89, 95, 122, 127, 155, 165, 170, 173, 175, 179, 181, 184, 188, 191, 193, 196, 199, 225, 313, 323, 333, 340, 359, 365, 390, 398, 412, 414, 439, 443, 478, 480, 482, 487, 490, 503, 505, 507, 509, 511, 514, 523, 528, 531, 532, 534, 537, 542, 543, 547, 567, 600, 602, 603, 608, 615, 664, 696, 697, 719, 728, 766, 767, 775, 782, 797, 807, 815, 884, 938, 941, 942, 944, 955, 1101, 1106, 1108, 1109, 1111, 1112, 1113, 1117, 1119, 1125, 1126, 1129, 1131, 1132, 1133, 1137, 1139, 1142, 1143, 1144, 1145, 1146, 1147, 1148, 1150, 1156, 1161, 1162, 1168, 1169, 1170, 1173, 1175, 1177, 1179, 1183, 1196], "predicate_label": [3, 17, 22, 41, 46, 1112, 1137], "negat": [3, 17, 21, 22, 30, 37, 43, 46, 61, 66, 67, 68, 76, 77, 78, 79, 80, 84, 86, 87, 88, 89, 92, 1110], "evid": [3, 17, 22, 43, 46, 487, 615, 1108, 1110], "supporting_object": [3, 17, 22, 46], "aggregator_knowledge_sourc": [3, 4, 17, 21, 22, 46, 1185], "subject_closur": [3, 17, 22, 46], "via": [3, 17, 22, 46, 66, 67, 87, 88, 1101, 1104, 1107, 1108, 1110, 1111, 1115, 1116, 1118, 1119, 1122, 1131, 1137, 1138, 1157, 1165, 1168, 1176, 1179, 1195], "th": [3, 4, 17, 22, 42, 46, 383, 437, 439, 445, 455, 991, 1003], "subject_closure_label": [3, 17, 22, 46], "object_closur": [3, 17, 22, 46], "object_closure_label": [3, 17, 22, 46], "rollupgroup": [3, 32, 44, 46, 85], "pairwisecoassoci": [3, 33, 46, 57, 58, 59, 60, 62, 63, 64, 65, 81, 90, 1168], "associations_for_subjects_in_common": [3, 20, 46], "self": [3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 96, 155, 159, 214, 215, 219, 225, 251, 252, 264, 265, 266, 267, 271, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 511, 514, 523, 524, 528, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 679, 694, 695, 697, 698, 745, 763, 766, 767, 768, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 938, 941, 942, 943, 944, 980, 990, 991, 992, 993, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1057, 1060, 1061, 1062, 1170, 1175], "ontoassoc": [3, 4, 17, 20, 21, 22, 23, 24, 32, 33, 34, 35, 36, 38, 39, 40, 41, 42, 43, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 62, 63, 64, 65, 66, 67, 69, 70, 71, 72, 78, 80, 81, 82, 83, 85, 87, 88, 90, 91, 92], "from_schema": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 326, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 399, 404, 405, 406, 407, 408, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 497, 499, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 520, 521, 522, 523, 524, 528, 529, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 678, 679, 687, 694, 695, 696, 697, 698, 700, 706, 707, 708, 709, 710, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 763, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 924, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 995, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1053, 1057, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099], "slot_usag": [3, 17, 382, 396, 413, 419, 478, 487, 490, 511, 534, 535, 537, 1050, 1061], "domain_of": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 36, 37, 43, 44, 45, 47, 48, 49, 50, 51, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 155, 159, 163, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 214, 215, 219, 225, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 264, 265, 266, 267, 271, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 481, 482, 487, 490, 491, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 523, 524, 529, 532, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 561, 562, 563, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 575, 577, 578, 579, 580, 581, 582, 584, 585, 586, 587, 588, 589, 590, 591, 593, 594, 595, 596, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 629, 637, 638, 639, 640, 646, 647, 648, 649, 650, 651, 654, 657, 659, 660, 661, 662, 663, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 679, 694, 695, 697, 698, 706, 707, 708, 709, 710, 711, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 801, 802, 803, 804, 805, 806, 807, 808, 809, 815, 817, 818, 819, 827, 830, 837, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 865, 866, 867, 868, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 881, 882, 883, 885, 887, 888, 889, 890, 891, 892, 894, 895, 896, 897, 898, 899, 900, 901, 903, 904, 905, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1057, 1060, 1061, 1062, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099], "equals_express": [3, 17, 505, 528, 534, 767, 801, 826, 829, 840, 844, 851], "class_uri": [3, 214, 219, 225, 251, 252, 296, 297, 374, 387, 388, 390, 398, 404, 412, 414, 478, 482, 486, 487, 490, 511, 514, 523, 532, 535, 537, 539, 542, 544, 815, 818, 837, 943, 944, 990, 1061, 1062], "induc": [3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 96, 155, 159, 214, 215, 219, 225, 251, 252, 264, 265, 266, 267, 271, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 511, 514, 523, 524, 528, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 679, 694, 695, 697, 698, 745, 763, 766, 767, 768, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 938, 941, 942, 943, 944, 980, 990, 991, 992, 993, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1057, 1060, 1061, 1062], "ontolog": [3, 4, 17, 22, 23, 61, 86, 1108, 1116], "descriptor": [3, 4, 17, 22, 23, 31, 46, 61, 86, 1108, 1111, 1168, 1185], "exact_map": [3, 4, 17, 22, 23, 61, 73, 74, 75, 86, 150, 375, 407, 413, 419, 477, 478, 482, 487, 490, 505, 507, 509, 510, 511, 514, 523, 532, 535, 537, 542, 543, 547, 552, 553, 554, 555, 577, 591, 595, 607, 627, 628, 662, 667, 942, 980, 990, 1013, 1014, 1020, 1021, 1022, 1023, 1037, 1053, 1062, 1071], "hasbodi": [3, 4, 17, 22, 86, 980, 990, 1022], "1000": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 326, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 399, 404, 405, 406, 407, 408, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 482, 487, 490, 491, 497, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 520, 521, 522, 523, 524, 529, 532, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 678, 679, 687, 694, 695, 696, 697, 698, 700, 706, 707, 708, 709, 710, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 819, 827, 830, 837, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 924, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 995, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1053, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1183], "owner": [3, 4, 17, 20, 21, 22, 23, 24, 45, 78, 94, 95, 96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 155, 159, 163, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 214, 215, 219, 225, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 264, 265, 266, 267, 271, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 424, 425, 427, 436, 446, 454, 462, 472, 473, 478, 481, 482, 487, 490, 491, 504, 505, 506, 507, 508, 509, 510, 511, 514, 523, 524, 532, 535, 537, 538, 539, 542, 543, 544, 547, 679, 694, 695, 697, 698, 706, 707, 708, 709, 710, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 766, 767, 768, 781, 786, 787, 788, 789, 790, 791, 792, 803, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 865, 866, 867, 868, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 885, 887, 888, 889, 890, 891, 892, 894, 895, 896, 897, 898, 899, 900, 901, 903, 904, 905, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1057, 1060, 1061, 1062, 1064, 1065, 1066, 1067, 1068, 1072, 1073, 1074, 1076, 1077, 1080, 1081, 1082, 1083, 1085, 1089, 1090, 1091, 1092, 1093, 1094, 1096, 1098, 1099], "associationchang": [3, 17, 21, 22, 30, 34, 36, 42, 46, 47, 48, 49, 50, 51, 54, 55, 56, 69, 70, 71, 72, 79, 82, 83, 84, 86, 91], "slot_group": [3, 4, 17, 22, 23, 61, 76, 86, 826, 829, 840, 844, 849, 850, 851, 857, 858, 859, 862, 863, 870, 871, 872, 874, 875, 876, 878, 879, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 901, 905, 907, 910, 913, 914, 917], "core_tripl": [3, 4, 17, 22, 23, 46, 61, 76, 86], "hastarget": [3, 17, 22, 23, 61], "mixin": [3, 4, 17, 22, 46, 47, 48, 49, 50, 51, 54, 55, 56, 68, 69, 70, 71, 72, 77, 82, 83, 89, 155, 168, 169, 170, 172, 173, 177, 178, 179, 183, 187, 188, 190, 191, 195, 196, 201, 490, 512, 513, 529, 532, 543, 547, 552, 586, 587, 588, 600, 602, 603, 608, 615, 631, 656, 990], "denormalized_slot": [3, 17, 22, 46, 68, 77, 89], "parserconfigur": [3, 4, 17, 22, 30, 45, 46, 78, 79], "inherit": [4, 19, 20, 21, 23, 24, 94, 95, 96, 109, 153, 155, 159, 214, 215, 219, 222, 225, 252, 264, 265, 270, 271, 297, 309, 310, 313, 314, 317, 318, 319, 320, 323, 324, 386, 388, 390, 391, 396, 398, 401, 404, 412, 414, 481, 486, 487, 528, 533, 534, 679, 693, 694, 695, 697, 698, 745, 762, 766, 815, 817, 818, 819, 827, 836, 837, 841, 937, 943, 980, 986, 991, 992, 993, 1047, 1048, 1057, 1060, 1109], "summary_group": [4, 46], "publication_is_ad": [4, 42, 46], "wa": [4, 39, 40, 42, 46, 49, 51, 52, 82, 478, 482, 490, 501, 505, 508, 511, 514, 523, 532, 537, 542, 543, 547, 574, 598, 615, 697, 719, 729, 740, 819, 841, 884, 897, 921, 1104, 1111, 1117], "prese": [4, 42, 46], "publication_is_delet": [4, 42, 46], "presen": [4, 42, 46], "old_pred": [4, 42, 46, 76], "new_pred": [4, 42, 46, 76], "old_object": [4, 42, 46, 61], "new_object": [4, 42, 46, 61], "old_object_obsolet": [4, 42, 46], "is_migr": [4, 42, 46], "is_gener": [4, 42, 46], "is_speci": [4, 42, 46], "is_creat": [4, 42, 46], "is_delet": [4, 42, 46], "closure_pred": [4, 46], "sp": [4, 46, 1063], "closure_delta": [4, 46], "integ": [4, 20, 34, 46, 57, 58, 59, 60, 95, 110, 118, 119, 124, 127, 132, 134, 135, 154, 165, 219, 236, 245, 281, 333, 439, 615, 633, 635, 636, 695, 697, 698, 719, 724, 734, 735, 755, 782, 817, 826, 827, 829, 840, 844, 849, 850, 851, 857, 860, 861, 862, 863, 869, 870, 871, 872, 875, 879, 880, 884, 885, 888, 892, 894, 895, 896, 898, 900, 901, 905, 907, 910, 911, 913, 917, 918, 955, 987, 991, 1003, 1006, 1037, 1060, 1067, 1069, 1072, 1074], "diff_slot": [4, 40, 46, 47, 48, 49, 50, 51, 54, 55, 56, 61, 69, 70, 71, 72, 76, 82, 83], "been": [4, 50, 71, 1110, 1116, 1117, 1133, 1134, 1158], "obsolet": [4, 50, 71, 478, 482, 487, 490, 505, 508, 511, 514, 523, 528, 532, 534, 537, 542, 543, 547, 569, 570, 580, 615, 844, 871, 872, 884, 892, 895, 896, 1113, 1129, 1138, 1169, 1173, 1177], "migrat": [4, 49, 50, 51, 1138], "binari": [5, 46, 93, 127, 136, 165, 205, 236, 253, 281, 298, 333, 376, 439, 488, 615, 677, 719, 746, 782, 816, 884, 923, 955, 972, 1003, 1029, 1069], "xsd": [5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 25, 26, 27, 28, 29, 46, 93, 97, 98, 100, 101, 102, 103, 104, 105, 106, 107, 110, 112, 113, 114, 115, 116, 127, 136, 137, 138, 140, 141, 143, 145, 146, 147, 148, 149, 151, 156, 157, 158, 160, 161, 162, 165, 205, 206, 207, 209, 210, 211, 212, 213, 217, 218, 220, 223, 224, 226, 227, 228, 236, 253, 254, 255, 257, 258, 259, 260, 261, 262, 263, 268, 272, 273, 274, 276, 277, 281, 298, 299, 300, 302, 303, 304, 305, 306, 307, 308, 315, 321, 322, 325, 327, 328, 333, 376, 377, 378, 380, 381, 385, 389, 392, 393, 394, 397, 402, 410, 411, 415, 416, 417, 418, 420, 439, 461, 488, 489, 492, 493, 495, 496, 498, 500, 515, 516, 517, 518, 519, 525, 526, 540, 541, 545, 546, 548, 549, 550, 615, 677, 680, 681, 683, 684, 685, 686, 688, 689, 690, 691, 699, 701, 702, 703, 704, 705, 714, 715, 716, 717, 719, 723, 746, 747, 748, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 761, 764, 765, 769, 770, 771, 772, 782, 816, 820, 821, 823, 824, 825, 826, 828, 829, 831, 832, 833, 834, 838, 839, 840, 843, 845, 846, 860, 861, 880, 884, 923, 925, 926, 928, 929, 930, 931, 932, 933, 934, 935, 939, 940, 945, 946, 947, 955, 972, 973, 974, 976, 977, 978, 979, 981, 982, 983, 984, 987, 988, 989, 994, 996, 997, 1003, 1029, 1031, 1032, 1034, 1035, 1036, 1038, 1039, 1040, 1041, 1044, 1054, 1055, 1056, 1058, 1059, 1069, 1118, 1195], "bool": [5, 93, 136, 205, 253, 298, 376, 488, 677, 746, 816, 923, 972, 1029, 1144, 1146, 1147, 1148, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1196], "repr": [5, 6, 7, 8, 9, 14, 15, 16, 18, 19, 25, 27, 28, 29, 93, 97, 98, 99, 100, 105, 106, 107, 108, 109, 112, 114, 115, 116, 136, 137, 138, 139, 140, 144, 147, 148, 151, 152, 153, 157, 160, 161, 162, 205, 206, 207, 208, 209, 217, 218, 220, 221, 222, 223, 226, 227, 228, 253, 254, 255, 256, 257, 262, 263, 268, 269, 270, 272, 274, 276, 277, 298, 299, 300, 301, 302, 307, 308, 315, 316, 317, 321, 325, 327, 328, 376, 377, 378, 379, 380, 393, 394, 397, 400, 401, 410, 416, 417, 418, 488, 492, 493, 494, 495, 516, 517, 518, 526, 527, 533, 540, 546, 549, 550, 677, 680, 681, 682, 683, 689, 690, 691, 692, 693, 701, 703, 704, 705, 746, 747, 748, 749, 750, 756, 757, 758, 760, 762, 764, 769, 770, 771, 816, 820, 821, 822, 823, 832, 833, 834, 835, 836, 838, 843, 845, 846, 923, 925, 926, 927, 928, 933, 934, 935, 936, 937, 939, 945, 946, 947, 972, 973, 974, 975, 976, 982, 983, 984, 985, 986, 988, 994, 996, 997, 1029, 1031, 1032, 1033, 1034, 1040, 1041, 1044, 1046, 1047, 1054, 1056, 1058, 1059], "compact": [6, 46, 97, 127, 137, 165, 206, 236, 254, 281, 299, 333, 377, 439, 492, 615, 680, 719, 747, 782, 820, 884, 925, 955, 973, 1003, 1031, 1069, 1108, 1115, 1119, 1131], "str": [6, 7, 8, 9, 14, 15, 16, 18, 19, 25, 26, 27, 28, 29, 97, 98, 99, 100, 105, 106, 107, 108, 109, 112, 113, 114, 115, 116, 137, 138, 139, 140, 144, 147, 148, 149, 151, 152, 153, 156, 157, 158, 160, 161, 162, 206, 207, 208, 209, 217, 218, 220, 221, 222, 223, 224, 226, 227, 228, 254, 255, 256, 257, 262, 263, 268, 269, 270, 272, 273, 274, 276, 277, 299, 300, 301, 302, 307, 308, 315, 316, 317, 321, 322, 325, 327, 328, 377, 378, 379, 380, 393, 394, 397, 400, 401, 402, 410, 411, 415, 416, 417, 418, 420, 489, 492, 493, 494, 495, 516, 517, 518, 519, 525, 526, 527, 533, 540, 541, 545, 546, 548, 549, 550, 680, 681, 682, 683, 689, 690, 691, 692, 693, 699, 701, 702, 703, 704, 705, 747, 748, 749, 750, 756, 757, 758, 760, 762, 764, 765, 769, 770, 771, 820, 821, 822, 823, 832, 833, 834, 835, 836, 838, 839, 843, 845, 846, 925, 926, 927, 928, 933, 934, 935, 936, 937, 939, 940, 945, 946, 947, 973, 974, 975, 976, 982, 983, 984, 985, 986, 988, 989, 994, 996, 997, 1031, 1032, 1033, 1034, 1040, 1041, 1044, 1046, 1047, 1054, 1055, 1056, 1058, 1059, 1132, 1144, 1146, 1147, 1148, 1156, 1157, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1196], "year": [7, 46, 98, 127, 138, 165, 207, 236, 255, 281, 300, 333, 378, 439, 493, 615, 681, 719, 748, 782, 821, 884, 926, 955, 974, 1003, 1032, 1069], "month": [7, 46, 98, 127, 138, 165, 207, 236, 255, 281, 300, 333, 378, 439, 493, 615, 681, 719, 748, 782, 821, 884, 926, 955, 974, 1003, 1032, 1069], "ideal": [7, 46, 98, 127, 138, 165, 207, 236, 255, 281, 300, 333, 378, 439, 493, 615, 681, 719, 748, 782, 821, 884, 926, 955, 974, 1003, 1032, 1069], "calendar": [7, 46, 98, 127, 138, 165, 207, 236, 255, 281, 300, 333, 378, 439, 493, 615, 681, 719, 748, 782, 821, 884, 926, 955, 974, 1003, 1032, 1069], "xsddate": [7, 98, 138, 207, 255, 300, 378, 493, 681, 748, 821, 926, 974, 1032], "datetim": [8, 46, 99, 127, 139, 165, 208, 236, 256, 281, 301, 333, 379, 439, 494, 615, 682, 719, 749, 782, 822, 841, 877, 884, 909, 927, 955, 975, 1003, 1033, 1069], "xsddatetim": [9, 100, 140, 209, 257, 302, 380, 495, 683, 750, 823, 928, 976, 1034], "real": [10, 11, 12, 46, 101, 102, 103, 127, 141, 143, 145, 165, 210, 211, 212, 236, 258, 259, 260, 281, 303, 304, 305, 333, 381, 385, 389, 439, 496, 498, 500, 615, 684, 685, 686, 719, 751, 752, 753, 782, 824, 825, 828, 884, 929, 930, 931, 955, 977, 978, 979, 1003, 1035, 1036, 1038, 1069], "precis": [10, 46, 101, 127, 141, 165, 210, 236, 258, 281, 303, 333, 381, 439, 496, 615, 684, 719, 751, 782, 824, 884, 929, 955, 977, 1003, 1035, 1069, 1109, 1119, 1125], "float": [11, 20, 35, 46, 81, 94, 95, 102, 125, 126, 127, 128, 129, 130, 131, 143, 165, 211, 236, 259, 281, 304, 314, 318, 333, 342, 373, 385, 439, 498, 615, 685, 719, 745, 752, 759, 761, 767, 768, 772, 777, 778, 779, 782, 825, 884, 930, 955, 978, 990, 1000, 1003, 1036, 1042, 1065, 1069, 1165, 1168, 1175, 1180], "int": [13, 104, 110, 146, 154, 213, 261, 306, 392, 515, 688, 754, 755, 831, 932, 981, 987, 1039, 1160, 1165, 1168, 1175, 1182, 1185], "path": [14, 25, 46, 105, 112, 127, 147, 155, 157, 165, 190, 217, 223, 236, 262, 272, 281, 307, 321, 333, 393, 410, 439, 517, 540, 615, 689, 694, 701, 713, 719, 738, 742, 756, 764, 782, 832, 838, 884, 933, 939, 955, 982, 988, 1003, 1040, 1054, 1069, 1108, 1119, 1128, 1131, 1137, 1156, 1161, 1162, 1163, 1165, 1169, 1172, 1173, 1175, 1185], "derefer": [14, 15, 25, 105, 106, 112, 147, 148, 157, 217, 218, 223, 262, 263, 272, 307, 308, 321, 393, 394, 410, 517, 518, 540, 689, 690, 701, 756, 757, 764, 832, 833, 838, 933, 934, 939, 982, 983, 988, 1040, 1041, 1054], "zero": [14, 25, 105, 112, 147, 157, 217, 223, 262, 272, 307, 321, 393, 410, 517, 540, 689, 701, 756, 764, 832, 838, 933, 939, 982, 988, 1040, 1054, 1112, 1119, 1169], "valid": [14, 15, 25, 105, 106, 112, 147, 148, 157, 204, 217, 218, 223, 262, 263, 272, 307, 308, 321, 384, 393, 394, 404, 410, 454, 517, 518, 540, 689, 690, 701, 756, 757, 764, 832, 833, 838, 933, 934, 939, 982, 983, 988, 1037, 1040, 1041, 1042, 1048, 1054, 1057, 1060, 1061, 1062, 1064, 1065, 1066, 1067, 1070, 1071, 1072, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1100, 1101, 1104, 1122, 1128, 1129, 1130, 1154, 1167, 1173, 1176, 1178], "tree": [14, 15, 105, 106, 147, 148, 217, 218, 262, 263, 307, 308, 393, 394, 517, 518, 689, 690, 756, 757, 832, 833, 933, 934, 982, 983, 1040, 1041, 1102, 1104, 1130, 1134], "pointer": [15, 46, 106, 127, 148, 165, 218, 236, 263, 281, 308, 333, 394, 439, 518, 615, 690, 719, 757, 782, 833, 884, 934, 955, 983, 1003, 1041, 1069], "prefix": [16, 46, 107, 127, 151, 165, 220, 236, 268, 281, 315, 323, 324, 333, 390, 391, 397, 404, 437, 439, 445, 446, 526, 615, 691, 719, 758, 782, 834, 837, 844, 884, 889, 891, 935, 955, 984, 1003, 1044, 1069, 1108, 1113, 1117, 1118, 1120, 1125, 1147, 1168, 1169, 1174, 1182, 1185, 1196], "curi": [16, 18, 19, 29, 46, 107, 108, 109, 116, 127, 151, 152, 153, 162, 165, 219, 220, 221, 222, 225, 228, 232, 236, 268, 269, 270, 277, 281, 315, 316, 317, 328, 333, 390, 391, 397, 400, 401, 402, 418, 420, 439, 455, 489, 526, 527, 533, 548, 550, 615, 691, 692, 693, 697, 705, 719, 727, 758, 760, 762, 771, 782, 834, 835, 836, 846, 884, 935, 936, 937, 938, 941, 942, 944, 947, 954, 955, 984, 985, 986, 997, 1003, 1044, 1046, 1047, 1059, 1069, 1106, 1108, 1109, 1110, 1111, 1113, 1116, 1119, 1121, 1129, 1131, 1132, 1138, 1139, 1143, 1144, 1147, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "bnode": [18, 46, 108, 127, 152, 165, 221, 236, 269, 281, 316, 333, 400, 439, 527, 615, 692, 719, 760, 782, 835, 884, 936, 955, 985, 1003, 1046, 1069], "shex": [18, 19, 108, 109, 152, 153, 221, 222, 269, 270, 316, 317, 400, 401, 527, 533, 692, 693, 760, 762, 835, 836, 936, 937, 985, 986, 1046, 1047], "nonliter": [18, 108, 152, 221, 269, 316, 400, 527, 692, 760, 835, 936, 985, 1046], "iri": [19, 109, 153, 222, 270, 317, 390, 391, 401, 455, 512, 513, 516, 523, 524, 529, 533, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 627, 637, 648, 649, 657, 660, 666, 667, 668, 670, 693, 697, 719, 731, 762, 836, 937, 986, 1047, 1108, 1112, 1176], "elementidentifi": [19, 109, 153, 222, 270, 317, 401, 533, 693, 762, 836, 937, 986, 1047], "object1": [20, 46, 61, 1168], "object2": [20, 46, 61, 1168], "object1_label": [20, 46], "object2_label": [20, 46], "number_subjects_in_common": [20, 46, 1168], "proportion_subjects_in_common": [20, 46], "number_subjects_in_union": [20, 46], "number_subject_unique_to_entity1": [20, 46], "number_subject_unique_to_entity2": [20, 46], "subjects_in_common": [20, 46], "preserve_negated_associ": [21, 46], "parser": [21, 45, 46, 78, 1107], "include_association_attribut": [21, 46], "attr": [21, 46], "resourc": [21, 144, 398, 829, 830, 837, 848, 865, 873, 883, 884, 899, 903, 915, 919, 920, 922, 1037, 1069, 1108, 1112, 1114, 1116, 1121, 1128, 1138, 1147, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "remov": [21, 78, 275, 326, 995, 1138, 1170, 1177, 1181], "defens": [21, 78], "slower": [21, 45], "instanti": [22, 251, 296, 374, 383, 407, 439, 484, 537, 543, 544, 763, 842, 944, 1037, 1045, 1051, 1052, 1062, 1069, 1108, 1142, 1160, 1169, 1185], "negatedassoci": [22, 23, 30, 37, 43, 46, 53, 61, 66, 67, 68, 76, 77, 79, 80, 84, 86, 87, 88, 89, 92], "tag": [23, 46, 61, 76, 214, 236, 242, 388, 395, 826, 829, 840, 844, 849, 851, 857, 858, 859, 862, 863, 864, 870, 871, 872, 875, 876, 878, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 900, 901, 906, 913, 914, 917, 1063, 1109, 1110, 1111, 1116, 1117, 1118, 1169, 1195], "group_object": [24, 46], "ancestor": [24, 44, 46, 767, 773, 775, 782, 1101, 1102, 1104, 1108, 1113, 1120, 1130, 1134, 1135, 1158, 1173, 1175, 1180], "sub_group": [24, 46], "rollup": [24, 46, 85, 1168], "nassoci": [24, 44], "inlined_as_list": [24, 32, 85, 266, 285, 311, 348, 390, 391, 430, 433, 437, 444, 448, 830, 842, 844, 848, 865, 899, 943, 971, 1050, 1051, 1061, 1084], "charact": [26, 46, 113, 127, 158, 165, 224, 236, 273, 275, 281, 322, 326, 333, 411, 439, 541, 615, 702, 719, 765, 782, 839, 884, 940, 955, 989, 995, 1003, 1055, 1069], "independ": [27, 46, 114, 127, 160, 165, 226, 236, 274, 275, 281, 325, 326, 333, 416, 439, 546, 615, 703, 719, 769, 782, 843, 884, 945, 955, 994, 995, 1003, 1056, 1069, 1119], "xsdtime": [27, 114, 160, 226, 274, 325, 416, 546, 703, 769, 843, 945, 994, 1056], "anyuri": [28, 29, 115, 116, 161, 162, 227, 228, 276, 277, 327, 328, 417, 418, 516, 549, 550, 704, 705, 770, 771, 845, 846, 946, 947, 996, 997, 1058, 1059], "liter": [28, 115, 161, 227, 276, 327, 417, 549, 704, 770, 845, 946, 996, 1058, 1108, 1109, 1118, 1126, 1169, 1195], "w3": [31, 46, 154, 1003, 1026, 1112, 1168, 1169], "bioscienc": [31, 46], "aspect": [31, 46, 1110, 1115, 1120, 1138, 1189], "drug": [31, 46], "chemic": [31, 46, 1119], "none": [38, 41, 42, 46, 63, 65, 90, 111, 142, 150, 154, 166, 171, 174, 175, 180, 189, 192, 197, 236, 275, 281, 326, 333, 403, 409, 425, 427, 436, 439, 472, 615, 632, 678, 687, 696, 700, 719, 782, 826, 829, 840, 924, 995, 1003, 1053, 1063, 1069, 1109, 1112, 1117, 1118, 1119, 1131, 1132, 1137, 1139, 1144, 1146, 1147, 1148, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1196], "is_grouping_slot": [38, 864, 886, 893, 902, 906], "last": [40, 46, 52, 275, 326, 995], "modification_d": [40, 46], "creation_d": [40, 46, 478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 615, 652], "domain": [41, 42, 166, 167, 175, 181, 184, 193, 198, 199, 384, 390, 432, 439, 478, 482, 490, 505, 511, 514, 523, 528, 532, 534, 537, 542, 543, 547, 565, 580, 598, 605, 615, 630, 632, 667, 1101, 1108, 1110, 1119, 1138], "pertain": [42, 46], "_an": 44, "_": [44, 155, 404, 1102, 1108, 1111, 1119, 1121, 1147, 1161, 1195], "closure_information_content_delta": 46, "original_object": 46, "normal": [46, 73, 74, 75, 264, 281, 282, 289, 292, 309, 313, 333, 335, 358, 365, 366, 819, 884, 897, 1117, 1125, 1128, 1137, 1153, 1160, 1161, 1164, 1165, 1168, 1169, 1170, 1173, 1174, 1185], "original_pred": 46, "original_subject": 46, "inform": [46, 439, 744, 782, 814, 1069, 1108, 1109, 1110, 1111, 1113, 1114, 1117, 1119, 1128, 1132, 1133, 1135, 1139, 1145, 1166, 1169, 1171, 1180, 1185, 1195], "dateordatetim": [46, 127, 165, 236, 281, 333, 439, 615, 719, 782, 884, 955, 1003, 1069], "decim": [46, 127, 165, 236, 281, 333, 439, 615, 719, 782, 884, 955, 1003, 1069], "doubl": [46, 127, 165, 236, 281, 333, 439, 615, 719, 782, 884, 955, 1003, 1069], "jsonpath": [46, 127, 165, 236, 281, 333, 439, 615, 719, 782, 884, 955, 1003, 1069], "jsonpoint": [46, 127, 165, 236, 281, 333, 439, 615, 719, 782, 884, 955, 1003, 1069], "ncname": [46, 127, 165, 236, 281, 333, 404, 439, 454, 615, 719, 782, 884, 955, 1003, 1069], "nodeidentifi": [46, 127, 165, 236, 281, 333, 439, 615, 719, 782, 884, 955, 1003, 1069], "objectidentifi": [46, 127, 165, 236, 281, 333, 439, 615, 719, 782, 884, 955, 1003, 1069], "sparqlpath": [46, 127, 165, 236, 281, 333, 439, 615, 719, 782, 884, 955, 1003, 1069], "ye": [53, 452, 474, 477, 557, 561, 573, 577, 590, 610, 627, 629, 637, 663, 669, 674, 675, 1084, 1102, 1104], "enrich": [93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 1101, 1125, 1133, 1154, 1167, 1173], "search": [94, 127, 130, 204, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 991, 999, 1002, 1003, 1006, 1009, 1010, 1019, 1027, 1102, 1105, 1111, 1113, 1120, 1125, 1129, 1130, 1137, 1139, 1142, 1150, 1154, 1158, 1162, 1167, 1168, 1169, 1173], "ontoenrich": [94, 95, 96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 129, 130, 131, 132, 133, 134, 135], "p_value_cutoff": [94, 127], "class_id": [95, 127, 1170], "class_label": [95, 127, 1170], "p_valu": [95, 111, 127, 1170], "p_value_adjust": [95, 127, 1170], "adjust": [95, 127, 129, 1170], "false_discovery_r": [95, 127], "discoveri": [95, 125, 127], "rate": [95, 125, 127], "fold_enrich": [95, 127], "fold": [95, 126, 127], "probabl": [95, 127, 782, 783, 1108, 1120, 1180], "estim": [95, 127, 131], "approach": [95, 127, 131, 1101, 1113, 1133, 1143, 1168], "sample_count": [95, 127, 1170], "sample_tot": [95, 127], "background_count": [95, 127, 1170], "count": [95, 118, 127, 817, 827, 881, 882, 884, 1131, 1171, 1175], "background_tot": [95, 127], "ancestor_of_more_informative_result": [95, 127], "previous": [95, 117, 123, 127, 1117, 1131, 1133], "descendant_of_more_informative_result": [95, 127], "classenrichmentresultset": [95, 127, 133], "0000175": [95, 128], "minimum_valu": [95, 131, 1063], "maximum_valu": [95, 131, 1063], "enrichemt": [96, 127, 133], "classenrichmentresult": [96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 131, 132, 133, 134, 135, 1170], "typeof": [110, 144, 149, 156, 214, 229, 402, 415, 420, 489, 516, 519, 525, 545, 548, 699, 755, 759, 761, 772, 987], "sort": [111, 127, 1109, 1117, 1119, 1150, 1169, 1170, 1175, 1179], "permissible_valu": [111, 142, 150, 216, 275, 326, 399, 406, 408, 497, 678, 687, 696, 700, 924, 995, 1053, 1063], "classenrichmentconfigur": [127, 130], "sortfieldenum": 127, "posit": [127, 219, 236, 318, 333, 373, 980, 990, 1003, 1020, 1023, 1131, 1169], "side": [142, 155, 165, 175, 181, 184, 193, 199, 1115, 1170], "morespecificpredicateonright": 142, "lessspecificpredicateonright": 142, "less": [142, 1063, 1108, 1109, 1131, 1163, 1170, 1185, 1195], "leftentailedbyright": 142, "rightentailedbyleft": 142, "indirectformofedgeonright": 142, "ent": 142, "rightnodesareident": 142, "nonentailedrelationship": 142, "norelationship": 142, "missingmap": 142, "missingsubjectmap": 142, "missingobjectmap": 142, "lack": [142, 155, 163, 165, 214, 230, 484, 615, 1106, 1109], "5": [142, 318, 373, 390, 398, 402, 412, 414, 415, 420, 438, 1115, 1118, 1125, 1129, 1130, 1183], "neither": [142, 505, 1169], "nor": [142, 505, 1169], "20": 142, "99": 142, "readabl": [149, 165, 167, 390, 398, 412, 414, 439, 443, 519, 525, 615, 696, 938, 941, 942, 944, 955, 956, 1108, 1119, 1195], "n": [150, 155, 1132], "subject_mapping_cardin": [150, 155, 165], "object_mapping_cardin": [150, 155, 165], "mapping_cardinality_enum": 150, "www": [154, 1003, 1026, 1108, 1112, 1158, 1169, 1195], "2001": 154, "xmlschema": 154, "cross_ontology_diff": 154, "__": [155, 232, 374, 957, 958, 961], "categor": [155, 165, 214, 230, 236], "left_object": [155, 165], "right_object": [155, 165], "right_": 155, "predicate_": 155, "left_subject": [155, 165], "right_subject": [155, 165], "figur": [155, 165, 1119], "classif": [155, 165, 1115, 1119], "xodiff": [155, 159, 163, 166, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 200, 201], "diffcategori": [155, 163, 165], "left_subject_id": [155, 165, 175, 184, 199, 201], "entityrefer": [155, 165, 168, 172, 175, 177, 181, 183, 184, 186, 187, 190, 193, 195, 199, 201], "child": [155, 165, 167, 175, 177, 179, 180, 193, 195, 196, 197, 199, 386, 464, 1169, 1178], "left_object_id": [155, 165, 175, 181, 183, 184, 199], "left_predicate_id": [155, 165, 175, 184], "left_subject_label": [155, 165, 167, 175, 199], "left_object_label": [155, 165, 167, 175, 181], "left_predicate_label": [155, 165, 167, 175, 184], "right_subject_id": [155, 165, 184, 193, 199, 201], "matchabl": [155, 165, 167, 181, 187, 188, 189, 193, 195, 196, 197, 199], "right_object_id": [155, 165, 181, 183, 184, 193, 199], "right_predicate_id": [155, 165, 167, 184, 191, 192, 193], "right_subject_label": [155, 165, 167, 193, 199], "right_object_label": [155, 165, 167, 181, 193], "right_predicate_label": [155, 165, 167, 184, 193], "left_subject_is_funct": [155, 165, 166, 175], "ontol": [155, 165, 166, 175], "left_object_is_funct": [155, 165, 166, 175], "subject_mapping_pred": [155, 165, 184, 199], "hold": [155, 165, 183, 184, 199, 201, 943, 948, 953, 955, 1118, 1121, 1169, 1195], "object_mapping_pred": [155, 165, 184, 199], "right_intermediate_id": [155, 165], "mappingcardinalityenum": [155, 165, 182, 200], "structurediffresultset": [155, 165, 176, 185, 194], "nanoth": 155, "nontologi": 155, "nfor": 155, "nif": 155, "nthe": 155, "ni": 155, "nleft_object": 155, "nleft_subject": 155, "left_sid": [155, 165, 168, 169, 170, 172, 173, 177, 178, 179, 198], "right_sid": [155, 165, 187, 188, 190, 191, 195, 196, 198], "otherrelationship": [155, 190], "is_funct": [155, 165, 169, 178], "act": [156, 165, 700, 841, 847, 884, 1125], "relationaldiff": [159, 163, 165, 168, 169, 170, 172, 173, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 195, 196, 200, 201], "left_sourc": [159, 165], "right_sourc": [159, 165], "map": [164, 165, 204, 236, 439, 615, 814, 884, 1069, 1101, 1104, 1108, 1111, 1113, 1118, 1122, 1129, 1131, 1144, 1147, 1154, 1157, 1158, 1165, 1167, 1168, 1169, 1173, 1175, 1177, 1178, 1179, 1180, 1183, 1184, 1185, 1189, 1195, 1196], "arbitrarili": [165, 175, 193], "ed": 165, "text_annot": [171, 174, 180, 189, 192, 197, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1128, 1183], "definit": [202, 295, 372, 375, 382, 390, 395, 396, 422, 439, 442, 444, 445, 452, 471, 474, 475, 477, 478, 480, 482, 490, 497, 503, 507, 511, 514, 523, 531, 532, 537, 542, 543, 547, 567, 615, 671, 696, 743, 812, 844, 862, 863, 884, 916, 1028, 1097, 1102, 1108, 1111, 1121, 1122, 1132, 1133, 1139, 1147, 1169, 1173, 1175, 1176, 1182, 1184, 1195], "axiom": [203, 204, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 405, 407, 413, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 436, 438, 439, 443, 444, 445, 448, 450, 453, 455, 456, 459, 462, 465, 466, 468, 469, 472, 473, 476, 477, 478, 481, 482, 486, 490, 506, 507, 508, 509, 510, 511, 512, 513, 514, 523, 524, 529, 532, 535, 537, 538, 542, 543, 544, 547, 552, 553, 554, 555, 556, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 575, 577, 578, 579, 580, 582, 584, 585, 586, 588, 589, 590, 591, 593, 594, 595, 596, 598, 599, 600, 601, 602, 603, 604, 605, 608, 609, 610, 611, 612, 614, 615, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 637, 639, 648, 649, 651, 654, 657, 659, 660, 662, 665, 666, 667, 668, 670, 673, 844, 879, 884, 901, 910, 1106, 1108, 1109, 1110, 1111, 1113, 1115, 1116, 1119, 1125, 1134, 1139, 1142, 1165, 1169, 1171, 1176, 1195], "orient": [203, 439, 450, 1101, 1106, 1110, 1132, 1134, 1175], "contrast": [203, 1108, 1134], "intention": [204, 375, 382, 396, 407, 413, 419, 477, 1110, 1134, 1169], "overlap": [204, 1119], "lossi": [204, 1169], "respect": [204, 1119, 1131, 1183], "datatyp": [204, 375, 382, 407, 413, 419, 439, 475, 844, 870, 884, 1108], "enumer": 204, "subset": [204, 390, 396, 448, 478, 482, 486, 490, 504, 511, 512, 513, 514, 523, 528, 529, 532, 534, 535, 537, 543, 544, 547, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 584, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 607, 608, 610, 611, 612, 614, 619, 622, 625, 627, 637, 648, 649, 654, 657, 659, 660, 666, 667, 668, 670, 695, 722, 829, 844, 849, 850, 851, 854, 857, 858, 859, 862, 863, 870, 871, 872, 874, 875, 876, 878, 879, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 900, 901, 905, 907, 910, 911, 913, 914, 917, 918, 1104, 1106, 1108, 1119, 1125, 1138, 1162, 1167, 1168, 1169, 1171, 1173, 1180, 1182], "similar": [204, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 804, 805, 806, 807, 808, 809, 810, 811, 813, 1102, 1108, 1109, 1110, 1113, 1116, 1117, 1125, 1128, 1129, 1134, 1167, 1168, 1173], "statist": [204, 817, 819, 826, 829, 830, 840, 841, 842, 844, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 862, 863, 865, 866, 867, 868, 870, 871, 872, 874, 875, 876, 877, 878, 879, 881, 882, 883, 885, 888, 889, 890, 891, 892, 894, 895, 896, 897, 898, 899, 900, 901, 903, 905, 907, 908, 909, 910, 911, 913, 914, 917, 918, 921, 922, 1120, 1129, 1130, 1167, 1173], "taxon": [204, 829, 855, 941, 943, 944, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 970, 971, 1129, 1160], "constraint": [204, 497, 615, 941, 943, 944, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 1063, 1129, 1169, 1184], "item": [205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 238, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 817, 827, 884, 1139, 1169, 1170, 1180], "list": [205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 375, 382, 384, 390, 391, 396, 405, 407, 413, 419, 421, 422, 423, 426, 430, 432, 434, 437, 439, 444, 456, 466, 467, 469, 477, 695, 718, 782, 991, 999, 1003, 1027, 1101, 1104, 1108, 1109, 1111, 1112, 1115, 1116, 1119, 1121, 1125, 1131, 1133, 1134, 1142, 1143, 1147, 1150, 1156, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1185], "itemlistel": [214, 219, 236], "listitem": [214, 225, 232, 234, 236, 237, 239, 241, 245, 246], "numberofitem": [214, 216, 236], "itemlistordertyp": [214, 236, 244], "itemmetadatamap": [214, 219, 236], "keyword": [214, 230, 236, 1147, 1185], "additionaltyp": [214, 236], "wasgeneratedbi": [214, 236], "script": [214, 236, 249], "itemlistcollect": [214, 236, 240], "close": [214, 375, 396, 407, 408, 413, 419, 477, 490, 1108, 1132, 1140, 1184], "close_map": [214, 375, 407, 413, 419, 477, 478, 482, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 566, 568, 571, 574, 619, 675], "henc": 214, "mtor": 214, "pathwai": [214, 1168], "shop": 214, "bui": 214, "supermarket": 214, "singular_nam": [214, 230, 239, 242], "uncontrol": [214, 230], "dcterm": [214, 230, 478, 482, 487, 490, 504, 505, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 564, 566, 568, 571, 574, 619, 628, 629, 662, 667, 669, 837, 873, 915], "microdata": [214, 229], "rdfa": [214, 229], "better": [214, 229, 1103, 1120, 1131, 1143], "weaker": [214, 229], "itemlist": [215, 219, 225, 229, 230, 231, 232, 233, 234, 235, 236, 239, 241, 242, 243, 244, 247, 248, 249, 1170], "catalog": 215, "around": [215, 1106, 1107, 1108, 1109, 1131, 1137, 1175], "ascend": 216, "itemlistorderascend": 216, "descend": [216, 941, 955, 957, 958, 961, 1101, 1102, 1104, 1108, 1110, 1120, 1125, 1134, 1137, 1168, 1170, 1173, 1175], "itemlistorderdescend": 216, "unord": 216, "itemlistunord": 216, "enum_uri": 216, "elementid": [219, 236], "idtyp": [219, 236], "previousitem": [219, 236], "previou": [219, 236, 246, 1119, 1131], "proper": [219, 225, 232, 1180], "symbol": [219, 225, 232, 234, 235, 700, 1131, 1185], "url": [225, 236, 420, 487, 548, 615, 1037, 1069, 1108, 1112, 1121, 1147, 1169], "mgi": [225, 235], "lexicaltransformationpipelin": [251, 265, 266, 271, 281, 284, 286, 287, 293, 296, 310, 311, 320, 333, 343, 349, 350, 369], "lexicaltransform": [251, 252, 267, 281, 285, 293, 294, 296, 297, 312, 333, 348, 369, 371], "ontolexindex": [251, 252, 264, 265, 266, 267, 271, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294], "relationshiptoterm": [264, 267, 278, 279, 281, 286, 288, 289, 290, 291, 309, 312, 330, 331, 333, 349, 353, 358, 361, 364], "lexicalindex": [264, 267, 280, 281, 287, 309, 312, 332, 333, 350, 1183], "lexicalgroup": [265, 271, 280, 281, 289, 292, 310, 320, 332, 333, 358, 366], "transform": [266, 267, 275, 281, 284, 285, 294, 311, 312, 326, 333, 343, 348, 371, 995, 1003, 1115], "appli": [266, 267, 275, 281, 284, 285, 293, 294, 311, 312, 313, 323, 326, 333, 343, 348, 351, 369, 371, 391, 439, 819, 884, 897, 943, 955, 967, 995, 1003, 1108, 1117, 1120, 1129, 1130, 1139, 1154, 1177, 1183, 1195], "activ": [266, 267, 281, 311, 312, 333, 841, 847, 877, 884, 909, 921, 1117, 1120, 1131, 1171, 1177], "transformationtyp": [266, 281, 294, 311, 333, 371, 1003], "paramet": [266, 281, 285, 311, 333, 348, 1048, 1060, 1066, 1069, 1072, 1082, 1085, 1096, 1099, 1121, 1130, 1144, 1146, 1147, 1148, 1165, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1196], "fashion": [267, 281, 312, 333, 1108], "element_term": [271, 281, 320, 333], "synonym": [271, 275, 281, 313, 320, 324, 326, 333, 340, 341, 356, 357, 359, 367, 368, 375, 396, 408, 413, 415, 422, 439, 440, 442, 445, 452, 467, 474, 475, 477, 478, 482, 487, 490, 509, 511, 512, 513, 514, 523, 529, 532, 537, 542, 543, 547, 552, 586, 600, 602, 603, 608, 615, 696, 844, 875, 884, 913, 914, 991, 1002, 1003, 1105, 1108, 1111, 1113, 1129, 1139, 1147, 1169, 1179, 1183, 1195], "stem": [275, 326, 995, 1121, 1147], "wo": [275, 326, 995], "lemmat": [275, 326, 995], "contextu": [275, 326, 995, 1109, 1110], "reduct": [275, 326, 995, 1181], "its": [275, 326, 505, 941, 957, 958, 995, 1109, 1111, 1116, 1117, 1121, 1125, 1139, 1185], "wordordernorm": [275, 326, 995], "reorder": [275, 326, 995], "deplur": [275, 326, 995], "plural": [275, 326, 995], "singular": [275, 326, 995], "casenorm": [275, 326, 995], "lowercas": [275, 326, 995], "whitespacenorm": [275, 326, 995], "condens": [275, 326, 995], "white": [275, 326, 995], "termexpanson": [275, 326, 995], "fa": [284, 293, 343, 369], "transf": [285, 294, 348, 371], "mappingrul": [296, 297, 309, 310, 311, 312, 314, 318, 319, 320, 323, 324, 329, 330, 331, 332, 333, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373], "precondit": [313, 329, 333, 339, 344, 345, 346, 351, 355, 362, 363, 365, 370, 505], "postcondit": [313, 329, 333, 346, 352, 354, 365, 373, 505, 528], "onewai": [313, 333], "switch": [313, 333, 346, 1131], "invert": [313, 318, 333, 346, 354], "criteria": [313, 333, 352, 1176], "fire": [313, 333, 352], "condit": [313, 333, 351, 352, 1169, 1174], "mappingrulecollect": [313, 333, 342, 360, 1183], "ifabs": [313, 346], "minimum_confid": [314, 333], "tree_root": 314, "predicate_id": [318, 333, 990, 1003, 1042, 1069, 1116, 1131], "increas": [318, 333, 373, 1109, 1119], "neg": [318, 333, 373, 782, 783, 1175], "decreas": [318, 333, 373], "see_also": [318, 373, 390, 395, 398, 412, 414, 436, 438, 462, 478, 482, 490, 497, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598], "en": [318, 373, 1109, 1118, 1125, 1169, 1195], "wikipedia": [318, 373, 1101, 1120, 1128, 1131, 1174], "wiki": [318, 373, 479, 480], "logit": [318, 373], "upload": [318, 373, 479, 480, 1121, 1147], "wikimedia": [318, 373], "57": [318, 373], "pattern": [319, 333, 339, 344, 345, 355, 362, 363, 370, 478, 505, 511, 528, 534, 545, 1063, 1112, 1121, 1125, 1129, 1131, 1134, 1138, 1143, 1145, 1166, 1168], "subject_source_one_of": [319, 333], "object_source_one_of": [319, 333], "mapping_source_one_of": [319, 333], "subject_match_field_one_of": [319, 333], "object_match_field_one_of": [319, 333], "transformations_included_in": [319, 333], "predicate_id_one_of": [319, 333], "the_rul": [323, 333], "reg": [323, 333, 340, 341, 359], "ex": [323, 333, 340, 341, 359], "match_scop": [323, 333], "scope": [323, 333, 341, 408, 415, 439, 509, 719, 737, 844, 884, 914, 1104, 1117, 1169], "qualifi": [323, 324, 333], "app": [329, 346, 351, 352, 365], "mapping_rules_datamodel": 337, "domainrangeaxiom": [374, 386, 390, 396, 405, 421, 431, 439, 445, 450, 453, 459], "equivalentnodesset": [374, 390, 396, 439, 445, 447, 460], "logicaldefinitionaxiom": [374, 388, 390, 396, 427, 436, 439, 445, 450, 462, 1175], "disjointclassexpressionsaxiom": [374, 388, 396, 424, 425, 439, 445, 472, 473, 1175], "propertychainaxiom": [374, 384, 390, 396, 423, 439, 445, 453, 532, 547, 615, 630], "geneontologi": [374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 1112, 1181, 1195], "alias": [374, 375, 382, 384, 386, 387, 390, 391, 398, 405, 412, 413, 414, 419, 478, 482, 505, 511, 514, 523, 532, 537, 542, 547, 991, 1002, 1003, 1106, 1111, 1113, 1129, 1169, 1174, 1179, 1195], "graphdocu": [374, 375, 382, 383, 384, 386, 387, 390, 395, 396, 398, 404, 405, 407, 413, 419, 437, 439, 445, 450, 455, 1146, 1147, 1148, 1156], "pred": [375, 382, 386, 407, 408, 413, 414, 419, 439, 1106, 1109, 1168], "val": [375, 382, 407, 413, 419, 439, 1109], "xrefstr": [375, 382, 407, 413, 419, 439, 477], "valtyp": [375, 382, 407, 413, 419, 439], "lang": [375, 382, 407, 413, 419, 439, 1169], "synonympropertyvalu": [375, 382, 386, 396, 407, 414, 419, 439, 440, 442, 445, 452, 467, 469, 474, 475, 477, 1175], "synonymtypedefinit": [375, 382, 386, 390, 398, 407, 412, 413, 419, 438, 439, 443, 452], "websit": [375, 382, 396, 407, 413, 419, 420, 477, 1103], "weak": [375, 396, 407, 413, 419, 477, 1110], "seealso": [375, 396, 407, 413, 419, 477, 478, 482, 487, 490, 510, 511, 514, 523, 532, 537, 542, 543, 544, 547, 615, 1169], "agent": [382, 482, 486, 490, 508, 511, 512, 513, 514, 523, 528, 529, 532, 534, 535, 537, 542, 543, 544, 547, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 627, 637, 648, 649, 657, 660, 666, 667, 668, 670, 818, 830, 837, 841, 842, 844, 847, 883, 884, 887, 921, 1060, 1069, 1082], "link": [382, 1037, 1067, 1069, 1070, 1071, 1074, 1075, 1078, 1079, 1086, 1087, 1088, 1094, 1095, 1098, 1108, 1112, 1116, 1120, 1133, 1158], "plai": [382, 1131], "mutual": [383, 387, 424, 425, 439, 445, 447, 460, 472, 473, 1131], "classid": [383, 439, 473], "classexpress": [383, 388, 439, 473, 485, 490, 499, 532, 538, 539, 543, 547, 558, 563, 582, 587, 615, 617, 632, 645, 647, 663, 672], "existentialrestrictionexpress": [383, 395, 424, 435, 439, 457, 462, 473], "unionequivalentto": [383, 439], "disjointunion": [383, 439, 472, 1176], "unionequivalenttoexpress": [383, 388, 439], "ot": [383, 439, 473], "predicateid": [384, 405, 439], "domainclassid": [384, 439], "rangeclassid": [384, 439], "allvaluesfromedg": [384, 386, 390, 439], "subpropertyof": [386, 390, 433, 439], "equivalentto": [386, 439], "obj": [386, 439], "head": [386, 464], "tail": [386, 449, 1142], "cliqu": [387, 390, 434, 439, 445, 447, 460, 1175], "equivalentclass": [387, 395, 490, 491, 539, 615, 630, 632, 1115, 1116, 1131, 1170, 1176], "representativenodeid": [387, 439], "cliq": [387, 439], "nodeid": [387, 439], "fstring": [388, 395], "objectsomevaluesfrom": [388, 1169, 1178], "oboidentifierstr": [390, 398, 412, 414, 438, 439], "lbl": [390, 398, 412, 414, 439], "subsetdefinit": [390, 398, 414, 438, 439, 443], "ter": [390, 439], "owlcollab": [390, 398, 402, 412, 414, 415, 420, 438, 1108], "oboformat": [390, 398, 402, 412, 414, 415, 420, 438, 1108], "legaci": [390, 398, 412, 414, 420, 443], "0008150": [390, 391, 455, 1169], "go_0008150": [390, 391, 455], "objectpropertyassert": [390, 433, 1176], "frequent": [391, 1108, 1110], "differenti": [395, 439, 462, 1115, 1171], "objectintersectionof": 395, "89": [395, 436, 462], "somevaluesfrom": [395, 462, 539, 615, 630, 1104, 1110, 1169], "affect": [396, 439], "belong": [396, 439, 466, 478, 482, 490, 504, 511, 514, 523, 532, 537, 542, 543, 547, 614, 615, 1121, 1169], "definitionpropertyvalu": [396, 407, 428, 439, 442, 445, 452, 474, 475, 477], "xrefpropertyvalu": [396, 407, 439, 442, 445, 452, 474, 475, 477], "basicpropertyvalu": [396, 407, 439, 442, 445, 452, 474, 475, 477], "predef": [396, 439], "insubset": [396, 466, 478, 482, 490, 504, 511, 514, 523, 532, 537, 542, 543, 547, 614], "versioninfo": [396, 476, 535, 615, 676, 837, 920], "histor": [396, 426, 1109, 1110, 1111, 1116], "carri": [396, 426], "awar": [396, 426], "0000115": [396, 428, 478, 482, 490, 507, 511, 514, 523, 532, 537, 542, 543, 547, 577, 1117], "predefin": [396, 422], "propertytyp": [398, 406, 439], "propertytypeenum": [398, 439, 458], "namedindividu": [399, 478, 482, 486, 490, 508, 511, 512, 513, 514, 528, 529, 532, 534, 535, 537, 542, 543, 544, 547, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 627, 637, 648, 649, 657, 660, 665, 666, 667, 668, 670, 826, 829, 840, 844, 894, 1169], "prefixedid": 402, "unprefixedid": 402, "info": [403, 409, 826, 829, 837, 840, 884, 920, 990, 1003, 1037, 1042, 1049, 1053, 1060, 1062, 1069, 1082, 1102, 1109, 1112, 1126, 1131, 1137, 1139, 1162], "hasexactsynonym": [403, 408, 478, 482, 487, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 602, 1106, 1109, 1117], "hasnarrowsynonym": [403, 408, 478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 603, 1109], "hasbroadsynonym": [403, 408, 478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 600, 1109], "hasrelatedsynonym": [403, 408, 478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 608, 1106, 1109], "go_": [404, 439, 1169], "strongli": [404, 454], "r1": [405, 439], "rn": [405, 439], "chainpredicateid": [405, 439], "claus": [405, 423, 439], "prope": [405, 439], "broader": [408, 1108, 1131], "bu": 408, "subsetproperti": [412, 1169], "synonymtyp": [413, 414, 439, 440, 1109], "synonymtypeidentifierstr": [413, 439, 467], "isexact": [413, 439], "scopeenum": [413, 439], "commonli": [415, 1108, 1195], "plain": [415, 700, 1109], "pmid": [419, 1110, 1131], "12345": 419, "registri": [420, 1185], "bioregistri": 420, "usag": [421, 431, 439, 445, 453, 459, 1108, 1109, 1111, 1120, 1130, 1131, 1167, 1171, 1177], "propert": [421, 431, 445, 453, 459], "principl": [439, 450, 1037, 1062, 1095, 1119], "attach": [439, 450, 696, 1169, 1177], "metedata": [439, 450], "Not": [439, 450, 1119, 1142, 1159], "obographs_datamodel": 439, "expr": 439, "nodetypeenum": 439, "objec": [442, 445, 452, 474, 475, 477], "benchmark": 451, "scopesenum": 463, "namedobject": [478, 482, 487, 490, 511, 514, 523, 532, 535, 537, 542, 543, 544, 547, 554, 610, 615, 670], "hassynonym": [478, 482, 483, 487, 490, 511, 512, 513, 514, 523, 524, 529, 532, 537, 542, 543, 547, 552, 586, 600, 602, 603, 608, 615, 664], "haslifecycl": [478, 482, 483, 486, 490, 511, 514, 523, 524, 528, 532, 534, 537, 542, 543, 544, 547, 565, 580, 593, 594, 595, 598, 605, 615, 660, 667], "hasproven": [478, 482, 483, 487, 490, 511, 514, 523, 524, 532, 535, 537, 542, 543, 547, 566, 568, 569, 570, 571, 574, 578, 585, 612, 615, 619, 648, 666, 668], "hasmap": [478, 482, 483, 487, 490, 511, 514, 523, 524, 532, 537, 542, 543, 544, 547, 557, 561, 573, 590, 615, 637], "hascategori": [478, 482, 483, 490, 511, 514, 523, 524, 532, 537, 542, 543, 544, 547, 559, 564, 604, 614, 615], "hasuserinform": [478, 482, 483, 487, 490, 511, 514, 523, 524, 532, 535, 537, 542, 543, 544, 547, 562, 572, 579, 591, 601, 611, 615, 649, 657], "hasminimalmetadata": [478, 482, 483, 487, 490, 511, 514, 523, 524, 532, 537, 542, 543, 547, 577, 615, 627], "has_exact_synonym": [478, 482, 487, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 615, 664], "labeltyp": [478, 482, 487, 490, 507, 509, 511, 514, 523, 532, 537, 542, 543, 547, 600, 602, 603, 608, 615, 627, 664], "has_narrow_synonym": [478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 615, 664], "has_broad_synonym": [478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 615, 664], "has_related_synonym": [478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 615], "alternative_term": [478, 479, 482, 490, 509, 511, 512, 513, 514, 523, 529, 532, 537, 542, 543, 547, 586, 600, 602, 603, 615, 664], "isa_alternative_term": [478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 552, 615], "iedb_alternative_term": [478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 552, 615], "editor_preferred_term": [478, 482, 490, 509, 511, 514, 523, 530, 532, 537, 542, 543, 547, 552, 615], "obo_foundry_unique_label": [478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 552, 615], "has_obsolescence_reason": [478, 482, 490, 505, 511, 514, 523, 532, 534, 537, 542, 543, 547, 615, 643], "term_replaced_bi": [478, 479, 482, 486, 490, 501, 505, 511, 514, 523, 530, 532, 534, 537, 542, 543, 547, 615, 643], "has_alternative_id": [478, 482, 490, 501, 505, 511, 514, 523, 528, 532, 537, 542, 543, 547, 615, 643], "excluded_from_qc_check": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 544, 547, 592, 615], "excluded_subclassof": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 592, 615], "excluded_synonym": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 592, 615], "should_conform_to": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 544, 547, 592, 615], "created_bi": [478, 482, 487, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 615, 652], "creator": [478, 482, 487, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 569, 615, 652, 1177], "came": [478, 482, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 568, 615], "editor_not": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 615, 652], "narrativetext": [478, 482, 490, 507, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 577, 585, 615, 669], "term_editor": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 615, 652], "definition_sourc": [478, 482, 490, 508, 511, 514, 520, 523, 530, 532, 537, 542, 543, 547, 615, 652], "ontology_term_request": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 615, 652], "imported_from": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 615, 652], "term_tracker_item": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 615, 652], "broadmatch": [478, 482, 490, 506, 511, 514, 523, 532, 537, 542, 543, 544, 547, 615, 631], "closematch": [478, 482, 490, 506, 511, 514, 523, 532, 537, 542, 543, 544, 547, 615, 631, 696, 1131], "narrowmatch": [478, 482, 490, 506, 511, 514, 523, 532, 537, 542, 543, 544, 547, 615, 631], "database_cross_refer": [478, 482, 487, 490, 506, 511, 514, 523, 532, 537, 542, 543, 547, 615, 631], "curieliter": [478, 482, 487, 490, 506, 511, 514, 523, 532, 537, 542, 543, 547, 573, 615], "has_obo_namespac": [478, 482, 490, 504, 511, 514, 523, 532, 537, 542, 543, 547, 615], "in_subset": [478, 482, 487, 490, 504, 505, 507, 508, 509, 510, 511, 514, 523, 532, 537, 542, 543, 547, 552, 560, 565, 577, 578, 580, 586, 591, 598, 615, 627, 667], "conformsto": [478, 482, 490, 504, 511, 514, 523, 532, 537, 542, 543, 544, 547, 615, 616], "example_of_usag": [478, 479, 482, 490, 510, 511, 514, 523, 532, 537, 542, 543, 547, 615, 616], "curator_not": [478, 482, 490, 510, 511, 514, 523, 532, 537, 542, 543, 547, 615, 652], "has_curation_statu": [478, 482, 490, 510, 511, 514, 523, 532, 537, 542, 543, 547, 615, 616], "depicted_bi": [478, 482, 490, 510, 511, 514, 523, 532, 537, 542, 543, 547, 615, 616], "page": [478, 482, 490, 510, 511, 514, 523, 532, 537, 542, 543, 547, 615, 616, 1108, 1111], "transitiveproperti": [478, 486, 490, 512, 513, 514, 523, 528, 529, 532, 534, 535, 537, 542, 544, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 582, 584, 585, 586, 588, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 618, 619, 622, 623, 625, 626, 627, 637, 648, 649, 651, 654, 657, 659, 660, 665, 666, 667, 668, 670, 1169], "homosapien": [478, 486, 490, 512, 513, 514, 523, 528, 529, 534, 535, 542, 544, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 627, 637, 648, 649, 657, 660, 666, 667, 668, 670], "orcid": [478, 511, 1109], "omoschema": [478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 497, 499, 504, 505, 506, 507, 508, 509, 510, 511, 514, 523, 524, 528, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 556, 567, 581, 592, 593, 594, 595, 607, 610, 616, 630, 631, 632, 640, 643, 650, 652, 655, 658, 660, 676], "id_prefix": [478, 511, 938, 942, 1169], "disjoint_with": [478, 482, 487, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 602], "allotrop": [478, 479, 480, 482, 487, 490, 505, 507, 509, 510, 511, 514, 523, 532, 537, 542, 543, 547, 552, 560, 577, 580, 591, 627, 667], "permit": [478, 482, 487, 490, 505, 508, 509, 510, 511, 514, 523, 532, 537, 542, 543, 547, 552, 560, 565, 578, 580, 586, 591, 598, 667], "0001847": [478, 482, 490, 509, 511, 513, 514, 523, 532, 537, 542, 543, 547], "9991118": [478, 482, 490, 509, 511, 512, 514, 523, 532, 537, 542, 543, 547], "0000111": [478, 482, 490, 509, 511, 514, 523, 532, 537, 542, 543, 547, 586], "uniquekei": [478, 482, 490, 509, 511, 514, 523, 529, 532, 537, 542, 543, 547], "0000589": [478, 482, 490, 509, 511, 514, 523, 529, 532, 537, 542, 543, 547], "obsoletion_related_properti": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 565, 580, 598, 605, 615, 667], "obsoleteaspect": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 565, 580, 605, 615, 667], "0000231": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 605, 1117], "isreplacedbi": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 667], "0100001": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 667, 1117, 1169], "owlc": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598], "owlapi": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 1176], "317": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598], "notobsoleteaspect": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 615], "hasalternativeid": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 598, 1117], "excluded_axiom": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 593, 594, 595, 615, 660], "hiddensynonym": [478, 482, 490, 505, 511, 514, 523, 532, 537, 542, 543, 547, 595], "2022": [478, 482, 487, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 569, 570, 1153], "04": [478, 482, 487, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 569, 570], "12": [478, 482, 487, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 569, 570], "deprecated_element_has_exact_replac": [478, 482, 487, 490, 508, 511, 514, 520, 521, 522, 523, 532, 537, 542, 543, 547, 569, 570, 626, 642], "provenance_properti": [478, 482, 487, 490, 508, 510, 511, 514, 523, 532, 535, 537, 542, 543, 547, 566, 568, 569, 570, 571, 572, 574, 575, 578, 585, 599, 612, 615, 648, 662, 666, 668], "wasattributedto": [478, 482, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 566, 571], "structured_pattern": [478, 482, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 566, 571], "orcid_regex": [478, 482, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 566, 571], "interpol": [478, 482, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 566, 571], "partial_match": [478, 482, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 566, 571], "pav": [478, 482, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 568, 574, 619, 675], "createdon": [478, 482, 490, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 568], "authoredon": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 574], "importedfrom": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 619], "0000116": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 585], "narr": [478, 482, 490, 507, 508, 511, 514, 523, 532, 535, 537, 542, 543, 547, 577, 585, 669], "0000117": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 666], "0000119": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 578], "0000234": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 648], "0000412": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 612], "0000233": [478, 482, 490, 508, 511, 514, 523, 532, 537, 542, 543, 547, 668], "informative_properti": [478, 482, 487, 490, 504, 510, 511, 514, 523, 532, 535, 537, 542, 543, 547, 559, 560, 562, 564, 576, 579, 591, 601, 606, 611, 615, 628, 629, 649], "sdo": [478, 482, 490, 510, 511, 514, 523, 532, 537, 542, 543, 547, 611], "0000112": [478, 482, 490, 510, 511, 514, 523, 532, 537, 542, 543, 547, 591], "0000232": [478, 482, 490, 510, 511, 514, 523, 532, 537, 542, 543, 547, 572], "0000114": [478, 482, 490, 510, 511, 514, 523, 532, 537, 542, 543, 547, 601], "foaf": [478, 482, 490, 510, 511, 514, 523, 532, 537, 542, 543, 547, 579, 649, 1118, 1195], "guidelin": [478, 487, 507, 511, 514, 523, 543, 627, 1102, 1129, 1143], "core_properti": [478, 482, 487, 490, 507, 511, 514, 523, 524, 532, 535, 537, 542, 543, 547, 577, 610, 615, 627], "aristotelian": [478, 507, 511, 514, 523, 543, 577, 1115], "logical_pred": [478, 482, 490, 491, 511, 514, 523, 524, 532, 535, 537, 538, 539, 542, 543, 544, 547, 551, 558, 563, 582, 583, 584, 587, 588, 597, 615, 617, 618, 633, 634, 635, 636, 645, 646, 647, 651, 653, 654, 656, 661, 663, 670, 672], "designates_typ": [478, 482, 490, 511, 514, 523, 524, 532, 535, 537, 542, 543, 544, 547, 670], "gitlab": [479, 480], "devop": [479, 480], "allotrope_framework_term_curation_style_guid": [479, 480], "pdf": [479, 480, 497], "changenot": [479, 615, 616], "reifi": [481, 615, 640, 650], "relational_rol": [481, 487, 553, 554, 555, 640, 650], "represents_relationship": [481, 487], "is_class_level": [482, 532, 537, 542, 547, 615], "is_metadata_tag": [482, 532, 537, 542, 547, 615], "annotatedproperti": [482, 487, 615, 655], "has_synonym_typ": [482, 487, 615], "root": [484, 615, 1108, 1131, 1169, 1173, 1175, 1182], "anonymousclassexpress": [484, 539, 615], "anonym": [485, 539, 615, 844, 850, 851, 884, 885, 1115, 1169], "annotatedtarget": [486, 487, 615, 655], "annotatedsourc": [487, 524, 615, 655], "is_inf": [487, 615], "has_axiom_label": [487, 544, 615, 652], "is_a_defining_property_chain_axiom": [487, 615], "is_a_defining_property_chain_axiom_where_second_argument_is_reflex": [487, 615], "date_retriev": [487, 615, 652], "external_ontologi": [487, 615], "reification_pred": [487, 553, 554, 555, 615], "dc": [487, 535, 662], "0010000": [487, 599], "0002581": [487, 620], "0002582": [487, 621], "hassynonymtyp": [487, 609], "never_in_taxon": [490, 615], "disconnected_from": [490, 615, 658], "has_rank": [490, 544, 615], "disjointwith": [490, 491, 532, 538, 539, 547, 615, 630], "intersectionof": [490, 491, 539, 615, 630], "complementof": [490, 491, 539, 615, 630], "oneof": [490, 491, 539, 615, 630], "unionof": [490, 491, 539, 615, 630], "has_ontology_root_term": [490, 535, 615, 616], "0002161": [490, 638, 941, 957], "shortcut_annotation_properti": [490, 581, 615], "taxslim": [490, 607], "propertyexpress": [490, 491, 499, 532, 537, 539, 547, 582, 615, 646], "match_aspect": [490, 491, 532, 539, 547, 557, 561, 573, 587, 588, 590, 615, 630, 631, 637, 656], "definitionconstraint": 497, "dcc": 497, "problem": [497, 1042, 1069, 1184, 1195], "definitionpres": 497, "s0": 497, "s1": 497, "harmon": 497, "genusdifferentiaform": 497, "s3": [497, 1126, 1137, 1185], "singlegenu": 497, "circular": [497, 1115], "s7": 497, "matchtextandlog": 497, "s11": 497, "305": 497, "philpap": 497, "archiv": 497, "sepgfw": 497, "annotationpropertymixin": [504, 505, 506, 507, 508, 509, 510, 615], "namedth": [504, 505, 506, 507, 508, 509, 510, 512, 513, 529, 543, 552, 557, 559, 561, 562, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 577, 578, 579, 580, 585, 586, 590, 591, 593, 594, 595, 598, 600, 601, 602, 603, 604, 605, 608, 610, 611, 612, 614, 615, 619, 627, 637, 648, 649, 657, 660, 666, 667, 668, 670], "slot_condit": [505, 528, 534], "any_of": [505, 679, 719], "none_of": [505, 528, 679, 719], "absolut": [507, 577, 615, 627], "whose": [509, 512, 513, 529, 552, 586, 600, 602, 603, 608, 615, 844, 884, 918, 1108, 1109, 1119, 1139], "four": 509, "subproperti": 509, "0000101": 514, "tidi": 519, "ncit": [520, 521, 522, 1109, 1169], "p378": 520, "p384": 521, "p383": 522, "temporal_interpret": [523, 532, 547, 615], "auto": [528, 534, 615, 1169, 1171, 1172, 1174, 1178, 1179, 1181, 1184], "classifi": [528, 534, 615, 1119], "classification_rul": [528, 534], "jsonobj": [528, 1179, 1183, 1196], "is_cycl": [532, 547, 615], "is_transit": [532, 547, 615, 1119], "equivalentproperti": [532, 537, 547, 615, 630, 632], "inverseof": [532, 537, 547, 615, 630], "0001900": [532, 547, 665], "licens": [535, 544, 615, 616], "versioniri": [535, 615, 676, 837, 919], "0000700": [535, 606], "version_properti": [535, 615, 674, 675], "onproperti": [538, 539, 615, 630], "allvaluesfrom": [539, 615, 630], "proteg": 576, "defaultlanguag": [615, 616], "distinctmemb": [615, 630], "hasvalu": [615, 630], "maxqualifiedcardin": [615, 630], "mincardin": [615, 630], "minqualifiedcardin": [615, 630], "ncit_definition_sourc": 615, "ncit_term_sourc": 615, "ncit_term_typ": 615, "oboinowl_id": 615, "oboinowl_ontologi": 615, "lifecycl": [615, 643, 1117], "onclass": [615, 630], "qualifiedcardin": [615, 630], "samea": [615, 630, 632, 1116], "definitionconstraintcompon": 615, "irityp": 615, "tidystr": 615, "urlliter": 615, "allotropepermittedprofil": 615, "allotroperequiredprofil": 615, "gopermittedprofil": 615, "gorecommendedprofil": 615, "gorequiredprofil": 615, "obipermittedprofil": 615, "obirequiredprofil": 615, "dce": 628, "OR": [678, 1104, 1174, 1185, 1196], "xor": 678, "ontosearch": [679, 694, 695, 697, 698, 706, 707, 708, 709, 710, 711, 712, 713, 718, 720, 721, 722, 724, 725, 726, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742], "all_of": [679, 719], "path_to": [679, 719], "searchbaseconfigur": [679, 694, 698, 708, 709, 710, 711, 712, 718, 719, 720, 721, 722, 724, 733, 738, 739, 741], "descendant_of": 687, "ancestor_of": 687, "proper_descendant_of": 687, "proper_ancestor_of": 687, "parent_of": 687, "child_of": 687, "queri": [694, 695, 713, 719, 738, 739, 742, 1105, 1106, 1108, 1110, 1113, 1116, 1117, 1118, 1119, 1125, 1126, 1130, 1132, 1133, 1135, 1137, 1139, 1142, 1150, 1165, 1166, 1168, 1169, 1173, 1175, 1179, 1184, 1185, 1195], "graphfunct": [694, 719, 742], "graph_pred": [694, 719], "search_term": [694, 695, 719, 1179], "searchterm": [695, 719, 739], "searchtermsyntax": [695, 719, 741, 1150, 1179, 1196], "searchproperti": [695, 719, 733, 1179], "batch": [695, 719, 724, 1143, 1166], "cursor": [695, 698, 719], "exce": [695, 719], "iterat": [695, 719], "is_parti": [695, 719, 720, 1179], "is_complet": [695, 719], "include_obsoletes_in_result": [695, 719], "is_fuzzi": [695, 719], "force_case_insensit": [695, 719], "insensit": [695, 712, 719], "complexqueri": [695, 706, 707, 708, 719, 726, 732], "pathexpress": [695, 713, 719, 738, 742], "searchresultset": [695, 697, 710, 711, 719, 735, 736], "searchconfigur": [695, 1150, 1173, 1179, 1196], "replacement_identifi": 696, "mapped_identifi": [696, 1179], "informative_text": 696, "low": [697, 719, 734, 1143], "object_sourc": [697, 719, 767, 782, 844, 884, 889, 891, 990, 1003, 1116, 1131, 1174], "object_source_vers": [697, 719], "object_match_field": [697, 719], "matches_full_search_term": [697, 719], "snippet": [697, 719], "searchresult": [698, 719, 725, 727, 728, 729, 730, 731, 734, 736, 740], "result_count": [698, 719], "plaintext": [700, 1196], "regular_express": [700, 1150, 1179, 1196], "regular": [700, 1063, 1131, 1179], "ecmascript": 700, "percent": 700, "lucen": 700, "solr": [700, 1139], "starts_with": 700, "searc": 700, "operat": [709, 711, 712, 718, 720, 721, 722, 724, 733, 739, 741], "search_datamodel": [714, 715, 716, 717, 723], "layer": [719, 737, 1111, 1137, 1165], "servic": [719, 737, 1104, 1108, 1153, 1154, 1160, 1167, 1170, 1185], "cover": [719, 737], "googl": [719, 737, 1125], "although": [719, 737, 1108, 1109, 1111, 1112, 1117, 1120, 1160], "could": [719, 737, 844, 884, 918, 1101, 1108, 1111, 1125, 1143], "booleanoper": 719, "orm": [744, 1130, 1154], "sim": [745, 763, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 787, 788, 789, 790, 791, 792, 793, 794, 796, 799, 800, 801, 802, 803, 804, 806, 809, 810, 811, 813, 1168], "match_sourc": [745, 782], "match_source_label": [745, 782], "match_target": [745, 782], "match_target_label": [745, 782], "match_subsum": [745, 782], "match_subsumer_label": [745, 782], "termpairwisesimilar": [745, 763, 773, 774, 775, 776, 779, 780, 782, 785, 795, 796, 797, 798, 801, 803, 805, 806, 807, 808, 1180], "termsetpairwisesimilar": [745, 763, 766, 777, 778, 782, 793, 794, 799, 804, 809, 1120, 1168], "subject_best_match": [745, 768, 782], "object_best_match": [745, 768, 782], "subject_termset": [766, 768, 782], "object_termset": [766, 768, 782], "pairwisesimilar": [767, 768, 782], "subject_id": [767, 782, 1042, 1069, 1101, 1116, 1131, 1174], "subject_sourc": [767, 782, 980, 990, 1003, 1116, 1131], "ancestor_id": [767, 782], "ancestor_label": [767, 782], "ancestor_sourc": [767, 782], "object_information_cont": [767, 782, 783], "negativelogvalu": [767, 774, 782, 783, 796, 806], "subject_information_cont": [767, 782, 783], "ancestor_information_cont": [767, 782, 783], "jaccard_similar": [767, 782, 801, 802], "zerotoon": [767, 780, 782, 785, 800, 810, 811], "intersect": [767, 782, 785], "cosine_similar": [767, 782, 802], "dot": [767, 779, 782], "embed": [767, 779, 782, 1120], "dice_similar": [767, 782, 802], "nonnegativefloat": [767, 782, 801], "geometr": [767, 782, 801], "content": [767, 782, 801, 1108, 1133, 1166, 1169, 1172, 1180], "bestmatch": [767, 768, 782, 787, 788, 789, 790, 791, 792, 794, 802, 803, 804], "decid": [767, 773, 1119, 1168, 1184], "ancesto": [767, 773], "information_cont": [767, 774, 782, 796, 801, 802, 806], "sqrt": [767, 801], "terminfo": [768, 781, 782, 786, 799, 809], "average_scor": [768, 782], "best_scor": [768, 782], "intersection_count": [782, 802], "overlap_coeffici": [782, 802], "subsumed_by_scor": [782, 802], "subsumes_scor": [782, 802], "union_count": [782, 802], "itemcount": [782, 784, 813], "summarystatisticsreport": [815, 818, 830, 837, 841, 844, 848, 865, 883, 884, 899, 922], "groupedstatist": [815, 837, 841, 842, 844, 848, 865, 883, 884, 899, 903, 922, 1182], "ungroupedstatist": [815, 817, 819, 827, 830, 837, 841, 842, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 865, 868, 870, 871, 872, 874, 875, 876, 878, 879, 883, 884, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 899, 900, 901, 903, 905, 907, 910, 911, 913, 914, 917, 918, 922, 1182], "summarystatisticscalculationact": [815, 830, 842, 844, 847, 877, 884, 909, 921, 922], "was_associated_with": [815, 841, 884], "acted_on_behalf_of": [815, 841, 884], "summary_statist": [815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 917, 918, 919, 920, 921, 922], "contributorrol": [815, 830, 837, 842, 844, 883, 884], "filtered_count": [817, 827, 884], "change_summari": [817, 844, 884], "facetedcount": [817, 819, 844, 858, 859, 876, 878, 881, 882, 884, 889, 890, 891, 908, 914], "contributor_id": [819, 884], "contributor_nam": [819, 884], "normalization_com": [819, 884], "role_count": [819, 827, 884], "contributor_summari": [819, 844, 884], "summarystatisticcollect": [826, 829], "class_count": [826, 829, 840, 844, 869, 884], "anonymous_class_expression_count": [826, 829, 840, 844, 869, 884], "unsatisfiable_class_count": [826, 829, 840, 844, 869, 884], "class_count_excluding_deprec": [826, 829, 840], "class_count_with_definit": [826, 829, 840], "property_count": [826, 829, 840, 844, 869, 884], "object_property_count": [826, 829, 840, 844, 869, 884], "datatype_property_count": [826, 829, 840, 844, 869, 884], "annotation_property_count": [826, 829, 840, 844, 869, 884], "individual_count": [826, 829, 840, 844, 851, 869, 884], "named_individual_count": [826, 829, 840, 844, 851, 869, 884], "anonymous_individual_count": [826, 829, 840, 844, 869, 884], "untyped_entity_count": [826, 829, 840, 844, 869, 884], "description_logic_profil": [826, 829, 840, 844, 884], "owl_axiom_count": [826, 829, 840, 844, 869, 884], "rdf_triple_count": [826, 829, 840, 844, 869, 884], "subclass_of_axiom_count": [826, 829, 840, 844, 869, 884], "equivalentclasses_axiom_count": [826, 829, 840], "distinct_synonym_count": [826, 829, 840, 844, 869, 884], "synonym_statement_count": [826, 829, 840, 844, 869, 884], "mapping_count": [826, 829, 840, 844, 869, 884], "ontology_count": [826, 829, 840, 844, 869, 884], "globalstatist": [826, 840], "by_categori": [826, 829], "by_taxon": [826, 829], "by_ontologi": [826, 829], "by_subset": [826, 829], "count_statist": [826, 829, 840, 844, 849, 850, 851, 857, 860, 861, 862, 863, 870, 871, 872, 875, 879, 880, 884, 885, 888, 892, 894, 895, 896, 898, 900, 901, 905, 907, 910, 911, 913, 917, 918], "class_statistic_group": [826, 829, 840, 844, 850, 857, 862, 863, 871, 884, 892, 895, 917], "property_statistic_group": [826, 829, 840, 844, 849, 870, 872, 884, 896, 898, 905], "individual_statistic_group": [826, 829, 840, 844, 851, 884, 885, 894], "count_of": [826, 829, 840, 864, 906], "owl_statistic_group": [826, 829, 840, 844, 874, 879, 884, 901, 907, 910], "metadata_statistic_group": [826, 829, 840, 844, 858, 859, 875, 876, 878, 884, 888, 889, 890, 891, 913, 914], "edge_count_by_pred": [827, 844, 884], "entailed_edge_count_by_pred": [827, 844, 884], "synonym_statement_count_by_pred": [827, 844, 884], "class_count_by_subset": [827, 844, 884], "class_count_by_categori": [827, 844, 884], "mapping_statement_count_by_pred": [827, 844, 884], "mapping_statement_count_by_object_sourc": [827, 844, 884, 891], "mapping_statement_count_subject_by_object_sourc": [827, 844, 884], "contributorstatist": [827, 844, 866, 867, 868, 884, 897, 908], "changetypestatist": [827, 844, 856, 881, 882, 884], "facetstatist": [829, 840, 852, 853, 854, 855], "mf": [829, 830, 903], "bp": [829, 830, 903], "cc": [829, 830, 903], "sens": [829, 1108, 1111, 1115, 1142], "metagenomics_slim": 829, "compared_with": [830, 837, 842, 844, 884], "was_generated_bi": [830, 841, 842, 844, 884], "version_info": [837, 884], "started_at_tim": [841, 884], "ended_at_tim": [841, 884], "behalf": [841, 847, 884], "startedattim": [841, 909], "endedattim": [841, 877], "wasassociatedwith": [841, 921], "actedonbehalfof": [841, 847], "unsatisfi": [844, 884, 917, 941, 955, 1128, 1184], "deprecated_class_count": [844, 869, 884], "non_deprecated_class_count": [844, 869, 884], "merged_class_count": [844, 869, 884], "class_count_with_text_definit": [844, 869, 884], "class_count_without_text_definit": [844, 869, 884], "deprecated_object_property_count": [844, 869, 884], "non_deprecated_object_property_count": [844, 869, 884], "subset_count": [844, 869, 884], "slim": [844, 859, 884, 911, 1169], "equivalent_classes_axiom_count": [844, 869, 884], "exter": [844, 884], "notdeprec": [844, 895, 896], "hastextdefinit": [844, 862], "nothastextdefinit": [844, 863], "anonymousindividu": [844, 851], "el": [844, 874], "dl": [844, 874], "entailededg": [844, 878, 1154, 1165], "objectsourc": [844, 889, 891], "reportby_categori": 852, "reportby_ontologi": 853, "reportby_subset": 854, "reportby_taxon": 855, "reportclass_count_excluding_deprec": 860, "reportclass_count_with_definit": 861, "reportequivalentclasses_axiom_count": 880, "taxon_constraint": [923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971], "excluderedund": 924, "includeredund": 924, "includeneverinifredundantwithonlyin": 924, "excludeneverinifredundantwithonlyin": 924, "tc": [938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 960, 962, 963, 964, 965, 966, 970, 971], "come": [941, 955, 1102, 1107, 1108, 1119, 1134, 1136, 1142], "lead": [941, 955, 970, 1119], "cont": [941, 955], "only_in": [941, 943, 955], "state": [941, 955, 957, 958, 1119, 1169, 1184], "never_in": [941, 943, 955, 959], "present_in": [941, 943, 955], "present_in_ancestor_of": [941, 943, 955], "via_term": [941, 943, 955, 960], "contradict": [941, 970], "conflat": [941, 958], "0002160": [941, 958, 1133, 1169], "0002175": [941, 961], "taxonom": [942, 954, 955, 956], "higher": [942, 954, 955, 956, 1131, 1165, 1195], "ncbitaxon_union": 942, "subjectterm": [943, 944, 952, 954, 955, 956, 957, 958, 961, 962, 967, 970, 971], "predicateterm": [943, 944, 954, 955, 956, 959, 960], "evolutionari": [943, 955], "nev": [943, 955], "redundant_with_only_in": [943, 955], "redundant_with": [943, 955], "contradicted_bi": [943, 955], "conflict": [943, 951, 955], "taxo": [943, 955], "in_taxon": [943, 959], "configurationopt": 955, "ann": [980, 990, 991, 992, 993, 998, 999, 1001, 1002, 1004, 1005, 1006, 1008, 1009, 1010, 1011, 1012, 1016, 1018, 1019, 1020, 1021, 1023, 1024, 1025, 1027], "subject_text_id": [980, 990, 993, 1003], "textualel": [980, 990, 1001, 1003, 1016, 1018, 1024, 1025], "textannot": [980, 991, 992, 993, 998, 1000, 1003, 1004, 1005, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1017, 1020, 1021, 1022, 1023, 1024, 1173, 1183], "bpa": [980, 990, 1013, 1014, 1020, 1021, 1023], "hasspan": [990, 993, 1003, 1020, 1021, 1022, 1023, 1024], "object_categori": [990, 1003], "match_str": [990, 1003, 1131], "is_longest_match": [990, 1003, 1131], "matches_whole_text": [990, 991, 1003, 1131], "match_typ": [990, 1003, 1131], "textannotationresultset": [990, 998, 1003], "annotatedclass": [990, 1013, 1014], "textannotationconfigur": [990, 999, 1002, 1003, 1006, 1009, 1010, 1019, 1027, 1183], "token_exclusion_list": [991, 1003], "include_alias": [991, 1003], "grounding_mod": 991, "source_text": [993, 1003], "parent_docu": [993, 1003], "upon": [1003, 1026, 1121, 1131, 1168], "tr": [1003, 1026, 1169], "validation_result": [1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1100], "vm": [1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1057, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1071, 1072, 1073, 1074, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1085, 1087, 1089, 1090, 1091, 1092, 1093, 1094, 1096, 1098, 1099], "namedresourc": [1030, 1045, 1068, 1069], "validationresult": [1030, 1037, 1042, 1045, 1049, 1052, 1057, 1061, 1069, 1070, 1071, 1075, 1078, 1079, 1083, 1086, 1087, 1088, 1095, 1184], "externalreferencevalidationresult": [1030, 1045, 1062, 1067, 1069, 1070, 1071, 1074, 1075, 1078, 1079, 1086, 1087, 1088, 1094, 1095, 1098], "time_check": [1037, 1069], "number_of_attempt": [1037, 1069], "http_response_cod": [1037, 1069], "constraintcompon": [1037, 1043, 1062, 1068, 1069, 1095], "sever": [1037, 1053, 1057, 1060, 1062, 1069, 1095, 1096, 1110, 1126], "severityopt": [1037, 1057, 1062, 1069, 1086], "object_str": [1037, 1062, 1069], "sourceconstraintcompon": [1037, 1062, 1095], "typeseveritykeyvalu": [1037, 1060, 1062, 1069, 1086, 1095, 1096], "resultsever": [1037, 1062, 1086], "severity_opt": [1037, 1053, 1057, 1062, 1086], "focusnod": [1037, 1062, 1088], "sourceshap": [1037, 1062, 1071], "related_map": [1037, 1062, 1079], "resultpath": [1037, 1062, 1079], "resultmessag": [1037, 1062, 1070], "mappingvalidationresult": [1037, 1049, 1052, 1062, 1064, 1065, 1069, 1070, 1076, 1077, 1080, 1081, 1089, 1090, 1092, 1093, 1184], "repairoper": [1037, 1042, 1050, 1052, 1062, 1069, 1070, 1073, 1083, 1091, 1184], "correct": [1042, 1064, 1065, 1069, 1070, 1076, 1077, 1080, 1081, 1089, 1090, 1092, 1093, 1102, 1117], "subject_info": [1042, 1069], "object_info": [1042, 1069], "suggested_pred": [1042, 1069], "suggested_modif": [1042, 1069], "repair": [1048, 1049, 1050, 1062, 1066, 1069, 1070, 1073, 1084, 1091, 1099, 1173, 1184], "validation_configur": [1048, 1060, 1069], "validationconfigur": [1048, 1057, 1069, 1072, 1082, 1085, 1096, 1099, 1184], "dry_run": [1048, 1069, 1184], "repairreport": [1049, 1051, 1069, 1084], "integr": [1049, 1108, 1131, 1150], "abl": [1049, 1109, 1111, 1120, 1179], "holder": [1051, 1069, 1084], "validationreport": [1051, 1062, 1069, 1084], "fatal": 1053, "violat": [1053, 1184], "warn": 1053, "type_severity_map": [1057, 1060, 1069], "conforms_to": 1057, "q4818718": 1057, "max_number_results_per_typ": [1060, 1069], "truncat": [1060, 1069, 1072, 1131], "schema_path": [1060, 1069], "prompt_info": [1060, 1069], "ai": [1060, 1069, 1082, 1108], "prompt": [1060, 1069, 1082], "repairconfigur": [1060, 1066, 1069, 1099, 1184], "aris": [1062, 1069, 1070, 1071, 1075, 1078, 1079, 1086, 1087, 1088, 1095], "datatypeconstraintcompon": [1063, 1126], "mincountconstraintcompon": [1063, 1126], "spe": 1063, "maxcountconstraintcompon": [1063, 1126], "deprecatedpropertycompon": [1063, 1126], "maxlengthconstraintcompon": 1063, "minlengthconstraintcompon": 1063, "patternconstraintcompon": 1063, "closedconstraintcompon": [1063, 1126], "ruleconstraintcompon": 1063, "validaton": 1069, "validationresulttyp": 1069, "parti": [1070, 1071, 1075, 1078, 1079, 1086, 1087, 1088, 1095], "focu": [1101, 1108, 1137, 1142], "code": [1101, 1103, 1104, 1108, 1118, 1121, 1125, 1128, 1130, 1133, 1135, 1139, 1142, 1143, 1145, 1147, 1154, 1162, 1169, 1173, 1185], "talk": [1101, 1104, 1132, 1175, 1183], "get_adapt": [1101, 1109, 1112, 1116, 1117, 1118, 1119, 1125, 1128, 1132, 1133, 1139, 1142, 1143, 1150, 1156, 1158, 1160, 1161, 1162, 1165, 1166, 1168, 1169, 1170, 1171, 1173, 1174, 1175, 1179, 1183, 1185], "0011103": 1101, "sympathet": 1101, "underli": [1101, 1117, 1119, 1137], "basic_ontology_imerfac": 1101, "doesn": [1101, 1111, 1112, 1115, 1119, 1120, 1131, 1160, 1195], "task": [1101, 1104, 1106, 1108, 1109, 1111, 1125], "often": [1101, 1104, 1108, 1109, 1111, 1115], "coupl": 1101, "notat": 1101, "sssom_map": [1101, 1116, 1173, 1174], "0005886": [1101, 1174], "cell_membran": [1101, 1174], "scalabl": 1101, "amen": 1101, "runoak": [1102, 1104, 1106, 1107, 1109, 1110, 1111, 1112, 1115, 1116, 1117, 1119, 1120, 1121, 1125, 1126, 1128, 1131, 1135, 1137, 1138, 1139, 1145, 1147, 1150, 1151, 1153, 1155, 1156, 1158, 1160, 1161, 1162, 1163, 1166, 1168, 1174, 1179, 1195], "global": 1102, "jupyt": [1102, 1104, 1129], "directori": [1102, 1131, 1141, 1161], "our": [1102, 1106, 1119, 1185], "eventu": 1102, "repositori": [1102, 1106, 1108, 1131, 1137, 1139, 1165, 1175], "easiest": [1102, 1126], "myontid": 1102, "chebi": [1102, 1117, 1131, 1133, 1142], "cystein": [1102, 1131], "almost": 1102, "disjunct": 1102, "handi": 1102, "memor": 1102, "devic": 1102, "l": [1102, 1131, 1162, 1179, 1196], "pameter": 1102, "bone": 1102, "forelimb": [1102, 1119], "pipe": 1102, "interneuron": [1102, 1131, 1132], "next": [1102, 1125, 1130, 1132], "0002405": 1102, "0002039": 1102, "0000893": 1102, "0001042": 1102, "0000935": 1102, "chainabl": 1102, "slack": [1102, 1103], "channel": [1102, 1103], "copi": [1102, 1107, 1117, 1125, 1162, 1177], "idea": [1103, 1125], "improv": [1103, 1107, 1131], "stylist": 1103, "suggest": [1103, 1122], "free": [1103, 1126, 1132], "repo": [1103, 1104, 1126, 1141], "workspac": 1103, "join": [1103, 1109], "technic": 1104, "site": [1104, 1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "academi": [1104, 1111, 1114], "command": [1104, 1106, 1108, 1109, 1110, 1111, 1112, 1113, 1115, 1116, 1117, 1119, 1120, 1121, 1125, 1129, 1130, 1137, 1147, 1154, 1156, 1161, 1163, 1167, 1177, 1185, 1195], "line": [1104, 1106, 1108, 1109, 1110, 1111, 1112, 1113, 1117, 1119, 1125, 1129, 1130, 1131, 1147, 1154, 1167, 1183, 1185, 1195], "5281": 1104, "zenodo": 1104, "7708963": 1104, "monarch": [1104, 1108], "video": 1104, "throughout": 1104, "chosen": 1104, "mirror": 1104, "companion": 1104, "odk": [1104, 1137], "homag": 1104, "oakland": 1104, "onc": [1104, 1137, 1195, 1196], "consult": [1104, 1128, 1137], "ontoport": [1104, 1108, 1130, 1151, 1183], "speak": 1104, "allianc": [1104, 1131], "expens": 1104, "excel": 1104, "bank": 1104, "brown": 1104, "fox": 1104, "synchron": 1104, "addition": [1104, 1118, 1119, 1133, 1185], "capabl": [1104, 1107, 1125, 1133, 1139, 1172], "particularli": [1104, 1119], "simpleobo_implement": 1104, "fast": [1104, 1107, 1121], "rigor": 1104, "major": 1104, "blocker": 1104, "maintain": 1104, "small": [1104, 1111, 1142, 1162], "consum": [1104, 1115], "compil": [1104, 1162], "sqlite3": [1104, 1107, 1130, 1185], "sparql_implement": [1104, 1164], "wider": [1104, 1131], "abil": [1104, 1106, 1125], "plan": [1104, 1142, 1165], "rust": [1104, 1120], "whelk": 1104, "viz": [1104, 1111, 1119, 1131, 1134, 1135], "variant": [1104, 1111], "runnabl": 1105, "am": 1105, "familiar": [1105, 1132], "me": [1105, 1125], "why": [1105, 1110, 1113, 1119, 1142], "bio": [1105, 1106, 1108, 1109, 1110, 1119], "portal": [1105, 1142], "matport": 1105, "triplestor": [1105, 1108, 1118, 1129, 1130, 1131, 1138], "chatgpt": [1105, 1125], "stai": 1105, "troubleshoot": [1105, 1129], "messag": 1105, "won": 1105, "long": [1105, 1120, 1142], "cach": [1105, 1131, 1137, 1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1169, 1175, 1176, 1183], "fine": [1106, 1118, 1142, 1143], "tune": [1106, 1166], "impress": 1106, "pure": [1106, 1117, 1120, 1173], "answer": [1106, 1110, 1125, 1142], "good": [1106, 1115, 1117, 1168, 1179], "interest": [1106, 1115, 1120, 1160], "fusion": 1106, "research": 1106, "ontogpt": [1106, 1108, 1122, 1183], "project": [1106, 1108, 1119, 1121, 1122, 1130, 1165, 1184], "theoret": [1106, 1134], "easili": 1106, "0000084": [1106, 1139], "lymphocyt": [1106, 1139], "immatur": 1106, "matur": 1106, "becaus": [1107, 1108, 1115, 1117, 1118, 1121, 1131, 1169, 1195], "ont": [1107, 1112, 1118, 1125, 1133, 1147, 1169, 1195], "lexmatch": [1107, 1116], "guidanc": 1107, "rdflib": [1107, 1136, 1158, 1159, 1164, 1166, 1185], "sparql_adapt": 1107, "known": [1107, 1108, 1111, 1112, 1115, 1119, 1120, 1154, 1168, 1169], "sql_adapt": 1107, "made": [1107, 1117, 1126, 1130, 1185, 1195], "manag": [1107, 1108, 1112, 1125, 1132, 1134, 1183, 1186], "purg": 1107, "stale": 1107, "rm": [1107, 1137], "necessari": [1107, 1111, 1117, 1119, 1131, 1143], "gz": [1107, 1137], "strive": 1107, "fill": 1107, "feedback": 1107, "deeper": 1108, "dive": 1108, "discret": 1108, "artefact": [1108, 1142], "0000948": [1108, 1112, 1118], "technologi": 1108, "uniform": [1108, 1110, 1133, 1195], "peopl": [1108, 1120, 1128, 1131, 1185], "usual": [1108, 1110], "literatur": 1108, "learn": [1108, 1113, 1128, 1129, 1131, 1132, 1153], "neo4j": 1108, "upper": [1108, 1119], "seen": [1108, 1115, 1119, 1131], "nuanc": 1108, "despit": 1108, "terminologi": [1108, 1109, 1111], "confusingli": 1108, "curat": [1108, 1111, 1113, 1129, 1131, 1168], "conceptu": 1108, "due": [1108, 1128, 1131], "emploi": 1108, "numer": [1108, 1112, 1139, 1160, 1165], "obscur": 1108, "finger": [1108, 1115, 1125, 1134, 1175], "vertex": 1108, "scoliosi": 1108, "vertebr": 1108, "overload": 1108, "programmat": [1108, 1125, 1128, 1130, 1131], "counterpart": [1108, 1115], "Of": 1108, "reachabl": 1108, "convers": [1108, 1122, 1129], "mucopolysaccharidosi": 1108, "lysosom": 1108, "storag": 1108, "singleton": [1108, 1169, 1173], "musculoskelet": 1108, "behind": [1108, 1133, 1142], "scene": [1108, 1133, 1142], "obook": [1108, 1111, 1114], "harold": 1108, "solbrig": 1108, "easi": [1108, 1120, 1125, 1138, 1195], "popular": [1108, 1121, 1187], "outsid": [1108, 1110, 1116, 1119, 1126, 1131, 1135, 1137], "genom": 1108, "sphere": 1108, "althono": 1108, "primer": [1108, 1114, 1169], "john": 1108, "characterist": [1108, 1115, 1119, 1120, 1139, 1169, 1176], "silent": 1108, "coher": [1108, 1128, 1173, 1184], "comprehens": [1108, 1131], "expos": [1108, 1116, 1169], "bioontologi": [1108, 1131], "framework": [1108, 1111, 1122], "agroport": 1108, "ecoport": 1108, "oppos": 1108, "isn": [1108, 1119], "tautologi": [1108, 1169], "strategi": [1108, 1113, 1181, 1183], "oborel": 1108, "ebi": [1108, 1157], "ac": 1108, "uk": 1108, "awai": [1108, 1137, 1173], "while": [1108, 1118, 1138, 1168], "measur": [1108, 1113, 1169, 1180], "wherea": [1108, 1110], "log2": [1108, 1180], "taken": [1108, 1110], "account": [1108, 1120, 1131], "observ": 1108, "realpython": 1108, "regardless": [1108, 1117, 1132, 1137, 1139, 1143], "worldview": 1108, "distinguish": [1109, 1160], "reflect": 1109, "occasion": 1109, "urea": 1109, "cycl": 1109, "ornithin": 1109, "biosynthesi": 1109, "boost": 1109, "below": 1109, "reli": [1109, 1168], "phrase": 1109, "pten": 1109, "risk": 1109, "breast": 1109, "cancer": 1109, "malign": 1109, "neoplasm": 1109, "funk": 1109, "2016": 1109, "neutral": [1109, 1179], "priorit": 1109, "manu": [1109, 1119, 1179], "scientif": 1109, "medic": 1109, "favor": [1109, 1132, 1134, 1182], "layperson": 1109, "vasilevski": 1109, "diagnosi": 1109, "70": 1109, "sweet": 1109, "mint": 1109, "variat": 1109, "area": 1109, "consensu": 1109, "english": [1109, 1118, 1169], "untyp": 1109, "entity_alias": [1109, 1169, 1173], "0001698": 1109, "fluid": 1109, "pericardi": 1109, "effus": 1109, "simplist": [1109, 1169], "alias_relationship": 1109, "exclude_label": 1109, "tabl": [1109, 1112, 1120, 1131, 1165, 1184], "obograph_datamodel": 1109, "spv": 1109, "synonym_property_valu": 1109, "0000": 1109, "0002": 1109, "6548": 1109, "5200": 1109, "ag": 1110, "onset": 1110, "challeng": [1110, 1133], "administr": 1110, "constitut": 1110, "pragmat": 1110, "emphas": 1110, "invari": 1110, "conting": 1110, "treatment": 1110, "beyond": [1110, 1169, 1195], "gruber": 1110, "todai": 1110, "biomed": [1110, 1131, 1153], "minimalist": 1110, "supplement": 1110, "lacrim": 1110, "gland": [1110, 1150], "morphologi": [1110, 1119, 1147], "wget": [1110, 1112, 1126, 1131, 1137], "0011482": 1110, "unif": 1110, "biologi": 1110, "inclus": 1111, "quickstart": 1111, "intro": 1111, "environment": 1111, "glacier": 1111, "lake": 1111, "ocean": 1111, "hierarch": [1111, 1131, 1169], "articl": 1111, "shown": 1111, "drawn": 1111, "patient": [1111, 1185], "rich": 1111, "introduct": [1111, 1113, 1129, 1130], "book": [1111, 1114], "xml": [1111, 1137, 1161, 1185], "manchest": [1111, 1185], "thesauri": 1111, "clinic": [1111, 1120], "rrf": 1111, "lightweight": [1111, 1132], "0005671": 1111, "bilater": 1111, "intracerebr": 1111, "calcif": 1111, "0005676": 1111, "rudimentari": 1111, "postaxi": 1111, "polydactyli": 1111, "0005678": 1111, "anterior": [1111, 1119], "atlanto": 1111, "occipit": 1111, "disloc": 1111, "oboacademi": 1111, "themselv": [1111, 1120, 1142, 1168, 1180], "compress": [1112, 1147, 1169], "uberon_0000948": 1112, "foundri": [1112, 1118, 1133, 1158, 1169], "under": [1112, 1116, 1120, 1131, 1165], "hood": [1112, 1116, 1165], "similarli": 1112, "curie_to_uri": [1112, 1169, 1173], "po": 1112, "po_": 1112, "poro": 1112, "poro_": 1112, "2002": 1112, "07": [1112, 1143], "2004": 1112, "02": 1112, "suffic": 1112, "soil_oi": 1112, "soil": [1112, 1118], "nt": [1112, 1118], "prefix_map": [1112, 1118, 1169, 1173], "soilprofil": [1112, 1118], "anzsoil": [1112, 1118], "def": [1112, 1118, 1131, 1132], "au": [1112, 1118], "asl": [1112, 1118], "uppercas": 1112, "pad": 1112, "7": [1112, 1129, 1130, 1174], "digit": [1112, 1115, 1133, 1179], "latest": 1112, "schemaorg": 1112, "explan": 1113, "nlp": 1113, "signatur": [1113, 1168, 1176, 1195], "accompani": [1113, 1195], "vector": 1113, "overview": [1115, 1131], "realli": 1115, "browser": [1115, 1135], "fingernail": 1115, "uberon_0009565": 1115, "dedic": 1115, "parthood": 1115, "autom": 1115, "amount": [1115, 1121, 1143, 1147], "deal": 1115, "mistak": 1115, "0009565": 1115, "0001705": 1115, "0002389": 1115, "definedclassid_label": 1115, "genusids_label": 1115, "restrictionspropertyid": 1115, "restrictionspropertyids_label": 1115, "restrictionsfillerid": 1115, "restrictionsfillerids_label": 1115, "0009567": 1115, "pedal": 1115, "0001466": 1115, "0011273": 1115, "0001463": 1115, "0011274": 1115, "0003622": 1115, "0011275": 1115, "0003623": 1115, "0011276": 1115, "0003624": 1115, "0011277": 1115, "0003625": 1115, "0011278": 1115, "0003631": 1115, "0011279": 1115, "0003632": 1115, "0011280": 1115, "0003633": 1115, "0011281": 1115, "0003634": 1115, "0011282": 1115, "0003635": 1115, "matrix": 1115, "intersection_of": 1115, "ahead": [1115, 1119], "prone": 1115, "templat": [1115, 1154, 1167], "dosdp": 1115, "ottr": 1115, "experienc": [1115, 1132], "aid": 1115, "creation": [1115, 1174], "saw": [1115, 1131], "At": [1115, 1131, 1142], "lattic": 1115, "brain": [1116, 1151, 1162], "0000008": 1116, "mapping_justif": 1116, "semapv": 1116, "unspecifiedmatch": 1116, "hba": 1116, "4005": 1116, "0000168": 1116, "mat": 1116, "0000098": 1116, "caloha": 1116, "0095": 1116, "dhba": 1116, "10155": 1116, "efo": 1116, "0000302": 1116, "interchang": [1117, 1195], "longer": 1117, "discov": 1117, "fairli": [1117, 1119, 1133, 1195], "myo": [1117, 1195], "123456": [1117, 1195], "is_obsolet": [1117, 1195], "0040180": 1117, "hyperkeratosi": 1117, "pilari": 1117, "0040193": 1117, "pinealoblastoma": 1117, "0040199": 1117, "midfac": 1117, "older": [1117, 1195], "obsoleteclass": [1117, 1195], "evalu": [1117, 1195], "entity_metadata": [1117, 1195], "0000005": [1117, 1195], "assist": 1117, "assembli": 1117, "ribosom": 1117, "subunit": 1117, "vivo": 1117, "assembl": 1117, "0042254": 1117, "0044183": 1117, "0051082": 1117, "chaperon": 1117, "molecular_funct": [1117, 1125, 1155, 1169], "molecular": 1117, "mondo": [1117, 1168, 1169], "extrem": [1117, 1118], "lost": 1117, "alt_id": [1117, 1169], "x1": 1117, "0000227": 1117, "stanza": [1117, 1169], "nodeobsolet": 1117, "guarante": [1118, 1161, 1171, 1195], "ontologymetadatamapp": [1118, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "vocab": 1118, "curie_convert": [1118, 1144, 1145, 1146, 1147, 1148], "use_skos_profil": 1118, "ontology_metamodel_mapp": [1118, 1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "void": 1118, "crack": 1118, "medium": 1118, "coars": 1118, "happen": 1118, "infrequ": 1118, "interer": 1118, "idiom": 1119, "perhap": 1119, "surprisingli": 1119, "heavili": 1119, "pe": 1119, "0002387": 1119, "0002103": 1119, "0006871": 1119, "0002551": 1119, "0001445": 1119, "0002470": 1119, "0008784": 1119, "0002102": 1119, "0006875": 1119, "0001442": 1119, "0008785": 1119, "hindlimb": 1119, "embryon": 1119, "footplat": 1119, "skeleton": 1119, "autopod": [1119, 1133], "region": [1119, 1162], "segment": 1119, "handplat": 1119, "triad": 1119, "0000002": 1119, "continu": [1119, 1131], "0000004": 1119, "0000040": 1119, "materi": [1119, 1131], "0000026": 1119, "appendag": [1119, 1131], "0000061": 1119, "anatom": [1119, 1131, 1169], "0000153": 1119, "bodi": [1119, 1131, 1168], "0000465": 1119, "0000468": 1119, "multicellular": 1119, "0000475": 1119, "subdivis": [1119, 1133], "0001062": [1119, 1133], "0002101": [1119, 1151, 1168, 1174], "deduct": [1119, 1184], "tell": 1119, "hope": [1119, 1137], "furthermor": 1119, "meaningless": 1119, "concret": 1119, "0012505": [1119, 1169], "endomembran": [1119, 1169], "0110165": [1119, 1169], "cellular": [1119, 1169], "has_part": [1119, 1169], "0043231": [1119, 1161, 1169, 1175], "intracellular": [1119, 1161, 1169], "bound": [1119, 1161, 1169], "organel": [1119, 1156, 1161, 1169, 1183], "0043227": 1119, "0043226": [1119, 1156, 1183], "0043229": 1119, "typedef": 1119, "0000051": [1119, 1169], "inverse_of": 1119, "0002131": 1119, "holds_over_chain": 1119, "simplifi": [1119, 1142, 1169, 1185], "demo": [1119, 1132], "len": [1119, 1170, 1175], "obograph_interfac": [1119, 1175], "graphtraversalmethod": [1119, 1175], "advantag": [1119, 1131, 1138, 1143], "include_entail": [1119, 1133, 1169, 1182], "_e": 1119, "target_curi": [1119, 1175], "liquid": 1119, "0001735": 1119, "hop_anc": 1119, "ent_anc": 1119, "9": [1119, 1131, 1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "recal": 1119, "mislead": 1119, "has_part_with_characterist": 1119, "odd": 1119, "imagin": 1119, "charg": 1119, "anticip": 1119, "care": [1119, 1142], "topic": 1119, "reader": 1119, "who": 1119, "wonder": 1119, "mention": 1119, "mesentericvein": 1119, "drain": 1119, "smallintestin": 1119, "vein": [1119, 1131, 1135], "closer": 1120, "music": 1120, "genr": 1120, "favorit": 1120, "newer": 1120, "theori": [1120, 1137, 1142], "j": 1120, "frac": 1120, "cap": 1120, "cup": 1120, "choic": [1120, 1168], "partof": 1120, "indirectli": 1120, "resnik": 1120, "kg": 1120, "leaf": [1120, 1169, 1173], "bia": 1120, "e1": 1120, "e2": 1120, "goal": [1120, 1126, 1184, 1195], "simplest": 1120, "max_": 1120, "t1": 1120, "t2": 1120, "averag": 1120, "bma": 1120, "sum_": 1120, "termset": 1120, "0010771": 1120, "0002169": 1120, "0005391": 1120, "0005389": 1120, "0005367": 1120, "substitut": 1120, "formul": [1120, 1169, 1178], "hot": 1120, "bit": [1120, 1131], "cosin": 1120, "numpi": 1120, "effici": [1120, 1131, 1137, 1184], "reduc": 1120, "dimension": 1120, "grape": 1120, "ml": 1120, "curategpt": [1120, 1122], "lord": 1120, "pubm": 1120, "nlm": 1120, "nih": 1120, "gov": 1120, "12603061": 1120, "koehler": 1120, "genet": 1120, "19800049": 1120, "healthcar": 1121, "interoper": 1121, "exchang": [1121, 1168], "codesystem": [1121, 1147, 1148], "agre": [1121, 1168], "server": [1121, 1125, 1143, 1147, 1158], "dump": [1121, 1144, 1145, 1146, 1147, 1148, 1171, 1172, 1173], "fhir_config_exampl": 1121, "code_system_id": [1121, 1147], "_the": 1121, "identif": [1121, 1147], "hl7": [1121, 1147], "code_system_url": [1121, 1147], "_canon": 1121, "native_uri_stem": [1121, 1147], "_a": 1121, "omim": [1121, 1147], "phenotypicseri": [1121, 1147], "include_all_pred": [1121, 1147], "maxim": [1121, 1147], "use_curies_native_concept": [1121, 1147], "_fhir": [1121, 1147], "convention": [1121, 1147], "use_curies_foreign_concept": [1121, 1147], "_typic": 1121, "predicate_period_replac": [1121, 1147], "_predic": 1121, "hapi": [1121, 1147], "caus": [1121, 1147], "underscor": [1121, 1128, 1147], "hp_": 1121, "obtain": [1122, 1175], "caveat": 1122, "discuss": 1122, "pypi": [1122, 1130], "talisman": 1122, "conjunct": 1122, "mixtral": 1122, "ollama": 1122, "litellm": 1122, "groq": 1122, "leverag": [1125, 1176, 1183], "extract": [1125, 1175, 1181, 1183], "autosuggest": 1125, "window": 1125, "datasett": 1125, "pipx": 1125, "inject": 1125, "proxi": [1125, 1169], "unpredict": 1125, "ey": [1125, 1155], "toe": 1125, "gpt": 1125, "jsonl": 1125, "turbo": 1125, "awesom": [1125, 1128], "gemini": 1125, "pro": [1125, 1139, 1142], "cd": [1125, 1131, 1132], "openai": 1125, "stabl": 1125, "model_nam": 1125, "model_id": 1125, "api_bas": 1125, "8000": 1125, "soup": 1125, "hardwar": 1125, "llama2": 1125, "bash": 1125, "8x7b": 1125, "32768": 1125, "yourself": 1126, "bucket": 1126, "amazonaw": [1126, 1137], "bbop": [1126, 1137], "pip": [1126, 1128, 1131], "caro": 1126, "0000003": [1126, 1169], "0000006": 1126, "validatorinterfac": [1126, 1173, 1184], "sqldatabas": [1126, 1165, 1176, 1184], "cmungal": 1126, "plug": [1128, 1131], "ins": 1128, "enabl": [1128, 1162], "nltk": 1128, "wouldn": 1128, "drop": 1128, "my_awesome_plugin": 1128, "unsat": 1128, "get_resource_from_shorthand": [1128, 1185], "discovered_plugin": 1128, "oakx_robot": 1128, "robot_implement": 1128, "robotimplement": 1128, "owl_noth": 1128, "oi": [1128, 1156, 1158], "is_coher": [1128, 1173, 1184], "congratul": 1128, "els": [1128, 1137], "usatisfi": 1128, "unsatisfiable_class": [1128, 1173, 1184], "someon": 1128, "rememb": 1128, "pollut": 1128, "pyproject": 1128, "toml": 1128, "setuptool": 1128, "6": [1129, 1130], "glossari": 1129, "faq": 1129, "graphviz": 1130, "docker": 1130, "rdbmss": 1130, "drosophila": 1131, "fruit": 1131, "fly": [1131, 1174], "mkdir": 1131, "virtual": 1131, "python3": [1131, 1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "venv": 1131, "bin": 1131, "pythonpath": 1131, "invok": [1131, 1135], "wing": [1131, 1135], "00004751": [1131, 1135], "shorter": 1131, "sound": 1131, "introduc": [1131, 1134], "00004754": 1131, "axillari": 1131, "00004759": 1131, "l1": 1131, "00004760": 1131, "l2": 1131, "00046009": 1131, "presumpt": 1131, "00046030": 1131, "00046031": 1131, "l3": 1131, "00004761": 1131, "00004762": 1131, "l4": 1131, "00004763": 1131, "l5": 1131, "00004764": 1131, "l6": 1131, "filenam": 1131, "got": 1131, "cuticl": 1131, "00004729": 1131, "00007000": 1131, "effect": 1131, "visit": [1131, 1137, 1169], "00007245": 1131, "cuticular": 1131, "00006015": 1131, "blade": 1131, "00007010": 1131, "tissu": 1131, "00004551": 1131, "thorax": 1131, "10000000": 1131, "00007016": 1131, "00007001": 1131, "00007013": 1131, "acellular": 1131, "unbound": 1131, "tempt": 1131, "partonomi": 1131, "sinc": [1131, 1169, 1174, 1185], "00047212": 1131, "longitudin": 1131, "brief": 1131, "referenti": 1131, "blazegraph": 1131, "tradeoff": 1131, "obviou": 1131, "15356": 1131, "sulfur": 1131, "amino": 1131, "acid": 1131, "propano": 1131, "sulfanyl": 1131, "beilstein": 1131, "1721406": 1131, "ca": [1131, 1180], "3374": 1131, "22": [1131, 1175], "33704": 1131, "alpha": [1131, 1138], "26167": 1131, "polar": 1131, "26834": 1131, "isa": [1131, 1169], "life": 1131, "apikei": [1131, 1151], "kill": 1131, "rout": 1131, "forebrain": 1131, "0000099": 1131, "pref": 1131, "11": [1131, 1183], "0001890": 1131, "16": 1131, "24": 1131, "breadth": 1131, "offer": [1131, 1138], "mapping_provid": 1131, "25181601": 1131, "unspecifi": 1131, "cdno": 1131, "17439666": 1131, "kegg": 1131, "c00736": 1131, "knapsack": 1131, "c00007323": 1131, "zp": 1131, "feel": 1132, "advis": 1132, "stick": 1132, "adaptor": 1132, "connector": 1132, "my_oak_demo": 1132, "4023017": 1132, "sst": 1132, "gabaerg": 1132, "cortic": 1132, "cerebr": 1132, "cortex": [1132, 1153], "somatostatin": 1132, "outgo": [1132, 1169], "0002292": 1132, "000015665": 1132, "0010011": 1132, "show_info": 1132, "term_id": [1132, 1133], "outgoing_relationship": [1132, 1169, 1173], "queryabl": 1133, "lov": 1133, "bspo": 1133, "0002544": 1133, "32523": 1133, "0005881": 1133, "compos": 1134, "philosophi": 1134, "illustr": [1134, 1140], "obographinterfac": [1134, 1135, 1173, 1175], "dao": 1134, "smarter": 1134, "network": [1135, 1142, 1143], "javascript": 1135, "npm": 1135, "yarn": 1135, "preview": 1135, "temp": 1135, "immedi": 1135, "test_obograph_util": 1135, "until": 1136, "v0": 1136, "wait": [1136, 1143], "pull": 1136, "1686": 1136, "gzip": 1137, "enter": 1137, "center": [1137, 1175], "0007011": 1137, "0002005": 1137, "nervou": [1137, 1147], "0002100": 1137, "soma": 1137, "0002607": 1137, "migratori": 1137, "neural": 1137, "crest": 1137, "0000029": 1137, "0000107": 1137, "autonom": 1137, "suffix": [1137, 1166, 1185], "shape": [1137, 1184], "semsql": [1137, 1165], "pwd": 1137, "ti": 1137, "odkful": 1137, "recip": 1137, "prerequisit": 1137, "rdftab": [1137, 1165], "riot": 1137, "maco": 1137, "homebrew": 1137, "brew": 1137, "jena": 1137, "seamlessli": 1137, "rdbm": 1137, "tester": 1138, "fraction": 1138, "dsl": 1138, "optimis": 1138, "obsolete_class": 1138, "classobsolet": 1138, "queue": 1138, "deploi": 1138, "inapplic": 1138, "memori": [1138, 1142, 1143, 1156], "toolkit": 1139, "modif": 1139, "filesystem": [1139, 1165], "basic_search": [1139, 1150, 1173, 1179], "outgoing_relationship_map": [1139, 1169, 1173], "receptor": 1139, "0000827": 1139, "0002215": 1139, "0002456": 1139, "mediat": 1139, "0000542": 1139, "logo": 1140, "jmcmurri": 1140, "master": 1140, "mostli": 1142, "pictur": 1142, "client": [1142, 1151, 1157, 1160], "0001825": 1142, "paranas": 1142, "sinu": 1142, "great": 1142, "latenc": [1142, 1143], "burden": 1142, "dron": 1142, "80": [1142, 1169], "demand": 1142, "terminolog": 1142, "unlik": 1142, "scalar": [1142, 1169], "dict": [1142, 1146, 1156, 1157, 1161, 1163, 1165, 1168, 1169, 1171, 1174, 1175, 1177, 1180, 1182, 1183, 1184], "autocomplet": 1142, "robust": 1143, "hsapdv": 1143, "0000013": 1143, "0000014": [1143, 1169], "anti": 1143, "carnegi": 1143, "08": 1143, "ineffici": [1143, 1175], "sizeabl": 1143, "iterator_util": 1143, "curie_it": 1143, "slightli": 1143, "boilerpl": 1143, "consider": 1143, "test_click": 1143, "data_model_convert": 1144, "datamodelconvert": [1144, 1145], "callabl": [1144, 1146, 1147, 1148, 1179, 1183, 1196], "enforce_canonical_ord": [1144, 1145, 1146, 1147, 1148, 1172], "kwarg": [1144, 1146, 1147, 1148, 1165, 1168, 1169, 1171, 1172, 1174, 1175, 1177, 1179, 1180, 1183, 1185, 1196], "obograph_util": [1145, 1167], "load_obograph_docu": 1145, "graph_doc": 1145, "obographtofhirconvert": [1145, 1147], "obographtooboformatconvert": [1145, 1148], "as_bytes_io": [1145, 1148], "obo_graph_to_cx_convert": 1146, "obographtocxconvert": 1146, "obo_graph_to_fhir_convert": 1147, "concept_": 1147, "conceptproperty_": 1147, "direct_predicate_map": 1147, "conceptdesignation_": 1147, "coding_": 1147, "scope_map": 1147, "my_prefix": 1147, "my_expans": 1147, "codingsystem": 1147, "linkml_runtim": [1147, 1165, 1171], "dumper": [1147, 1167, 1171, 1173], "json_dump": 1147, "loader": 1147, "json_load": 1147, "hp_test": 1147, "target_class": 1147, "code_system": 1147, "0012639": 1147, "anomali": [1147, 1169], "obo_graph_to_obo_format_convert": 1148, "use_shorthand": 1148, "bytesio": 1148, "obodocu": [1148, 1163], "aggregator_implement": 1150, "aggregatorimplement": [1150, 1154], "ontologyresourc": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "_multilingu": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "factori": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "exclude_owl_top_and_bottom": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "ontology_metadata_mapp": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "_convert": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "auto_relax_axiom": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "cache_lookup": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "property_cach": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "keyval_cach": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "keyvalcach": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "_edge_index": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "edge_index": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "edgeindex": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "_entailed_edge_index": [1150, 1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184], "farm": 1150, "weav": 1150, "cfg": [1150, 1179, 1196], "agg": 1150, "parathyroid": 1150, "0000860": 1150, "hypoplasia": 1150, "0000680": 1150, "tentacl": 1151, "multiword": 1151, "octopu": 1151, "crucial": 1151, "funowl_implement": 1152, "funowlimplement": 1152, "functional_writ": [1152, 1159, 1161, 1163, 1165, 1176], "writer": [1152, 1159, 1161, 1163, 1165, 1176], "functionalwrit": [1152, 1159, 1161, 1163, 1165, 1176], "home": [1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "runner": [1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "pypoetri": [1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "virtualenv": [1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "5bvmowl": [1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "py3": [1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "lib": [1152, 1158, 1159, 1161, 1163, 1164, 1165, 1166, 1176], "ontology_docu": 1152, "ontologydocu": 1152, "_kwarg": [1152, 1153, 1156, 1157, 1158, 1159, 1160, 1161, 1163, 1164, 1165, 1166], "hsolbrig": 1152, "gildaimplement": [1153, 1154], "grounder": 1153, "gyori2021": 1153, "benjamin": 1153, "gyori": 1153, "charl": 1153, "taplei": 1153, "hoyt": 1153, "albert": 1153, "steppi": 1153, "2021": 1153, "disambigu": 1153, "volum": 1153, "vbac034": 1153, "prontoimplement": [1154, 1161], "sqlimplement": [1154, 1165, 1185], "alchemi": 1154, "olsimplement": [1154, 1157], "simpleoboimplement": [1154, 1163], "obographimplement": [1154, 1156], "sparqlimplement": [1154, 1164, 1166], "ubergraphimplement": [1154, 1166], "relationgraphenum": [1154, 1166], "ontobeeimplement": [1154, 1158], "pantherdb": [1154, 1167], "pantherdbimplement": [1154, 1160], "use_llm": 1155, "mappergpt": 1155, "rhea": 1155, "obograph_implement": [1156, 1161], "obograph_docu": 1156, "_relationship_index_cach": [1156, 1161, 1163], "node_id": 1156, "embl": 1157, "oxo": 1157, "ols_implement": 1157, "label_cach": 1157, "_prefix_map": [1157, 1165], "focus_ontologi": 1157, "ontobee_implement": 1158, "sparql_wrapp": [1158, 1159, 1164, 1166], "sparqlwrapp": [1158, 1159, 1164, 1166], "_list_of_named_graph": [1158, 1159, 1164, 1166], "Or": [1158, 1161, 1162, 1169, 1195], "vaccin": 1158, "vo": 1158, "uncom": 1158, "owlery_implement": 1159, "owleryimplement": 1159, "phenoscap": 1159, "uniprotkb": [1160, 1174], "p04217": 1160, "pantherdb_implement": 1160, "_association_index": [1160, 1161, 1164, 1165, 1168, 1170], "association_index": [1160, 1161, 1164, 1165, 1168, 1170], "associationindex": [1160, 1161, 1164, 1165, 1168, 1170], "association_provider_interfac": [1160, 1161, 1164, 1165, 1168, 1170], "entitynorm": [1160, 1161, 1164, 1165, 1168, 1170], "_requests_sess": 1160, "requests_cach": 1160, "session": 1160, "cachedsess": 1160, "taxon_id": 1160, "use_protein_id": 1160, "assoc": [1160, 1168, 1170], "0005576": 1160, "pronto_implement": 1161, "wrapped_ontologi": 1161, "_alt_id_to_replacement_map": [1161, 1163], "slug": [1161, 1185], "fastobo": 1161, "tabularinterfac": 1162, "drive": 1162, "biobank": 1162, "specimen": 1162, "robottempl": 1162, "templatestempl": 1162, "facilit": 1162, "0002516": [1162, 1169], "0003357": 1162, "atla": 1162, "new_templ": 1162, "simple_obo_implement": 1163, "obo_docu": 1163, "simple_obo_pars": 1163, "_uses_legacy_properti": 1163, "primarili": 1163, "abandon": 1163, "sqlitefil": 1165, "sqldb": 1165, "sql_implement": [1165, 1185], "engin": 1165, "_session": 1165, "_connect": 1165, "_ontology_metadata_model": 1165, "schemaview": 1165, "_information_content_cach": 1165, "_relationships_by_subject_index": 1165, "max_items_for_in_claus": 1165, "can_store_associ": 1165, "ontologyinterfac": [1165, 1169, 1172, 1185], "postgresql": 1165, "sqlalchemi": 1165, "classmethod": 1165, "sqla": 1165, "ever": 1165, "craft": 1165, "throttl": 1166, "overus": 1166, "larger": [1166, 1182], "hippocampu": [1166, 1183], "ubergraph_implement": 1166, "ug": 1166, "relationship_walk": 1167, "networkx_bridg": 1167, "slimmer_util": 1167, "apikey_manag": 1167, "associationproviderinterfac": [1168, 1173, 1185], "mpo": 1168, "gpad": 1168, "kgx": 1168, "augment": 1168, "inputspecif": [1168, 1185], "pombas": [1168, 1170], "amigo_implement": 1168, "10090": 1168, "mous": 1168, "property_filt": 1168, "subject_closure_pred": 1168, "predicate_closure_pred": 1168, "object_closure_pred": [1168, 1170, 1180], "include_modifi": 1168, "add_closure_field": 1168, "spac1142": [1168, 1170], "02c": [1168, 1170], "spac3h1": [1168, 1170], "06": [1168, 1170], "spac4g8": [1168, 1170], "0006620": [1168, 1170], "protein": [1168, 1170], "endoplasm": [1168, 1170], "reticulum": [1168, 1170], "sgt2": 1168, "associations_subject": [1168, 1173], "0045047": 1168, "spbc1271": 1168, "05c": 1168, "associations_subject_search": [1168, 1173], "subject_prefix": [1168, 1174], "include_similarity_object": 1168, "sort_by_similar": 1168, "semanticsimilarityinterfac": [1168, 1173, 1180], "association_pairwise_coassoci": [1168, 1173], "curies1": 1168, "curies2": 1168, "inputs_are_subject": 1168, "include_reciproc": 1168, "include_diagon": 1168, "include_ent": 1168, "0000910": 1168, "0006281": 1168, "0006412": 1168, "coassoc": 1168, "add_associ": [1168, 1173, 1185], "association_count": [1168, 1173], "association_subject_count": [1168, 1173], "num": 1168, "0051668": 1168, "map_associ": [1168, 1173], "subset_ent": 1168, "map2slim": 1168, "normalize_associ": [1168, 1173], "payload": [1169, 1183], "fit": [1169, 1195], "horsetail": 1169, "granular": 1169, "BE": 1169, "children": [1169, 1175], "rais": [1169, 1174, 1175, 1177], "transact": [1169, 1171, 1172, 1174, 1178, 1179, 1181, 1184], "commit": [1169, 1171, 1172, 1174, 1177, 1178, 1179, 1181, 1184], "default_prefix_map": 1169, "get_prefix_map": [1169, 1173], "go_0005634": 1169, "set_metamodel_map": [1169, 1173], "uri_to_curi": [1169, 1173], "use_uri_fallback": 1169, "entailed_edge_index": [1169, 1173], "default_languag": [1169, 1173], "null": 1169, "ontology_curi": [1169, 1173], "all_ontology_curi": [1169, 1173], "include_merg": 1169, "obsolesc": 1169, "obsoletes_migration_relationship": [1169, 1173], "all_obsolete_curi": [1169, 1173], "refus": 1169, "ontology_vers": [1169, 1173], "ontology_metadata_map": [1169, 1173], "filter_obsolet": 1169, "owl_object_properti": 1169, "metaclass": 1169, "all_entity_curi": [1169, 1173], "synonymtypeproperti": 1169, "owl2": 1169, "entity_declar": 1169, "pun": 1169, "defined_bi": [1169, 1173], "ignore_owl_th": 1169, "annotated_root": 1169, "0100026": 1169, "exhibit": 1169, "messi": 1169, "0003674": 1169, "0005575": 1169, "cellular_compon": 1169, "biological_process": 1169, "artifici": 1169, "ignore_owl_noth": 1169, "goslim_drosophila": 1169, "goslim_flybase_ribbon": 1169, "subset_curi": [1169, 1173], "all_subset_curi": [1169, 1173], "subset_memb": [1169, 1173], "0005635": 1169, "envelop": 1169, "terms_subset": [1169, 1173], "goslim_yeast": 1169, "goslim_chembl": 1169, "terms_categori": [1169, 1173], "curies_by_subset": [1169, 1173], "internation": 1169, "ph\u00e9notypiqu": 1169, "get_label_by_curi": [1169, 1173], "allow_non": 1169, "multilingual_label": [1169, 1173], "fenotypisch": 1169, "abnormaliteit": 1169, "get_labels_for_curi": [1169, 1173], "set_label": [1169, 1173], "curies_by_label": [1169, 1173], "circumst": 1169, "get_curies_by_label": [1169, 1173], "0016772": [1169, 1174], "31": 1169, "snip": 1169, "include_tbox": 1169, "include_abox": 1169, "exclude_blank": 1169, "incom": 1169, "relationships_metadata": [1169, 1173], "0009831": 1169, "c9005": 1169, "hierarchical_par": [1169, 1173], "isa_onli": 1169, "fresh": 1169, "invoc": [1169, 1183], "rp": [1169, 1178], "incoming_relationship_map": [1169, 1173], "ref": 1169, "incoming_relationship": [1169, 1173], "all_relationship": [1169, 1173], "defn": 1169, "include_metadata": [1169, 1175], "goc": 1169, "go_cur": 1169, "isbn": 1169, "0198547684": 1169, "include_miss": 1169, "get_definition_by_curi": [1169, 1173], "simple_mappings_by_curi": [1169, 1173], "sophist": 1169, "mappingproviderinterfac": [1169, 1173, 1174], "simple_map": [1169, 1173], "lump": 1169, "aliases_by_curi": [1169, 1173], "entity_alias_map": [1169, 1173], "deem": 1169, "alias_map_by_curi": [1169, 1173], "alias_map": 1169, "entity_metadata_map": [1169, 1173], "entities_metadata_stat": [1169, 1173], "include_nested_metadata": 1169, "add_missing_property_valu": [1169, 1173], "metadata_map": 1169, "create_ent": [1169, 1173], "delete_ent": [1169, 1173], "thu": 1169, "portabl": 1169, "clone": [1169, 1173], "precompute_lookup": [1169, 1173], "precomput": 1169, "repeatedli": 1169, "class_enrichment_calculation_interfac": 1170, "classenrichmentcalculationinterfac": [1170, 1173], "membership": 1170, "enriched_class": [1170, 1173], "item_list": 1170, "hypothes": 1170, "filter_redund": 1170, "sort_bi": 1170, "signific": 1170, "threshold": 1170, "odds_ratio": 1170, "create_self_associ": [1170, 1173], "0031965": 1170, "0016020": [1170, 1183], "004": 1170, "differ_interfac": 1171, "differinterfac": [1171, 1173], "grouped_diff": [1171, 1173], "diffconfigur": 1171, "yaml_dump": 1171, "path1": 1171, "path2": 1171, "noderenam": [1171, 1177], "old_valu": 1171, "catalyt": 1171, "new_valu": 1171, "enzym": 1171, "about_nod": 1171, "0003824": 1171, "sequenc": 1171, "diff_summari": [1171, 1173], "compare_ontology_term_list": [1171, 1173], "dumper_interfac": 1172, "dumperinterfac": [1172, 1173], "stdout": 1172, "search_interfac": [1173, 1179], "searchinterfac": [1173, 1179], "multiterm_search": [1173, 1179], "subsetterinterfac": [1173, 1181], "extract_subset_ontologi": [1173, 1181], "gap_fill_relationship": [1173, 1181], "term_curies_without_definit": [1173, 1184], "validate_map": [1173, 1184], "relationgraphinterfac": [1173, 1178], "entailed_outgoing_relationship": [1173, 1178], "entailed_incoming_relationship": [1173, 1178], "entailed_relationships_between": [1173, 1178], "sssom_mappings_by_sourc": [1173, 1174], "all_sssom_map": [1173, 1174], "get_sssom_mappings_by_curi": [1173, 1174], "get_transitive_mappings_by_curi": [1173, 1174], "normalize_prefix": [1173, 1174], "create_normalization_map": [1173, 1174], "enable_transitive_query_cach": [1173, 1175], "disable_transitive_query_cach": [1173, 1175], "synonym_map_for_curi": [1173, 1175], "ancestor_graph": [1173, 1175], "descendant_graph": [1173, 1175], "descendant_count": [1173, 1175], "subgraph_from_travers": [1173, 1175], "extract_graph": [1173, 1175], "relationships_to_graph": [1173, 1175], "walk_up_relationship_graph": [1173, 1175], "logical_definit": [1173, 1175], "disjoint_class_expressions_axiom": [1173, 1175], "add_metadata": [1173, 1175], "as_obograph": [1173, 1175], "load_graph": [1173, 1175], "traversalconfigur": [1173, 1175], "textannotatorinterfac": [1173, 1183], "cache_directori": [1173, 1183], "rule_collect": [1173, 1183], "annotate_text": [1173, 1183], "annotate_fil": [1173, 1183], "annotate_tabular_fil": [1173, 1183], "summarystatisticsinterfac": [1173, 1182], "global_summary_statist": [1173, 1182], "branch_summary_statist": [1173, 1182], "metadata_property_summary_statist": [1173, 1182], "summary_statistic_descript": [1173, 1182], "auto_add_contributor_us": [1173, 1177], "ignore_invalid_chang": [1173, 1177], "apply_patch": [1173, 1177], "expand_chang": [1173, 1177], "undo": [1173, 1177], "reverse_chang": [1173, 1177], "cached_information_content_map": [1173, 1180], "most_recent_common_ancestor": [1173, 1180], "setwise_most_recent_common_ancestor": [1173, 1180], "multiset_most_recent_common_ancestor": [1173, 1180], "common_ancestor": [1173, 1180], "get_information_cont": [1173, 1180], "information_content_scor": [1173, 1180], "pairwise_similar": [1173, 1180], "all_by_all_pairwise_similar": [1173, 1180], "subclass_axiom": [1173, 1176], "equivalence_axiom": [1173, 1176], "annotation_assertion_axiom": [1173, 1176], "disjoint_pair": [1173, 1176], "is_disjoint": [1173, 1176], "is_satisfi": [1173, 1176], "reasoner_configur": [1173, 1176], "axiom_is_about": [1173, 1176], "axiom_refer": [1173, 1176], "property_characterist": [1173, 1176], "transitive_object_properti": [1173, 1176], "simple_subproperty_of_chain": [1173, 1176], "overridden": 1173, "mapping_provider_interfac": 1174, "sssom_util": 1174, "central": 1174, "ec": 1174, "subject_or_object_sourc": 1174, "target_prefix": 1174, "source_prefix": 1174, "prefix_alias_map": 1174, "uniprot": 1174, "p12345": 1174, "nmap": 1174, "cell_nucleu": 1174, "object_prefix": 1174, "expand_curi": 1175, "start_curi": 1175, "interact": 1175, "opposit": 1175, "downward": 1175, "up_dist": 1175, "down_dist": 1175, "27": 1175, "ldef": 1175, "0009892": 1175, "regul": 1175, "metabol": 1175, "decor": 1175, "notimplementederror": 1175, "impract": 1175, "owl_interfac": 1176, "_funowl_datamodel": 1176, "owleri": 1176, "py4j": 1176, "superclass": 1176, "reasonerconfigur": 1176, "criterion": 1176, "annotationassert": 1176, "disjointclass": 1176, "subobjectpropertyof": 1176, "equivalentobjectproperti": 1176, "disjointobjectproperti": 1176, "inverseobjectproperti": 1176, "objectpropertydomain": 1176, "objectpropertyrang": 1176, "functionalobjectproperti": 1176, "inversefunctionalobjectproperti": 1176, "reflexiveobjectproperti": 1176, "irreflexiveobjectproperti": 1176, "symmetricobjectproperti": 1176, "asymmetricobjectproperti": 1176, "transitiveobjectproperti": 1176, "subdatapropertyof": 1176, "equivalentdataproperti": 1176, "disjointdataproperti": 1176, "datapropertydomain": 1176, "datapropertyrang": 1176, "functionaldataproperti": 1176, "datatypedefinit": 1176, "haskei": 1176, "sameindividu": 1176, "differentindividu": 1176, "classassert": 1176, "negativeobjectpropertyassert": 1176, "datapropertyassert": 1176, "negativedatapropertyassert": 1176, "subannotationpropertyof": 1176, "annotationpropertydomain": 1176, "annotationpropertyrang": 1176, "super": 1176, "propag": 1177, "dct": 1177, "tbd": 1177, "curie_map": 1177, "namebecomessynonym": 1177, "newsynonym": 1177, "relation_graph_interfac": 1178, "honor": 1179, "sqldatabaseimplement": [1179, 1184], "fulfil": 1179, "inexact": 1179, "fma": 1179, "9712": 1179, "0007723": 1179, "interphalang": 1179, "joint": 1179, "0007729": 1179, "_if_miss": [1179, 1183, 1196], "alter": [1179, 1196], "semsim_interfac": 1180, "include_owl_th": 1180, "asymmetr": 1180, "subject_ancestor": 1180, "object_ancestor": 1180, "use_associ": 1180, "term_to_entities_map": 1180, "freq": 1180, "subsetter_interfac": 1181, "roll": 1181, "seed_curi": 1181, "subsetstrategi": 1181, "basi": 1181, "summary_statistics_interfac": 1182, "branch_nam": 1182, "branch_root": 1182, "metadata_properti": 1182, "summary_statistics_datamodel": 1182, "text_annotator_interfac": 1183, "occurr": 1183, "cr": 1183, "mitochondrion": 1183, "hippocamp": 1183, "obviat": 1183, "scispaci": 1183, "oger": 1183, "ner": 1183, "35": 1183, "42": 1183, "18": 1183, "26": 1183, "textiowrapp": 1183, "result_column": 1183, "matched_id": 1183, "result_label_column": 1183, "matched_label": 1183, "match_multipl": 1183, "include_unmatch": 1183, "validator_interfac": 1184, "overal": 1184, "ontologymetadata": 1184, "quickli": 1184, "checker": 1184, "exclude_noth": 1184, "tautolog": 1184, "bewild": 1185, "constantli": 1185, "trip": 1185, "ld": 1185, "huh": 1185, "moment": 1185, "bioportalimplement": 1185, "colon": 1185, "guess": 1185, "get_implementation_from_shorthand": 1185, "get_implementation_class_from_schem": 1185, "activest": 1186, "appdir": 1186, "standalon": 1194, "fundament": 1195, "wild": 1195, "solv": 1195, "whilst": 1195, "retain": 1195, "intuit": 1195, "myontologi": 1195, "get_implentation_from_shorthand": 1195, "iao_0100001": 1195, "preliminari": 1196, "search1": 1196, "search2": 1196, "search3": 1196, "subtract": 1196, "create_search_configur": 1196}, "objects": {"oaklib.converters.data_model_converter": [[1144, 0, 1, "", "DataModelConverter"]], "oaklib.converters.data_model_converter.DataModelConverter": [[1144, 1, 1, "", "convert"], [1144, 2, 1, "", "curie_converter"], [1144, 1, 1, "", "dump"], [1144, 2, 1, "", "enforce_canonical_ordering"], [1144, 2, 1, "", "labeler"]], "oaklib.converters.obo_graph_to_cx_converter": [[1146, 0, 1, "", "OboGraphToCXConverter"]], "oaklib.converters.obo_graph_to_cx_converter.OboGraphToCXConverter": [[1146, 1, 1, "", "convert"], [1146, 1, 1, "", "dump"]], "oaklib.converters.obo_graph_to_fhir_converter": [[1147, 0, 1, "", "OboGraphToFHIRConverter"]], "oaklib.converters.obo_graph_to_fhir_converter.OboGraphToFHIRConverter": [[1147, 1, 1, "", "code"], [1147, 1, 1, "", "convert"], [1147, 1, 1, "", "dump"]], "oaklib.converters.obo_graph_to_obo_format_converter": [[1148, 0, 1, "", "OboGraphToOboFormatConverter"]], "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter": [[1148, 1, 1, "", "as_bytes_io"], [1148, 1, 1, "", "convert"], [1148, 1, 1, "", "dump"], [1148, 1, 1, "", "dumps"]], "oaklib.datamodels": [[1196, 3, 0, "-", "search"]], "oaklib.datamodels.search": [[1196, 0, 1, "", "SearchConfiguration"], [1196, 4, 1, "", "create_search_configuration"]], "oaklib.datamodels.text_annotator": [[1183, 0, 1, "", "TextAnnotation"]], "oaklib.implementations.aggregator.aggregator_implementation": [[1150, 0, 1, "", "AggregatorImplementation"]], "oaklib.implementations.funowl.funowl_implementation": [[1152, 0, 1, "", "FunOwlImplementation"]], "oaklib.implementations.gilda": [[1153, 0, 1, "", "GildaImplementation"]], "oaklib.implementations.obograph.obograph_implementation": [[1156, 0, 1, "", "OboGraphImplementation"]], "oaklib.implementations.ols.ols_implementation": [[1157, 0, 1, "", "OlsImplementation"]], "oaklib.implementations.ontobee.ontobee_implementation": [[1158, 0, 1, "", "OntobeeImplementation"]], "oaklib.implementations.owlery.owlery_implementation": [[1159, 0, 1, "", "OwleryImplementation"]], "oaklib.implementations.pantherdb.pantherdb_implementation": [[1160, 0, 1, "", "PantherDBImplementation"]], "oaklib.implementations.pronto.pronto_implementation": [[1161, 0, 1, "", "ProntoImplementation"]], "oaklib.implementations.simpleobo.simple_obo_implementation": [[1163, 0, 1, "", "SimpleOboImplementation"]], "oaklib.implementations.sparql.sparql_implementation": [[1164, 0, 1, "", "SparqlImplementation"]], "oaklib.implementations.sqldb.sql_implementation": [[1165, 0, 1, "", "SqlImplementation"]], "oaklib.implementations.sqldb.sql_implementation.SqlImplementation": [[1165, 1, 1, "", "create"]], "oaklib.implementations.ubergraph.ubergraph_implementation": [[1166, 0, 1, "", "RelationGraphEnum"], [1166, 0, 1, "", "UbergraphImplementation"]], "oaklib.interfaces.association_provider_interface": [[1168, 0, 1, "", "AssociationProviderInterface"]], "oaklib.interfaces.association_provider_interface.AssociationProviderInterface": [[1168, 1, 1, "", "add_associations"], [1168, 1, 1, "", "association_counts"], [1168, 1, 1, "", "association_pairwise_coassociations"], [1168, 1, 1, "", "association_subject_counts"], [1168, 1, 1, "", "associations"], [1168, 1, 1, "", "associations_subject_search"], [1168, 1, 1, "", "associations_subjects"], [1168, 1, 1, "", "map_associations"], [1168, 1, 1, "", "normalize_association"], [1168, 1, 1, "", "normalize_associations"]], "oaklib.interfaces.basic_ontology_interface": [[1169, 0, 1, "", "BasicOntologyInterface"]], "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface": [[1169, 1, 1, "", "add_missing_property_values"], [1169, 1, 1, "", "alias_map_by_curie"], [1169, 1, 1, "", "aliases_by_curie"], [1169, 1, 1, "", "all_entity_curies"], [1169, 1, 1, "", "all_obsolete_curies"], [1169, 1, 1, "", "all_ontology_curies"], [1169, 1, 1, "", "all_relationships"], [1169, 1, 1, "", "all_subset_curies"], [1169, 2, 1, "", "auto_relax_axioms"], [1169, 2, 1, "", "autosave"], [1169, 2, 1, "", "cache_lookups"], [1169, 1, 1, "", "clone"], [1169, 1, 1, "", "comments"], [1169, 5, 1, "", "converter"], [1169, 1, 1, "", "create_entity"], [1169, 1, 1, "", "curie_to_uri"], [1169, 1, 1, "", "curies_by_label"], [1169, 1, 1, "", "curies_by_subset"], [1169, 1, 1, "", "dangling"], [1169, 5, 1, "", "default_language"], [1169, 1, 1, "", "defined_by"], [1169, 1, 1, "", "defined_bys"], [1169, 1, 1, "", "definition"], [1169, 1, 1, "", "definitions"], [1169, 1, 1, "", "delete_entity"], [1169, 5, 1, "", "edge_index"], [1169, 5, 1, "", "entailed_edge_index"], [1169, 1, 1, "", "entities"], [1169, 1, 1, "", "entities_metadata_statements"], [1169, 1, 1, "", "entity_alias_map"], [1169, 1, 1, "", "entity_aliases"], [1169, 1, 1, "", "entity_metadata_map"], [1169, 2, 1, "", "exclude_owl_top_and_bottom"], [1169, 1, 1, "", "get_curies_by_label"], [1169, 1, 1, "", "get_definition_by_curie"], [1169, 1, 1, "", "get_label_by_curie"], [1169, 1, 1, "", "get_labels_for_curies"], [1169, 1, 1, "", "get_prefix_map"], [1169, 1, 1, "", "hierarchical_parents"], [1169, 1, 1, "", "incoming_relationship_map"], [1169, 1, 1, "", "incoming_relationships"], [1169, 1, 1, "", "label"], [1169, 1, 1, "", "labels"], [1169, 1, 1, "", "languages"], [1169, 1, 1, "", "leafs"], [1169, 5, 1, "", "multilingual"], [1169, 1, 1, "", "multilingual_labels"], [1169, 1, 1, "", "obsoletes"], [1169, 1, 1, "", "obsoletes_migration_relationships"], [1169, 1, 1, "", "ontologies"], [1169, 1, 1, "", "ontology_curies"], [1169, 1, 1, "", "ontology_metadata_map"], [1169, 2, 1, "", "ontology_metamodel_mapper"], [1169, 1, 1, "", "ontology_versions"], [1169, 1, 1, "", "outgoing_relationship_map"], [1169, 1, 1, "", "outgoing_relationships"], [1169, 1, 1, "", "owl_type"], [1169, 1, 1, "", "owl_types"], [1169, 1, 1, "", "precompute_lookups"], [1169, 1, 1, "", "prefix_map"], [1169, 1, 1, "", "query"], [1169, 1, 1, "", "relationships"], [1169, 1, 1, "", "relationships_metadata"], [1169, 1, 1, "", "roots"], [1169, 1, 1, "", "save"], [1169, 1, 1, "", "set_label"], [1169, 1, 1, "", "set_metamodel_mappings"], [1169, 1, 1, "", "simple_mappings"], [1169, 1, 1, "", "simple_mappings_by_curie"], [1169, 1, 1, "", "singletons"], [1169, 2, 1, "", "strict"], [1169, 1, 1, "", "subset_curies"], [1169, 1, 1, "", "subset_members"], [1169, 1, 1, "", "subsets"], [1169, 1, 1, "", "terms_categories"], [1169, 1, 1, "", "terms_subsets"], [1169, 1, 1, "", "uri_to_curie"]], "oaklib.interfaces.class_enrichment_calculation_interface": [[1170, 0, 1, "", "ClassEnrichmentCalculationInterface"]], "oaklib.interfaces.class_enrichment_calculation_interface.ClassEnrichmentCalculationInterface": [[1170, 1, 1, "", "create_self_associations"], [1170, 1, 1, "", "enriched_classes"]], "oaklib.interfaces.differ_interface": [[1171, 0, 1, "", "DifferInterface"]], "oaklib.interfaces.differ_interface.DifferInterface": [[1171, 2, 1, "", "autosave"], [1171, 1, 1, "", "compare_ontology_term_lists"], [1171, 1, 1, "", "diff"], [1171, 1, 1, "", "diff_summary"], [1171, 2, 1, "", "exclude_owl_top_and_bottom"], [1171, 1, 1, "", "grouped_diff"]], "oaklib.interfaces.dumper_interface": [[1172, 0, 1, "", "DumperInterface"]], "oaklib.interfaces.dumper_interface.DumperInterface": [[1172, 2, 1, "", "autosave"], [1172, 1, 1, "", "dump"], [1172, 2, 1, "", "exclude_owl_top_and_bottom"]], "oaklib.interfaces.mapping_provider_interface": [[1174, 0, 1, "", "MappingProviderInterface"]], "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface": [[1174, 1, 1, "", "all_sssom_mappings"], [1174, 2, 1, "", "autosave"], [1174, 1, 1, "", "create_normalization_map"], [1174, 2, 1, "", "exclude_owl_top_and_bottom"], [1174, 1, 1, "", "get_sssom_mappings_by_curie"], [1174, 1, 1, "", "get_transitive_mappings_by_curie"], [1174, 1, 1, "", "normalize"], [1174, 1, 1, "", "normalize_prefix"], [1174, 1, 1, "", "sssom_mappings"], [1174, 1, 1, "", "sssom_mappings_by_source"]], "oaklib.interfaces.obograph_interface": [[1175, 0, 1, "", "OboGraphInterface"], [1175, 0, 1, "", "TraversalConfiguration"]], "oaklib.interfaces.obograph_interface.OboGraphInterface": [[1175, 1, 1, "", "add_metadata"], [1175, 1, 1, "", "ancestor_graph"], [1175, 1, 1, "", "ancestors"], [1175, 1, 1, "", "as_obograph"], [1175, 1, 1, "", "descendant_count"], [1175, 1, 1, "", "descendant_graph"], [1175, 1, 1, "", "descendants"], [1175, 1, 1, "", "disable_transitive_query_cache"], [1175, 1, 1, "", "disjoint_class_expressions_axioms"], [1175, 1, 1, "", "edges"], [1175, 1, 1, "", "enable_transitive_query_cache"], [1175, 1, 1, "", "extract_graph"], [1175, 1, 1, "", "load_graph"], [1175, 1, 1, "", "logical_definitions"], [1175, 1, 1, "", "node"], [1175, 1, 1, "", "nodes"], [1175, 1, 1, "", "paths"], [1175, 1, 1, "", "relationships_to_graph"], [1175, 1, 1, "", "subgraph_from_traversal"], [1175, 1, 1, "", "synonym_map_for_curies"], [1175, 1, 1, "", "walk_up_relationship_graph"]], "oaklib.interfaces.owl_interface": [[1176, 0, 1, "", "OwlInterface"]], "oaklib.interfaces.owl_interface.OwlInterface": [[1176, 1, 1, "", "annotation_assertion_axioms"], [1176, 1, 1, "", "axiom_is_about"], [1176, 1, 1, "", "axiom_references"], [1176, 1, 1, "", "disjoint_pairs"], [1176, 1, 1, "", "equivalence_axioms"], [1176, 1, 1, "", "is_disjoint"], [1176, 1, 1, "", "is_satisfiable"], [1176, 1, 1, "", "property_characteristics"], [1176, 1, 1, "", "reasoner_configurations"], [1176, 1, 1, "", "simple_subproperty_of_chains"], [1176, 1, 1, "", "subclass_axioms"], [1176, 1, 1, "", "transitive_object_properties"]], "oaklib.interfaces.patcher_interface": [[1177, 0, 1, "", "PatcherInterface"]], "oaklib.interfaces.patcher_interface.PatcherInterface": [[1177, 1, 1, "", "apply_patch"], [1177, 2, 1, "", "auto_add_contributor_using"], [1177, 1, 1, "", "expand_change"], [1177, 1, 1, "", "expand_changes"], [1177, 2, 1, "", "ignore_invalid_changes"], [1177, 1, 1, "", "migrate_curies"], [1177, 1, 1, "", "reverse_changes"], [1177, 1, 1, "", "save"], [1177, 1, 1, "", "undo"]], "oaklib.interfaces.relation_graph_interface": [[1178, 0, 1, "", "RelationGraphInterface"]], "oaklib.interfaces.relation_graph_interface.RelationGraphInterface": [[1178, 2, 1, "", "autosave"], [1178, 1, 1, "", "entailed_incoming_relationships"], [1178, 1, 1, "", "entailed_outgoing_relationships"], [1178, 1, 1, "", "entailed_relationships_between"], [1178, 2, 1, "", "exclude_owl_top_and_bottom"]], "oaklib.interfaces.search_interface": [[1179, 0, 1, "", "SearchConfiguration"], [1179, 0, 1, "", "SearchInterface"]], "oaklib.interfaces.search_interface.SearchInterface": [[1179, 2, 1, "", "autosave"], [1179, 1, 1, "", "basic_search"], [1179, 2, 1, "", "exclude_owl_top_and_bottom"], [1179, 1, 1, "", "multiterm_search"]], "oaklib.interfaces.semsim_interface": [[1180, 0, 1, "", "SemanticSimilarityInterface"]], "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface": [[1180, 1, 1, "", "all_by_all_pairwise_similarity"], [1180, 2, 1, "", "cached_information_content_map"], [1180, 1, 1, "", "common_ancestors"], [1180, 1, 1, "", "get_information_content"], [1180, 1, 1, "", "information_content_scores"], [1180, 1, 1, "", "most_recent_common_ancestors"], [1180, 1, 1, "", "multiset_most_recent_common_ancestors"], [1180, 1, 1, "", "pairwise_similarity"], [1180, 1, 1, "", "setwise_most_recent_common_ancestors"]], "oaklib.interfaces.subsetter_interface": [[1181, 0, 1, "", "SubsetterInterface"]], "oaklib.interfaces.subsetter_interface.SubsetterInterface": [[1181, 2, 1, "", "autosave"], [1181, 2, 1, "", "exclude_owl_top_and_bottom"], [1181, 1, 1, "", "extract_subset_ontology"], [1181, 1, 1, "", "gap_fill_relationships"]], "oaklib.interfaces.summary_statistics_interface": [[1182, 0, 1, "", "SummaryStatisticsInterface"]], "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface": [[1182, 1, 1, "", "branch_summary_statistics"], [1182, 1, 1, "", "global_summary_statistics"], [1182, 1, 1, "", "metadata_property_summary_statistics"], [1182, 1, 1, "", "summary_statistic_description"]], "oaklib.interfaces.text_annotator_interface": [[1183, 0, 1, "", "TextAnnotatorInterface"]], "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface": [[1183, 1, 1, "", "annotate_file"], [1183, 1, 1, "", "annotate_tabular_file"], [1183, 1, 1, "", "annotate_text"], [1183, 2, 1, "", "cache_directory"], [1183, 2, 1, "", "lexical_index"], [1183, 2, 1, "", "rule_collection"]], "oaklib.interfaces.validator_interface": [[1184, 0, 1, "", "ValidatorInterface"]], "oaklib.interfaces.validator_interface.ValidatorInterface": [[1184, 2, 1, "", "autosave"], [1184, 2, 1, "", "exclude_owl_top_and_bottom"], [1184, 1, 1, "", "is_coherent"], [1184, 1, 1, "", "repair"], [1184, 1, 1, "", "term_curies_without_definitions"], [1184, 1, 1, "", "unsatisfiable_classes"], [1184, 1, 1, "", "validate"], [1184, 1, 1, "", "validate_mappings"]], "oaklib": [[1185, 3, 0, "-", "selector"]], "oaklib.selector": [[1185, 4, 1, "", "add_associations"], [1185, 4, 1, "", "get_adapter"], [1185, 4, 1, "", "get_implementation_class_from_scheme"], [1185, 4, 1, "", "get_implementation_from_shorthand"], [1185, 4, 1, "", "get_resource_from_shorthand"]], "oaklib.utilities": [[1186, 3, 0, "-", "apikey_manager"], [1190, 3, 0, "-", "obograph_utils"], [1192, 3, 0, "-", "table_filler"], [1193, 3, 0, "-", "taxon"]], "oaklib.utilities.graph": [[1187, 3, 0, "-", "networkx_bridge"], [1188, 3, 0, "-", "relationship_walker"]], "oaklib.utilities.lexical": [[1189, 3, 0, "-", "lexical_indexer"]], "oaklib.utilities.subsets": [[1191, 3, 0, "-", "slimmer_utils"]], "semsql.sqla.semsql": [[1165, 0, 1, "", "Edge"], [1165, 0, 1, "", "EntailedEdge"], [1165, 0, 1, "", "Statements"]], "runoak-aliases": [[0, 6, 1, "cmdoption-runoak-aliases-obo-model", "--no-obo-model"], [0, 6, 1, "cmdoption-runoak-aliases-obo-model", "--obo-model"], [0, 6, 1, "cmdoption-runoak-aliases-o", "--output"], [0, 6, 1, "cmdoption-runoak-aliases-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-aliases-O", "-O"], [0, 6, 1, "cmdoption-runoak-aliases-o", "-o"], [0, 6, 1, "cmdoption-runoak-aliases-arg-TERMS", "TERMS"]], "runoak-ancestors": [[0, 6, 1, "cmdoption-runoak-ancestors-M", "--graph-traversal-method"], [0, 6, 1, "cmdoption-runoak-ancestors-statistics", "--no-statistics"], [0, 6, 1, "cmdoption-runoak-ancestors-o", "--output"], [0, 6, 1, "cmdoption-runoak-ancestors-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-ancestors-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-ancestors-statistics", "--statistics"], [0, 6, 1, "cmdoption-runoak-ancestors-M", "-M"], [0, 6, 1, "cmdoption-runoak-ancestors-O", "-O"], [0, 6, 1, "cmdoption-runoak-ancestors-o", "-o"], [0, 6, 1, "cmdoption-runoak-ancestors-p", "-p"], [0, 6, 1, "cmdoption-runoak-ancestors-arg-TERMS", "TERMS"]], "runoak-annotate": [[0, 6, 1, "cmdoption-runoak-annotate-C", "--configuration-file"], [0, 6, 1, "cmdoption-runoak-annotate-x", "--exclude-tokens"], [0, 6, 1, "cmdoption-runoak-annotate-include-aliases", "--include-aliases"], [0, 6, 1, "cmdoption-runoak-annotate-L", "--lexical-index-file"], [0, 6, 1, "cmdoption-runoak-annotate-A", "--match-column"], [0, 6, 1, "cmdoption-runoak-annotate-W", "--matches-whole-text"], [0, 6, 1, "cmdoption-runoak-annotate-m", "--model"], [0, 6, 1, "cmdoption-runoak-annotate-W", "--no-W"], [0, 6, 1, "cmdoption-runoak-annotate-include-aliases", "--no-include-aliases"], [0, 6, 1, "cmdoption-runoak-annotate-W", "--no-matches-whole-text"], [0, 6, 1, "cmdoption-runoak-annotate-o", "--output"], [0, 6, 1, "cmdoption-runoak-annotate-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-annotate-R", "--rules-file"], [0, 6, 1, "cmdoption-runoak-annotate-text-file", "--text-file"], [0, 6, 1, "cmdoption-runoak-annotate-A", "-A"], [0, 6, 1, "cmdoption-runoak-annotate-C", "-C"], [0, 6, 1, "cmdoption-runoak-annotate-L", "-L"], [0, 6, 1, "cmdoption-runoak-annotate-O", "-O"], [0, 6, 1, "cmdoption-runoak-annotate-R", "-R"], [0, 6, 1, "cmdoption-runoak-annotate-W", "-W"], [0, 6, 1, "cmdoption-runoak-annotate-m", "-m"], [0, 6, 1, "cmdoption-runoak-annotate-o", "-o"], [0, 6, 1, "cmdoption-runoak-annotate-x", "-x"], [0, 6, 1, "cmdoption-runoak-annotate-arg-WORDS", "WORDS"]], "runoak-apply-obsolete": [[0, 6, 1, "cmdoption-runoak-apply-obsolete-expand", "--expand"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-ignore-invalid-changes", "--ignore-invalid-changes"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-expand", "--no-expand"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-ignore-invalid-changes", "--no-ignore-invalid-changes"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-o", "--output"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-O", "-O"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-o", "-o"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-arg-TERMS", "TERMS"]], "runoak-apply-taxon-constraints": [[0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-E", "--evolution-file"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-M", "--graph-traversal-method"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-o", "--output"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-E", "-E"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-M", "-M"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-o", "-o"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-p", "-p"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-arg-CONSTRAINTS", "CONSTRAINTS"]], "runoak-apply": [[0, 6, 1, "cmdoption-runoak-apply-changes-format", "--changes-format"], [0, 6, 1, "cmdoption-runoak-apply-changes-input", "--changes-input"], [0, 6, 1, "cmdoption-runoak-apply-changes-output", "--changes-output"], [0, 6, 1, "cmdoption-runoak-apply-contributor", "--contributor"], [0, 6, 1, "cmdoption-runoak-apply-dry-run", "--dry-run"], [0, 6, 1, "cmdoption-runoak-apply-expand", "--expand"], [0, 6, 1, "cmdoption-runoak-apply-ignore-invalid-changes", "--ignore-invalid-changes"], [0, 6, 1, "cmdoption-runoak-apply-dry-run", "--no-dry-run"], [0, 6, 1, "cmdoption-runoak-apply-expand", "--no-expand"], [0, 6, 1, "cmdoption-runoak-apply-ignore-invalid-changes", "--no-ignore-invalid-changes"], [0, 6, 1, "cmdoption-runoak-apply-overwrite", "--no-overwrite"], [0, 6, 1, "cmdoption-runoak-apply-o", "--output"], [0, 6, 1, "cmdoption-runoak-apply-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-apply-overwrite", "--overwrite"], [0, 6, 1, "cmdoption-runoak-apply-O", "-O"], [0, 6, 1, "cmdoption-runoak-apply-o", "-o"], [0, 6, 1, "cmdoption-runoak-apply-arg-COMMANDS", "COMMANDS"]], "runoak-associations-counts": [[0, 6, 1, "cmdoption-runoak-associations-counts-add-closure-fields", "--add-closure-fields"], [0, 6, 1, "cmdoption-runoak-associations-counts-association-predicates", "--association-predicates"], [0, 6, 1, "cmdoption-runoak-associations-counts-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-associations-counts-F", "--filter"], [0, 6, 1, "cmdoption-runoak-associations-counts-group-by", "--group-by"], [0, 6, 1, "cmdoption-runoak-associations-counts-L", "--limit"], [0, 6, 1, "cmdoption-runoak-associations-counts-min-facet-count", "--min-facet-count"], [0, 6, 1, "cmdoption-runoak-associations-counts-add-closure-fields", "--no-add-closure-fields"], [0, 6, 1, "cmdoption-runoak-associations-counts-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-associations-counts-o", "--output"], [0, 6, 1, "cmdoption-runoak-associations-counts-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-associations-counts-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-associations-counts-Q", "--terms-role"], [0, 6, 1, "cmdoption-runoak-associations-counts-F", "-F"], [0, 6, 1, "cmdoption-runoak-associations-counts-L", "-L"], [0, 6, 1, "cmdoption-runoak-associations-counts-O", "-O"], [0, 6, 1, "cmdoption-runoak-associations-counts-Q", "-Q"], [0, 6, 1, "cmdoption-runoak-associations-counts-o", "-o"], [0, 6, 1, "cmdoption-runoak-associations-counts-p", "-p"], [0, 6, 1, "cmdoption-runoak-associations-counts-arg-TERMS", "TERMS"]], "runoak-associations-matrix": [[0, 6, 1, "cmdoption-runoak-associations-matrix-association-predicates", "--association-predicates"], [0, 6, 1, "cmdoption-runoak-associations-matrix-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-associations-matrix-include-entities", "--include-entities"], [0, 6, 1, "cmdoption-runoak-associations-matrix-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-associations-matrix-include-entities", "--no-include-entities"], [0, 6, 1, "cmdoption-runoak-associations-matrix-o", "--output"], [0, 6, 1, "cmdoption-runoak-associations-matrix-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-associations-matrix-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-associations-matrix-Q", "--terms-role"], [0, 6, 1, "cmdoption-runoak-associations-matrix-O", "-O"], [0, 6, 1, "cmdoption-runoak-associations-matrix-Q", "-Q"], [0, 6, 1, "cmdoption-runoak-associations-matrix-o", "-o"], [0, 6, 1, "cmdoption-runoak-associations-matrix-p", "-p"], [0, 6, 1, "cmdoption-runoak-associations-matrix-arg-TERMS", "TERMS"]], "runoak-associations": [[0, 6, 1, "cmdoption-runoak-associations-add-closure-fields", "--add-closure-fields"], [0, 6, 1, "cmdoption-runoak-associations-association-predicates", "--association-predicates"], [0, 6, 1, "cmdoption-runoak-associations-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-associations-if-absent", "--if-absent"], [0, 6, 1, "cmdoption-runoak-associations-add-closure-fields", "--no-add-closure-fields"], [0, 6, 1, "cmdoption-runoak-associations-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-associations-o", "--output"], [0, 6, 1, "cmdoption-runoak-associations-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-associations-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-associations-S", "--set-value"], [0, 6, 1, "cmdoption-runoak-associations-Q", "--terms-role"], [0, 6, 1, "cmdoption-runoak-associations-O", "-O"], [0, 6, 1, "cmdoption-runoak-associations-Q", "-Q"], [0, 6, 1, "cmdoption-runoak-associations-S", "-S"], [0, 6, 1, "cmdoption-runoak-associations-o", "-o"], [0, 6, 1, "cmdoption-runoak-associations-p", "-p"], [0, 6, 1, "cmdoption-runoak-associations-arg-TERMS", "TERMS"]], "runoak-axioms": [[0, 6, 1, "cmdoption-runoak-axioms-about", "--about"], [0, 6, 1, "cmdoption-runoak-axioms-axiom-type", "--axiom-type"], [0, 6, 1, "cmdoption-runoak-axioms-o", "--output"], [0, 6, 1, "cmdoption-runoak-axioms-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-axioms-references", "--references"], [0, 6, 1, "cmdoption-runoak-axioms-O", "-O"], [0, 6, 1, "cmdoption-runoak-axioms-o", "-o"], [0, 6, 1, "cmdoption-runoak-axioms-arg-TERMS", "TERMS"]], "runoak-cache-clear": [[0, 6, 1, "cmdoption-runoak-cache-clear-days-old", "--days-old"]], "runoak-definitions": [[0, 6, 1, "cmdoption-runoak-definitions-additional-metadata", "--additional-metadata"], [0, 6, 1, "cmdoption-runoak-definitions-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-definitions-D", "--display"], [0, 6, 1, "cmdoption-runoak-definitions-if-absent", "--if-absent"], [0, 6, 1, "cmdoption-runoak-definitions-additional-metadata", "--no-additional-metadata"], [0, 6, 1, "cmdoption-runoak-definitions-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-definitions-o", "--output"], [0, 6, 1, "cmdoption-runoak-definitions-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-definitions-S", "--set-value"], [0, 6, 1, "cmdoption-runoak-definitions-D", "-D"], [0, 6, 1, "cmdoption-runoak-definitions-O", "-O"], [0, 6, 1, "cmdoption-runoak-definitions-S", "-S"], [0, 6, 1, "cmdoption-runoak-definitions-o", "-o"], [0, 6, 1, "cmdoption-runoak-definitions-arg-TERMS", "TERMS"]], "runoak-descendants": [[0, 6, 1, "cmdoption-runoak-descendants-D", "--display"], [0, 6, 1, "cmdoption-runoak-descendants-M", "--graph-traversal-method"], [0, 6, 1, "cmdoption-runoak-descendants-o", "--output"], [0, 6, 1, "cmdoption-runoak-descendants-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-descendants-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-descendants-D", "-D"], [0, 6, 1, "cmdoption-runoak-descendants-M", "-M"], [0, 6, 1, "cmdoption-runoak-descendants-O", "-O"], [0, 6, 1, "cmdoption-runoak-descendants-o", "-o"], [0, 6, 1, "cmdoption-runoak-descendants-p", "-p"], [0, 6, 1, "cmdoption-runoak-descendants-arg-TERMS", "TERMS"]], "runoak-diff-associations": [[0, 6, 1, "cmdoption-runoak-diff-associations-g", "--associations"], [0, 6, 1, "cmdoption-runoak-diff-associations-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-diff-associations-group-by", "--group-by"], [0, 6, 1, "cmdoption-runoak-diff-associations-new-date", "--new-date"], [0, 6, 1, "cmdoption-runoak-diff-associations-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-diff-associations-old-date", "--old-date"], [0, 6, 1, "cmdoption-runoak-diff-associations-X", "--other-associations"], [0, 6, 1, "cmdoption-runoak-diff-associations-o", "--output"], [0, 6, 1, "cmdoption-runoak-diff-associations-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-diff-associations-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-diff-associations-O", "-O"], [0, 6, 1, "cmdoption-runoak-diff-associations-X", "-X"], [0, 6, 1, "cmdoption-runoak-diff-associations-g", "-g"], [0, 6, 1, "cmdoption-runoak-diff-associations-o", "-o"], [0, 6, 1, "cmdoption-runoak-diff-associations-p", "-p"]], "runoak-diff-terms": [[0, 6, 1, "cmdoption-runoak-diff-terms-other-ontology", "--other-ontology"], [0, 6, 1, "cmdoption-runoak-diff-terms-o", "--output"], [0, 6, 1, "cmdoption-runoak-diff-terms-o", "-o"], [0, 6, 1, "cmdoption-runoak-diff-terms-arg-TERMS", "TERMS"]], "runoak-diff-via-mappings": [[0, 6, 1, "cmdoption-runoak-diff-via-mappings-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-bidirectional", "--bidirectional"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-filter-category-identical", "--filter-category-identical"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-include-identity-mappings", "--include-identity-mappings"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-intra", "--intra"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-mapping-input", "--mapping-input"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-bidirectional", "--no-bidirectional"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-filter-category-identical", "--no-filter-category-identical"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-include-identity-mappings", "--no-include-identity-mappings"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-intra", "--no-intra"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-X", "--other-input"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-other-input-type", "--other-input-type"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-o", "--output"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-S", "--source"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-O", "-O"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-S", "-S"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-X", "-X"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-o", "-o"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-p", "-p"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-arg-TERMS", "TERMS"]], "runoak-diff": [[0, 6, 1, "cmdoption-runoak-diff-change-type", "--change-type"], [0, 6, 1, "cmdoption-runoak-diff-group-by-defined-by", "--group-by-defined-by"], [0, 6, 1, "cmdoption-runoak-diff-group-by-obo-namespace", "--group-by-obo-namespace"], [0, 6, 1, "cmdoption-runoak-diff-group-by-prefix", "--group-by-prefix"], [0, 6, 1, "cmdoption-runoak-diff-group-by-property", "--group-by-property"], [0, 6, 1, "cmdoption-runoak-diff-group-by-defined-by", "--no-group-by-defined-by"], [0, 6, 1, "cmdoption-runoak-diff-group-by-obo-namespace", "--no-group-by-obo-namespace"], [0, 6, 1, "cmdoption-runoak-diff-group-by-prefix", "--no-group-by-prefix"], [0, 6, 1, "cmdoption-runoak-diff-simple", "--no-simple"], [0, 6, 1, "cmdoption-runoak-diff-statistics", "--no-statistics"], [0, 6, 1, "cmdoption-runoak-diff-X", "--other-ontology"], [0, 6, 1, "cmdoption-runoak-diff-o", "--output"], [0, 6, 1, "cmdoption-runoak-diff-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-diff-simple", "--simple"], [0, 6, 1, "cmdoption-runoak-diff-statistics", "--statistics"], [0, 6, 1, "cmdoption-runoak-diff-O", "-O"], [0, 6, 1, "cmdoption-runoak-diff-X", "-X"], [0, 6, 1, "cmdoption-runoak-diff-o", "-o"]], "runoak-disjoints": [[0, 6, 1, "cmdoption-runoak-disjoints-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-disjoints-named-classes-only", "--named-classes-only"], [0, 6, 1, "cmdoption-runoak-disjoints-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-disjoints-named-classes-only", "--no-named-classes-only"], [0, 6, 1, "cmdoption-runoak-disjoints-o", "--output"], [0, 6, 1, "cmdoption-runoak-disjoints-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-disjoints-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-disjoints-O", "-O"], [0, 6, 1, "cmdoption-runoak-disjoints-o", "-o"], [0, 6, 1, "cmdoption-runoak-disjoints-p", "-p"], [0, 6, 1, "cmdoption-runoak-disjoints-arg-TERMS", "TERMS"]], "runoak-dump": [[0, 6, 1, "cmdoption-runoak-dump-c", "--config-file"], [0, 6, 1, "cmdoption-runoak-dump-enforce-canonical-ordering", "--enforce-canonical-ordering"], [0, 6, 1, "cmdoption-runoak-dump-enforce-canonical-ordering", "--no-enforce-canonical-ordering"], [0, 6, 1, "cmdoption-runoak-dump-o", "--output"], [0, 6, 1, "cmdoption-runoak-dump-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-dump-O", "-O"], [0, 6, 1, "cmdoption-runoak-dump-c", "-c"], [0, 6, 1, "cmdoption-runoak-dump-o", "-o"], [0, 6, 1, "cmdoption-runoak-dump-arg-TERMS", "TERMS"]], "runoak-enrichment": [[0, 6, 1, "cmdoption-runoak-enrichment-allow-labels", "--allow-labels"], [0, 6, 1, "cmdoption-runoak-enrichment-association-predicates", "--association-predicates"], [0, 6, 1, "cmdoption-runoak-enrichment-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-enrichment-B", "--background-file"], [0, 6, 1, "cmdoption-runoak-enrichment-cutoff", "--cutoff"], [0, 6, 1, "cmdoption-runoak-enrichment-filter-redundant", "--filter-redundant"], [0, 6, 1, "cmdoption-runoak-enrichment-allow-labels", "--no-allow-labels"], [0, 6, 1, "cmdoption-runoak-enrichment-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-enrichment-filter-redundant", "--no-filter-redundant"], [0, 6, 1, "cmdoption-runoak-enrichment-ontology-only", "--no-ontology-only"], [0, 6, 1, "cmdoption-runoak-enrichment-ontology-only", "--ontology-only"], [0, 6, 1, "cmdoption-runoak-enrichment-o", "--output"], [0, 6, 1, "cmdoption-runoak-enrichment-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-enrichment-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-enrichment-U", "--sample-file"], [0, 6, 1, "cmdoption-runoak-enrichment-B", "-B"], [0, 6, 1, "cmdoption-runoak-enrichment-O", "-O"], [0, 6, 1, "cmdoption-runoak-enrichment-U", "-U"], [0, 6, 1, "cmdoption-runoak-enrichment-o", "-o"], [0, 6, 1, "cmdoption-runoak-enrichment-p", "-p"], [0, 6, 1, "cmdoption-runoak-enrichment-arg-TERMS", "TERMS"]], "runoak-expand-subsets": [[0, 6, 1, "cmdoption-runoak-expand-subsets-o", "--output"], [0, 6, 1, "cmdoption-runoak-expand-subsets-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-expand-subsets-o", "-o"], [0, 6, 1, "cmdoption-runoak-expand-subsets-p", "-p"], [0, 6, 1, "cmdoption-runoak-expand-subsets-arg-SUBSETS", "SUBSETS"]], "runoak-extract": [[0, 6, 1, "cmdoption-runoak-extract-dangling", "--dangling"], [0, 6, 1, "cmdoption-runoak-extract-include-metadata", "--include-metadata"], [0, 6, 1, "cmdoption-runoak-extract-dangling", "--no-dangling"], [0, 6, 1, "cmdoption-runoak-extract-include-metadata", "--no-include-metadata"], [0, 6, 1, "cmdoption-runoak-extract-o", "--output"], [0, 6, 1, "cmdoption-runoak-extract-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-extract-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-extract-O", "-O"], [0, 6, 1, "cmdoption-runoak-extract-o", "-o"], [0, 6, 1, "cmdoption-runoak-extract-p", "-p"], [0, 6, 1, "cmdoption-runoak-extract-arg-TERMS", "TERMS"]], "runoak-fill-table": [[0, 6, 1, "cmdoption-runoak-fill-table-allow-missing", "--allow-missing"], [0, 6, 1, "cmdoption-runoak-fill-table-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-fill-table-comment", "--comment"], [0, 6, 1, "cmdoption-runoak-fill-table-delimiter", "--delimiter"], [0, 6, 1, "cmdoption-runoak-fill-table-missing-value-token", "--missing-value-token"], [0, 6, 1, "cmdoption-runoak-fill-table-allow-missing", "--no-allow-missing"], [0, 6, 1, "cmdoption-runoak-fill-table-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-fill-table-o", "--output"], [0, 6, 1, "cmdoption-runoak-fill-table-relation", "--relation"], [0, 6, 1, "cmdoption-runoak-fill-table-relation-file", "--relation-file"], [0, 6, 1, "cmdoption-runoak-fill-table-schema", "--schema"], [0, 6, 1, "cmdoption-runoak-fill-table-o", "-o"], [0, 6, 1, "cmdoption-runoak-fill-table-arg-TABLE_FILE", "TABLE_FILE"]], "runoak-generate-definitions": [[0, 6, 1, "cmdoption-runoak-generate-definitions-apply-patch", "--apply-patch"], [0, 6, 1, "cmdoption-runoak-generate-definitions-apply-patch", "--no-apply-patch"], [0, 6, 1, "cmdoption-runoak-generate-definitions-o", "--output"], [0, 6, 1, "cmdoption-runoak-generate-definitions-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-generate-definitions-patch", "--patch"], [0, 6, 1, "cmdoption-runoak-generate-definitions-patch-format", "--patch-format"], [0, 6, 1, "cmdoption-runoak-generate-definitions-style-hints", "--style-hints"], [0, 6, 1, "cmdoption-runoak-generate-definitions-O", "-O"], [0, 6, 1, "cmdoption-runoak-generate-definitions-o", "-o"], [0, 6, 1, "cmdoption-runoak-generate-definitions-arg-TERMS", "TERMS"]], "runoak-generate-disjoints": [[0, 6, 1, "cmdoption-runoak-generate-disjoints-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-exclude-existing", "--exclude-existing"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-M", "--min-descendants"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-exclude-existing", "--no-exclude-existing"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-o", "--output"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-M", "-M"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-O", "-O"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-o", "-o"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-p", "-p"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-arg-TERMS", "TERMS"]], "runoak-generate-logical-definitions": [[0, 6, 1, "cmdoption-runoak-generate-logical-definitions-analyze", "--analyze"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-fill", "--fill"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-analyze", "--no-analyze"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-fill", "--no-fill"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-parse", "--no-parse"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-show-extract", "--no-show-extract"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-unmelt", "--no-unmelt"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-o", "--output"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-parse", "--parse"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-P", "--patterns-file"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-show-extract", "--show-extract"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-unmelt", "--unmelt"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-O", "-O"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-P", "-P"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-o", "-o"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-arg-TERMS", "TERMS"]], "runoak-generate-synonyms": [[0, 6, 1, "cmdoption-runoak-generate-synonyms-apply-patch", "--apply-patch"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-apply-patch", "--no-apply-patch"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-o", "--output"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-patch", "--patch"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-patch-format", "--patch-format"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-R", "--rules-file"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-O", "-O"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-R", "-R"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-o", "-o"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-arg-TERMS", "TERMS"]], "runoak-info": [[0, 6, 1, "cmdoption-runoak-info-D", "--display"], [0, 6, 1, "cmdoption-runoak-info-o", "--output"], [0, 6, 1, "cmdoption-runoak-info-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-info-D", "-D"], [0, 6, 1, "cmdoption-runoak-info-O", "-O"], [0, 6, 1, "cmdoption-runoak-info-o", "-o"], [0, 6, 1, "cmdoption-runoak-info-arg-TERMS", "TERMS"]], "runoak-information-content": [[0, 6, 1, "cmdoption-runoak-information-content-use-associations", "--no-use-associations"], [0, 6, 1, "cmdoption-runoak-information-content-o", "--output"], [0, 6, 1, "cmdoption-runoak-information-content-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-information-content-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-information-content-use-associations", "--use-associations"], [0, 6, 1, "cmdoption-runoak-information-content-O", "-O"], [0, 6, 1, "cmdoption-runoak-information-content-o", "-o"], [0, 6, 1, "cmdoption-runoak-information-content-p", "-p"], [0, 6, 1, "cmdoption-runoak-information-content-arg-TERMS", "TERMS"]], "runoak-labels": [[0, 6, 1, "cmdoption-runoak-labels-all-languages", "--all-languages"], [0, 6, 1, "cmdoption-runoak-labels-D", "--display"], [0, 6, 1, "cmdoption-runoak-labels-if-absent", "--if-absent"], [0, 6, 1, "cmdoption-runoak-labels-all-languages", "--no-all-languages"], [0, 6, 1, "cmdoption-runoak-labels-pivot-languages", "--no-pivot-languages"], [0, 6, 1, "cmdoption-runoak-labels-o", "--output"], [0, 6, 1, "cmdoption-runoak-labels-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-labels-pivot-languages", "--pivot-languages"], [0, 6, 1, "cmdoption-runoak-labels-S", "--set-value"], [0, 6, 1, "cmdoption-runoak-labels-D", "-D"], [0, 6, 1, "cmdoption-runoak-labels-O", "-O"], [0, 6, 1, "cmdoption-runoak-labels-S", "-S"], [0, 6, 1, "cmdoption-runoak-labels-o", "-o"], [0, 6, 1, "cmdoption-runoak-labels-arg-TERMS", "TERMS"]], "runoak-leafs": [[0, 6, 1, "cmdoption-runoak-leafs-filter-obsoletes", "--filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-leafs-filter-obsoletes", "--no-filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-leafs-o", "--output"], [0, 6, 1, "cmdoption-runoak-leafs-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-leafs-o", "-o"], [0, 6, 1, "cmdoption-runoak-leafs-p", "-p"]], "runoak-lexmatch": [[0, 6, 1, "cmdoption-runoak-lexmatch-add-labels", "--add-labels"], [0, 6, 1, "cmdoption-runoak-lexmatch-ensure-strict-prefixes", "--ensure-strict-prefixes"], [0, 6, 1, "cmdoption-runoak-lexmatch-L", "--lexical-index-file"], [0, 6, 1, "cmdoption-runoak-lexmatch-add-labels", "--no-add-labels"], [0, 6, 1, "cmdoption-runoak-lexmatch-ensure-strict-prefixes", "--no-ensure-strict-prefixes"], [0, 6, 1, "cmdoption-runoak-lexmatch-recreate", "--no-recreate"], [0, 6, 1, "cmdoption-runoak-lexmatch-o", "--output"], [0, 6, 1, "cmdoption-runoak-lexmatch-recreate", "--recreate"], [0, 6, 1, "cmdoption-runoak-lexmatch-R", "--rules-file"], [0, 6, 1, "cmdoption-runoak-lexmatch-L", "-L"], [0, 6, 1, "cmdoption-runoak-lexmatch-R", "-R"], [0, 6, 1, "cmdoption-runoak-lexmatch-o", "-o"], [0, 6, 1, "cmdoption-runoak-lexmatch-arg-TERMS", "TERMS"]], "runoak-lint": [[0, 6, 1, "cmdoption-runoak-lint-dry-run", "--dry-run"], [0, 6, 1, "cmdoption-runoak-lint-dry-run", "--no-dry-run"], [0, 6, 1, "cmdoption-runoak-lint-o", "--output"], [0, 6, 1, "cmdoption-runoak-lint-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-lint-report-format", "--report-format"], [0, 6, 1, "cmdoption-runoak-lint-O", "-O"], [0, 6, 1, "cmdoption-runoak-lint-o", "-o"]], "runoak-logical-definitions": [[0, 6, 1, "cmdoption-runoak-logical-definitions-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-logical-definitions-if-absent", "--if-absent"], [0, 6, 1, "cmdoption-runoak-logical-definitions-matrix-axes", "--matrix-axes"], [0, 6, 1, "cmdoption-runoak-logical-definitions-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-logical-definitions-unmelt", "--no-unmelt"], [0, 6, 1, "cmdoption-runoak-logical-definitions-o", "--output"], [0, 6, 1, "cmdoption-runoak-logical-definitions-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-logical-definitions-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-logical-definitions-S", "--set-value"], [0, 6, 1, "cmdoption-runoak-logical-definitions-unmelt", "--unmelt"], [0, 6, 1, "cmdoption-runoak-logical-definitions-O", "-O"], [0, 6, 1, "cmdoption-runoak-logical-definitions-S", "-S"], [0, 6, 1, "cmdoption-runoak-logical-definitions-o", "-o"], [0, 6, 1, "cmdoption-runoak-logical-definitions-p", "-p"], [0, 6, 1, "cmdoption-runoak-logical-definitions-arg-TERMS", "TERMS"]], "runoak-mappings": [[0, 6, 1, "cmdoption-runoak-mappings-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-mappings-mapper", "--mapper"], [0, 6, 1, "cmdoption-runoak-mappings-M", "--maps-to-source"], [0, 6, 1, "cmdoption-runoak-mappings-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-mappings-o", "--output"], [0, 6, 1, "cmdoption-runoak-mappings-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-mappings-M", "-M"], [0, 6, 1, "cmdoption-runoak-mappings-O", "-O"], [0, 6, 1, "cmdoption-runoak-mappings-o", "-o"], [0, 6, 1, "cmdoption-runoak-mappings-arg-TERMS", "TERMS"]], "runoak-migrate-curies": [[0, 6, 1, "cmdoption-runoak-migrate-curies-replace", "--no-replace"], [0, 6, 1, "cmdoption-runoak-migrate-curies-o", "--output"], [0, 6, 1, "cmdoption-runoak-migrate-curies-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-migrate-curies-replace", "--replace"], [0, 6, 1, "cmdoption-runoak-migrate-curies-O", "-O"], [0, 6, 1, "cmdoption-runoak-migrate-curies-o", "-o"], [0, 6, 1, "cmdoption-runoak-migrate-curies-arg-CURIE_PAIRS", "CURIE_PAIRS"]], "runoak-normalize": [[0, 6, 1, "cmdoption-runoak-normalize-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-normalize-M", "--maps-to-source"], [0, 6, 1, "cmdoption-runoak-normalize-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-normalize-o", "--output"], [0, 6, 1, "cmdoption-runoak-normalize-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-normalize-M", "-M"], [0, 6, 1, "cmdoption-runoak-normalize-O", "-O"], [0, 6, 1, "cmdoption-runoak-normalize-o", "-o"], [0, 6, 1, "cmdoption-runoak-normalize-arg-TERMS", "TERMS"]], "runoak-obsoletes": [[0, 6, 1, "cmdoption-runoak-obsoletes-include-merged", "--include-merged"], [0, 6, 1, "cmdoption-runoak-obsoletes-include-merged", "--no-include-merged"], [0, 6, 1, "cmdoption-runoak-obsoletes-show-migration-relationships", "--no-show-migration-relationships"], [0, 6, 1, "cmdoption-runoak-obsoletes-o", "--output"], [0, 6, 1, "cmdoption-runoak-obsoletes-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-obsoletes-show-migration-relationships", "--show-migration-relationships"], [0, 6, 1, "cmdoption-runoak-obsoletes-O", "-O"], [0, 6, 1, "cmdoption-runoak-obsoletes-o", "-o"], [0, 6, 1, "cmdoption-runoak-obsoletes-arg-TERMS", "TERMS"]], "runoak-ontologies": [[0, 6, 1, "cmdoption-runoak-ontologies-o", "--output"], [0, 6, 1, "cmdoption-runoak-ontologies-o", "-o"]], "runoak-ontology-metadata": [[0, 6, 1, "cmdoption-runoak-ontology-metadata-all", "--all"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-all", "--no-all"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-o", "--output"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-O", "-O"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-o", "-o"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-arg-ONTOLOGIES", "ONTOLOGIES"]], "runoak-ontology-versions": [[0, 6, 1, "cmdoption-runoak-ontology-versions-all", "--all"], [0, 6, 1, "cmdoption-runoak-ontology-versions-all", "--no-all"], [0, 6, 1, "cmdoption-runoak-ontology-versions-o", "--output"], [0, 6, 1, "cmdoption-runoak-ontology-versions-o", "-o"], [0, 6, 1, "cmdoption-runoak-ontology-versions-arg-ONTOLOGIES", "ONTOLOGIES"]], "runoak-paths": [[0, 6, 1, "cmdoption-runoak-paths-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-paths-C", "--configure"], [0, 6, 1, "cmdoption-runoak-paths-directed", "--directed"], [0, 6, 1, "cmdoption-runoak-paths-exclude-predicates", "--exclude-predicates"], [0, 6, 1, "cmdoption-runoak-paths-include-predicates", "--include-predicates"], [0, 6, 1, "cmdoption-runoak-paths-narrow", "--narrow"], [0, 6, 1, "cmdoption-runoak-paths-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-paths-directed", "--no-directed"], [0, 6, 1, "cmdoption-runoak-paths-include-predicates", "--no-include-predicates"], [0, 6, 1, "cmdoption-runoak-paths-narrow", "--no-narrow"], [0, 6, 1, "cmdoption-runoak-paths-viz", "--no-viz"], [0, 6, 1, "cmdoption-runoak-paths-o", "--output"], [0, 6, 1, "cmdoption-runoak-paths-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-paths-predicate-weights", "--predicate-weights"], [0, 6, 1, "cmdoption-runoak-paths-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-paths-S", "--stylemap"], [0, 6, 1, "cmdoption-runoak-paths-target", "--target"], [0, 6, 1, "cmdoption-runoak-paths-viz", "--viz"], [0, 6, 1, "cmdoption-runoak-paths-C", "-C"], [0, 6, 1, "cmdoption-runoak-paths-O", "-O"], [0, 6, 1, "cmdoption-runoak-paths-S", "-S"], [0, 6, 1, "cmdoption-runoak-paths-o", "-o"], [0, 6, 1, "cmdoption-runoak-paths-p", "-p"], [0, 6, 1, "cmdoption-runoak-paths-arg-TERMS", "TERMS"]], "runoak-prefixes": [[0, 6, 1, "cmdoption-runoak-prefixes-used-only", "--no-used-only"], [0, 6, 1, "cmdoption-runoak-prefixes-o", "--output"], [0, 6, 1, "cmdoption-runoak-prefixes-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-prefixes-used-only", "--used-only"], [0, 6, 1, "cmdoption-runoak-prefixes-O", "-O"], [0, 6, 1, "cmdoption-runoak-prefixes-o", "-o"], [0, 6, 1, "cmdoption-runoak-prefixes-arg-TERMS", "TERMS"]], "runoak-query": [[0, 6, 1, "cmdoption-runoak-query-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-query-L", "--label-fields"], [0, 6, 1, "cmdoption-runoak-query-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-query-o", "--output"], [0, 6, 1, "cmdoption-runoak-query-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-query-P", "--prefixes"], [0, 6, 1, "cmdoption-runoak-query-q", "--query"], [0, 6, 1, "cmdoption-runoak-query-L", "-L"], [0, 6, 1, "cmdoption-runoak-query-O", "-O"], [0, 6, 1, "cmdoption-runoak-query-P", "-P"], [0, 6, 1, "cmdoption-runoak-query-o", "-o"], [0, 6, 1, "cmdoption-runoak-query-q", "-q"]], "runoak-relationships": [[0, 6, 1, "cmdoption-runoak-relationships-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-relationships-direction", "--direction"], [0, 6, 1, "cmdoption-runoak-relationships-if-absent", "--if-absent"], [0, 6, 1, "cmdoption-runoak-relationships-include-abox", "--include-abox"], [0, 6, 1, "cmdoption-runoak-relationships-include-entailed", "--include-entailed"], [0, 6, 1, "cmdoption-runoak-relationships-include-metadata", "--include-metadata"], [0, 6, 1, "cmdoption-runoak-relationships-include-tbox", "--include-tbox"], [0, 6, 1, "cmdoption-runoak-relationships-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-relationships-include-abox", "--no-include-abox"], [0, 6, 1, "cmdoption-runoak-relationships-include-entailed", "--no-include-entailed"], [0, 6, 1, "cmdoption-runoak-relationships-include-metadata", "--no-include-metadata"], [0, 6, 1, "cmdoption-runoak-relationships-include-tbox", "--no-include-tbox"], [0, 6, 1, "cmdoption-runoak-relationships-o", "--output"], [0, 6, 1, "cmdoption-runoak-relationships-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-relationships-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-relationships-S", "--set-value"], [0, 6, 1, "cmdoption-runoak-relationships-O", "-O"], [0, 6, 1, "cmdoption-runoak-relationships-S", "-S"], [0, 6, 1, "cmdoption-runoak-relationships-o", "-o"], [0, 6, 1, "cmdoption-runoak-relationships-p", "-p"], [0, 6, 1, "cmdoption-runoak-relationships-arg-TERMS", "TERMS"]], "runoak-rollup": [[0, 6, 1, "cmdoption-runoak-rollup-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-rollup-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-rollup-object-group", "--object-group"], [0, 6, 1, "cmdoption-runoak-rollup-o", "--output"], [0, 6, 1, "cmdoption-runoak-rollup-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-rollup-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-rollup-O", "-O"], [0, 6, 1, "cmdoption-runoak-rollup-o", "-o"], [0, 6, 1, "cmdoption-runoak-rollup-p", "-p"], [0, 6, 1, "cmdoption-runoak-rollup-arg-TERMS", "TERMS"]], "runoak-roots": [[0, 6, 1, "cmdoption-runoak-roots-A", "--annotated-roots"], [0, 6, 1, "cmdoption-runoak-roots-P", "--has-prefix"], [0, 6, 1, "cmdoption-runoak-roots-A", "--no-A"], [0, 6, 1, "cmdoption-runoak-roots-A", "--no-annotated-roots"], [0, 6, 1, "cmdoption-runoak-roots-o", "--output"], [0, 6, 1, "cmdoption-runoak-roots-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-roots-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-roots-A", "-A"], [0, 6, 1, "cmdoption-runoak-roots-O", "-O"], [0, 6, 1, "cmdoption-runoak-roots-P", "-P"], [0, 6, 1, "cmdoption-runoak-roots-o", "-o"], [0, 6, 1, "cmdoption-runoak-roots-p", "-p"]], "runoak-search": [[0, 6, 1, "cmdoption-runoak-search-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-search-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-search-o", "--output"], [0, 6, 1, "cmdoption-runoak-search-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-search-O", "-O"], [0, 6, 1, "cmdoption-runoak-search-o", "-o"], [0, 6, 1, "cmdoption-runoak-search-arg-TERMS", "TERMS"]], "runoak-set-apikey": [[0, 6, 1, "cmdoption-runoak-set-apikey-e", "--endpoint"], [0, 6, 1, "cmdoption-runoak-set-apikey-e", "-e"], [0, 6, 1, "cmdoption-runoak-set-apikey-arg-KEYVAL", "KEYVAL"]], "runoak-siblings": [[0, 6, 1, "cmdoption-runoak-siblings-o", "--output"], [0, 6, 1, "cmdoption-runoak-siblings-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-siblings-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-siblings-O", "-O"], [0, 6, 1, "cmdoption-runoak-siblings-o", "-o"], [0, 6, 1, "cmdoption-runoak-siblings-p", "-p"], [0, 6, 1, "cmdoption-runoak-siblings-arg-TERMS", "TERMS"]], "runoak-similarity-pair": [[0, 6, 1, "cmdoption-runoak-similarity-pair-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-similarity-pair-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-similarity-pair-o", "--output"], [0, 6, 1, "cmdoption-runoak-similarity-pair-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-similarity-pair-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-similarity-pair-O", "-O"], [0, 6, 1, "cmdoption-runoak-similarity-pair-o", "-o"], [0, 6, 1, "cmdoption-runoak-similarity-pair-p", "-p"], [0, 6, 1, "cmdoption-runoak-similarity-pair-arg-TERMS", "TERMS"]], "runoak-similarity": [[0, 6, 1, "cmdoption-runoak-similarity-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-similarity-information-content-file", "--information-content-file"], [0, 6, 1, "cmdoption-runoak-similarity-main-score-field", "--main-score-field"], [0, 6, 1, "cmdoption-runoak-similarity-min-ancestor-information-content", "--min-ancestor-information-content"], [0, 6, 1, "cmdoption-runoak-similarity-min-jaccard-similarity", "--min-jaccard-similarity"], [0, 6, 1, "cmdoption-runoak-similarity-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-similarity-o", "--output"], [0, 6, 1, "cmdoption-runoak-similarity-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-similarity-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-similarity-set1-file", "--set1-file"], [0, 6, 1, "cmdoption-runoak-similarity-set2-file", "--set2-file"], [0, 6, 1, "cmdoption-runoak-similarity-O", "-O"], [0, 6, 1, "cmdoption-runoak-similarity-o", "-o"], [0, 6, 1, "cmdoption-runoak-similarity-p", "-p"], [0, 6, 1, "cmdoption-runoak-similarity-arg-TERMS", "TERMS"]], "runoak-singletons": [[0, 6, 1, "cmdoption-runoak-singletons-filter-obsoletes", "--filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-singletons-filter-obsoletes", "--no-filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-singletons-o", "--output"], [0, 6, 1, "cmdoption-runoak-singletons-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-singletons-o", "-o"], [0, 6, 1, "cmdoption-runoak-singletons-p", "-p"]], "runoak-statistics": [[0, 6, 1, "cmdoption-runoak-statistics-X", "--compare-with"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-defined-by", "--group-by-defined-by"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-obo-namespace", "--group-by-obo-namespace"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-prefix", "--group-by-prefix"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-property", "--group-by-property"], [0, 6, 1, "cmdoption-runoak-statistics-P", "--has-prefix"], [0, 6, 1, "cmdoption-runoak-statistics-include-residuals", "--include-residuals"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-defined-by", "--no-group-by-defined-by"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-obo-namespace", "--no-group-by-obo-namespace"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-prefix", "--no-group-by-prefix"], [0, 6, 1, "cmdoption-runoak-statistics-include-residuals", "--no-include-residuals"], [0, 6, 1, "cmdoption-runoak-statistics-o", "--output"], [0, 6, 1, "cmdoption-runoak-statistics-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-statistics-O", "-O"], [0, 6, 1, "cmdoption-runoak-statistics-P", "-P"], [0, 6, 1, "cmdoption-runoak-statistics-X", "-X"], [0, 6, 1, "cmdoption-runoak-statistics-o", "-o"], [0, 6, 1, "cmdoption-runoak-statistics-arg-BRANCHES", "BRANCHES"]], "runoak-subsets": [[0, 6, 1, "cmdoption-runoak-subsets-o", "--output"], [0, 6, 1, "cmdoption-runoak-subsets-o", "-o"]], "runoak-synonymize": [[0, 6, 1, "cmdoption-runoak-synonymize-apply-patch", "--apply-patch"], [0, 6, 1, "cmdoption-runoak-synonymize-apply-patch", "--no-apply-patch"], [0, 6, 1, "cmdoption-runoak-synonymize-o", "--output"], [0, 6, 1, "cmdoption-runoak-synonymize-patch", "--patch"], [0, 6, 1, "cmdoption-runoak-synonymize-R", "--rules-file"], [0, 6, 1, "cmdoption-runoak-synonymize-R", "-R"], [0, 6, 1, "cmdoption-runoak-synonymize-o", "-o"], [0, 6, 1, "cmdoption-runoak-synonymize-arg-TERMS", "TERMS"]], "runoak-taxon-constraints": [[0, 6, 1, "cmdoption-runoak-taxon-constraints-A", "--all"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-direct", "--direct"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-M", "--graph-traversal-method"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-include-redundant", "--include-redundant"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-A", "--no-A"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-A", "--no-all"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-direct", "--no-direct"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-include-redundant", "--no-include-redundant"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-o", "--output"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-A", "-A"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-M", "-M"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-O", "-O"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-o", "-o"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-p", "-p"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-arg-TERMS", "TERMS"]], "runoak-term-categories": [[0, 6, 1, "cmdoption-runoak-term-categories-category-system", "--category-system"], [0, 6, 1, "cmdoption-runoak-term-categories-o", "--output"], [0, 6, 1, "cmdoption-runoak-term-categories-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-term-categories-O", "-O"], [0, 6, 1, "cmdoption-runoak-term-categories-o", "-o"], [0, 6, 1, "cmdoption-runoak-term-categories-arg-TERMS", "TERMS"]], "runoak-term-metadata": [[0, 6, 1, "cmdoption-runoak-term-metadata-additional-metadata", "--additional-metadata"], [0, 6, 1, "cmdoption-runoak-term-metadata-additional-metadata", "--no-additional-metadata"], [0, 6, 1, "cmdoption-runoak-term-metadata-o", "--output"], [0, 6, 1, "cmdoption-runoak-term-metadata-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-term-metadata-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-term-metadata-O", "-O"], [0, 6, 1, "cmdoption-runoak-term-metadata-o", "-o"], [0, 6, 1, "cmdoption-runoak-term-metadata-p", "-p"], [0, 6, 1, "cmdoption-runoak-term-metadata-arg-TERMS", "TERMS"]], "runoak-term-subsets": [[0, 6, 1, "cmdoption-runoak-term-subsets-o", "--output"], [0, 6, 1, "cmdoption-runoak-term-subsets-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-term-subsets-O", "-O"], [0, 6, 1, "cmdoption-runoak-term-subsets-o", "-o"], [0, 6, 1, "cmdoption-runoak-term-subsets-arg-TERMS", "TERMS"]], "runoak-terms": [[0, 6, 1, "cmdoption-runoak-terms-filter-obsoletes", "--filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-terms-filter-obsoletes", "--no-filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-terms-o", "--output"], [0, 6, 1, "cmdoption-runoak-terms-owl-type", "--owl-type"], [0, 6, 1, "cmdoption-runoak-terms-o", "-o"]], "runoak-termset-similarity": [[0, 6, 1, "cmdoption-runoak-termset-similarity-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-termset-similarity-information-content-file", "--information-content-file"], [0, 6, 1, "cmdoption-runoak-termset-similarity-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-termset-similarity-o", "--output"], [0, 6, 1, "cmdoption-runoak-termset-similarity-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-termset-similarity-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-termset-similarity-O", "-O"], [0, 6, 1, "cmdoption-runoak-termset-similarity-o", "-o"], [0, 6, 1, "cmdoption-runoak-termset-similarity-p", "-p"], [0, 6, 1, "cmdoption-runoak-termset-similarity-arg-TERMS", "TERMS"]], "runoak-transform": [[0, 6, 1, "cmdoption-runoak-transform-c", "--config-file"], [0, 6, 1, "cmdoption-runoak-transform-o", "--output"], [0, 6, 1, "cmdoption-runoak-transform-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-transform-t", "--transform"], [0, 6, 1, "cmdoption-runoak-transform-O", "-O"], [0, 6, 1, "cmdoption-runoak-transform-c", "-c"], [0, 6, 1, "cmdoption-runoak-transform-o", "-o"], [0, 6, 1, "cmdoption-runoak-transform-t", "-t"], [0, 6, 1, "cmdoption-runoak-transform-arg-TERMS", "TERMS"]], "runoak-tree": [[0, 6, 1, "cmdoption-runoak-tree-add-mrcas", "--add-mrcas"], [0, 6, 1, "cmdoption-runoak-tree-C", "--configure"], [0, 6, 1, "cmdoption-runoak-tree-D", "--display"], [0, 6, 1, "cmdoption-runoak-tree-down", "--down"], [0, 6, 1, "cmdoption-runoak-tree-gap-fill", "--gap-fill"], [0, 6, 1, "cmdoption-runoak-tree-max-hops", "--max-hops"], [0, 6, 1, "cmdoption-runoak-tree-add-mrcas", "--no-add-mrcas"], [0, 6, 1, "cmdoption-runoak-tree-down", "--no-down"], [0, 6, 1, "cmdoption-runoak-tree-gap-fill", "--no-gap-fill"], [0, 6, 1, "cmdoption-runoak-tree-o", "--output"], [0, 6, 1, "cmdoption-runoak-tree-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-tree-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-tree-root", "--root"], [0, 6, 1, "cmdoption-runoak-tree-skip", "--skip"], [0, 6, 1, "cmdoption-runoak-tree-S", "--stylemap"], [0, 6, 1, "cmdoption-runoak-tree-C", "-C"], [0, 6, 1, "cmdoption-runoak-tree-D", "-D"], [0, 6, 1, "cmdoption-runoak-tree-O", "-O"], [0, 6, 1, "cmdoption-runoak-tree-S", "-S"], [0, 6, 1, "cmdoption-runoak-tree-o", "-o"], [0, 6, 1, "cmdoption-runoak-tree-p", "-p"], [0, 6, 1, "cmdoption-runoak-tree-arg-TERMS", "TERMS"]], "runoak-validate-definitions": [[0, 6, 1, "cmdoption-runoak-validate-definitions-skip-text-annotation", "--no-skip-text-annotation"], [0, 6, 1, "cmdoption-runoak-validate-definitions-o", "--output"], [0, 6, 1, "cmdoption-runoak-validate-definitions-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-validate-definitions-skip-text-annotation", "--skip-text-annotation"], [0, 6, 1, "cmdoption-runoak-validate-definitions-O", "-O"], [0, 6, 1, "cmdoption-runoak-validate-definitions-o", "-o"], [0, 6, 1, "cmdoption-runoak-validate-definitions-arg-TERMS", "TERMS"]], "runoak-validate-mappings": [[0, 6, 1, "cmdoption-runoak-validate-mappings-adapter-mapping", "--adapter-mapping"], [0, 6, 1, "cmdoption-runoak-validate-mappings-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-validate-mappings-C", "--configuration-file"], [0, 6, 1, "cmdoption-runoak-validate-mappings-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-validate-mappings-o", "--output"], [0, 6, 1, "cmdoption-runoak-validate-mappings-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-validate-mappings-C", "-C"], [0, 6, 1, "cmdoption-runoak-validate-mappings-O", "-O"], [0, 6, 1, "cmdoption-runoak-validate-mappings-o", "-o"], [0, 6, 1, "cmdoption-runoak-validate-mappings-arg-TERMS", "TERMS"]], "runoak-validate-multiple": [[0, 6, 1, "cmdoption-runoak-validate-multiple-cutoff", "--cutoff"], [0, 6, 1, "cmdoption-runoak-validate-multiple-o", "--output"], [0, 6, 1, "cmdoption-runoak-validate-multiple-s", "--schema"], [0, 6, 1, "cmdoption-runoak-validate-multiple-o", "-o"], [0, 6, 1, "cmdoption-runoak-validate-multiple-s", "-s"], [0, 6, 1, "cmdoption-runoak-validate-multiple-arg-DBS", "DBS"]], "runoak-validate": [[0, 6, 1, "cmdoption-runoak-validate-cutoff", "--cutoff"], [0, 6, 1, "cmdoption-runoak-validate-skip-ontology-rules", "--no-skip-ontology-rules"], [0, 6, 1, "cmdoption-runoak-validate-skip-structural-validation", "--no-skip-structural-validation"], [0, 6, 1, "cmdoption-runoak-validate-o", "--output"], [0, 6, 1, "cmdoption-runoak-validate-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-validate-R", "--rule"], [0, 6, 1, "cmdoption-runoak-validate-skip-ontology-rules", "--skip-ontology-rules"], [0, 6, 1, "cmdoption-runoak-validate-skip-structural-validation", "--skip-structural-validation"], [0, 6, 1, "cmdoption-runoak-validate-O", "-O"], [0, 6, 1, "cmdoption-runoak-validate-R", "-R"], [0, 6, 1, "cmdoption-runoak-validate-o", "-o"], [0, 6, 1, "cmdoption-runoak-validate-arg-TERMS", "TERMS"]], "runoak-viz": [[0, 6, 1, "cmdoption-runoak-viz-add-mrcas", "--add-mrcas"], [0, 6, 1, "cmdoption-runoak-viz-C", "--configure"], [0, 6, 1, "cmdoption-runoak-viz-down", "--down"], [0, 6, 1, "cmdoption-runoak-viz-gap-fill", "--gap-fill"], [0, 6, 1, "cmdoption-runoak-viz-max-hops", "--max-hops"], [0, 6, 1, "cmdoption-runoak-viz-meta", "--meta"], [0, 6, 1, "cmdoption-runoak-viz-add-mrcas", "--no-add-mrcas"], [0, 6, 1, "cmdoption-runoak-viz-down", "--no-down"], [0, 6, 1, "cmdoption-runoak-viz-gap-fill", "--no-gap-fill"], [0, 6, 1, "cmdoption-runoak-viz-meta", "--no-meta"], [0, 6, 1, "cmdoption-runoak-viz-view", "--no-view"], [0, 6, 1, "cmdoption-runoak-viz-o", "--output"], [0, 6, 1, "cmdoption-runoak-viz-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-viz-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-viz-S", "--stylemap"], [0, 6, 1, "cmdoption-runoak-viz-view", "--view"], [0, 6, 1, "cmdoption-runoak-viz-C", "-C"], [0, 6, 1, "cmdoption-runoak-viz-O", "-O"], [0, 6, 1, "cmdoption-runoak-viz-S", "-S"], [0, 6, 1, "cmdoption-runoak-viz-o", "-o"], [0, 6, 1, "cmdoption-runoak-viz-p", "-p"], [0, 6, 1, "cmdoption-runoak-viz-arg-TERMS", "TERMS"]], "runoak": [[0, 6, 1, "cmdoption-runoak-a", "--add"], [0, 6, 1, "cmdoption-runoak-g", "--associations"], [0, 6, 1, "cmdoption-runoak-G", "--associations-type"], [0, 6, 1, "cmdoption-runoak-autosave", "--autosave"], [0, 6, 1, "cmdoption-runoak-import-depth", "--import-depth"], [0, 6, 1, "cmdoption-runoak-i", "--input"], [0, 6, 1, "cmdoption-runoak-I", "--input-type"], [0, 6, 1, "cmdoption-runoak-merge", "--merge"], [0, 6, 1, "cmdoption-runoak-metamodel-mappings", "--metamodel-mappings"], [0, 6, 1, "cmdoption-runoak-named-prefix-map", "--named-prefix-map"], [0, 6, 1, "cmdoption-runoak-autosave", "--no-autosave"], [0, 6, 1, "cmdoption-runoak-merge", "--no-merge"], [0, 6, 1, "cmdoption-runoak-profile", "--no-profile"], [0, 6, 1, "cmdoption-runoak-q", "--no-quiet"], [0, 6, 1, "cmdoption-runoak-stacktrace", "--no-stacktrace"], [0, 6, 1, "cmdoption-runoak-other-languages", "--other-languages"], [0, 6, 1, "cmdoption-runoak-l", "--preferred-language"], [0, 6, 1, "cmdoption-runoak-prefix", "--prefix"], [0, 6, 1, "cmdoption-runoak-profile", "--profile"], [0, 6, 1, "cmdoption-runoak-q", "--quiet"], [0, 6, 1, "cmdoption-runoak-requests-cache-db", "--requests-cache-db"], [0, 6, 1, "cmdoption-runoak-save-as", "--save-as"], [0, 6, 1, "cmdoption-runoak-stacktrace", "--stacktrace"], [0, 6, 1, "cmdoption-runoak-v", "--verbose"], [0, 6, 1, "cmdoption-runoak-W", "--wrap-adapter"], [0, 6, 1, "cmdoption-runoak-G", "-G"], [0, 6, 1, "cmdoption-runoak-I", "-I"], [0, 6, 1, "cmdoption-runoak-W", "-W"], [0, 6, 1, "cmdoption-runoak-a", "-a"], [0, 6, 1, "cmdoption-runoak-g", "-g"], [0, 6, 1, "cmdoption-runoak-i", "-i"], [0, 6, 1, "cmdoption-runoak-l", "-l"], [0, 6, 1, "cmdoption-runoak-q", "-q"], [0, 6, 1, "cmdoption-runoak-v", "-v"]]}, "objtypes": {"0": "py:class", "1": "py:method", "2": "py:attribute", "3": "py:module", "4": "py:function", "5": "py:property", "6": "std:cmdoption"}, "objnames": {"0": ["py", "class", "Python class"], "1": ["py", "method", "Python method"], "2": ["py", "attribute", "Python attribute"], "3": ["py", "module", "Python module"], "4": ["py", "function", "Python function"], "5": ["py", "property", "Python property"], "6": ["std", "cmdoption", "program option"]}, "titleterms": {"command": [0, 1102, 1131, 1134, 1135, 1138, 1139, 1143, 1145, 1150, 1151, 1153, 1155, 1158, 1160, 1162, 1168, 1174, 1179], "line": [0, 1102, 1135, 1138, 1139, 1143, 1145, 1150, 1151, 1153, 1155, 1158, 1160, 1162, 1168, 1174, 1179], "gener": [0, 2, 1104, 1115, 1116], "guidelin": [0, 2], "common": 0, "pattern": [0, 2, 1115], "term": [0, 292, 366, 543, 944, 1102, 1131], "list": [0, 236, 1102], "predic": [0, 76, 184, 288, 353, 650, 959, 960, 1079, 1131], "runoak": 0, "alias": [0, 214, 215, 383, 388, 395, 396, 407, 435, 443, 445, 449, 462, 464, 474, 475, 490, 524, 543, 580, 783, 1109], "exampl": [0, 234, 247, 1102, 1104, 1112, 1119, 1128, 1132, 1134, 1137, 1138, 1139, 1142, 1151, 1153, 1155, 1160, 1161, 1162, 1169, 1177, 1185], "ancestor": [0, 1106, 1119, 1131, 1137], "annot": [0, 388, 395, 481, 556, 849, 851, 857, 858, 859, 862, 863, 864, 870, 871, 872, 875, 876, 878, 885, 888, 889, 890, 891, 892, 894, 895, 896, 898, 900, 901, 906, 913, 914, 917, 998, 1003, 1026, 1104, 1110, 1118, 1125, 1131, 1153, 1155, 1160, 1183], "appli": [0, 1138, 1162], "warn": 0, "obsolet": [0, 1117, 1195], "taxon": [0, 942, 955, 968, 969, 1193], "constraint": [0, 955, 969], "associ": [0, 3, 31, 32, 46, 1110, 1168], "count": 0, "matrix": 0, "axiom": [0, 1, 374, 487, 1117], "cach": [0, 1107], "clear": 0, "l": 0, "definit": [0, 428, 577, 1115, 1125], "descend": 0, "diff": [0, 164, 165], "via": [0, 1125], "map": [0, 1, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1112, 1116, 1125, 1151, 1155, 1160, 1174], "disjoint": 0, "dump": 0, "enrich": [0, 120, 127, 1160, 1170], "expand": 0, "subset": [0, 1, 46, 127, 165, 236, 281, 333, 439, 466, 479, 480, 501, 502, 503, 530, 531, 542, 615, 719, 782, 884, 955, 1003, 1069, 1181, 1191], "extract": 0, "fill": 0, "tabl": [0, 1129], "logic": [0, 1115, 1117], "synonym": [0, 291, 323, 364, 365, 469, 664, 1106, 1109], "info": [0, 1004, 1070], "inform": [0, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1120], "content": [0, 204, 1105, 1113, 1120, 1122, 1129, 1130, 1145, 1154, 1167, 1173], "label": [0, 1, 149, 167, 441, 627, 786, 887, 956, 1102, 1118, 1195], "languag": [0, 628, 1109, 1111, 1125], "leaf": 0, "lexmatch": 0, "lint": 0, "migrat": 0, "curi": [0, 1, 6, 97, 137, 206, 254, 299, 377, 492, 680, 747, 820, 925, 973, 1031, 1102, 1112, 1195], "normal": 0, "ontologi": [0, 1, 164, 165, 535, 536, 615, 837, 899, 1102, 1104, 1106, 1107, 1111, 1118, 1126, 1129, 1137, 1138, 1142, 1157, 1169, 1185, 1188, 1191, 1195], "metadata": [0, 536, 615, 1109, 1117, 1126, 1195], "version": [0, 476, 919, 1126], "path": 0, "prefix": [0, 1, 356, 454, 455, 478, 511, 904, 938, 942, 1112], "queri": [0, 1102, 1104, 1112, 1115, 1131], "relationship": [0, 1, 289, 358, 1119, 1133, 1195], "rollup": 0, "root": 0, "search": [0, 719, 737, 1104, 1109, 1131, 1151, 1166, 1179, 1196], "set": [0, 1102], "apikei": 0, "sibl": 0, "similar": [0, 782, 803, 1120, 1180], "pair": 0, "singleton": 0, "statist": [0, 884, 912, 1106, 1131, 1137, 1182], "see": [0, 373, 402, 415, 420, 436, 438, 462, 479, 480, 497, 598, 1102, 1165], "also": [0, 373, 402, 415, 420, 436, 438, 462, 479, 480, 497, 598, 1165], "categori": [0, 163, 230, 559, 709, 999, 1064], "termset": 0, "transform": [0, 293, 369], "tree": [0, 1131], "valid": [0, 478, 511, 938, 942, 1069, 1115, 1125, 1126, 1137, 1155, 1184], "note": [0, 639, 1119, 1158], "multipl": [0, 1126], "viz": 0, "concept": [1, 1111, 1120, 1132, 1133], "element": [1, 278, 330], "import": [1, 613], "within": 1, "uri": [1, 28, 115, 161, 227, 276, 327, 417, 549, 704, 770, 845, 946, 996, 1058, 1112, 1195], "identifi": [1, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1112], "edg": [1, 386, 433, 1118, 1119], "format": [1, 1104, 1106, 1107, 1111, 1148], "statement": 1, "name": [1, 243, 284, 343], "contribut": [2, 1103, 1104], "report": [2, 955, 1051], "issu": [2, 1128], "give": 2, "feedback": 2, "document": [2, 1129, 1150, 1158, 1167], "code": [2, 1102, 1132, 1134, 1151, 1153, 1155, 1156, 1157, 1159, 1160, 1161, 1163, 1164, 1165, 1166], "understand": [2, 1107], "design": [2, 1101, 1102, 1115], "us": [2, 1101, 1102, 1104, 1107, 1109, 1115, 1119, 1125, 1126, 1131, 1168, 1174], "pleas": 2, "make": [2, 1102], "pull": 2, "request": 2, "all": [2, 1104], "alwai": 2, "write": [2, 1128], "test": [2, 324, 367, 1128], "how": [2, 1102, 1103, 1104, 1106, 1107, 1122, 1125, 1126, 1128, 1135], "plugin": [2, 1125, 1128, 1136], "new": [2, 1128, 1132], "subcommand": 2, "notebook": [2, 1141], "add": 2, "adapt": [2, 1125, 1150, 1151, 1152, 1153, 1155, 1156, 1157, 1158, 1159, 1160, 1161, 1162, 1163, 1164, 1165, 1166, 1185], "implement": [2, 1120, 1128, 1142, 1154, 1166], "util": [2, 1186, 1187, 1188, 1189, 1190, 1191, 1192, 1193, 1194], "function": [2, 1185], "datamodel": [2, 127, 204, 333, 338, 439, 719, 737, 884, 955, 1003, 1069, 1136, 1179, 1190, 1196], "releas": [2, 1128], "pypi": [2, 1128, 1131], "class": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 36, 37, 43, 44, 45, 46, 47, 48, 49, 50, 51, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 155, 159, 163, 165, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 214, 215, 219, 225, 229, 230, 231, 232, 233, 234, 235, 236, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 278, 279, 280, 281, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 329, 330, 331, 332, 333, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 523, 524, 528, 529, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 561, 562, 563, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 575, 577, 578, 579, 580, 581, 582, 584, 585, 586, 587, 588, 589, 590, 591, 593, 594, 595, 596, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 629, 637, 638, 639, 640, 646, 647, 648, 649, 650, 651, 654, 657, 659, 660, 661, 662, 663, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 679, 694, 695, 697, 698, 706, 707, 708, 709, 710, 711, 712, 713, 718, 719, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 763, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 801, 802, 803, 804, 805, 806, 807, 808, 809, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 865, 866, 867, 868, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 881, 882, 883, 884, 885, 887, 888, 889, 890, 891, 892, 894, 895, 896, 897, 898, 899, 900, 901, 903, 904, 905, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1057, 1060, 1061, 1062, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1144, 1170], "inherit": [3, 17, 22, 39, 40, 47, 48, 49, 50, 51, 52, 54, 55, 56, 61, 62, 64, 68, 69, 70, 71, 72, 76, 77, 82, 83, 89, 168, 169, 170, 172, 173, 175, 177, 178, 179, 183, 187, 188, 190, 191, 193, 195, 196, 198, 201, 251, 266, 267, 296, 311, 312, 374, 375, 382, 383, 384, 387, 395, 405, 407, 413, 419, 478, 482, 483, 484, 485, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 523, 524, 529, 532, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 590, 591, 592, 593, 594, 595, 597, 598, 599, 600, 601, 602, 603, 605, 606, 610, 611, 612, 616, 617, 618, 627, 628, 629, 630, 631, 633, 634, 635, 636, 637, 643, 645, 646, 647, 648, 649, 651, 652, 653, 654, 655, 656, 658, 660, 661, 662, 663, 664, 666, 667, 668, 670, 672, 674, 675, 676, 763, 767, 768, 774, 779, 780, 783, 784, 785, 796, 800, 801, 802, 806, 810, 811, 813, 826, 829, 830, 840, 842, 844, 849, 850, 851, 857, 860, 861, 862, 863, 869, 870, 871, 872, 875, 879, 880, 885, 888, 892, 894, 895, 896, 898, 900, 901, 905, 907, 910, 911, 913, 917, 918, 938, 941, 942, 944, 990, 1030, 1037, 1042, 1043, 1045, 1049, 1050, 1051, 1052, 1061, 1062], "slot": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 231, 232, 233, 234, 235, 236, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 281, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 326, 329, 330, 331, 332, 333, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 406, 407, 408, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 490, 491, 499, 501, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 520, 521, 522, 523, 524, 528, 529, 530, 531, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 679, 687, 694, 695, 696, 697, 698, 700, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 763, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1053, 1057, 1060, 1061, 1062, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099], "usag": [3, 23, 24, 41, 42, 95, 155, 166, 167, 175, 181, 184, 193, 198, 199, 214, 219, 225, 252, 264, 266, 267, 271, 297, 309, 311, 312, 313, 318, 319, 320, 323, 324, 375, 382, 384, 386, 387, 388, 390, 395, 396, 398, 404, 405, 412, 413, 414, 419, 478, 481, 482, 483, 486, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 514, 523, 524, 528, 534, 535, 537, 538, 539, 542, 544, 632, 679, 695, 697, 745, 766, 767, 815, 817, 819, 826, 827, 829, 837, 840, 841, 844, 938, 941, 942, 943, 980, 990, 993, 1030, 1045, 1049, 1052, 1057, 1060, 1062, 1102, 1135, 1145, 1150], "schema": [3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 712, 713, 714, 715, 716, 717, 718, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1126], "sourc": [3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1110], "linkml": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 326, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 399, 404, 405, 406, 407, 408, 412, 413, 414, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 497, 499, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 520, 521, 522, 523, 524, 528, 529, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 678, 679, 687, 694, 695, 696, 697, 698, 700, 706, 707, 708, 709, 710, 711, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 745, 763, 766, 767, 768, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 881, 882, 883, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 924, 938, 941, 942, 943, 944, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 980, 990, 991, 992, 993, 995, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1053, 1057, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099], "direct": [3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 96, 124, 155, 159, 214, 215, 219, 225, 251, 252, 264, 265, 266, 267, 271, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 320, 323, 324, 374, 375, 382, 383, 384, 386, 387, 388, 390, 391, 395, 396, 398, 404, 405, 407, 412, 413, 414, 419, 478, 481, 482, 483, 484, 485, 486, 487, 490, 491, 499, 504, 505, 506, 507, 508, 509, 510, 511, 514, 523, 524, 528, 532, 534, 535, 537, 538, 539, 542, 543, 544, 547, 679, 694, 695, 697, 698, 745, 763, 766, 767, 768, 815, 817, 818, 819, 826, 827, 829, 830, 837, 840, 841, 842, 844, 938, 941, 942, 943, 944, 980, 990, 991, 992, 993, 1030, 1037, 1042, 1043, 1045, 1048, 1049, 1050, 1051, 1052, 1057, 1060, 1061, 1062, 1119], "associationchang": 4, "comment": [4, 6, 19, 28, 37, 61, 78, 86, 97, 109, 115, 137, 153, 161, 206, 215, 222, 227, 230, 254, 270, 276, 299, 317, 327, 354, 377, 384, 388, 391, 401, 407, 417, 424, 426, 433, 436, 443, 454, 462, 492, 509, 533, 549, 562, 565, 577, 598, 605, 627, 667, 680, 693, 704, 739, 747, 762, 770, 787, 820, 827, 836, 845, 891, 903, 925, 937, 946, 950, 958, 967, 973, 986, 996, 1031, 1047, 1058], "type": [5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 18, 19, 25, 26, 27, 28, 29, 46, 93, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 112, 113, 114, 115, 116, 127, 136, 137, 138, 139, 140, 141, 143, 144, 145, 146, 147, 148, 149, 151, 152, 153, 156, 157, 158, 160, 161, 162, 165, 202, 205, 206, 207, 208, 209, 210, 211, 212, 213, 217, 218, 220, 221, 222, 223, 224, 226, 227, 228, 236, 247, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 268, 269, 270, 272, 273, 274, 276, 277, 281, 294, 295, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 315, 316, 317, 321, 322, 325, 327, 328, 333, 371, 372, 376, 377, 378, 379, 380, 381, 385, 389, 392, 393, 394, 397, 400, 401, 402, 410, 411, 415, 416, 417, 418, 420, 439, 470, 471, 488, 489, 492, 493, 494, 495, 496, 498, 500, 515, 516, 517, 518, 519, 525, 526, 527, 533, 540, 541, 545, 546, 548, 549, 550, 615, 670, 671, 677, 680, 681, 682, 683, 684, 685, 686, 688, 689, 690, 691, 692, 693, 699, 701, 702, 703, 704, 705, 719, 743, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 764, 765, 769, 770, 771, 772, 782, 812, 816, 820, 821, 822, 823, 824, 825, 828, 831, 832, 833, 834, 835, 836, 838, 839, 843, 845, 846, 884, 916, 923, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 939, 940, 945, 946, 947, 955, 972, 973, 974, 975, 976, 977, 978, 979, 981, 982, 983, 984, 985, 986, 987, 988, 989, 994, 996, 997, 1003, 1028, 1029, 1031, 1032, 1033, 1034, 1035, 1036, 1038, 1039, 1040, 1041, 1044, 1046, 1047, 1054, 1055, 1056, 1058, 1059, 1069, 1095, 1097], "boolean": [5, 93, 136, 205, 253, 298, 376, 488, 677, 746, 816, 923, 972, 1029, 1102, 1196], "date": [7, 40, 98, 138, 207, 255, 300, 378, 493, 574, 681, 748, 821, 926, 974, 1032, 1107], "dateordatetim": [8, 99, 139, 208, 256, 301, 379, 494, 682, 749, 822, 927, 975, 1033], "datetim": [9, 100, 140, 209, 257, 302, 380, 495, 683, 750, 823, 928, 976, 1034], "decim": [10, 101, 141, 210, 258, 303, 381, 496, 684, 751, 824, 929, 977, 1035], "doubl": [11, 102, 143, 211, 259, 304, 385, 498, 685, 752, 825, 930, 978, 1036], "float": [12, 103, 145, 212, 260, 305, 389, 500, 686, 753, 828, 931, 979, 1038], "integ": [13, 104, 146, 213, 261, 306, 392, 515, 688, 754, 831, 932, 981, 1039], "jsonpath": [14, 105, 147, 217, 262, 307, 393, 517, 689, 756, 832, 933, 982, 1040], "jsonpoint": [15, 106, 148, 218, 263, 308, 394, 518, 690, 757, 833, 934, 983, 1041], "ncname": [16, 107, 151, 220, 268, 315, 397, 526, 691, 758, 834, 935, 984, 1044], "negatedassoci": 17, "nodeidentifi": [18, 108, 152, 221, 269, 316, 400, 527, 692, 760, 835, 936, 985, 1046], "objectidentifi": [19, 109, 153, 222, 270, 317, 401, 533, 693, 762, 836, 937, 986, 1047], "pairwisecoassoci": 20, "parserconfigur": 21, "positiveornegativeassoci": 22, "propertyvalu": [23, 407], "rollupgroup": 24, "sparqlpath": [25, 112, 157, 223, 272, 321, 410, 540, 701, 764, 838, 939, 988, 1054], "string": [26, 113, 158, 224, 273, 322, 411, 541, 702, 765, 839, 940, 989, 1055], "time": [27, 114, 160, 226, 274, 325, 416, 546, 703, 769, 843, 945, 994, 1056], "uriorcuri": [29, 116, 162, 228, 277, 328, 418, 550, 705, 771, 846, 947, 997, 1059], "aggregator_knowledge_sourc": 30, "applic": [30, 32, 33, 34, 36, 37, 43, 44, 45, 47, 48, 49, 50, 51, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 163, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 421, 422, 423, 424, 425, 426, 427, 428, 429, 431, 432, 433, 434, 435, 436, 437, 438, 440, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 462, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 512, 513, 529, 551, 552, 553, 554, 555, 556, 557, 558, 559, 561, 562, 563, 564, 565, 566, 568, 569, 570, 571, 572, 573, 574, 575, 577, 578, 579, 580, 581, 582, 584, 585, 586, 587, 588, 589, 590, 591, 593, 594, 595, 596, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 629, 637, 638, 639, 640, 646, 647, 648, 649, 650, 651, 654, 657, 659, 660, 661, 662, 663, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 706, 707, 708, 709, 710, 711, 712, 713, 718, 720, 721, 722, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 773, 774, 775, 776, 777, 778, 779, 780, 781, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 801, 802, 803, 804, 805, 806, 807, 808, 809, 847, 848, 849, 850, 851, 856, 857, 858, 859, 862, 863, 865, 866, 867, 868, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 881, 882, 883, 885, 887, 888, 889, 890, 891, 892, 894, 895, 896, 897, 898, 899, 900, 901, 903, 904, 905, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099], "properti": [30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 163, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 329, 330, 331, 332, 334, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 373, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 472, 473, 474, 475, 476, 477, 512, 513, 520, 521, 522, 529, 537, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 672, 673, 674, 675, 676, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 738, 739, 740, 741, 742, 773, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 813, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 913, 914, 915, 917, 918, 919, 920, 921, 922, 948, 949, 950, 951, 952, 953, 954, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 970, 971, 998, 999, 1000, 1001, 1002, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1027, 1064, 1065, 1066, 1067, 1068, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1098, 1099, 1118], "associations_for_subjects_in_common": 33, "closure_delta": 34, "closure_information_content_delta": 35, "closure_pred": 36, "core_tripl": 38, "creation_d": [39, 570], "denormalized_slot": 41, "mixin": [41, 42, 166, 167, 175, 181, 184, 193, 198, 199, 483, 491, 499, 504, 505, 506, 507, 508, 509, 510, 528, 534, 538, 539, 632, 980], "diff_slot": 42, "evidence_typ": 43, "group_object": 44, "include_association_attribut": 45, "oak": [46, 1101, 1102, 1104, 1109, 1110, 1111, 1113, 1115, 1116, 1125, 1129, 1131, 1167, 1195], "data": [46, 236, 1101, 1109, 1110, 1120, 1174], "model": [46, 236, 1010, 1101, 1109, 1110, 1115, 1120, 1125, 1165, 1174], "enumer": [46, 127, 165, 236, 281, 333, 439, 615, 719, 782, 884, 955, 1003, 1069], "is_creat": 47, "is_delet": 48, "is_gener": 49, "is_migr": 50, "is_speci": 51, "modification_d": 52, "negat": 53, "new_dat": 54, "new_object": 55, "new_pred": 56, "number_subject_unique_to_entity1": 57, "number_subject_unique_to_entity2": 58, "number_subjects_in_common": 59, "number_subjects_in_union": 60, "object": [61, 181, 640, 1075], "object1": 62, "object1_label": 63, "object2": 64, "object2_label": 65, "object_closur": 66, "object_closure_label": 67, "object_label": [68, 728, 797, 1014], "old_dat": 69, "old_object": 70, "old_object_obsolet": 71, "old_pred": 72, "original_object": 73, "original_pred": 74, "original_subject": 75, "predicate_label": 77, "preserve_negated_associ": 78, "primary_knowledge_sourc": 79, "property_valu": 80, "proportion_subjects_in_common": 81, "publication_is_ad": 82, "publication_is_delet": 83, "public": 84, "sub_group": 85, "subject": [86, 199, 967, 1088], "subject_closur": 87, "subject_closure_label": 88, "subject_label": [89, 807, 1021], "subjects_in_common": 90, "summary_group": 91, "supporting_object": 92, "classenrichmentconfigur": 94, "classenrichmentresult": 95, "classenrichmentresultset": 96, "posit": [110, 154, 245, 987], "enum": [111, 142, 150, 216, 275, 326, 399, 406, 408, 497, 678, 687, 696, 700, 924, 995, 1053, 1063], "sortfieldenum": 111, "permiss": [111, 142, 150, 216, 275, 326, 399, 403, 406, 408, 409, 497, 678, 687, 696, 700, 924, 995, 1053, 1063], "valu": [111, 142, 150, 216, 275, 326, 399, 403, 406, 408, 409, 497, 678, 687, 696, 700, 924, 995, 1053, 1063], "ancestor_of_more_informative_result": 117, "background_count": 118, "background_tot": 119, "class_id": 121, "class_label": 122, "descendant_of_more_informative_result": 123, "false_discovery_r": 125, "fold_enrich": 126, "p_valu": 128, "p_value_adjust": 129, "p_value_cutoff": 130, "probabl": 131, "rank": [132, 734], "result": [133, 185, 736, 1052, 1069, 1084, 1100, 1102, 1131], "sample_count": 134, "sample_tot": 135, "diffcategori": 142, "entityrefer": 144, "mappingcardinalityenum": 150, "relationaldiff": 155, "structurediffresultset": 159, "cross": [164, 165, 1116], "is_funct": 166, "left_object_id": 168, "left_object_is_funct": 169, "left_object_label": 170, "left_object_nam": 171, "left_predicate_id": 172, "left_predicate_label": 173, "left_predicate_nam": 174, "left_sid": 175, "left_sourc": 176, "left_subject_id": 177, "left_subject_is_funct": 178, "left_subject_label": 179, "left_subject_nam": 180, "object_mapping_cardin": 182, "object_mapping_pred": 183, "right_intermediate_id": 186, "right_object_id": 187, "right_object_label": 188, "right_object_nam": 189, "right_predicate_id": 190, "right_predicate_label": 191, "right_predicate_nam": 192, "right_sid": 193, "right_sourc": 194, "right_subject_id": 195, "right_subject_label": 196, "right_subject_nam": 197, "side": 198, "subject_mapping_cardin": 200, "subject_mapping_pred": 201, "funowl": [203, 1152, 1185], "itemlist": [214, 238, 240], "itemlistcollect": 215, "itemlistordertyp": 216, "listitem": 219, "thing": [225, 544], "additionaltyp": 229, "descript": [231, 329, 873, 952], "elementid": 232, "id": [233, 438, 478, 511, 610, 781, 883, 938, 942, 954, 1001, 1068, 1102], "idtyp": 234, "item": [236, 237], "itemlistel": 239, "itemmetadatamap": 241, "keyword": 242, "numberofitem": 244, "previousitem": 246, "url": [248, 673, 1098], "wasgeneratedbi": 249, "kgcl": [250, 1138, 1162], "activ": [251, 296], "ani": [252, 297, 486, 1104, 1117], "lexicalgroup": [264, 309], "lexicalindex": [265, 310], "lexicaltransform": [266, 311], "lexicaltransformationpipelin": [267, 312], "relationshiptoterm": [271, 320], "transformationtyp": [275, 326, 995], "element_term": [279, 331], "group": [280, 332], "lexic": [281, 282, 335, 1102, 1104, 1189], "index": [281, 282, 283, 335, 336], "lexican": [283, 336], "param": [285, 348], "pipelin": [286, 287, 349, 350], "mappingrul": 313, "mappingrulecollect": 314, "postcondit": [318, 351], "precondit": [319, 352], "rule": [333, 337, 338, 360], "input": [334, 1102, 1161], "mapping_source_one_of": 339, "match": [340, 631], "match_scop": 341, "minimum_confid": 342, "object_match_field_one_of": 344, "object_source_one_of": 345, "onewai": 346, "output": 347, "predicate_id": [354, 1017, 1080], "predicate_id_one_of": 355, "qualifi": 357, "replac": 359, "subject_match_field_one_of": 362, "subject_source_one_of": 363, "the_rul": 368, "transformations_included_in": 370, "weight": 373, "basicpropertyvalu": [375, 422], "definitionpropertyvalu": 382, "disjointclassexpressionsaxiom": [383, 430], "domainrangeaxiom": [384, 432], "equivalentnodesset": [387, 434], "existentialrestrictionexpress": 388, "graph": [390, 437, 1102, 1104, 1109, 1115, 1119, 1131, 1135, 1145, 1146, 1147, 1148, 1149, 1156, 1178, 1187, 1188], "graphdocu": 391, "logicaldefinitionaxiom": [395, 444], "meta": [396, 445], "node": [398, 448, 1045], "nodetypeenum": 399, "oboidentifierstr": 402, "predsenum": 403, "prefixdeclar": 404, "propertychainaxiom": [405, 456, 651], "propertytypeenum": 406, "scopeenum": 408, "scopesenum": 409, "subsetdefinit": [412, 465], "synonympropertyvalu": 413, "synonymtypedefinit": [414, 468], "synonymtypeidentifierstr": 415, "xrefpropertyvalu": 419, "xrefstr": 420, "allvaluesfromedg": 421, "chainpredicateid": 423, "classexpress": [424, 491], "classid": 425, "definedclassid": 427, "deprec": [429, 580], "domainclassid": 431, "fillerid": 435, "genusid": 436, "obograph": [439, 1134, 1175, 1190], "isexact": 440, "lang": 442, "lbl": 443, "namespac": 446, "nodeid": 447, "obj": 449, "obographs_datamodel": 450, "obographs_linkml_model": 451, "pred": 452, "predicateid": 453, "propertyid": 457, "propertytyp": 458, "rangeclassid": 459, "representativenodeid": 460, "representitivenodeid": 461, "restrict": [462, 539], "scope": 463, "sub": 464, "synonymtyp": 467, "unionequivalentto": 472, "unionequivalenttoexpress": 473, "val": 474, "valtyp": 475, "xref": 477, "agent": [478, 815, 848], "allotropepermittedprofil": 479, "allotroperequiredprofil": 480, "annotationproperti": 482, "annotationpropertymixin": 483, "anonym": 484, "anonymousclassexpress": 485, "curieliter": 489, "definitionconstraintcompon": 497, "express": 499, "gopermittedprofil": 501, "gorecommendedprofil": 502, "gorequiredprofil": 503, "hascategori": 504, "haslifecycl": 505, "hasmap": 506, "hasminimalmetadata": 507, "hasproven": 508, "hassynonym": 509, "hasuserinform": 510, "homosapien": 511, "iedb_alternative_term": 512, "isa_alternative_term": 513, "imag": [514, 611], "irityp": 516, "labeltyp": 519, "ncit_definition_sourc": 520, "ncit_term_sourc": 521, "ncit_term_typ": 522, "namedindividu": 523, "namedobject": 524, "narrativetext": 525, "notobsoleteaspect": 528, "obo_foundry_unique_label": 529, "todo": [529, 551, 554, 555, 563, 570, 578, 582, 584, 587, 597, 605, 617, 618, 651, 654, 656, 657, 661, 668, 695, 773, 959, 1049, 1061], "obipermittedprofil": 530, "obirequiredprofil": 531, "objectproperti": 532, "obsoleteaspect": 534, "propertyexpress": 538, "tidystr": 545, "transitiveproperti": 547, "urlliter": 548, "allvaluesfrom": 551, "alternative_term": 552, "annotatedproperti": 553, "annotatedsourc": 554, "annotatedtarget": 555, "broadmatch": 557, "cardin": 558, "changenot": 560, "closematch": 561, "complementof": 563, "conformsto": 564, "consid": 565, "contributor": 566, "core_properti": 567, "creat": [568, 1128, 1132], "created_bi": 569, "creator": 571, "curator_not": 572, "database_cross_refer": 573, "date_retriev": 575, "defaultlanguag": 576, "definition_sourc": 578, "depicted_bi": 579, "disconnected_from": 581, "disjointwith": 582, "distinctmemb": 583, "domain": 584, "editor_not": 585, "editor_preferred_term": 586, "equivalentclass": 587, "equivalentproperti": 588, "evid": 589, "exactmatch": 590, "example_of_usag": 591, "excluded_axiom": 592, "excluded_from_qc_check": 593, "excluded_subclassof": 594, "excluded_synonym": 595, "external_ontologi": 596, "hasvalu": 597, "has_alternative_id": 598, "has_axiom_label": 599, "has_broad_synonym": 600, "has_curation_statu": 601, "has_exact_synonym": 602, "has_narrow_synonym": 603, "has_obo_namespac": 604, "has_obsolescence_reason": 605, "has_ontology_root_term": 606, "has_rank": 607, "has_related_synonym": 608, "has_synonym_typ": 609, "imported_from": 612, "in_subset": 614, "informative_properti": 616, "intersectionof": 617, "inverseof": 618, "isdefinedbi": 619, "is_a_defining_property_chain_axiom": 620, "is_a_defining_property_chain_axiom_where_second_argument_is_reflex": 621, "is_class_level": 622, "is_cycl": 623, "is_inf": 624, "is_metadata_tag": 625, "is_transit": 626, "licens": 629, "logical_pred": 630, "match_aspect": 632, "maxqualifiedcardin": 633, "member": 634, "mincardin": 635, "minqualifiedcardin": 636, "narrowmatch": 637, "never_in_taxon": 638, "oboinowl_id": 641, "oboinowl_ontologi": 642, "obsoletion_related_properti": 643, "omo": [644, 1195], "onclass": 645, "onproperti": 646, "oneof": 647, "ontology_term_request": 648, "page": 649, "provenance_properti": 652, "qualifiedcardin": 653, "rang": 654, "reification_pred": 655, "samea": 656, "seealso": 657, "shortcut_annotation_properti": 658, "shorthand": 659, "should_conform_to": 660, "somevaluesfrom": 661, "subclassof": 663, "temporal_interpret": 665, "term_editor": 666, "term_replaced_bi": 667, "term_tracker_item": 668, "titl": [669, 915], "unionof": 672, "versioniri": 674, "versioninfo": 675, "version_properti": 676, "booleanoper": 678, "complexqueri": 679, "graphfunct": 687, "pathexpress": 694, "searchbaseconfigur": 695, "searchproperti": 696, "searchresult": 697, "searchresultset": 698, "searchterm": 699, "searchtermsyntax": 700, "all_of": 706, "any_of": 707, "atom": 708, "configur": 710, "cursor": 711, "force_case_insensit": 712, "graph_pred": 713, "include_alias": [714, 1002], "include_definit": 715, "include_id": 716, "include_label": 717, "include_obsoletes_in_result": 718, "is_complet": 720, "is_fuzzi": 721, "is_parti": 722, "is_regular_express": 723, "limit": [724, 1006], "matches_full_search_term": 725, "none_of": 726, "object_id": [727, 795, 1013, 1076], "object_match_field": 729, "object_sourc": [730, 798, 1015], "object_source_vers": 731, "path_to": 732, "result_count": 735, "search_term": [738, 739], "snippet": 740, "syntax": [741, 1185, 1196], "travers": [742, 1119, 1188], "semsql": 744, "bestmatch": 745, "itemcount": 755, "negativelogvalu": 759, "nonnegativefloat": 761, "pairwisesimilar": 763, "terminfo": 766, "termpairwisesimilar": 767, "termsetpairwisesimilar": 768, "zerotoon": 772, "ancestor_id": 773, "ancestor_information_cont": 774, "ancestor_label": 775, "ancestor_sourc": 776, "average_scor": 777, "best_scor": 778, "cosine_similar": 779, "dice_similar": 780, "semant": [782, 1180], "information_cont": 783, "intersection_count": 784, "jaccard_similar": 785, "match_sourc": 787, "match_source_label": 788, "match_subsum": 789, "match_subsumer_label": 790, "match_target": 791, "match_target_label": 792, "metric": 793, "object_best_match": 794, "object_information_cont": 796, "object_termset": 799, "overlap_coeffici": 800, "phenodigm_scor": 801, "score": 802, "subject_best_match": 804, "subject_id": [805, 1089], "subject_information_cont": 806, "subject_sourc": [808, 1022], "subject_termset": 809, "subsumed_by_scor": 810, "subsumes_scor": 811, "union_count": 813, "sssom": [814, 1116, 1131], "changetypestatist": 817, "contributorrol": 818, "contributorstatist": 819, "facetstatist": 826, "specif": [826, 829, 840], "facetedcount": 827, "globalstatist": 829, "groupedstatist": 830, "summarystatisticcollect": 840, "summarystatisticscalculationact": 841, "summarystatisticsreport": 842, "ungroupedstatist": 844, "acted_on_behalf_of": 847, "annotation_property_count": 849, "anonymous_class_expression_count": 850, "anonymous_individual_count": 851, "by_categori": 852, "by_ontologi": 853, "by_subset": 854, "by_taxon": 855, "change_summari": 856, "class_count": 857, "class_count_by_categori": 858, "class_count_by_subset": 859, "class_count_excluding_deprec": 860, "class_count_with_definit": 861, "class_count_with_text_definit": 862, "class_count_without_text_definit": 863, "class_statistic_group": 864, "compared_with": 865, "contributor_id": 866, "contributor_nam": 867, "contributor_summari": 868, "count_statist": 869, "datatype_property_count": 870, "deprecated_class_count": 871, "deprecated_object_property_count": 872, "description_logic_profil": 874, "distinct_synonym_count": 875, "edge_count_by_pred": 876, "ended_at_tim": 877, "entailed_edge_count_by_pred": 878, "equivalent_classes_axiom_count": 879, "equivalentclasses_axiom_count": 880, "facet": 881, "filtered_count": 882, "summari": [884, 912, 1182], "individual_count": 885, "individual_statistic_group": 886, "mapping_count": 888, "mapping_statement_count_by_object_sourc": 889, "mapping_statement_count_by_pred": 890, "mapping_statement_count_subject_by_object_sourc": 891, "merged_class_count": 892, "metadata_statistic_group": 893, "named_individual_count": 894, "non_deprecated_class_count": 895, "non_deprecated_object_property_count": 896, "normalization_com": 897, "object_property_count": 898, "ontology_count": 900, "owl_axiom_count": 901, "owl_statistic_group": 902, "partit": 903, "property_count": 905, "property_statistic_group": 906, "rdf_triple_count": 907, "role_count": 908, "started_at_tim": 909, "subclass_of_axiom_count": 910, "subset_count": 911, "synonym_statement_count": 913, "synonym_statement_count_by_pred": 914, "unsatisfiable_class_count": 917, "untyped_entity_count": 918, "version_info": 920, "was_associated_with": 921, "was_generated_bi": 922, "configurationopt": 924, "predicateterm": 938, "subjectterm": 941, "taxonconstraint": 943, "assert": 948, "candid": 949, "contradicted_bi": 951, "evolutionari": 953, "never_in": 957, "only_in": 958, "present_in": 961, "present_in_ancestor_of": 962, "redund": 963, "redundant_with": 964, "redundant_with_only_in": 965, "unsatisfi": 970, "via_term": 971, "hasspan": 980, "textannot": 990, "textannotationconfigur": 991, "textannotationresultset": 992, "textualel": 993, "confid": [1000, 1065], "text": [1003, 1025, 1026, 1104, 1109, 1183], "is_longest_match": 1005, "match_str": 1007, "match_typ": 1008, "matches_whole_text": 1009, "object_alias": 1011, "object_categori": 1012, "parent_docu": 1016, "source_text": 1018, "subject_end": 1020, "subject_start": 1023, "subject_text_id": 1024, "token_exclusion_list": 1027, "constraintcompon": 1030, "externalreferencevalidationresult": 1037, "mappingvalidationresult": 1042, "namedresourc": 1043, "repairconfigur": 1048, "repairoper": 1049, "repairreport": 1050, "severityopt": 1053, "typeseveritykeyvalu": 1057, "validationconfigur": 1060, "validationreport": 1061, "validationresult": 1062, "validationresulttyp": 1063, "dry_run": 1066, "http_response_cod": 1067, "instanti": 1071, "max_number_results_per_typ": 1072, "modifi": 1073, "number_of_attempt": 1074, "object_info": 1077, "object_str": 1078, "problem": 1081, "prompt_info": 1082, "repair": 1083, "schema_path": 1085, "sever": 1086, "subject_info": 1090, "success": 1091, "suggested_modif": 1092, "suggested_pred": 1093, "time_check": 1094, "type_severity_map": 1096, "validation_configur": 1099, "validaton": 1100, "faq": [1101, 1102, 1103, 1104, 1105, 1106, 1107], "architectur": [1101, 1142], "what": [1101, 1102, 1104, 1106, 1111, 1128], "i": [1101, 1102, 1103, 1104, 1106, 1107, 1111, 1119, 1128], "an": [1101, 1102, 1106, 1111, 1126, 1128, 1137], "interfac": [1101, 1107, 1128, 1134, 1142, 1166, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1179, 1180, 1183, 1184], "iter": [1101, 1143], "why": [1101, 1102, 1104, 1107, 1111], "doe": [1101, 1102, 1104], "them": [1101, 1106], "so": 1101, "much": 1101, "do": [1102, 1103, 1104, 1106, 1107], "get": [1102, 1107, 1131], "help": [1102, 1104], "more": [1102, 1114, 1119, 1128], "want": [1102, 1107, 1111], "pass": 1102, "option": [1102, 1107], "error": [1102, 1107], "when": 1102, "p": 1102, "mean": 1102, "can": [1102, 1103, 1104], "entiti": [1102, 1112, 1117, 1120, 1195], "combin": [1102, 1196], "chain": [1102, 1131], "togeth": [1102, 1143], "unix": 1102, "style": 1102, "symbol": 1102, "visual": [1102, 1131, 1135], "subgraph": 1102, "over": [1102, 1104], "arch": 1102, "philosophi": 1102, "principl": 1102, "The": [1102, 1113, 1115], "isn": 1102, "t": [1102, 1104, 1107], "work": [1102, 1126, 1131, 1135, 1136, 1187, 1191], "wai": 1102, "expect": 1102, "stai": 1103, "involv": 1103, "ar": 1104, "tutori": [1104, 1130], "runnabl": 1104, "am": 1104, "familiar": 1104, "both": 1104, "python": [1104, 1116, 1132, 1137, 1139], "where": [1104, 1119], "should": [1104, 1117, 1119], "start": [1104, 1131], "find": 1104, "confus": 1104, "guid": [1104, 1113, 1122], "me": 1104, "call": [1104, 1143], "instal": [1104, 1125, 1126, 1131, 1132, 1135], "don": [1104, 1107], "know": 1104, "just": 1104, "bio": 1104, "access": [1104, 1106, 1111, 1129], "portal": [1104, 1195], "matport": 1104, "bioport": [1104, 1107, 1131, 1151, 1185], "triplestor": [1104, 1133], "ontobe": [1104, 1131, 1158, 1185], "ubergraph": [1104, 1120, 1131, 1133, 1166], "local": [1104, 1131], "file": [1104, 1107, 1121, 1131, 1137, 1138, 1161], "obo": [1104, 1106, 1107, 1109, 1115, 1126, 1131, 1138, 1145, 1146, 1147, 1148, 1149, 1156, 1161, 1163], "support": [1104, 1110], "owl": [1104, 1106, 1107, 1115, 1136, 1142, 1149, 1176, 1195], "reason": [1104, 1115, 1119], "we": 1106, "need": 1106, "now": 1106, "have": 1106, "chatgpt": 1106, "": 1106, "troubleshoot": 1107, "No": 1107, "messag": 1107, "api": [1107, 1151], "kei": [1107, 1151], "my": 1107, "won": 1107, "pars": 1107, "take": 1107, "too": 1107, "long": 1107, "load": 1107, "sqlite": [1107, 1126, 1137, 1185], "out": 1107, "method": 1107, "glossari": 1108, "case": [1109, 1118], "mine": 1109, "nlp": 1109, "differ": [1109, 1171], "commun": 1109, "approach": [1109, 1120, 1195], "repres": 1109, "represent": 1109, "simpl": [1109, 1163], "core": [1109, 1111], "hpo": 1109, "basic": [1109, 1111, 1131, 1132, 1133, 1139, 1162, 1169], "full": 1109, "curat": 1110, "background": [1110, 1120], "select": [1110, 1125], "further": [1110, 1112, 1115, 1116, 1117, 1118, 1120], "read": [1110, 1112, 1115, 1116, 1117, 1118, 1120], "would": 1111, "one": [1111, 1128], "standard": [1111, 1117], "prefixmap": [1112, 1195], "non": 1112, "default": [1112, 1120], "structur": 1112, "learn": 1114, "genu": 1115, "differentia": 1115, "form": 1115, "uberon": [1115, 1116], "nail": 1115, "analyz": 1115, "refer": 1116, "In": 1116, "look": [1117, 1118], "up": [1117, 1118], "convent": 1117, "signatur": 1117, "accompani": 1117, "provid": [1117, 1168, 1174], "addit": 1117, "context": 1117, "human": 1117, "machin": 1117, "merg": 1117, "primari": 1118, "custom": 1118, "multilingu": 1118, "other": [1118, 1131, 1137, 1142], "explor": 1119, "relat": [1119, 1178], "strategi": 1119, "entail": 1119, "yield": 1119, "than": 1119, "which": 1119, "A": 1119, "comput": 1120, "between": [1120, 1195], "jaccard": 1120, "aggreg": [1120, 1150], "measur": 1120, "compar": 1120, "vector": 1120, "base": 1120, "semsimian": 1120, "fhir": [1121, 1147], "convers": 1121, "cli": 1121, "config": 1121, "To": 1122, "larg": 1125, "llm": [1125, 1155], "framework": 1125, "ontogpt": 1125, "curategpt": 1125, "talisman": 1125, "conjunct": 1125, "exist": 1125, "tool": 1125, "suggest": 1125, "altern": [1125, 1126], "mixtral": 1125, "ollama": 1125, "litellm": 1125, "groq": 1125, "step": [1126, 1131], "1": [1126, 1131], "obtain": 1126, "2": [1126, 1132], "oaklib": [1126, 1186, 1187, 1188, 1189, 1190, 1191, 1192, 1193], "3": [1126, 1133], "individu": 1126, "caveat": 1126, "your": [1126, 1137], "own": [1126, 1137], "thi": [1126, 1135], "analysi": 1126, "discuss": 1128, "tracker": 1128, "project": [1128, 1132], "selector": [1128, 1161, 1185], "kit": 1129, "indic": 1129, "part": [1131, 1132, 1133, 1134, 1135, 1136, 1137, 1138], "from": [1131, 1145], "run": 1131, "librari": [1131, 1167], "introduct": [1131, 1139], "fetch": [1131, 1137], "abbrevi": 1131, "advanc": 1131, "paramet": 1131, "backend": [1131, 1133], "ontoport": 1131, "ol": [1131, 1157, 1185], "next": 1131, "poetri": 1132, "first": 1132, "extend": 1132, "connect": [1133, 1166], "oper": [1133, 1162], "4": 1134, "5": 1135, "graphviz": 1135, "obographviz": 1135, "programmat": 1135, "6": 1136, "With": [1136, 1137], "owlinterfac": 1136, "robot": [1136, 1162], "7": 1137, "download": 1137, "readi": 1137, "made": 1137, "build": 1137, "docker": 1137, "without": 1137, "rdbmss": 1137, "orm": [1137, 1165], "8": 1138, "chang": 1138, "about": [1138, 1156, 1159, 1161, 1163, 1166, 1195], "sqlite3": 1138, "jupyt": 1141, "partial": 1142, "complet": 1142, "best": 1143, "practic": 1143, "extern": 1143, "servic": [1143, 1157], "weav": 1143, "chunk": 1143, "abstract": 1144, "convert": [1145, 1146, 1147, 1148, 1149], "cx": 1146, "gilda": 1153, "initi": [1156, 1161, 1163, 1165], "lookup": 1157, "owleri": 1159, "pantherdb": 1160, "pronto": [1161, 1185], "templat": 1162, "sparql": 1164, "sql": 1165, "databas": 1165, "alchemi": 1165, "calcul": 1170, "dumper": 1172, "patcher": 1177, "scheme": 1185, "prontolib": 1185, "obosqlit": 1185, "apikey_manag": 1186, "networkx_bridg": 1187, "networkx": 1187, "relationship_walk": 1188, "lexical_index": 1189, "obograph_util": 1190, "slimmer_util": 1191, "slim": 1191, "table_fil": 1192, "layer": 1195, "rdf": 1195, "challeng": 1195}, "envversion": {"sphinx.domains.c": 3, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 9, "sphinx.domains.index": 1, "sphinx.domains.javascript": 3, "sphinx.domains.math": 2, "sphinx.domains.python": 4, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx.ext.viewcode": 1, "sphinx.ext.todo": 2, "sphinx.ext.intersphinx": 1, "sphinx": 60}, "alltitles": {"Command Line": [[0, "command-line"], [1138, "command-line"], [1143, "command-line"], [1158, "command-line"], [1179, "command-line"]], "General Guidelines": [[0, "general-guidelines"]], "Common Patterns": [[0, "common-patterns"]], "Term Lists": [[0, "term-lists"]], "Predicates": [[0, "predicates"]], "Commands": [[0, "commands"], [1134, "commands"]], "runoak": [[0, "runoak"]], "aliases": [[0, "runoak-aliases"]], "Example:": [[0, "example"], [0, "id1"], [0, "id2"], [0, "id3"], [0, "id4"], [0, "id5"], [0, "id6"], [0, "id7"], [0, "id8"], [0, "id9"], [0, "id10"], [0, "id11"], [0, "id12"], [0, "id13"], [0, "id14"], [0, "id15"], [0, "id16"], [0, "id17"], [0, "id18"], [0, "id19"], [0, "id20"], [0, "id21"], [0, "id22"], [0, "id23"], [0, "id24"], [0, "id25"], [0, "id26"], [0, "id27"], [0, "id28"], [0, "id29"], [0, "id30"], [0, "id31"], [0, "id32"], [0, "id33"], [0, "id34"], [0, "id35"], [0, "id36"], [0, "id37"], [0, "id38"], [0, "id39"], [0, "id40"], [0, "id41"], [0, "id42"], [0, "id43"], [0, "id44"], [0, "id45"], [0, "id46"], [0, "id47"], [0, "id48"], [0, "id49"], [0, "id50"], [0, "id51"], [0, "id52"], [0, "id53"], [0, "id54"], [0, "id55"], [0, "id56"], [0, "id57"], [0, "id58"], [0, "id59"], [0, "id60"], [0, "id61"], [0, "id62"], [0, "id63"], [0, "id64"], [0, "id65"], [0, "id66"], [0, "id67"], [0, "id68"], [0, "id71"], [0, "id72"], [0, "id73"], [0, "id74"], [0, "id75"], [0, "id76"], [0, "id77"], [0, "id78"], [0, "id79"], [0, "id80"], [0, "id81"], [0, "id82"], [0, "id83"], [0, "id84"], [0, "id85"], [0, "id86"], [0, "id87"], [0, "id88"], [0, "id89"], [0, "id90"], [0, "id91"], [0, "id92"], [0, "id93"], [0, "id94"], [0, "id95"], [0, "id96"], [0, "id97"], [0, "id98"], [0, "id99"], [0, "id100"], [0, "id101"], [0, "id102"], [0, "id103"], [0, "id106"], [0, "id107"], [0, "id108"], [0, "id109"], [0, "id110"], [1169, "example"], [1169, "id2"], [1169, "id3"], [1169, "id4"], [1185, "example"]], "ancestors": [[0, "runoak-ancestors"]], "annotate": [[0, "runoak-annotate"]], "apply": [[0, "runoak-apply"]], "Warning:": [[0, "warning"]], "apply-obsolete": [[0, "runoak-apply-obsolete"]], "apply-taxon-constraints": [[0, "runoak-apply-taxon-constraints"]], "associations": [[0, "runoak-associations"]], "associations-counts": [[0, "runoak-associations-counts"]], "associations-matrix": [[0, "runoak-associations-matrix"]], "axioms": [[0, "runoak-axioms"]], "cache-clear": [[0, "runoak-cache-clear"]], "cache-ls": [[0, "runoak-cache-ls"]], "definitions": [[0, "runoak-definitions"]], "descendants": [[0, "runoak-descendants"]], "diff": [[0, "runoak-diff"]], "diff-associations": [[0, "runoak-diff-associations"]], "diff-terms": [[0, "runoak-diff-terms"]], "diff-via-mappings": [[0, "runoak-diff-via-mappings"]], "disjoints": [[0, "runoak-disjoints"]], "dump": [[0, "runoak-dump"]], "enrichment": [[0, "runoak-enrichment"]], "expand-subsets": [[0, "runoak-expand-subsets"]], "extract": [[0, "runoak-extract"]], "fill-table": [[0, "runoak-fill-table"]], "generate-definitions": [[0, "runoak-generate-definitions"]], "generate-disjoints": [[0, "runoak-generate-disjoints"]], "generate-logical-definitions": [[0, "runoak-generate-logical-definitions"]], "generate-synonyms": [[0, "runoak-generate-synonyms"]], "info": [[0, "runoak-info"]], "information-content": [[0, "runoak-information-content"]], "labels": [[0, "runoak-labels"]], "languages": [[0, "runoak-languages"]], "leafs": [[0, "runoak-leafs"]], "lexmatch": [[0, "runoak-lexmatch"]], "Examples": [[0, "examples"], [234, "examples"], [247, "examples"], [1161, "examples"], [1177, "examples"], [1185, "examples"]], "lint": [[0, "runoak-lint"]], "logical-definitions": [[0, "runoak-logical-definitions"]], "mappings": [[0, "runoak-mappings"]], "migrate-curies": [[0, "runoak-migrate-curies"]], "normalize": [[0, "runoak-normalize"]], "obsoletes": [[0, "runoak-obsoletes"]], "ontologies": [[0, "runoak-ontologies"]], "ontology-metadata": [[0, "runoak-ontology-metadata"]], "ontology-versions": [[0, "runoak-ontology-versions"]], "paths": [[0, "runoak-paths"]], "prefixes": [[0, "runoak-prefixes"]], "query": [[0, "runoak-query"]], "relationships": [[0, "runoak-relationships"]], "rollup": [[0, "runoak-rollup"]], "roots": [[0, "runoak-roots"]], "search": [[0, "runoak-search"]], "set-apikey": [[0, "runoak-set-apikey"]], "siblings": [[0, "runoak-siblings"]], "similarity": [[0, "runoak-similarity"]], "similarity-pair": [[0, "runoak-similarity-pair"]], "singletons": [[0, "runoak-singletons"]], "statistics": [[0, "runoak-statistics"]], "subsets": [[0, "runoak-subsets"]], "See Also:": [[0, "see-also"]], "synonymize": [[0, "runoak-synonymize"]], "taxon-constraints": [[0, "runoak-taxon-constraints"], [969, "taxon-constraints"]], "term-categories": [[0, "runoak-term-categories"]], "term-metadata": [[0, "runoak-term-metadata"]], "term-subsets": [[0, "runoak-term-subsets"]], "terms": [[0, "runoak-terms"]], "termset-similarity": [[0, "runoak-termset-similarity"]], "transform": [[0, "runoak-transform"]], "tree": [[0, "runoak-tree"]], "validate": [[0, "runoak-validate"]], "validate-definitions": [[0, "runoak-validate-definitions"]], "Notes:": [[0, "notes"]], "validate-mappings": [[0, "runoak-validate-mappings"]], "validate-multiple": [[0, "runoak-validate-multiple"]], "viz": [[0, "runoak-viz"]], "Ontology Concepts": [[1, "ontology-concepts"]], "Ontology": [[1, "ontology"]], "Ontology Element": [[1, "ontology-element"]], "Imports and Ontologies within Ontologies": [[1, "imports-and-ontologies-within-ontologies"]], "URIs and CURIEs and identifiers": [[1, "uris-and-curies-and-identifiers"]], "Prefix Maps": [[1, "prefix-maps"]], "Relationships / Edges": [[1, "relationships-edges"]], "Mappings": [[1, "mappings"], [3, "mappings"], [4, "mappings"], [17, "mappings"], [20, "mappings"], [21, "mappings"], [22, "mappings"], [23, "mappings"], [24, "mappings"], [94, "mappings"], [95, "mappings"], [96, "mappings"], [155, "mappings"], [159, "mappings"], [214, "mappings"], [215, "mappings"], [219, "mappings"], [225, "mappings"], [251, "mappings"], [252, "mappings"], [264, "mappings"], [265, "mappings"], [266, "mappings"], [267, "mappings"], [271, "mappings"], [296, "mappings"], [297, "mappings"], [309, "mappings"], [310, "mappings"], [311, "mappings"], [312, "mappings"], [313, "mappings"], [314, "mappings"], [318, "mappings"], [319, "mappings"], [320, "mappings"], [323, "mappings"], [324, "mappings"], [374, "mappings"], [375, "mappings"], [382, "mappings"], [383, "mappings"], [384, "mappings"], [386, "mappings"], [387, "mappings"], [388, "mappings"], [390, "mappings"], [391, "mappings"], [395, "mappings"], [396, "mappings"], [398, "mappings"], [404, "mappings"], [405, "mappings"], [407, "mappings"], [412, "mappings"], [413, "mappings"], [414, "mappings"], [419, "mappings"], [478, "mappings"], [481, "mappings"], [482, "mappings"], [483, "mappings"], [484, "mappings"], [485, "mappings"], [486, "mappings"], [487, "mappings"], [490, "mappings"], [491, "mappings"], [499, "mappings"], [504, "mappings"], [505, "mappings"], [506, "mappings"], [507, "mappings"], [508, "mappings"], [509, "mappings"], [510, "mappings"], [511, "mappings"], [514, "mappings"], [523, "mappings"], [524, "mappings"], [528, "mappings"], [532, "mappings"], [534, "mappings"], [535, "mappings"], [537, "mappings"], [538, "mappings"], [539, "mappings"], [542, "mappings"], [543, "mappings"], [544, "mappings"], [547, "mappings"], [679, "mappings"], [694, "mappings"], [695, "mappings"], [697, "mappings"], [698, "mappings"], [745, "mappings"], [763, "mappings"], [766, "mappings"], [767, "mappings"], [768, "mappings"], [815, "mappings"], [817, "mappings"], [818, "mappings"], [819, "mappings"], [826, "mappings"], [827, "mappings"], [829, "mappings"], [830, "mappings"], [837, "mappings"], [840, "mappings"], [841, "mappings"], [842, "mappings"], [844, "mappings"], [938, "mappings"], [941, "mappings"], [942, "mappings"], [943, "mappings"], [944, "mappings"], [980, "mappings"], [990, "mappings"], [991, "mappings"], [992, "mappings"], [993, "mappings"], [1030, "mappings"], [1037, "mappings"], [1042, "mappings"], [1043, "mappings"], [1045, "mappings"], [1048, "mappings"], [1049, "mappings"], [1050, "mappings"], [1051, "mappings"], [1052, "mappings"], [1057, "mappings"], [1060, "mappings"], [1061, "mappings"], [1062, "mappings"], [1151, "mappings"]], "Ontology Format": [[1, "ontology-format"]], "Statements and Axioms": [[1, "statements-and-axioms"]], "Subsets": [[1, "subsets"], [46, "subsets"], [127, "subsets"], [165, "subsets"], [236, "subsets"], [281, "subsets"], [333, "subsets"], [439, "subsets"], [615, "subsets"], [719, "subsets"], [782, "subsets"], [884, "subsets"], [955, "subsets"], [1003, "subsets"], [1069, "subsets"]], "Labels/Names": [[1, "labels-names"]], "Contribution Guidelines": [[2, "contribution-guidelines"]], "Reporting issues and giving general feedback": [[2, "reporting-issues-and-giving-general-feedback"]], "Contributing documentation": [[2, "contributing-documentation"]], "Contributing code": [[2, "contributing-code"]], "Understand design patterns used": [[2, "understand-design-patterns-used"]], "Please make a Pull Request for all contributions.": [[2, "please-make-a-pull-request-for-all-contributions"]], "Always write tests": [[2, "always-write-tests"]], "How to contribute a plugin": [[2, "how-to-contribute-a-plugin"]], "How to contribute a new subcommand": [[2, "how-to-contribute-a-new-subcommand"]], "How to contribute to a notebook or add a new notebook": [[2, "how-to-contribute-to-a-notebook-or-add-a-new-notebook"]], "How to contribute a new adapter/implementation": [[2, "how-to-contribute-a-new-adapter-implementation"]], "How to contribute a new utility function": [[2, "how-to-contribute-a-new-utility-function"]], "How to contribute a datamodel": [[2, "how-to-contribute-a-datamodel"]], "Release to PyPI": [[2, "release-to-pypi"], [1128, "release-to-pypi"]], "Class: Association": [[3, "class-association"]], "Inheritance": [[3, "inheritance"], [17, "inheritance"], [22, "inheritance"], [39, "inheritance"], [40, "inheritance"], [47, "inheritance"], [48, "inheritance"], [49, "inheritance"], [50, "inheritance"], [51, "inheritance"], [52, "inheritance"], [54, "inheritance"], [55, "inheritance"], [56, "inheritance"], [61, "inheritance"], [62, "inheritance"], [64, "inheritance"], [68, "inheritance"], [69, "inheritance"], [70, "inheritance"], [71, "inheritance"], [72, "inheritance"], [76, "inheritance"], [77, "inheritance"], [82, "inheritance"], [83, "inheritance"], [89, "inheritance"], [168, "inheritance"], [169, "inheritance"], [170, "inheritance"], [172, "inheritance"], [173, "inheritance"], [175, "inheritance"], [177, "inheritance"], [178, "inheritance"], [179, "inheritance"], [183, "inheritance"], [187, "inheritance"], [188, "inheritance"], [190, "inheritance"], [191, "inheritance"], [193, "inheritance"], [195, "inheritance"], [196, "inheritance"], [198, "inheritance"], [201, "inheritance"], [251, "inheritance"], [266, "inheritance"], [267, "inheritance"], [296, "inheritance"], [311, "inheritance"], [312, "inheritance"], [374, "inheritance"], [375, "inheritance"], [382, "inheritance"], [383, "inheritance"], [384, "inheritance"], [387, "inheritance"], [395, "inheritance"], [405, "inheritance"], [407, "inheritance"], [413, "inheritance"], [419, "inheritance"], [478, "inheritance"], [482, "inheritance"], [483, "inheritance"], [484, "inheritance"], [485, "inheritance"], [490, "inheritance"], [491, "inheritance"], [499, "inheritance"], [504, "inheritance"], [505, "inheritance"], [506, "inheritance"], [507, "inheritance"], [508, "inheritance"], [509, "inheritance"], [510, "inheritance"], [511, "inheritance"], [512, "inheritance"], [513, "inheritance"], [514, "inheritance"], [523, "inheritance"], [524, "inheritance"], [529, "inheritance"], [532, "inheritance"], [535, "inheritance"], [537, "inheritance"], [538, "inheritance"], [539, "inheritance"], [542, "inheritance"], [543, "inheritance"], [544, "inheritance"], [547, "inheritance"], [551, "inheritance"], [552, "inheritance"], [553, "inheritance"], [554, "inheritance"], [555, "inheritance"], [557, "inheritance"], [558, "inheritance"], [559, "inheritance"], [560, "inheritance"], [561, "inheritance"], [562, "inheritance"], [563, "inheritance"], [564, "inheritance"], [565, "inheritance"], [566, "inheritance"], [567, "inheritance"], [568, "inheritance"], [569, "inheritance"], [570, "inheritance"], [571, "inheritance"], [572, "inheritance"], [573, "inheritance"], [574, "inheritance"], [575, "inheritance"], [576, "inheritance"], [577, "inheritance"], [578, "inheritance"], [579, "inheritance"], [580, "inheritance"], [581, "inheritance"], [582, "inheritance"], [583, "inheritance"], [584, "inheritance"], [585, "inheritance"], [586, "inheritance"], [587, "inheritance"], [588, "inheritance"], [590, "inheritance"], [591, "inheritance"], [592, "inheritance"], [593, "inheritance"], [594, "inheritance"], [595, "inheritance"], [597, "inheritance"], [598, "inheritance"], [599, "inheritance"], [600, "inheritance"], [601, "inheritance"], [602, "inheritance"], [603, "inheritance"], [605, "inheritance"], [606, "inheritance"], [610, "inheritance"], [611, "inheritance"], [612, "inheritance"], [616, "inheritance"], [617, "inheritance"], [618, "inheritance"], [627, "inheritance"], [628, "inheritance"], [629, "inheritance"], [630, "inheritance"], [631, "inheritance"], [633, "inheritance"], [634, "inheritance"], [635, "inheritance"], [636, "inheritance"], [637, "inheritance"], [643, "inheritance"], [645, "inheritance"], [646, "inheritance"], [647, "inheritance"], [648, "inheritance"], [649, "inheritance"], [651, "inheritance"], [652, "inheritance"], [653, "inheritance"], [654, "inheritance"], [655, "inheritance"], [656, "inheritance"], [658, "inheritance"], [660, "inheritance"], [661, "inheritance"], [662, "inheritance"], [663, "inheritance"], [664, "inheritance"], [666, "inheritance"], [667, "inheritance"], [668, "inheritance"], [670, "inheritance"], [672, "inheritance"], [674, "inheritance"], [675, "inheritance"], [676, "inheritance"], [763, "inheritance"], [767, "inheritance"], [768, "inheritance"], [774, "inheritance"], [779, "inheritance"], [780, "inheritance"], [783, "inheritance"], [784, "inheritance"], [785, "inheritance"], [796, "inheritance"], [800, "inheritance"], [801, "inheritance"], [802, "inheritance"], [806, "inheritance"], [810, "inheritance"], [811, "inheritance"], [813, "inheritance"], [826, "inheritance"], [829, "inheritance"], [830, "inheritance"], [840, "inheritance"], [842, "inheritance"], [844, "inheritance"], [849, "inheritance"], [850, "inheritance"], [851, "inheritance"], [857, "inheritance"], [860, "inheritance"], [861, "inheritance"], [862, "inheritance"], [863, "inheritance"], [869, "inheritance"], [870, "inheritance"], [871, "inheritance"], [872, "inheritance"], [875, "inheritance"], [879, "inheritance"], [880, "inheritance"], [885, "inheritance"], [888, "inheritance"], [892, "inheritance"], [894, "inheritance"], [895, "inheritance"], [896, "inheritance"], [898, "inheritance"], [900, "inheritance"], [901, "inheritance"], [905, "inheritance"], [907, "inheritance"], [910, "inheritance"], [911, "inheritance"], [913, "inheritance"], [917, "inheritance"], [918, "inheritance"], [938, "inheritance"], [941, "inheritance"], [942, "inheritance"], [944, "inheritance"], [990, "inheritance"], [1030, "inheritance"], [1037, "inheritance"], [1042, "inheritance"], [1043, "inheritance"], [1045, "inheritance"], [1049, "inheritance"], [1050, "inheritance"], [1051, "inheritance"], [1052, "inheritance"], [1061, "inheritance"], [1062, "inheritance"]], "Slots": [[3, "slots"], [4, "slots"], [17, "slots"], [20, "slots"], [21, "slots"], [22, "slots"], [23, "slots"], [24, "slots"], [46, "slots"], [94, "slots"], [95, "slots"], [96, "slots"], [127, "slots"], [142, "slots"], [150, "slots"], [155, "slots"], [159, "slots"], [165, "slots"], [214, "slots"], [215, "slots"], [216, "slots"], [219, "slots"], [225, "slots"], [236, "slots"], [251, "slots"], [252, "slots"], [264, "slots"], [265, "slots"], [266, "slots"], [267, "slots"], [271, "slots"], [275, "slots"], [281, "slots"], [296, "slots"], [297, "slots"], [309, "slots"], [310, "slots"], [311, "slots"], [312, "slots"], [313, "slots"], [314, "slots"], [318, "slots"], [319, "slots"], [320, "slots"], [323, "slots"], [324, "slots"], [326, "slots"], [333, "slots"], [374, "slots"], [375, "slots"], [382, "slots"], [383, "slots"], [384, "slots"], [386, "slots"], [387, "slots"], [388, "slots"], [390, "slots"], [391, "slots"], [395, "slots"], [396, "slots"], [398, "slots"], [404, "slots"], [405, "slots"], [406, "slots"], [407, "slots"], [408, "slots"], [412, "slots"], [413, "slots"], [414, "slots"], [419, "slots"], [439, "slots"], [478, "slots"], [481, "slots"], [482, "slots"], [483, "slots"], [484, "slots"], [485, "slots"], [486, "slots"], [487, "slots"], [490, "slots"], [491, "slots"], [499, "slots"], [504, "slots"], [505, "slots"], [506, "slots"], [507, "slots"], [508, "slots"], [509, "slots"], [510, "slots"], [511, "slots"], [514, "slots"], [523, "slots"], [524, "slots"], [528, "slots"], [532, "slots"], [534, "slots"], [535, "slots"], [537, "slots"], [538, "slots"], [539, "slots"], [542, "slots"], [543, "slots"], [544, "slots"], [547, "slots"], [615, "slots"], [679, "slots"], [687, "slots"], [694, "slots"], [695, "slots"], [696, "slots"], [697, "slots"], [698, "slots"], [700, "slots"], [719, "slots"], [745, "slots"], [763, "slots"], [766, "slots"], [767, "slots"], [768, "slots"], [782, "slots"], [815, "slots"], [817, "slots"], [818, "slots"], [819, "slots"], [826, "slots"], [827, "slots"], [829, "slots"], [830, "slots"], [837, "slots"], [840, "slots"], [841, "slots"], [842, "slots"], [844, "slots"], [884, "slots"], [938, "slots"], [941, "slots"], [942, "slots"], [943, "slots"], [944, "slots"], [955, "slots"], [980, "slots"], [990, "slots"], [991, "slots"], [992, "slots"], [993, "slots"], [1003, "slots"], [1030, "slots"], [1037, "slots"], [1042, "slots"], [1043, "slots"], [1045, "slots"], [1048, "slots"], [1049, "slots"], [1050, "slots"], [1051, "slots"], [1052, "slots"], [1053, "slots"], [1057, "slots"], [1060, "slots"], [1061, "slots"], [1062, "slots"], [1069, "slots"]], "Usages": [[3, "usages"], [23, "usages"], [24, "usages"], [95, "usages"], [155, "usages"], [214, "usages"], [219, "usages"], [225, "usages"], [252, "usages"], [264, "usages"], [266, "usages"], [267, "usages"], [271, "usages"], [297, "usages"], [309, "usages"], [311, "usages"], [312, "usages"], [313, "usages"], [318, "usages"], [319, "usages"], [320, "usages"], [323, "usages"], [324, "usages"], [375, "usages"], [382, "usages"], [384, "usages"], [386, "usages"], [387, "usages"], [388, "usages"], [390, "usages"], [395, "usages"], [396, "usages"], [398, "usages"], [404, "usages"], [405, "usages"], [412, "usages"], [413, "usages"], [414, "usages"], [419, "usages"], [478, "usages"], [481, "usages"], [482, "usages"], [486, "usages"], [490, "usages"], [491, "usages"], [514, "usages"], [523, "usages"], [524, "usages"], [528, "usages"], [534, "usages"], [535, "usages"], [537, "usages"], [538, "usages"], [542, "usages"], [544, "usages"], [679, "usages"], [695, "usages"], [697, "usages"], [745, "usages"], [766, "usages"], [767, "usages"], [815, "usages"], [817, "usages"], [819, "usages"], [826, "usages"], [827, "usages"], [829, "usages"], [837, "usages"], [840, "usages"], [841, "usages"], [844, "usages"], [938, "usages"], [941, "usages"], [942, "usages"], [943, "usages"], [990, "usages"], [993, "usages"], [1030, "usages"], [1045, "usages"], [1049, "usages"], [1052, "usages"], [1057, "usages"], [1060, "usages"], [1062, "usages"]], "Identifier and Mapping Information": [[3, "identifier-and-mapping-information"], [4, "identifier-and-mapping-information"], [5, "identifier-and-mapping-information"], [6, "identifier-and-mapping-information"], [7, "identifier-and-mapping-information"], [8, "identifier-and-mapping-information"], [9, "identifier-and-mapping-information"], [10, "identifier-and-mapping-information"], [11, "identifier-and-mapping-information"], [12, "identifier-and-mapping-information"], [13, "identifier-and-mapping-information"], [14, "identifier-and-mapping-information"], [15, "identifier-and-mapping-information"], [16, "identifier-and-mapping-information"], [17, "identifier-and-mapping-information"], [18, "identifier-and-mapping-information"], [19, "identifier-and-mapping-information"], [20, "identifier-and-mapping-information"], [21, "identifier-and-mapping-information"], [22, "identifier-and-mapping-information"], [23, "identifier-and-mapping-information"], [24, "identifier-and-mapping-information"], [25, "identifier-and-mapping-information"], [26, "identifier-and-mapping-information"], [27, "identifier-and-mapping-information"], [28, "identifier-and-mapping-information"], [29, "identifier-and-mapping-information"], [30, "identifier-and-mapping-information"], [32, "identifier-and-mapping-information"], [33, "identifier-and-mapping-information"], [34, "identifier-and-mapping-information"], [35, "identifier-and-mapping-information"], [36, "identifier-and-mapping-information"], [37, "identifier-and-mapping-information"], [38, "identifier-and-mapping-information"], [39, "identifier-and-mapping-information"], [40, "identifier-and-mapping-information"], [41, "identifier-and-mapping-information"], [42, "identifier-and-mapping-information"], [43, "identifier-and-mapping-information"], [44, "identifier-and-mapping-information"], [45, "identifier-and-mapping-information"], [47, "identifier-and-mapping-information"], [48, "identifier-and-mapping-information"], [49, "identifier-and-mapping-information"], [50, "identifier-and-mapping-information"], [51, "identifier-and-mapping-information"], [52, "identifier-and-mapping-information"], [53, "identifier-and-mapping-information"], [54, "identifier-and-mapping-information"], [55, "identifier-and-mapping-information"], [56, "identifier-and-mapping-information"], [57, "identifier-and-mapping-information"], [58, "identifier-and-mapping-information"], [59, "identifier-and-mapping-information"], [60, "identifier-and-mapping-information"], [61, "identifier-and-mapping-information"], [62, "identifier-and-mapping-information"], [63, "identifier-and-mapping-information"], [64, "identifier-and-mapping-information"], [65, "identifier-and-mapping-information"], [66, "identifier-and-mapping-information"], [67, "identifier-and-mapping-information"], [68, "identifier-and-mapping-information"], [69, "identifier-and-mapping-information"], [70, "identifier-and-mapping-information"], [71, "identifier-and-mapping-information"], [72, "identifier-and-mapping-information"], [73, "identifier-and-mapping-information"], [74, "identifier-and-mapping-information"], [75, "identifier-and-mapping-information"], [76, "identifier-and-mapping-information"], [77, "identifier-and-mapping-information"], [78, "identifier-and-mapping-information"], [79, "identifier-and-mapping-information"], [80, "identifier-and-mapping-information"], [81, "identifier-and-mapping-information"], [82, "identifier-and-mapping-information"], [83, "identifier-and-mapping-information"], [84, "identifier-and-mapping-information"], [85, "identifier-and-mapping-information"], [86, "identifier-and-mapping-information"], [87, "identifier-and-mapping-information"], [88, "identifier-and-mapping-information"], [89, "identifier-and-mapping-information"], [90, "identifier-and-mapping-information"], [91, "identifier-and-mapping-information"], [92, "identifier-and-mapping-information"], [93, "identifier-and-mapping-information"], [94, "identifier-and-mapping-information"], [95, "identifier-and-mapping-information"], [96, "identifier-and-mapping-information"], [97, "identifier-and-mapping-information"], [98, "identifier-and-mapping-information"], [99, "identifier-and-mapping-information"], [100, "identifier-and-mapping-information"], [101, "identifier-and-mapping-information"], [102, "identifier-and-mapping-information"], [103, "identifier-and-mapping-information"], [104, "identifier-and-mapping-information"], [105, "identifier-and-mapping-information"], [106, "identifier-and-mapping-information"], [107, "identifier-and-mapping-information"], [108, "identifier-and-mapping-information"], [109, "identifier-and-mapping-information"], [110, "identifier-and-mapping-information"], [111, "identifier-and-mapping-information"], [112, "identifier-and-mapping-information"], [113, "identifier-and-mapping-information"], [114, "identifier-and-mapping-information"], [115, "identifier-and-mapping-information"], [116, "identifier-and-mapping-information"], [117, "identifier-and-mapping-information"], [118, "identifier-and-mapping-information"], [119, "identifier-and-mapping-information"], [121, "identifier-and-mapping-information"], [122, "identifier-and-mapping-information"], [123, "identifier-and-mapping-information"], [124, "identifier-and-mapping-information"], [125, "identifier-and-mapping-information"], [126, "identifier-and-mapping-information"], [128, "identifier-and-mapping-information"], [129, "identifier-and-mapping-information"], [130, "identifier-and-mapping-information"], [131, "identifier-and-mapping-information"], [132, "identifier-and-mapping-information"], [133, "identifier-and-mapping-information"], [134, "identifier-and-mapping-information"], [135, "identifier-and-mapping-information"], [136, "identifier-and-mapping-information"], [137, "identifier-and-mapping-information"], [138, "identifier-and-mapping-information"], [139, "identifier-and-mapping-information"], [140, "identifier-and-mapping-information"], [141, "identifier-and-mapping-information"], [142, "identifier-and-mapping-information"], [143, "identifier-and-mapping-information"], [144, "identifier-and-mapping-information"], [145, "identifier-and-mapping-information"], [146, "identifier-and-mapping-information"], [147, "identifier-and-mapping-information"], [148, "identifier-and-mapping-information"], [149, "identifier-and-mapping-information"], [150, "identifier-and-mapping-information"], [151, "identifier-and-mapping-information"], [152, "identifier-and-mapping-information"], [153, "identifier-and-mapping-information"], [154, "identifier-and-mapping-information"], [155, "identifier-and-mapping-information"], [156, "identifier-and-mapping-information"], [157, "identifier-and-mapping-information"], [158, "identifier-and-mapping-information"], [159, "identifier-and-mapping-information"], [160, "identifier-and-mapping-information"], [161, "identifier-and-mapping-information"], [162, "identifier-and-mapping-information"], [163, "identifier-and-mapping-information"], [166, "identifier-and-mapping-information"], [167, "identifier-and-mapping-information"], [168, "identifier-and-mapping-information"], [169, "identifier-and-mapping-information"], [170, "identifier-and-mapping-information"], [171, "identifier-and-mapping-information"], [172, "identifier-and-mapping-information"], [173, "identifier-and-mapping-information"], [174, "identifier-and-mapping-information"], [175, "identifier-and-mapping-information"], [176, "identifier-and-mapping-information"], [177, "identifier-and-mapping-information"], [178, "identifier-and-mapping-information"], [179, "identifier-and-mapping-information"], [180, "identifier-and-mapping-information"], [181, "identifier-and-mapping-information"], [182, "identifier-and-mapping-information"], [183, "identifier-and-mapping-information"], [184, "identifier-and-mapping-information"], [185, "identifier-and-mapping-information"], [186, "identifier-and-mapping-information"], [187, "identifier-and-mapping-information"], [188, "identifier-and-mapping-information"], [189, "identifier-and-mapping-information"], [190, "identifier-and-mapping-information"], [191, "identifier-and-mapping-information"], [192, "identifier-and-mapping-information"], [193, "identifier-and-mapping-information"], [194, "identifier-and-mapping-information"], [195, "identifier-and-mapping-information"], [196, "identifier-and-mapping-information"], [197, "identifier-and-mapping-information"], [198, "identifier-and-mapping-information"], [199, "identifier-and-mapping-information"], [200, "identifier-and-mapping-information"], [201, "identifier-and-mapping-information"], [205, "identifier-and-mapping-information"], [206, "identifier-and-mapping-information"], [207, "identifier-and-mapping-information"], [208, "identifier-and-mapping-information"], [209, "identifier-and-mapping-information"], [210, "identifier-and-mapping-information"], [211, "identifier-and-mapping-information"], [212, "identifier-and-mapping-information"], [213, "identifier-and-mapping-information"], [214, "identifier-and-mapping-information"], [215, "identifier-and-mapping-information"], [216, "identifier-and-mapping-information"], [217, "identifier-and-mapping-information"], [218, "identifier-and-mapping-information"], [219, "identifier-and-mapping-information"], [220, "identifier-and-mapping-information"], [221, "identifier-and-mapping-information"], [222, "identifier-and-mapping-information"], [223, "identifier-and-mapping-information"], [224, "identifier-and-mapping-information"], [225, "identifier-and-mapping-information"], [226, "identifier-and-mapping-information"], [227, "identifier-and-mapping-information"], [228, "identifier-and-mapping-information"], [229, "identifier-and-mapping-information"], [230, "identifier-and-mapping-information"], [231, "identifier-and-mapping-information"], [232, "identifier-and-mapping-information"], [233, "identifier-and-mapping-information"], [234, "identifier-and-mapping-information"], [235, "identifier-and-mapping-information"], [237, "identifier-and-mapping-information"], [239, "identifier-and-mapping-information"], [240, "identifier-and-mapping-information"], [241, "identifier-and-mapping-information"], [242, "identifier-and-mapping-information"], [243, "identifier-and-mapping-information"], [244, "identifier-and-mapping-information"], [245, "identifier-and-mapping-information"], [246, "identifier-and-mapping-information"], [247, "identifier-and-mapping-information"], [248, "identifier-and-mapping-information"], [249, "identifier-and-mapping-information"], [251, "identifier-and-mapping-information"], [252, "identifier-and-mapping-information"], [253, "identifier-and-mapping-information"], [254, "identifier-and-mapping-information"], [255, "identifier-and-mapping-information"], [256, "identifier-and-mapping-information"], [257, "identifier-and-mapping-information"], [258, "identifier-and-mapping-information"], [259, "identifier-and-mapping-information"], [260, "identifier-and-mapping-information"], [261, "identifier-and-mapping-information"], [262, "identifier-and-mapping-information"], [263, "identifier-and-mapping-information"], [264, "identifier-and-mapping-information"], [265, "identifier-and-mapping-information"], [266, "identifier-and-mapping-information"], [267, "identifier-and-mapping-information"], [268, "identifier-and-mapping-information"], [269, "identifier-and-mapping-information"], [270, "identifier-and-mapping-information"], [271, "identifier-and-mapping-information"], [272, "identifier-and-mapping-information"], [273, "identifier-and-mapping-information"], [274, "identifier-and-mapping-information"], [275, "identifier-and-mapping-information"], [276, "identifier-and-mapping-information"], [277, "identifier-and-mapping-information"], [278, "identifier-and-mapping-information"], [279, "identifier-and-mapping-information"], [280, "identifier-and-mapping-information"], [284, "identifier-and-mapping-information"], [285, "identifier-and-mapping-information"], [286, "identifier-and-mapping-information"], [287, "identifier-and-mapping-information"], [288, "identifier-and-mapping-information"], [289, "identifier-and-mapping-information"], [290, "identifier-and-mapping-information"], [291, "identifier-and-mapping-information"], [292, "identifier-and-mapping-information"], [293, "identifier-and-mapping-information"], [294, "identifier-and-mapping-information"], [296, "identifier-and-mapping-information"], [297, "identifier-and-mapping-information"], [298, "identifier-and-mapping-information"], [299, "identifier-and-mapping-information"], [300, "identifier-and-mapping-information"], [301, "identifier-and-mapping-information"], [302, "identifier-and-mapping-information"], [303, "identifier-and-mapping-information"], [304, "identifier-and-mapping-information"], [305, "identifier-and-mapping-information"], [306, "identifier-and-mapping-information"], [307, "identifier-and-mapping-information"], [308, "identifier-and-mapping-information"], [309, "identifier-and-mapping-information"], [310, "identifier-and-mapping-information"], [311, "identifier-and-mapping-information"], [312, "identifier-and-mapping-information"], [313, "identifier-and-mapping-information"], [314, "identifier-and-mapping-information"], [315, "identifier-and-mapping-information"], [316, "identifier-and-mapping-information"], [317, "identifier-and-mapping-information"], [318, "identifier-and-mapping-information"], [319, "identifier-and-mapping-information"], [320, "identifier-and-mapping-information"], [321, "identifier-and-mapping-information"], [322, "identifier-and-mapping-information"], [323, "identifier-and-mapping-information"], [324, "identifier-and-mapping-information"], [325, "identifier-and-mapping-information"], [326, "identifier-and-mapping-information"], [327, "identifier-and-mapping-information"], [328, "identifier-and-mapping-information"], [329, "identifier-and-mapping-information"], [330, "identifier-and-mapping-information"], [331, "identifier-and-mapping-information"], [332, "identifier-and-mapping-information"], [334, "identifier-and-mapping-information"], [339, "identifier-and-mapping-information"], [340, "identifier-and-mapping-information"], [341, "identifier-and-mapping-information"], [342, "identifier-and-mapping-information"], [343, "identifier-and-mapping-information"], [344, "identifier-and-mapping-information"], [345, "identifier-and-mapping-information"], [346, "identifier-and-mapping-information"], [347, "identifier-and-mapping-information"], [348, "identifier-and-mapping-information"], [349, "identifier-and-mapping-information"], [350, "identifier-and-mapping-information"], [351, "identifier-and-mapping-information"], [352, "identifier-and-mapping-information"], [353, "identifier-and-mapping-information"], [354, "identifier-and-mapping-information"], [355, "identifier-and-mapping-information"], [356, "identifier-and-mapping-information"], [357, "identifier-and-mapping-information"], [358, "identifier-and-mapping-information"], [359, "identifier-and-mapping-information"], [360, "identifier-and-mapping-information"], [361, "identifier-and-mapping-information"], [362, "identifier-and-mapping-information"], [363, "identifier-and-mapping-information"], [364, "identifier-and-mapping-information"], [365, "identifier-and-mapping-information"], [366, "identifier-and-mapping-information"], [367, "identifier-and-mapping-information"], [368, "identifier-and-mapping-information"], [369, "identifier-and-mapping-information"], [370, "identifier-and-mapping-information"], [371, "identifier-and-mapping-information"], [373, "identifier-and-mapping-information"], [374, "identifier-and-mapping-information"], [375, "identifier-and-mapping-information"], [376, "identifier-and-mapping-information"], [377, "identifier-and-mapping-information"], [378, "identifier-and-mapping-information"], [379, "identifier-and-mapping-information"], [380, "identifier-and-mapping-information"], [381, "identifier-and-mapping-information"], [382, "identifier-and-mapping-information"], [383, "identifier-and-mapping-information"], [384, "identifier-and-mapping-information"], [385, "identifier-and-mapping-information"], [386, "identifier-and-mapping-information"], [387, "identifier-and-mapping-information"], [388, "identifier-and-mapping-information"], [389, "identifier-and-mapping-information"], [390, "identifier-and-mapping-information"], [391, "identifier-and-mapping-information"], [392, "identifier-and-mapping-information"], [393, "identifier-and-mapping-information"], [394, "identifier-and-mapping-information"], [395, "identifier-and-mapping-information"], [396, "identifier-and-mapping-information"], [397, "identifier-and-mapping-information"], [398, "identifier-and-mapping-information"], [399, "identifier-and-mapping-information"], [400, "identifier-and-mapping-information"], [401, "identifier-and-mapping-information"], [402, "identifier-and-mapping-information"], [403, "identifier-and-mapping-information"], [404, "identifier-and-mapping-information"], [405, "identifier-and-mapping-information"], [406, "identifier-and-mapping-information"], [407, "identifier-and-mapping-information"], [408, "identifier-and-mapping-information"], [409, "identifier-and-mapping-information"], [410, "identifier-and-mapping-information"], [411, "identifier-and-mapping-information"], [412, "identifier-and-mapping-information"], [413, "identifier-and-mapping-information"], [414, "identifier-and-mapping-information"], [415, "identifier-and-mapping-information"], [416, "identifier-and-mapping-information"], [417, "identifier-and-mapping-information"], [418, "identifier-and-mapping-information"], [419, "identifier-and-mapping-information"], [420, "identifier-and-mapping-information"], [421, "identifier-and-mapping-information"], [422, "identifier-and-mapping-information"], [423, "identifier-and-mapping-information"], [424, "identifier-and-mapping-information"], [425, "identifier-and-mapping-information"], [426, "identifier-and-mapping-information"], [427, "identifier-and-mapping-information"], [428, "identifier-and-mapping-information"], [429, "identifier-and-mapping-information"], [430, "identifier-and-mapping-information"], [431, "identifier-and-mapping-information"], [432, "identifier-and-mapping-information"], [433, "identifier-and-mapping-information"], [434, "identifier-and-mapping-information"], [435, "identifier-and-mapping-information"], [436, "identifier-and-mapping-information"], [437, "identifier-and-mapping-information"], [438, "identifier-and-mapping-information"], [440, "identifier-and-mapping-information"], [441, "identifier-and-mapping-information"], [442, "identifier-and-mapping-information"], [443, "identifier-and-mapping-information"], [444, "identifier-and-mapping-information"], [445, "identifier-and-mapping-information"], [446, "identifier-and-mapping-information"], [447, "identifier-and-mapping-information"], [448, "identifier-and-mapping-information"], [449, "identifier-and-mapping-information"], [452, "identifier-and-mapping-information"], [453, "identifier-and-mapping-information"], [454, "identifier-and-mapping-information"], [455, "identifier-and-mapping-information"], [456, "identifier-and-mapping-information"], [457, "identifier-and-mapping-information"], [458, "identifier-and-mapping-information"], [459, "identifier-and-mapping-information"], [460, "identifier-and-mapping-information"], [461, "identifier-and-mapping-information"], [462, "identifier-and-mapping-information"], [463, "identifier-and-mapping-information"], [464, "identifier-and-mapping-information"], [465, "identifier-and-mapping-information"], [466, "identifier-and-mapping-information"], [467, "identifier-and-mapping-information"], [468, "identifier-and-mapping-information"], [469, "identifier-and-mapping-information"], [470, "identifier-and-mapping-information"], [472, "identifier-and-mapping-information"], [473, "identifier-and-mapping-information"], [474, "identifier-and-mapping-information"], [475, "identifier-and-mapping-information"], [476, "identifier-and-mapping-information"], [477, "identifier-and-mapping-information"], [478, "identifier-and-mapping-information"], [479, "identifier-and-mapping-information"], [480, "identifier-and-mapping-information"], [481, "identifier-and-mapping-information"], [482, "identifier-and-mapping-information"], [483, "identifier-and-mapping-information"], [484, "identifier-and-mapping-information"], [485, "identifier-and-mapping-information"], [486, "identifier-and-mapping-information"], [487, "identifier-and-mapping-information"], [488, "identifier-and-mapping-information"], [489, "identifier-and-mapping-information"], [490, "identifier-and-mapping-information"], [491, "identifier-and-mapping-information"], [492, "identifier-and-mapping-information"], [493, "identifier-and-mapping-information"], [494, "identifier-and-mapping-information"], [495, "identifier-and-mapping-information"], [496, "identifier-and-mapping-information"], [497, "identifier-and-mapping-information"], [498, "identifier-and-mapping-information"], [499, "identifier-and-mapping-information"], [500, "identifier-and-mapping-information"], [501, "identifier-and-mapping-information"], [502, "identifier-and-mapping-information"], [503, "identifier-and-mapping-information"], [504, "identifier-and-mapping-information"], [505, "identifier-and-mapping-information"], [506, "identifier-and-mapping-information"], [507, "identifier-and-mapping-information"], [508, "identifier-and-mapping-information"], [509, "identifier-and-mapping-information"], [510, "identifier-and-mapping-information"], [511, "identifier-and-mapping-information"], [512, "identifier-and-mapping-information"], [513, "identifier-and-mapping-information"], [514, "identifier-and-mapping-information"], [515, "identifier-and-mapping-information"], [516, "identifier-and-mapping-information"], [517, "identifier-and-mapping-information"], [518, "identifier-and-mapping-information"], [519, "identifier-and-mapping-information"], [520, "identifier-and-mapping-information"], [521, "identifier-and-mapping-information"], [522, "identifier-and-mapping-information"], [523, "identifier-and-mapping-information"], [524, "identifier-and-mapping-information"], [525, "identifier-and-mapping-information"], [526, "identifier-and-mapping-information"], [527, "identifier-and-mapping-information"], [528, "identifier-and-mapping-information"], [529, "identifier-and-mapping-information"], [530, "identifier-and-mapping-information"], [531, "identifier-and-mapping-information"], [532, "identifier-and-mapping-information"], [533, "identifier-and-mapping-information"], [534, "identifier-and-mapping-information"], [535, "identifier-and-mapping-information"], [537, "identifier-and-mapping-information"], [538, "identifier-and-mapping-information"], [539, "identifier-and-mapping-information"], [540, "identifier-and-mapping-information"], [541, "identifier-and-mapping-information"], [542, "identifier-and-mapping-information"], [543, "identifier-and-mapping-information"], [544, "identifier-and-mapping-information"], [545, "identifier-and-mapping-information"], [546, "identifier-and-mapping-information"], [547, "identifier-and-mapping-information"], [548, "identifier-and-mapping-information"], [549, "identifier-and-mapping-information"], [550, "identifier-and-mapping-information"], [551, "identifier-and-mapping-information"], [552, "identifier-and-mapping-information"], [553, "identifier-and-mapping-information"], [554, "identifier-and-mapping-information"], [555, "identifier-and-mapping-information"], [556, "identifier-and-mapping-information"], [557, "identifier-and-mapping-information"], [558, "identifier-and-mapping-information"], [559, "identifier-and-mapping-information"], [560, "identifier-and-mapping-information"], [561, "identifier-and-mapping-information"], [562, "identifier-and-mapping-information"], [563, "identifier-and-mapping-information"], [564, "identifier-and-mapping-information"], [565, "identifier-and-mapping-information"], [566, "identifier-and-mapping-information"], [567, "identifier-and-mapping-information"], [568, "identifier-and-mapping-information"], [569, "identifier-and-mapping-information"], [570, "identifier-and-mapping-information"], [571, "identifier-and-mapping-information"], [572, "identifier-and-mapping-information"], [573, "identifier-and-mapping-information"], [574, "identifier-and-mapping-information"], [575, "identifier-and-mapping-information"], [576, "identifier-and-mapping-information"], [577, "identifier-and-mapping-information"], [578, "identifier-and-mapping-information"], [579, "identifier-and-mapping-information"], [580, "identifier-and-mapping-information"], [581, "identifier-and-mapping-information"], [582, "identifier-and-mapping-information"], [583, "identifier-and-mapping-information"], [584, "identifier-and-mapping-information"], [585, "identifier-and-mapping-information"], [586, "identifier-and-mapping-information"], [587, "identifier-and-mapping-information"], [588, "identifier-and-mapping-information"], [589, "identifier-and-mapping-information"], [590, "identifier-and-mapping-information"], [591, "identifier-and-mapping-information"], [592, "identifier-and-mapping-information"], [593, "identifier-and-mapping-information"], [594, "identifier-and-mapping-information"], [595, "identifier-and-mapping-information"], [596, "identifier-and-mapping-information"], [597, "identifier-and-mapping-information"], [598, "identifier-and-mapping-information"], [599, "identifier-and-mapping-information"], [600, "identifier-and-mapping-information"], [601, "identifier-and-mapping-information"], [602, "identifier-and-mapping-information"], [603, "identifier-and-mapping-information"], [604, "identifier-and-mapping-information"], [605, "identifier-and-mapping-information"], [606, "identifier-and-mapping-information"], [607, "identifier-and-mapping-information"], [608, "identifier-and-mapping-information"], [609, "identifier-and-mapping-information"], [610, "identifier-and-mapping-information"], [611, "identifier-and-mapping-information"], [612, "identifier-and-mapping-information"], [613, "identifier-and-mapping-information"], [614, "identifier-and-mapping-information"], [616, "identifier-and-mapping-information"], [617, "identifier-and-mapping-information"], [618, "identifier-and-mapping-information"], [619, "identifier-and-mapping-information"], [620, "identifier-and-mapping-information"], [621, "identifier-and-mapping-information"], [622, "identifier-and-mapping-information"], [623, "identifier-and-mapping-information"], [624, "identifier-and-mapping-information"], [625, "identifier-and-mapping-information"], [626, "identifier-and-mapping-information"], [627, "identifier-and-mapping-information"], [628, "identifier-and-mapping-information"], [629, "identifier-and-mapping-information"], [630, "identifier-and-mapping-information"], [631, "identifier-and-mapping-information"], [632, "identifier-and-mapping-information"], [633, "identifier-and-mapping-information"], [634, "identifier-and-mapping-information"], [635, "identifier-and-mapping-information"], [636, "identifier-and-mapping-information"], [637, "identifier-and-mapping-information"], [638, "identifier-and-mapping-information"], [639, "identifier-and-mapping-information"], [640, "identifier-and-mapping-information"], [641, "identifier-and-mapping-information"], [642, "identifier-and-mapping-information"], [643, "identifier-and-mapping-information"], [645, "identifier-and-mapping-information"], [646, "identifier-and-mapping-information"], [647, "identifier-and-mapping-information"], [648, "identifier-and-mapping-information"], [649, "identifier-and-mapping-information"], [650, "identifier-and-mapping-information"], [651, "identifier-and-mapping-information"], [652, "identifier-and-mapping-information"], [653, "identifier-and-mapping-information"], [654, "identifier-and-mapping-information"], [655, "identifier-and-mapping-information"], [656, "identifier-and-mapping-information"], [657, "identifier-and-mapping-information"], [658, "identifier-and-mapping-information"], [659, "identifier-and-mapping-information"], [660, "identifier-and-mapping-information"], [661, "identifier-and-mapping-information"], [662, "identifier-and-mapping-information"], [663, "identifier-and-mapping-information"], [664, "identifier-and-mapping-information"], [665, "identifier-and-mapping-information"], [666, "identifier-and-mapping-information"], [667, "identifier-and-mapping-information"], [668, "identifier-and-mapping-information"], [669, "identifier-and-mapping-information"], [670, "identifier-and-mapping-information"], [672, "identifier-and-mapping-information"], [673, "identifier-and-mapping-information"], [674, "identifier-and-mapping-information"], [675, "identifier-and-mapping-information"], [676, "identifier-and-mapping-information"], [677, "identifier-and-mapping-information"], [678, "identifier-and-mapping-information"], [679, "identifier-and-mapping-information"], [680, "identifier-and-mapping-information"], [681, "identifier-and-mapping-information"], [682, "identifier-and-mapping-information"], [683, "identifier-and-mapping-information"], [684, "identifier-and-mapping-information"], [685, "identifier-and-mapping-information"], [686, "identifier-and-mapping-information"], [687, "identifier-and-mapping-information"], [688, "identifier-and-mapping-information"], [689, "identifier-and-mapping-information"], [690, "identifier-and-mapping-information"], [691, "identifier-and-mapping-information"], [692, "identifier-and-mapping-information"], [693, "identifier-and-mapping-information"], [694, "identifier-and-mapping-information"], [695, "identifier-and-mapping-information"], [696, "identifier-and-mapping-information"], [697, "identifier-and-mapping-information"], [698, "identifier-and-mapping-information"], [699, "identifier-and-mapping-information"], [700, "identifier-and-mapping-information"], [701, "identifier-and-mapping-information"], [702, "identifier-and-mapping-information"], [703, "identifier-and-mapping-information"], [704, "identifier-and-mapping-information"], [705, "identifier-and-mapping-information"], [706, "identifier-and-mapping-information"], [707, "identifier-and-mapping-information"], [708, "identifier-and-mapping-information"], [709, "identifier-and-mapping-information"], [710, "identifier-and-mapping-information"], [711, "identifier-and-mapping-information"], [712, "identifier-and-mapping-information"], [713, "identifier-and-mapping-information"], [714, "identifier-and-mapping-information"], [715, "identifier-and-mapping-information"], [716, "identifier-and-mapping-information"], [717, "identifier-and-mapping-information"], [718, "identifier-and-mapping-information"], [720, "identifier-and-mapping-information"], [721, "identifier-and-mapping-information"], [722, "identifier-and-mapping-information"], [723, "identifier-and-mapping-information"], [724, "identifier-and-mapping-information"], [725, "identifier-and-mapping-information"], [726, "identifier-and-mapping-information"], [727, "identifier-and-mapping-information"], [728, "identifier-and-mapping-information"], [729, "identifier-and-mapping-information"], [730, "identifier-and-mapping-information"], [731, "identifier-and-mapping-information"], [732, "identifier-and-mapping-information"], [733, "identifier-and-mapping-information"], [734, "identifier-and-mapping-information"], [735, "identifier-and-mapping-information"], [736, "identifier-and-mapping-information"], [738, "identifier-and-mapping-information"], [739, "identifier-and-mapping-information"], [740, "identifier-and-mapping-information"], [741, "identifier-and-mapping-information"], [742, "identifier-and-mapping-information"], [745, "identifier-and-mapping-information"], [746, "identifier-and-mapping-information"], [747, "identifier-and-mapping-information"], [748, "identifier-and-mapping-information"], [749, "identifier-and-mapping-information"], [750, "identifier-and-mapping-information"], [751, "identifier-and-mapping-information"], [752, "identifier-and-mapping-information"], [753, "identifier-and-mapping-information"], [754, "identifier-and-mapping-information"], [755, "identifier-and-mapping-information"], [756, "identifier-and-mapping-information"], [757, "identifier-and-mapping-information"], [758, "identifier-and-mapping-information"], [759, "identifier-and-mapping-information"], [760, "identifier-and-mapping-information"], [761, "identifier-and-mapping-information"], [762, "identifier-and-mapping-information"], [763, "identifier-and-mapping-information"], [764, "identifier-and-mapping-information"], [765, "identifier-and-mapping-information"], [766, "identifier-and-mapping-information"], [767, "identifier-and-mapping-information"], [768, "identifier-and-mapping-information"], [769, "identifier-and-mapping-information"], [770, "identifier-and-mapping-information"], [771, "identifier-and-mapping-information"], [772, "identifier-and-mapping-information"], [773, "identifier-and-mapping-information"], [774, "identifier-and-mapping-information"], [775, "identifier-and-mapping-information"], [776, "identifier-and-mapping-information"], [777, "identifier-and-mapping-information"], [778, "identifier-and-mapping-information"], [779, "identifier-and-mapping-information"], [780, "identifier-and-mapping-information"], [781, "identifier-and-mapping-information"], [783, "identifier-and-mapping-information"], [784, "identifier-and-mapping-information"], [785, "identifier-and-mapping-information"], [786, "identifier-and-mapping-information"], [787, "identifier-and-mapping-information"], [788, "identifier-and-mapping-information"], [789, "identifier-and-mapping-information"], [790, "identifier-and-mapping-information"], [791, "identifier-and-mapping-information"], [792, "identifier-and-mapping-information"], [793, "identifier-and-mapping-information"], [794, "identifier-and-mapping-information"], [795, "identifier-and-mapping-information"], [796, "identifier-and-mapping-information"], [797, "identifier-and-mapping-information"], [798, "identifier-and-mapping-information"], [799, "identifier-and-mapping-information"], [800, "identifier-and-mapping-information"], [801, "identifier-and-mapping-information"], [802, "identifier-and-mapping-information"], [803, "identifier-and-mapping-information"], [804, "identifier-and-mapping-information"], [805, "identifier-and-mapping-information"], [806, "identifier-and-mapping-information"], [807, "identifier-and-mapping-information"], [808, "identifier-and-mapping-information"], [809, "identifier-and-mapping-information"], [810, "identifier-and-mapping-information"], [811, "identifier-and-mapping-information"], [813, "identifier-and-mapping-information"], [815, "identifier-and-mapping-information"], [816, "identifier-and-mapping-information"], [817, "identifier-and-mapping-information"], [818, "identifier-and-mapping-information"], [819, "identifier-and-mapping-information"], [820, "identifier-and-mapping-information"], [821, "identifier-and-mapping-information"], [822, "identifier-and-mapping-information"], [823, "identifier-and-mapping-information"], [824, "identifier-and-mapping-information"], [825, "identifier-and-mapping-information"], [826, "identifier-and-mapping-information"], [827, "identifier-and-mapping-information"], [828, "identifier-and-mapping-information"], [829, "identifier-and-mapping-information"], [830, "identifier-and-mapping-information"], [831, "identifier-and-mapping-information"], [832, "identifier-and-mapping-information"], [833, "identifier-and-mapping-information"], [834, "identifier-and-mapping-information"], [835, "identifier-and-mapping-information"], [836, "identifier-and-mapping-information"], [837, "identifier-and-mapping-information"], [838, "identifier-and-mapping-information"], [839, "identifier-and-mapping-information"], [840, "identifier-and-mapping-information"], [841, "identifier-and-mapping-information"], [842, "identifier-and-mapping-information"], [843, "identifier-and-mapping-information"], [844, "identifier-and-mapping-information"], [845, "identifier-and-mapping-information"], [846, "identifier-and-mapping-information"], [847, "identifier-and-mapping-information"], [848, "identifier-and-mapping-information"], [849, "identifier-and-mapping-information"], [850, "identifier-and-mapping-information"], [851, "identifier-and-mapping-information"], [852, "identifier-and-mapping-information"], [853, "identifier-and-mapping-information"], [854, "identifier-and-mapping-information"], [855, "identifier-and-mapping-information"], [856, "identifier-and-mapping-information"], [857, "identifier-and-mapping-information"], [858, "identifier-and-mapping-information"], [859, "identifier-and-mapping-information"], [860, "identifier-and-mapping-information"], [861, "identifier-and-mapping-information"], [862, "identifier-and-mapping-information"], [863, "identifier-and-mapping-information"], [864, "identifier-and-mapping-information"], [865, "identifier-and-mapping-information"], [866, "identifier-and-mapping-information"], [867, "identifier-and-mapping-information"], [868, "identifier-and-mapping-information"], [869, "identifier-and-mapping-information"], [870, "identifier-and-mapping-information"], [871, "identifier-and-mapping-information"], [872, "identifier-and-mapping-information"], [873, "identifier-and-mapping-information"], [874, "identifier-and-mapping-information"], [875, "identifier-and-mapping-information"], [876, "identifier-and-mapping-information"], [877, "identifier-and-mapping-information"], [878, "identifier-and-mapping-information"], [879, "identifier-and-mapping-information"], [880, "identifier-and-mapping-information"], [881, "identifier-and-mapping-information"], [882, "identifier-and-mapping-information"], [883, "identifier-and-mapping-information"], [885, "identifier-and-mapping-information"], [886, "identifier-and-mapping-information"], [887, "identifier-and-mapping-information"], [888, "identifier-and-mapping-information"], [889, "identifier-and-mapping-information"], [890, "identifier-and-mapping-information"], [891, "identifier-and-mapping-information"], [892, "identifier-and-mapping-information"], [893, "identifier-and-mapping-information"], [894, "identifier-and-mapping-information"], [895, "identifier-and-mapping-information"], [896, "identifier-and-mapping-information"], [897, "identifier-and-mapping-information"], [898, "identifier-and-mapping-information"], [899, "identifier-and-mapping-information"], [900, "identifier-and-mapping-information"], [901, "identifier-and-mapping-information"], [902, "identifier-and-mapping-information"], [903, "identifier-and-mapping-information"], [904, "identifier-and-mapping-information"], [905, "identifier-and-mapping-information"], [906, "identifier-and-mapping-information"], [907, "identifier-and-mapping-information"], [908, "identifier-and-mapping-information"], [909, "identifier-and-mapping-information"], [910, "identifier-and-mapping-information"], [911, "identifier-and-mapping-information"], [913, "identifier-and-mapping-information"], [914, "identifier-and-mapping-information"], [915, "identifier-and-mapping-information"], [917, "identifier-and-mapping-information"], [918, "identifier-and-mapping-information"], [919, "identifier-and-mapping-information"], [920, "identifier-and-mapping-information"], [921, "identifier-and-mapping-information"], [922, "identifier-and-mapping-information"], [923, "identifier-and-mapping-information"], [924, "identifier-and-mapping-information"], [925, "identifier-and-mapping-information"], [926, "identifier-and-mapping-information"], [927, "identifier-and-mapping-information"], [928, "identifier-and-mapping-information"], [929, "identifier-and-mapping-information"], [930, "identifier-and-mapping-information"], [931, "identifier-and-mapping-information"], [932, "identifier-and-mapping-information"], [933, "identifier-and-mapping-information"], [934, "identifier-and-mapping-information"], [935, "identifier-and-mapping-information"], [936, "identifier-and-mapping-information"], [937, "identifier-and-mapping-information"], [938, "identifier-and-mapping-information"], [939, "identifier-and-mapping-information"], [940, "identifier-and-mapping-information"], [941, "identifier-and-mapping-information"], [942, "identifier-and-mapping-information"], [943, "identifier-and-mapping-information"], [944, "identifier-and-mapping-information"], [945, "identifier-and-mapping-information"], [946, "identifier-and-mapping-information"], [947, "identifier-and-mapping-information"], [948, "identifier-and-mapping-information"], [949, "identifier-and-mapping-information"], [950, "identifier-and-mapping-information"], [951, "identifier-and-mapping-information"], [952, "identifier-and-mapping-information"], [953, "identifier-and-mapping-information"], [954, "identifier-and-mapping-information"], [956, "identifier-and-mapping-information"], [957, "identifier-and-mapping-information"], [958, "identifier-and-mapping-information"], [959, "identifier-and-mapping-information"], [960, "identifier-and-mapping-information"], [961, "identifier-and-mapping-information"], [962, "identifier-and-mapping-information"], [963, "identifier-and-mapping-information"], [964, "identifier-and-mapping-information"], [965, "identifier-and-mapping-information"], [966, "identifier-and-mapping-information"], [967, "identifier-and-mapping-information"], [968, "identifier-and-mapping-information"], [970, "identifier-and-mapping-information"], [971, "identifier-and-mapping-information"], [972, "identifier-and-mapping-information"], [973, "identifier-and-mapping-information"], [974, "identifier-and-mapping-information"], [975, "identifier-and-mapping-information"], [976, "identifier-and-mapping-information"], [977, "identifier-and-mapping-information"], [978, "identifier-and-mapping-information"], [979, "identifier-and-mapping-information"], [980, "identifier-and-mapping-information"], [981, "identifier-and-mapping-information"], [982, "identifier-and-mapping-information"], [983, "identifier-and-mapping-information"], [984, "identifier-and-mapping-information"], [985, "identifier-and-mapping-information"], [986, "identifier-and-mapping-information"], [987, "identifier-and-mapping-information"], [988, "identifier-and-mapping-information"], [989, "identifier-and-mapping-information"], [990, "identifier-and-mapping-information"], [991, "identifier-and-mapping-information"], [992, "identifier-and-mapping-information"], [993, "identifier-and-mapping-information"], [994, "identifier-and-mapping-information"], [995, "identifier-and-mapping-information"], [996, "identifier-and-mapping-information"], [997, "identifier-and-mapping-information"], [998, "identifier-and-mapping-information"], [999, "identifier-and-mapping-information"], [1000, "identifier-and-mapping-information"], [1001, "identifier-and-mapping-information"], [1002, "identifier-and-mapping-information"], [1004, "identifier-and-mapping-information"], [1005, "identifier-and-mapping-information"], [1006, "identifier-and-mapping-information"], [1007, "identifier-and-mapping-information"], [1008, "identifier-and-mapping-information"], [1009, "identifier-and-mapping-information"], [1010, "identifier-and-mapping-information"], [1011, "identifier-and-mapping-information"], [1012, "identifier-and-mapping-information"], [1013, "identifier-and-mapping-information"], [1014, "identifier-and-mapping-information"], [1015, "identifier-and-mapping-information"], [1016, "identifier-and-mapping-information"], [1017, "identifier-and-mapping-information"], [1018, "identifier-and-mapping-information"], [1019, "identifier-and-mapping-information"], [1020, "identifier-and-mapping-information"], [1021, "identifier-and-mapping-information"], [1022, "identifier-and-mapping-information"], [1023, "identifier-and-mapping-information"], [1024, "identifier-and-mapping-information"], [1025, "identifier-and-mapping-information"], [1027, "identifier-and-mapping-information"], [1029, "identifier-and-mapping-information"], [1030, "identifier-and-mapping-information"], [1031, "identifier-and-mapping-information"], [1032, "identifier-and-mapping-information"], [1033, "identifier-and-mapping-information"], [1034, "identifier-and-mapping-information"], [1035, "identifier-and-mapping-information"], [1036, "identifier-and-mapping-information"], [1037, "identifier-and-mapping-information"], [1038, "identifier-and-mapping-information"], [1039, "identifier-and-mapping-information"], [1040, "identifier-and-mapping-information"], [1041, "identifier-and-mapping-information"], [1042, "identifier-and-mapping-information"], [1043, "identifier-and-mapping-information"], [1044, "identifier-and-mapping-information"], [1045, "identifier-and-mapping-information"], [1046, "identifier-and-mapping-information"], [1047, "identifier-and-mapping-information"], [1048, "identifier-and-mapping-information"], [1049, "identifier-and-mapping-information"], [1050, "identifier-and-mapping-information"], [1051, "identifier-and-mapping-information"], [1052, "identifier-and-mapping-information"], [1053, "identifier-and-mapping-information"], [1054, "identifier-and-mapping-information"], [1055, "identifier-and-mapping-information"], [1056, "identifier-and-mapping-information"], [1057, "identifier-and-mapping-information"], [1058, "identifier-and-mapping-information"], [1059, "identifier-and-mapping-information"], [1060, "identifier-and-mapping-information"], [1061, "identifier-and-mapping-information"], [1062, "identifier-and-mapping-information"], [1063, "identifier-and-mapping-information"], [1064, "identifier-and-mapping-information"], [1065, "identifier-and-mapping-information"], [1066, "identifier-and-mapping-information"], [1067, "identifier-and-mapping-information"], [1068, "identifier-and-mapping-information"], [1070, "identifier-and-mapping-information"], [1071, "identifier-and-mapping-information"], [1072, "identifier-and-mapping-information"], [1073, "identifier-and-mapping-information"], [1074, "identifier-and-mapping-information"], [1075, "identifier-and-mapping-information"], [1076, "identifier-and-mapping-information"], [1077, "identifier-and-mapping-information"], [1078, "identifier-and-mapping-information"], [1079, "identifier-and-mapping-information"], [1080, "identifier-and-mapping-information"], [1081, "identifier-and-mapping-information"], [1082, "identifier-and-mapping-information"], [1083, "identifier-and-mapping-information"], [1084, "identifier-and-mapping-information"], [1085, "identifier-and-mapping-information"], [1086, "identifier-and-mapping-information"], [1087, "identifier-and-mapping-information"], [1088, "identifier-and-mapping-information"], [1089, "identifier-and-mapping-information"], [1090, "identifier-and-mapping-information"], [1091, "identifier-and-mapping-information"], [1092, "identifier-and-mapping-information"], [1093, "identifier-and-mapping-information"], [1094, "identifier-and-mapping-information"], [1095, "identifier-and-mapping-information"], [1096, "identifier-and-mapping-information"], [1098, "identifier-and-mapping-information"], [1099, "identifier-and-mapping-information"]], "Schema Source": [[3, "schema-source"], [4, "schema-source"], [5, "schema-source"], [6, "schema-source"], [7, "schema-source"], [8, "schema-source"], [9, "schema-source"], [10, "schema-source"], [11, "schema-source"], [12, "schema-source"], [13, "schema-source"], [14, "schema-source"], [15, "schema-source"], [16, "schema-source"], [17, "schema-source"], [18, "schema-source"], [19, "schema-source"], [20, "schema-source"], [21, "schema-source"], [22, "schema-source"], [23, "schema-source"], [24, "schema-source"], [25, "schema-source"], [26, "schema-source"], [27, "schema-source"], [28, "schema-source"], [29, "schema-source"], [30, "schema-source"], [32, "schema-source"], [33, "schema-source"], [34, "schema-source"], [35, "schema-source"], [36, "schema-source"], [37, "schema-source"], [38, "schema-source"], [39, "schema-source"], [40, "schema-source"], [41, "schema-source"], [42, "schema-source"], [43, "schema-source"], [44, "schema-source"], [45, "schema-source"], [47, "schema-source"], [48, "schema-source"], [49, "schema-source"], [50, "schema-source"], [51, "schema-source"], [52, "schema-source"], [53, "schema-source"], [54, "schema-source"], [55, "schema-source"], [56, "schema-source"], [57, "schema-source"], [58, "schema-source"], [59, "schema-source"], [60, "schema-source"], [61, "schema-source"], [62, "schema-source"], [63, "schema-source"], [64, "schema-source"], [65, "schema-source"], [66, "schema-source"], [67, "schema-source"], [68, "schema-source"], [69, "schema-source"], [70, "schema-source"], [71, "schema-source"], [72, "schema-source"], [73, "schema-source"], [74, "schema-source"], [75, "schema-source"], [76, "schema-source"], [77, "schema-source"], [78, "schema-source"], [79, "schema-source"], [80, "schema-source"], [81, "schema-source"], [82, "schema-source"], [83, "schema-source"], [84, "schema-source"], [85, "schema-source"], [86, "schema-source"], [87, "schema-source"], [88, "schema-source"], [89, "schema-source"], [90, "schema-source"], [91, "schema-source"], [92, "schema-source"], [93, "schema-source"], [94, "schema-source"], [95, "schema-source"], [96, "schema-source"], [97, "schema-source"], [98, "schema-source"], [99, "schema-source"], [100, "schema-source"], [101, "schema-source"], [102, "schema-source"], [103, "schema-source"], [104, "schema-source"], [105, "schema-source"], [106, "schema-source"], [107, "schema-source"], [108, "schema-source"], [109, "schema-source"], [110, "schema-source"], [111, "schema-source"], [112, "schema-source"], [113, "schema-source"], [114, "schema-source"], [115, "schema-source"], [116, "schema-source"], [117, "schema-source"], [118, "schema-source"], [119, "schema-source"], [121, "schema-source"], [122, "schema-source"], [123, "schema-source"], [124, "schema-source"], [125, "schema-source"], [126, "schema-source"], [128, "schema-source"], [129, "schema-source"], [130, "schema-source"], [131, "schema-source"], [132, "schema-source"], [133, "schema-source"], [134, "schema-source"], [135, "schema-source"], [136, "schema-source"], [137, "schema-source"], [138, "schema-source"], [139, "schema-source"], [140, "schema-source"], [141, "schema-source"], [142, "schema-source"], [143, "schema-source"], [144, "schema-source"], [145, "schema-source"], [146, "schema-source"], [147, "schema-source"], [148, "schema-source"], [149, "schema-source"], [150, "schema-source"], [151, "schema-source"], [152, "schema-source"], [153, "schema-source"], [154, "schema-source"], [155, "schema-source"], [156, "schema-source"], [157, "schema-source"], [158, "schema-source"], [159, "schema-source"], [160, "schema-source"], [161, "schema-source"], [162, "schema-source"], [163, "schema-source"], [166, "schema-source"], [167, "schema-source"], [168, "schema-source"], [169, "schema-source"], [170, "schema-source"], [172, "schema-source"], [173, "schema-source"], [175, "schema-source"], [176, "schema-source"], [177, "schema-source"], [178, "schema-source"], [179, "schema-source"], [181, "schema-source"], [182, "schema-source"], [183, "schema-source"], [184, "schema-source"], [185, "schema-source"], [186, "schema-source"], [187, "schema-source"], [188, "schema-source"], [190, "schema-source"], [191, "schema-source"], [193, "schema-source"], [194, "schema-source"], [195, "schema-source"], [196, "schema-source"], [198, "schema-source"], [199, "schema-source"], [200, "schema-source"], [201, "schema-source"], [205, "schema-source"], [206, "schema-source"], [207, "schema-source"], [208, "schema-source"], [209, "schema-source"], [210, "schema-source"], [211, "schema-source"], [212, "schema-source"], [213, "schema-source"], [214, "schema-source"], [215, "schema-source"], [216, "schema-source"], [217, "schema-source"], [218, "schema-source"], [219, "schema-source"], [220, "schema-source"], [221, "schema-source"], [222, "schema-source"], [223, "schema-source"], [224, "schema-source"], [225, "schema-source"], [226, "schema-source"], [227, "schema-source"], [228, "schema-source"], [229, "schema-source"], [230, "schema-source"], [232, "schema-source"], [234, "schema-source"], [235, "schema-source"], [237, "schema-source"], [239, "schema-source"], [240, "schema-source"], [241, "schema-source"], [242, "schema-source"], [244, "schema-source"], [245, "schema-source"], [246, "schema-source"], [247, "schema-source"], [248, "schema-source"], [249, "schema-source"], [251, "schema-source"], [252, "schema-source"], [253, "schema-source"], [254, "schema-source"], [255, "schema-source"], [256, "schema-source"], [257, "schema-source"], [258, "schema-source"], [259, "schema-source"], [260, "schema-source"], [261, "schema-source"], [262, "schema-source"], [263, "schema-source"], [264, "schema-source"], [265, "schema-source"], [266, "schema-source"], [267, "schema-source"], [268, "schema-source"], [269, "schema-source"], [270, "schema-source"], [271, "schema-source"], [272, "schema-source"], [273, "schema-source"], [274, "schema-source"], [275, "schema-source"], [276, "schema-source"], [277, "schema-source"], [278, "schema-source"], [279, "schema-source"], [280, "schema-source"], [284, "schema-source"], [285, "schema-source"], [286, "schema-source"], [287, "schema-source"], [288, "schema-source"], [289, "schema-source"], [290, "schema-source"], [291, "schema-source"], [292, "schema-source"], [293, "schema-source"], [294, "schema-source"], [296, "schema-source"], [297, "schema-source"], [298, "schema-source"], [299, "schema-source"], [300, "schema-source"], [301, "schema-source"], [302, "schema-source"], [303, "schema-source"], [304, "schema-source"], [305, "schema-source"], [306, "schema-source"], [307, "schema-source"], [308, "schema-source"], [309, "schema-source"], [310, "schema-source"], [311, "schema-source"], [312, "schema-source"], [313, "schema-source"], [314, "schema-source"], [315, "schema-source"], [316, "schema-source"], [317, "schema-source"], [318, "schema-source"], [319, "schema-source"], [320, "schema-source"], [321, "schema-source"], [322, "schema-source"], [323, "schema-source"], [324, "schema-source"], [325, "schema-source"], [326, "schema-source"], [327, "schema-source"], [328, "schema-source"], [329, "schema-source"], [330, "schema-source"], [331, "schema-source"], [332, "schema-source"], [334, "schema-source"], [339, "schema-source"], [340, "schema-source"], [341, "schema-source"], [342, "schema-source"], [343, "schema-source"], [344, "schema-source"], [345, "schema-source"], [346, "schema-source"], [347, "schema-source"], [348, "schema-source"], [349, "schema-source"], [350, "schema-source"], [351, "schema-source"], [352, "schema-source"], [353, "schema-source"], [354, "schema-source"], [355, "schema-source"], [357, "schema-source"], [358, "schema-source"], [359, "schema-source"], [360, "schema-source"], [361, "schema-source"], [362, "schema-source"], [363, "schema-source"], [364, "schema-source"], [365, "schema-source"], [366, "schema-source"], [367, "schema-source"], [368, "schema-source"], [369, "schema-source"], [370, "schema-source"], [371, "schema-source"], [373, "schema-source"], [374, "schema-source"], [375, "schema-source"], [376, "schema-source"], [377, "schema-source"], [378, "schema-source"], [379, "schema-source"], [380, "schema-source"], [381, "schema-source"], [382, "schema-source"], [383, "schema-source"], [384, "schema-source"], [385, "schema-source"], [386, "schema-source"], [387, "schema-source"], [388, "schema-source"], [389, "schema-source"], [390, "schema-source"], [391, "schema-source"], [392, "schema-source"], [393, "schema-source"], [394, "schema-source"], [395, "schema-source"], [396, "schema-source"], [397, "schema-source"], [398, "schema-source"], [399, "schema-source"], [400, "schema-source"], [401, "schema-source"], [402, "schema-source"], [403, "schema-source"], [404, "schema-source"], [405, "schema-source"], [406, "schema-source"], [407, "schema-source"], [408, "schema-source"], [409, "schema-source"], [410, "schema-source"], [411, "schema-source"], [412, "schema-source"], [413, "schema-source"], [414, "schema-source"], [415, "schema-source"], [416, "schema-source"], [417, "schema-source"], [418, "schema-source"], [419, "schema-source"], [420, "schema-source"], [421, "schema-source"], [422, "schema-source"], [423, "schema-source"], [424, "schema-source"], [425, "schema-source"], [426, "schema-source"], [427, "schema-source"], [428, "schema-source"], [429, "schema-source"], [430, "schema-source"], [431, "schema-source"], [432, "schema-source"], [433, "schema-source"], [434, "schema-source"], [435, "schema-source"], [436, "schema-source"], [437, "schema-source"], [438, "schema-source"], [440, "schema-source"], [442, "schema-source"], [443, "schema-source"], [444, "schema-source"], [445, "schema-source"], [446, "schema-source"], [447, "schema-source"], [448, "schema-source"], [449, "schema-source"], [452, "schema-source"], [453, "schema-source"], [454, "schema-source"], [455, "schema-source"], [456, "schema-source"], [457, "schema-source"], [458, "schema-source"], [459, "schema-source"], [460, "schema-source"], [461, "schema-source"], [462, "schema-source"], [463, "schema-source"], [464, "schema-source"], [465, "schema-source"], [466, "schema-source"], [467, "schema-source"], [468, "schema-source"], [469, "schema-source"], [470, "schema-source"], [472, "schema-source"], [473, "schema-source"], [474, "schema-source"], [475, "schema-source"], [476, "schema-source"], [477, "schema-source"], [478, "schema-source"], [479, "schema-source"], [480, "schema-source"], [481, "schema-source"], [482, "schema-source"], [483, "schema-source"], [484, "schema-source"], [485, "schema-source"], [486, "schema-source"], [487, "schema-source"], [488, "schema-source"], [489, "schema-source"], [490, "schema-source"], [491, "schema-source"], [492, "schema-source"], [493, "schema-source"], [494, "schema-source"], [495, "schema-source"], [496, "schema-source"], [497, "schema-source"], [498, "schema-source"], [499, "schema-source"], [500, "schema-source"], [501, "schema-source"], [502, "schema-source"], [503, "schema-source"], [504, "schema-source"], [505, "schema-source"], [506, "schema-source"], [507, "schema-source"], [508, "schema-source"], [509, "schema-source"], [510, "schema-source"], [511, "schema-source"], [512, "schema-source"], [513, "schema-source"], [514, "schema-source"], [515, "schema-source"], [516, "schema-source"], [517, "schema-source"], [518, "schema-source"], [519, "schema-source"], [520, "schema-source"], [521, "schema-source"], [522, "schema-source"], [523, "schema-source"], [524, "schema-source"], [525, "schema-source"], [526, "schema-source"], [527, "schema-source"], [528, "schema-source"], [529, "schema-source"], [530, "schema-source"], [531, "schema-source"], [532, "schema-source"], [533, "schema-source"], [534, "schema-source"], [535, "schema-source"], [537, "schema-source"], [538, "schema-source"], [539, "schema-source"], [540, "schema-source"], [541, "schema-source"], [542, "schema-source"], [543, "schema-source"], [544, "schema-source"], [545, "schema-source"], [546, "schema-source"], [547, "schema-source"], [548, "schema-source"], [549, "schema-source"], [550, "schema-source"], [551, "schema-source"], [552, "schema-source"], [553, "schema-source"], [554, "schema-source"], [555, "schema-source"], [556, "schema-source"], [557, "schema-source"], [558, "schema-source"], [559, "schema-source"], [560, "schema-source"], [561, "schema-source"], [562, "schema-source"], [563, "schema-source"], [564, "schema-source"], [565, "schema-source"], [566, "schema-source"], [567, "schema-source"], [568, "schema-source"], [569, "schema-source"], [570, "schema-source"], [571, "schema-source"], [572, "schema-source"], [573, "schema-source"], [574, "schema-source"], [575, "schema-source"], [576, "schema-source"], [577, "schema-source"], [578, "schema-source"], [579, "schema-source"], [580, "schema-source"], [581, "schema-source"], [582, "schema-source"], [583, "schema-source"], [584, "schema-source"], [585, "schema-source"], [586, "schema-source"], [587, "schema-source"], [588, "schema-source"], [589, "schema-source"], [590, "schema-source"], [591, "schema-source"], [592, "schema-source"], [593, "schema-source"], [594, "schema-source"], [595, "schema-source"], [596, "schema-source"], [597, "schema-source"], [598, "schema-source"], [599, "schema-source"], [600, "schema-source"], [601, "schema-source"], [602, "schema-source"], [603, "schema-source"], [604, "schema-source"], [605, "schema-source"], [606, "schema-source"], [607, "schema-source"], [608, "schema-source"], [609, "schema-source"], [610, "schema-source"], [611, "schema-source"], [612, "schema-source"], [613, "schema-source"], [614, "schema-source"], [616, "schema-source"], [617, "schema-source"], [618, "schema-source"], [619, "schema-source"], [620, "schema-source"], [621, "schema-source"], [622, "schema-source"], [623, "schema-source"], [624, "schema-source"], [625, "schema-source"], [626, "schema-source"], [627, "schema-source"], [628, "schema-source"], [629, "schema-source"], [630, "schema-source"], [631, "schema-source"], [632, "schema-source"], [633, "schema-source"], [634, "schema-source"], [635, "schema-source"], [636, "schema-source"], [637, "schema-source"], [638, "schema-source"], [639, "schema-source"], [640, "schema-source"], [641, "schema-source"], [642, "schema-source"], [643, "schema-source"], [645, "schema-source"], [646, "schema-source"], [647, "schema-source"], [648, "schema-source"], [649, "schema-source"], [650, "schema-source"], [651, "schema-source"], [652, "schema-source"], [653, "schema-source"], [654, "schema-source"], [655, "schema-source"], [656, "schema-source"], [657, "schema-source"], [658, "schema-source"], [659, "schema-source"], [660, "schema-source"], [661, "schema-source"], [662, "schema-source"], [663, "schema-source"], [664, "schema-source"], [665, "schema-source"], [666, "schema-source"], [667, "schema-source"], [668, "schema-source"], [669, "schema-source"], [670, "schema-source"], [672, "schema-source"], [673, "schema-source"], [674, "schema-source"], [675, "schema-source"], [676, "schema-source"], [677, "schema-source"], [678, "schema-source"], [679, "schema-source"], [680, "schema-source"], [681, "schema-source"], [682, "schema-source"], [683, "schema-source"], [684, "schema-source"], [685, "schema-source"], [686, "schema-source"], [687, "schema-source"], [688, "schema-source"], [689, "schema-source"], [690, "schema-source"], [691, "schema-source"], [692, "schema-source"], [693, "schema-source"], [694, "schema-source"], [695, "schema-source"], [696, "schema-source"], [697, "schema-source"], [698, "schema-source"], [699, "schema-source"], [700, "schema-source"], [701, "schema-source"], [702, "schema-source"], [703, "schema-source"], [704, "schema-source"], [705, "schema-source"], [706, "schema-source"], [707, "schema-source"], [708, "schema-source"], [709, "schema-source"], [710, "schema-source"], [712, "schema-source"], [713, "schema-source"], [714, "schema-source"], [715, "schema-source"], [716, "schema-source"], [717, "schema-source"], [718, "schema-source"], [720, "schema-source"], [721, "schema-source"], [722, "schema-source"], [723, "schema-source"], [724, "schema-source"], [725, "schema-source"], [726, "schema-source"], [727, "schema-source"], [728, "schema-source"], [729, "schema-source"], [730, "schema-source"], [731, "schema-source"], [732, "schema-source"], [733, "schema-source"], [734, "schema-source"], [735, "schema-source"], [736, "schema-source"], [738, "schema-source"], [739, "schema-source"], [740, "schema-source"], [741, "schema-source"], [742, "schema-source"], [745, "schema-source"], [746, "schema-source"], [747, "schema-source"], [748, "schema-source"], [749, "schema-source"], [750, "schema-source"], [751, "schema-source"], [752, "schema-source"], [753, "schema-source"], [754, "schema-source"], [755, "schema-source"], [756, "schema-source"], [757, "schema-source"], [758, "schema-source"], [759, "schema-source"], [760, "schema-source"], [761, "schema-source"], [762, "schema-source"], [763, "schema-source"], [764, "schema-source"], [765, "schema-source"], [766, "schema-source"], [767, "schema-source"], [768, "schema-source"], [769, "schema-source"], [770, "schema-source"], [771, "schema-source"], [772, "schema-source"], [773, "schema-source"], [774, "schema-source"], [775, "schema-source"], [776, "schema-source"], [777, "schema-source"], [778, "schema-source"], [779, "schema-source"], [780, "schema-source"], [781, "schema-source"], [783, "schema-source"], [784, "schema-source"], [785, "schema-source"], [786, "schema-source"], [787, "schema-source"], [788, "schema-source"], [789, "schema-source"], [790, "schema-source"], [791, "schema-source"], [792, "schema-source"], [793, "schema-source"], [794, "schema-source"], [795, "schema-source"], [796, "schema-source"], [797, "schema-source"], [798, "schema-source"], [799, "schema-source"], [800, "schema-source"], [801, "schema-source"], [802, "schema-source"], [803, "schema-source"], [804, "schema-source"], [805, "schema-source"], [806, "schema-source"], [807, "schema-source"], [808, "schema-source"], [809, "schema-source"], [810, "schema-source"], [811, "schema-source"], [813, "schema-source"], [815, "schema-source"], [816, "schema-source"], [817, "schema-source"], [818, "schema-source"], [819, "schema-source"], [820, "schema-source"], [821, "schema-source"], [822, "schema-source"], [823, "schema-source"], [824, "schema-source"], [825, "schema-source"], [826, "schema-source"], [827, "schema-source"], [828, "schema-source"], [829, "schema-source"], [830, "schema-source"], [831, "schema-source"], [832, "schema-source"], [833, "schema-source"], [834, "schema-source"], [835, "schema-source"], [836, "schema-source"], [837, "schema-source"], [838, "schema-source"], [839, "schema-source"], [840, "schema-source"], [841, "schema-source"], [842, "schema-source"], [843, "schema-source"], [844, "schema-source"], [845, "schema-source"], [846, "schema-source"], [847, "schema-source"], [848, "schema-source"], [849, "schema-source"], [850, "schema-source"], [851, "schema-source"], [852, "schema-source"], [853, "schema-source"], [854, "schema-source"], [855, "schema-source"], [856, "schema-source"], [857, "schema-source"], [858, "schema-source"], [859, "schema-source"], [860, "schema-source"], [861, "schema-source"], [862, "schema-source"], [863, "schema-source"], [864, "schema-source"], [865, "schema-source"], [866, "schema-source"], [867, "schema-source"], [868, "schema-source"], [869, "schema-source"], [870, "schema-source"], [871, "schema-source"], [872, "schema-source"], [873, "schema-source"], [874, "schema-source"], [875, "schema-source"], [876, "schema-source"], [877, "schema-source"], [878, "schema-source"], [879, "schema-source"], [880, "schema-source"], [885, "schema-source"], [886, "schema-source"], [887, "schema-source"], [888, "schema-source"], [889, "schema-source"], [890, "schema-source"], [891, "schema-source"], [892, "schema-source"], [893, "schema-source"], [894, "schema-source"], [895, "schema-source"], [896, "schema-source"], [897, "schema-source"], [898, "schema-source"], [899, "schema-source"], [900, "schema-source"], [901, "schema-source"], [902, "schema-source"], [903, "schema-source"], [904, "schema-source"], [905, "schema-source"], [906, "schema-source"], [907, "schema-source"], [908, "schema-source"], [909, "schema-source"], [910, "schema-source"], [911, "schema-source"], [913, "schema-source"], [914, "schema-source"], [915, "schema-source"], [917, "schema-source"], [918, "schema-source"], [919, "schema-source"], [920, "schema-source"], [921, "schema-source"], [922, "schema-source"], [923, "schema-source"], [924, "schema-source"], [925, "schema-source"], [926, "schema-source"], [927, "schema-source"], [928, "schema-source"], [929, "schema-source"], [930, "schema-source"], [931, "schema-source"], [932, "schema-source"], [933, "schema-source"], [934, "schema-source"], [935, "schema-source"], [936, "schema-source"], [937, "schema-source"], [938, "schema-source"], [939, "schema-source"], [940, "schema-source"], [941, "schema-source"], [942, "schema-source"], [943, "schema-source"], [944, "schema-source"], [945, "schema-source"], [946, "schema-source"], [947, "schema-source"], [948, "schema-source"], [949, "schema-source"], [950, "schema-source"], [951, "schema-source"], [952, "schema-source"], [953, "schema-source"], [954, "schema-source"], [956, "schema-source"], [957, "schema-source"], [958, "schema-source"], [959, "schema-source"], [960, "schema-source"], [961, "schema-source"], [962, "schema-source"], [963, "schema-source"], [964, "schema-source"], [965, "schema-source"], [966, "schema-source"], [967, "schema-source"], [968, "schema-source"], [970, "schema-source"], [971, "schema-source"], [972, "schema-source"], [973, "schema-source"], [974, "schema-source"], [975, "schema-source"], [976, "schema-source"], [977, "schema-source"], [978, "schema-source"], [979, "schema-source"], [980, "schema-source"], [981, "schema-source"], [982, "schema-source"], [983, "schema-source"], [984, "schema-source"], [985, "schema-source"], [986, "schema-source"], [987, "schema-source"], [988, "schema-source"], [989, "schema-source"], [990, "schema-source"], [991, "schema-source"], [992, "schema-source"], [993, "schema-source"], [994, "schema-source"], [995, "schema-source"], [996, "schema-source"], [997, "schema-source"], [998, "schema-source"], [999, "schema-source"], [1000, "schema-source"], [1001, "schema-source"], [1002, "schema-source"], [1004, "schema-source"], [1005, "schema-source"], [1006, "schema-source"], [1007, "schema-source"], [1008, "schema-source"], [1010, "schema-source"], [1011, "schema-source"], [1012, "schema-source"], [1013, "schema-source"], [1014, "schema-source"], [1015, "schema-source"], [1016, "schema-source"], [1017, "schema-source"], [1018, "schema-source"], [1019, "schema-source"], [1020, "schema-source"], [1021, "schema-source"], [1022, "schema-source"], [1023, "schema-source"], [1024, "schema-source"], [1025, "schema-source"], [1027, "schema-source"], [1029, "schema-source"], [1030, "schema-source"], [1031, "schema-source"], [1032, "schema-source"], [1033, "schema-source"], [1034, "schema-source"], [1035, "schema-source"], [1036, "schema-source"], [1037, "schema-source"], [1038, "schema-source"], [1039, "schema-source"], [1040, "schema-source"], [1041, "schema-source"], [1042, "schema-source"], [1043, "schema-source"], [1044, "schema-source"], [1045, "schema-source"], [1046, "schema-source"], [1047, "schema-source"], [1048, "schema-source"], [1049, "schema-source"], [1050, "schema-source"], [1051, "schema-source"], [1052, "schema-source"], [1053, "schema-source"], [1054, "schema-source"], [1055, "schema-source"], [1056, "schema-source"], [1057, "schema-source"], [1058, "schema-source"], [1059, "schema-source"], [1060, "schema-source"], [1061, "schema-source"], [1062, "schema-source"], [1063, "schema-source"], [1064, "schema-source"], [1065, "schema-source"], [1066, "schema-source"], [1067, "schema-source"], [1068, "schema-source"], [1070, "schema-source"], [1071, "schema-source"], [1072, "schema-source"], [1073, "schema-source"], [1074, "schema-source"], [1075, "schema-source"], [1076, "schema-source"], [1077, "schema-source"], [1078, "schema-source"], [1079, "schema-source"], [1080, "schema-source"], [1081, "schema-source"], [1082, "schema-source"], [1083, "schema-source"], [1084, "schema-source"], [1085, "schema-source"], [1086, "schema-source"], [1087, "schema-source"], [1088, "schema-source"], [1089, "schema-source"], [1090, "schema-source"], [1091, "schema-source"], [1092, "schema-source"], [1093, "schema-source"], [1094, "schema-source"], [1095, "schema-source"], [1096, "schema-source"], [1098, "schema-source"], [1099, "schema-source"]], "LinkML Source": [[3, "linkml-source"], [4, "linkml-source"], [17, "linkml-source"], [20, "linkml-source"], [21, "linkml-source"], [22, "linkml-source"], [23, "linkml-source"], [24, "linkml-source"], [30, "linkml-source"], [32, "linkml-source"], [33, "linkml-source"], [34, "linkml-source"], [35, "linkml-source"], [36, "linkml-source"], [37, "linkml-source"], [38, "linkml-source"], [39, "linkml-source"], [40, "linkml-source"], [41, "linkml-source"], [42, "linkml-source"], [43, "linkml-source"], [44, "linkml-source"], [45, "linkml-source"], [47, "linkml-source"], [48, "linkml-source"], [49, "linkml-source"], [50, "linkml-source"], [51, "linkml-source"], [52, "linkml-source"], [53, "linkml-source"], [54, "linkml-source"], [55, "linkml-source"], [56, "linkml-source"], [57, "linkml-source"], [58, "linkml-source"], [59, "linkml-source"], [60, "linkml-source"], [61, "linkml-source"], [62, "linkml-source"], [63, "linkml-source"], [64, "linkml-source"], [65, "linkml-source"], [66, "linkml-source"], [67, "linkml-source"], [68, "linkml-source"], [69, "linkml-source"], [70, "linkml-source"], [71, "linkml-source"], [72, "linkml-source"], [73, "linkml-source"], [74, "linkml-source"], [75, "linkml-source"], [76, "linkml-source"], [77, "linkml-source"], [78, "linkml-source"], [79, "linkml-source"], [80, "linkml-source"], [81, "linkml-source"], [82, "linkml-source"], [83, "linkml-source"], [84, "linkml-source"], [85, "linkml-source"], [86, "linkml-source"], [87, "linkml-source"], [88, "linkml-source"], [89, "linkml-source"], [90, "linkml-source"], [91, "linkml-source"], [92, "linkml-source"], [94, "linkml-source"], [95, "linkml-source"], [96, "linkml-source"], [111, "linkml-source"], [117, "linkml-source"], [118, "linkml-source"], [119, "linkml-source"], [121, "linkml-source"], [122, "linkml-source"], [123, "linkml-source"], [124, "linkml-source"], [125, "linkml-source"], [126, "linkml-source"], [128, "linkml-source"], [129, "linkml-source"], [130, "linkml-source"], [131, "linkml-source"], [132, "linkml-source"], [133, "linkml-source"], [134, "linkml-source"], [135, "linkml-source"], [142, "linkml-source"], [150, "linkml-source"], [155, "linkml-source"], [159, "linkml-source"], [163, "linkml-source"], [166, "linkml-source"], [167, "linkml-source"], [168, "linkml-source"], [169, "linkml-source"], [170, "linkml-source"], [172, "linkml-source"], [173, "linkml-source"], [175, "linkml-source"], [176, "linkml-source"], [177, "linkml-source"], [178, "linkml-source"], [179, "linkml-source"], [181, "linkml-source"], [182, "linkml-source"], [183, "linkml-source"], [184, "linkml-source"], [185, "linkml-source"], [186, "linkml-source"], [187, "linkml-source"], [188, "linkml-source"], [190, "linkml-source"], [191, "linkml-source"], [193, "linkml-source"], [194, "linkml-source"], [195, "linkml-source"], [196, "linkml-source"], [198, "linkml-source"], [199, "linkml-source"], [200, "linkml-source"], [201, "linkml-source"], [214, "linkml-source"], [215, "linkml-source"], [216, "linkml-source"], [219, "linkml-source"], [225, "linkml-source"], [229, "linkml-source"], [230, "linkml-source"], [231, "linkml-source"], [232, "linkml-source"], [233, "linkml-source"], [234, "linkml-source"], [235, "linkml-source"], [237, "linkml-source"], [239, "linkml-source"], [240, "linkml-source"], [241, "linkml-source"], [242, "linkml-source"], [243, "linkml-source"], [244, "linkml-source"], [245, "linkml-source"], [246, "linkml-source"], [247, "linkml-source"], [248, "linkml-source"], [249, "linkml-source"], [251, "linkml-source"], [252, "linkml-source"], [264, "linkml-source"], [265, "linkml-source"], [266, "linkml-source"], [267, "linkml-source"], [271, "linkml-source"], [275, "linkml-source"], [278, "linkml-source"], [279, "linkml-source"], [280, "linkml-source"], [284, "linkml-source"], [285, "linkml-source"], [286, "linkml-source"], [287, "linkml-source"], [288, "linkml-source"], [289, "linkml-source"], [290, "linkml-source"], [291, "linkml-source"], [292, "linkml-source"], [293, "linkml-source"], [294, "linkml-source"], [296, "linkml-source"], [297, "linkml-source"], [309, "linkml-source"], [310, "linkml-source"], [311, "linkml-source"], [312, "linkml-source"], [313, "linkml-source"], [314, "linkml-source"], [318, "linkml-source"], [319, "linkml-source"], [320, "linkml-source"], [323, "linkml-source"], [324, "linkml-source"], [326, "linkml-source"], [329, "linkml-source"], [330, "linkml-source"], [331, "linkml-source"], [332, "linkml-source"], [334, "linkml-source"], [339, "linkml-source"], [340, "linkml-source"], [341, "linkml-source"], [342, "linkml-source"], [343, "linkml-source"], [344, "linkml-source"], [345, "linkml-source"], [346, "linkml-source"], [347, "linkml-source"], [348, "linkml-source"], [349, "linkml-source"], [350, "linkml-source"], [351, "linkml-source"], [352, "linkml-source"], [353, "linkml-source"], [354, "linkml-source"], [355, "linkml-source"], [356, "linkml-source"], [357, "linkml-source"], [358, "linkml-source"], [359, "linkml-source"], [360, "linkml-source"], [361, "linkml-source"], [362, "linkml-source"], [363, "linkml-source"], [364, "linkml-source"], [365, "linkml-source"], [366, "linkml-source"], [367, "linkml-source"], [368, "linkml-source"], [369, "linkml-source"], [370, "linkml-source"], [371, "linkml-source"], [373, "linkml-source"], [374, "linkml-source"], [375, "linkml-source"], [382, "linkml-source"], [383, "linkml-source"], [384, "linkml-source"], [386, "linkml-source"], [387, "linkml-source"], [388, "linkml-source"], [390, "linkml-source"], [391, "linkml-source"], [395, "linkml-source"], [396, "linkml-source"], [398, "linkml-source"], [399, "linkml-source"], [404, "linkml-source"], [405, "linkml-source"], [406, "linkml-source"], [407, "linkml-source"], [408, "linkml-source"], [412, "linkml-source"], [413, "linkml-source"], [414, "linkml-source"], [419, "linkml-source"], [421, "linkml-source"], [422, "linkml-source"], [423, "linkml-source"], [424, "linkml-source"], [425, "linkml-source"], [426, "linkml-source"], [427, "linkml-source"], [428, "linkml-source"], [429, "linkml-source"], [430, "linkml-source"], [431, "linkml-source"], [432, "linkml-source"], [433, "linkml-source"], [434, "linkml-source"], [435, "linkml-source"], [436, "linkml-source"], [437, "linkml-source"], [438, "linkml-source"], [440, "linkml-source"], [442, "linkml-source"], [443, "linkml-source"], [444, "linkml-source"], [445, "linkml-source"], [446, "linkml-source"], [447, "linkml-source"], [448, "linkml-source"], [449, "linkml-source"], [452, "linkml-source"], [453, "linkml-source"], [454, "linkml-source"], [455, "linkml-source"], [456, "linkml-source"], [457, "linkml-source"], [458, "linkml-source"], [459, "linkml-source"], [460, "linkml-source"], [462, "linkml-source"], [464, "linkml-source"], [465, "linkml-source"], [466, "linkml-source"], [467, "linkml-source"], [468, "linkml-source"], [469, "linkml-source"], [470, "linkml-source"], [472, "linkml-source"], [473, "linkml-source"], [474, "linkml-source"], [475, "linkml-source"], [476, "linkml-source"], [477, "linkml-source"], [478, "linkml-source"], [481, "linkml-source"], [482, "linkml-source"], [483, "linkml-source"], [484, "linkml-source"], [485, "linkml-source"], [486, "linkml-source"], [487, "linkml-source"], [490, "linkml-source"], [491, "linkml-source"], [497, "linkml-source"], [499, "linkml-source"], [504, "linkml-source"], [505, "linkml-source"], [506, "linkml-source"], [507, "linkml-source"], [508, "linkml-source"], [509, "linkml-source"], [510, "linkml-source"], [511, "linkml-source"], [512, "linkml-source"], [513, "linkml-source"], [514, "linkml-source"], [520, "linkml-source"], [521, "linkml-source"], [522, "linkml-source"], [523, "linkml-source"], [524, "linkml-source"], [528, "linkml-source"], [529, "linkml-source"], [532, "linkml-source"], [534, "linkml-source"], [535, "linkml-source"], [537, "linkml-source"], [538, "linkml-source"], [539, "linkml-source"], [542, "linkml-source"], [543, "linkml-source"], [544, "linkml-source"], [547, "linkml-source"], [551, "linkml-source"], [552, "linkml-source"], [553, "linkml-source"], [554, "linkml-source"], [555, "linkml-source"], [556, "linkml-source"], [557, "linkml-source"], [558, "linkml-source"], [559, "linkml-source"], [560, "linkml-source"], [561, "linkml-source"], [562, "linkml-source"], [563, "linkml-source"], [564, "linkml-source"], [565, "linkml-source"], [566, "linkml-source"], [567, "linkml-source"], [568, "linkml-source"], [569, "linkml-source"], [570, "linkml-source"], [571, "linkml-source"], [572, "linkml-source"], [573, "linkml-source"], [574, "linkml-source"], [575, "linkml-source"], [576, "linkml-source"], [577, "linkml-source"], [578, "linkml-source"], [579, "linkml-source"], [580, "linkml-source"], [581, "linkml-source"], [582, "linkml-source"], [583, "linkml-source"], [584, "linkml-source"], [585, "linkml-source"], [586, "linkml-source"], [587, "linkml-source"], [588, "linkml-source"], [589, "linkml-source"], [590, "linkml-source"], [591, "linkml-source"], [592, "linkml-source"], [593, "linkml-source"], [594, "linkml-source"], [595, "linkml-source"], [596, "linkml-source"], [597, "linkml-source"], [598, "linkml-source"], [599, "linkml-source"], [600, "linkml-source"], [601, "linkml-source"], [602, "linkml-source"], [603, "linkml-source"], [604, "linkml-source"], [605, "linkml-source"], [606, "linkml-source"], [607, "linkml-source"], [608, "linkml-source"], [609, "linkml-source"], [610, "linkml-source"], [611, "linkml-source"], [612, "linkml-source"], [613, "linkml-source"], [614, "linkml-source"], [616, "linkml-source"], [617, "linkml-source"], [618, "linkml-source"], [619, "linkml-source"], [620, "linkml-source"], [621, "linkml-source"], [622, "linkml-source"], [623, "linkml-source"], [624, "linkml-source"], [625, "linkml-source"], [626, "linkml-source"], [627, "linkml-source"], [628, "linkml-source"], [629, "linkml-source"], [630, "linkml-source"], [631, "linkml-source"], [632, "linkml-source"], [633, "linkml-source"], [634, "linkml-source"], [635, "linkml-source"], [636, "linkml-source"], [637, "linkml-source"], [638, "linkml-source"], [639, "linkml-source"], [640, "linkml-source"], [641, "linkml-source"], [642, "linkml-source"], [643, "linkml-source"], [645, "linkml-source"], [646, "linkml-source"], [647, "linkml-source"], [648, "linkml-source"], [649, "linkml-source"], [650, "linkml-source"], [651, "linkml-source"], [652, "linkml-source"], [653, "linkml-source"], [654, "linkml-source"], [655, "linkml-source"], [656, "linkml-source"], [657, "linkml-source"], [658, "linkml-source"], [659, "linkml-source"], [660, "linkml-source"], [661, "linkml-source"], [662, "linkml-source"], [663, "linkml-source"], [664, "linkml-source"], [665, "linkml-source"], [666, "linkml-source"], [667, "linkml-source"], [668, "linkml-source"], [669, "linkml-source"], [670, "linkml-source"], [672, "linkml-source"], [673, "linkml-source"], [674, "linkml-source"], [675, "linkml-source"], [676, "linkml-source"], [678, "linkml-source"], [679, "linkml-source"], [687, "linkml-source"], [694, "linkml-source"], [695, "linkml-source"], [696, "linkml-source"], [697, "linkml-source"], [698, "linkml-source"], [700, "linkml-source"], [706, "linkml-source"], [707, "linkml-source"], [708, "linkml-source"], [709, "linkml-source"], [710, "linkml-source"], [711, "linkml-source"], [712, "linkml-source"], [713, "linkml-source"], [718, "linkml-source"], [720, "linkml-source"], [721, "linkml-source"], [722, "linkml-source"], [724, "linkml-source"], [725, "linkml-source"], [726, "linkml-source"], [727, "linkml-source"], [728, "linkml-source"], [729, "linkml-source"], [730, "linkml-source"], [731, "linkml-source"], [732, "linkml-source"], [733, "linkml-source"], [734, "linkml-source"], [735, "linkml-source"], [736, "linkml-source"], [738, "linkml-source"], [739, "linkml-source"], [740, "linkml-source"], [741, "linkml-source"], [742, "linkml-source"], [745, "linkml-source"], [763, "linkml-source"], [766, "linkml-source"], [767, "linkml-source"], [768, "linkml-source"], [773, "linkml-source"], [774, "linkml-source"], [775, "linkml-source"], [776, "linkml-source"], [777, "linkml-source"], [778, "linkml-source"], [779, "linkml-source"], [780, "linkml-source"], [781, "linkml-source"], [783, "linkml-source"], [784, "linkml-source"], [785, "linkml-source"], [786, "linkml-source"], [787, "linkml-source"], [788, "linkml-source"], [789, "linkml-source"], [790, "linkml-source"], [791, "linkml-source"], [792, "linkml-source"], [793, "linkml-source"], [794, "linkml-source"], [795, "linkml-source"], [796, "linkml-source"], [797, "linkml-source"], [798, "linkml-source"], [799, "linkml-source"], [800, "linkml-source"], [801, "linkml-source"], [802, "linkml-source"], [803, "linkml-source"], [804, "linkml-source"], [805, "linkml-source"], [806, "linkml-source"], [807, "linkml-source"], [808, "linkml-source"], [809, "linkml-source"], [810, "linkml-source"], [811, "linkml-source"], [813, "linkml-source"], [815, "linkml-source"], [817, "linkml-source"], [818, "linkml-source"], [819, "linkml-source"], [827, "linkml-source"], [830, "linkml-source"], [837, "linkml-source"], [841, "linkml-source"], [842, "linkml-source"], [844, "linkml-source"], [847, "linkml-source"], [848, "linkml-source"], [849, "linkml-source"], [850, "linkml-source"], [851, "linkml-source"], [856, "linkml-source"], [857, "linkml-source"], [858, "linkml-source"], [859, "linkml-source"], [862, "linkml-source"], [863, "linkml-source"], [864, "linkml-source"], [865, "linkml-source"], [866, "linkml-source"], [867, "linkml-source"], [868, "linkml-source"], [869, "linkml-source"], [870, "linkml-source"], [871, "linkml-source"], [872, "linkml-source"], [873, "linkml-source"], [874, "linkml-source"], [875, "linkml-source"], [876, "linkml-source"], [877, "linkml-source"], [878, "linkml-source"], [879, "linkml-source"], [881, "linkml-source"], [882, "linkml-source"], [883, "linkml-source"], [885, "linkml-source"], [886, "linkml-source"], [887, "linkml-source"], [888, "linkml-source"], [889, "linkml-source"], [890, "linkml-source"], [891, "linkml-source"], [892, "linkml-source"], [893, "linkml-source"], [894, "linkml-source"], [895, "linkml-source"], [896, "linkml-source"], [897, "linkml-source"], [898, "linkml-source"], [899, "linkml-source"], [900, "linkml-source"], [901, "linkml-source"], [902, "linkml-source"], [903, "linkml-source"], [904, "linkml-source"], [905, "linkml-source"], [906, "linkml-source"], [907, "linkml-source"], [908, "linkml-source"], [909, "linkml-source"], [910, "linkml-source"], [911, "linkml-source"], [913, "linkml-source"], [914, "linkml-source"], [915, "linkml-source"], [917, "linkml-source"], [918, "linkml-source"], [919, "linkml-source"], [920, "linkml-source"], [921, "linkml-source"], [922, "linkml-source"], [924, "linkml-source"], [938, "linkml-source"], [941, "linkml-source"], [942, "linkml-source"], [943, "linkml-source"], [944, "linkml-source"], [948, "linkml-source"], [949, "linkml-source"], [950, "linkml-source"], [951, "linkml-source"], [952, "linkml-source"], [953, "linkml-source"], [954, "linkml-source"], [956, "linkml-source"], [957, "linkml-source"], [958, "linkml-source"], [959, "linkml-source"], [960, "linkml-source"], [961, "linkml-source"], [962, "linkml-source"], [963, "linkml-source"], [964, "linkml-source"], [965, "linkml-source"], [966, "linkml-source"], [967, "linkml-source"], [968, "linkml-source"], [970, "linkml-source"], [971, "linkml-source"], [980, "linkml-source"], [990, "linkml-source"], [991, "linkml-source"], [992, "linkml-source"], [993, "linkml-source"], [995, "linkml-source"], [998, "linkml-source"], [999, "linkml-source"], [1000, "linkml-source"], [1001, "linkml-source"], [1002, "linkml-source"], [1004, "linkml-source"], [1005, "linkml-source"], [1006, "linkml-source"], [1007, "linkml-source"], [1008, "linkml-source"], [1009, "linkml-source"], [1010, "linkml-source"], [1011, "linkml-source"], [1012, "linkml-source"], [1013, "linkml-source"], [1014, "linkml-source"], [1015, "linkml-source"], [1016, "linkml-source"], [1017, "linkml-source"], [1018, "linkml-source"], [1019, "linkml-source"], [1020, "linkml-source"], [1021, "linkml-source"], [1022, "linkml-source"], [1023, "linkml-source"], [1024, "linkml-source"], [1025, "linkml-source"], [1027, "linkml-source"], [1030, "linkml-source"], [1037, "linkml-source"], [1042, "linkml-source"], [1043, "linkml-source"], [1045, "linkml-source"], [1048, "linkml-source"], [1049, "linkml-source"], [1050, "linkml-source"], [1051, "linkml-source"], [1052, "linkml-source"], [1053, "linkml-source"], [1057, "linkml-source"], [1060, "linkml-source"], [1061, "linkml-source"], [1062, "linkml-source"], [1063, "linkml-source"], [1064, "linkml-source"], [1065, "linkml-source"], [1066, "linkml-source"], [1067, "linkml-source"], [1068, "linkml-source"], [1070, "linkml-source"], [1071, "linkml-source"], [1072, "linkml-source"], [1073, "linkml-source"], [1074, "linkml-source"], [1075, "linkml-source"], [1076, "linkml-source"], [1077, "linkml-source"], [1078, "linkml-source"], [1079, "linkml-source"], [1080, "linkml-source"], [1081, "linkml-source"], [1082, "linkml-source"], [1083, "linkml-source"], [1084, "linkml-source"], [1085, "linkml-source"], [1086, "linkml-source"], [1087, "linkml-source"], [1088, "linkml-source"], [1089, "linkml-source"], [1090, "linkml-source"], [1091, "linkml-source"], [1092, "linkml-source"], [1093, "linkml-source"], [1094, "linkml-source"], [1095, "linkml-source"], [1096, "linkml-source"], [1098, "linkml-source"], [1099, "linkml-source"]], "Direct": [[3, "direct"], [4, "direct"], [17, "direct"], [20, "direct"], [21, "direct"], [22, "direct"], [23, "direct"], [24, "direct"], [94, "direct"], [95, "direct"], [96, "direct"], [155, "direct"], [159, "direct"], [214, "direct"], [215, "direct"], [219, "direct"], [225, "direct"], [251, "direct"], [252, "direct"], [264, "direct"], [265, "direct"], [266, "direct"], [267, "direct"], [271, "direct"], [296, "direct"], [297, "direct"], [309, "direct"], [310, "direct"], [311, "direct"], [312, "direct"], [313, "direct"], [314, "direct"], [318, "direct"], [319, "direct"], [320, "direct"], [323, "direct"], [324, "direct"], [374, "direct"], [375, "direct"], [382, "direct"], [383, "direct"], [384, "direct"], [386, "direct"], [387, "direct"], [388, "direct"], [390, "direct"], [391, "direct"], [395, "direct"], [396, "direct"], [398, "direct"], [404, "direct"], [405, "direct"], [407, "direct"], [412, "direct"], [413, "direct"], [414, "direct"], [419, "direct"], [478, "direct"], [481, "direct"], [482, "direct"], [483, "direct"], [484, "direct"], [485, "direct"], [486, "direct"], [487, "direct"], [490, "direct"], [491, "direct"], [499, "direct"], [504, "direct"], [505, "direct"], [506, "direct"], [507, "direct"], [508, "direct"], [509, "direct"], [510, "direct"], [511, "direct"], [514, "direct"], [523, "direct"], [524, "direct"], [528, "direct"], [532, "direct"], [534, "direct"], [535, "direct"], [537, "direct"], [538, "direct"], [539, "direct"], [542, "direct"], [543, "direct"], [544, "direct"], [547, "direct"], [679, "direct"], [694, "direct"], [695, "direct"], [697, "direct"], [698, "direct"], [745, "direct"], [763, "direct"], [766, "direct"], [767, "direct"], [768, "direct"], [815, "direct"], [817, "direct"], [818, "direct"], [819, "direct"], [826, "direct"], [827, "direct"], [829, "direct"], [830, "direct"], [837, "direct"], [840, "direct"], [841, "direct"], [842, "direct"], [844, "direct"], [938, "direct"], [941, "direct"], [942, "direct"], [943, "direct"], [944, "direct"], [980, "direct"], [990, "direct"], [991, "direct"], [992, "direct"], [993, "direct"], [1030, "direct"], [1037, "direct"], [1042, "direct"], [1043, "direct"], [1045, "direct"], [1048, "direct"], [1049, "direct"], [1050, "direct"], [1051, "direct"], [1052, "direct"], [1057, "direct"], [1060, "direct"], [1061, "direct"], [1062, "direct"]], "Class: AssociationChange": [[4, "class-associationchange"]], "Comments": [[4, "comments"], [6, "comments"], [19, "comments"], [28, "comments"], [61, "comments"], [78, "comments"], [86, "comments"], [97, "comments"], [109, "comments"], [115, "comments"], [137, "comments"], [153, "comments"], [161, "comments"], [206, "comments"], [215, "comments"], [222, "comments"], [227, "comments"], [230, "comments"], [254, "comments"], [270, "comments"], [276, "comments"], [299, "comments"], [317, "comments"], [327, "comments"], [354, "comments"], [377, "comments"], [384, "comments"], [388, "comments"], [391, "comments"], [401, "comments"], [407, "comments"], [417, "comments"], [424, "comments"], [426, "comments"], [433, "comments"], [436, "comments"], [443, "comments"], [454, "comments"], [462, "comments"], [492, "comments"], [509, "comments"], [533, "comments"], [549, "comments"], [562, "comments"], [565, "comments"], [577, "comments"], [598, "comments"], [605, "comments"], [627, "comments"], [667, "comments"], [680, "comments"], [693, "comments"], [704, "comments"], [739, "comments"], [747, "comments"], [762, "comments"], [770, "comments"], [787, "comments"], [820, "comments"], [827, "comments"], [836, "comments"], [845, "comments"], [891, "comments"], [903, "comments"], [925, "comments"], [937, "comments"], [946, "comments"], [958, "comments"], [967, "comments"], [973, "comments"], [986, "comments"], [996, "comments"], [1031, "comments"], [1047, "comments"], [1058, "comments"]], "Type: Boolean": [[5, "type-boolean"], [93, "type-boolean"], [136, "type-boolean"], [205, "type-boolean"], [253, "type-boolean"], [298, "type-boolean"], [376, "type-boolean"], [488, "type-boolean"], [677, "type-boolean"], [746, "type-boolean"], [816, "type-boolean"], [923, "type-boolean"], [972, "type-boolean"], [1029, "type-boolean"]], "Type: Curie": [[6, "type-curie"], [97, "type-curie"], [137, "type-curie"], [206, "type-curie"], [254, "type-curie"], [299, "type-curie"], [377, "type-curie"], [492, "type-curie"], [680, "type-curie"], [747, "type-curie"], [820, "type-curie"], [925, "type-curie"], [973, "type-curie"], [1031, "type-curie"]], "Type: Date": [[7, "type-date"], [98, "type-date"], [138, "type-date"], [207, "type-date"], [255, "type-date"], [300, "type-date"], [378, "type-date"], [493, "type-date"], [681, "type-date"], [748, "type-date"], [821, "type-date"], [926, "type-date"], [974, "type-date"], [1032, "type-date"]], "Type: DateOrDatetime": [[8, "type-dateordatetime"], [99, "type-dateordatetime"], [139, "type-dateordatetime"], [208, "type-dateordatetime"], [256, "type-dateordatetime"], [301, "type-dateordatetime"], [379, "type-dateordatetime"], [494, "type-dateordatetime"], [682, "type-dateordatetime"], [749, "type-dateordatetime"], [822, "type-dateordatetime"], [927, "type-dateordatetime"], [975, "type-dateordatetime"], [1033, "type-dateordatetime"]], "Type: Datetime": [[9, "type-datetime"], [100, "type-datetime"], [140, "type-datetime"], [209, "type-datetime"], [257, "type-datetime"], [302, "type-datetime"], [380, "type-datetime"], [495, "type-datetime"], [683, "type-datetime"], [750, "type-datetime"], [823, "type-datetime"], [928, "type-datetime"], [976, "type-datetime"], [1034, "type-datetime"]], "Type: Decimal": [[10, "type-decimal"], [101, "type-decimal"], [141, "type-decimal"], [210, "type-decimal"], [258, "type-decimal"], [303, "type-decimal"], [381, "type-decimal"], [496, "type-decimal"], [684, "type-decimal"], [751, "type-decimal"], [824, "type-decimal"], [929, "type-decimal"], [977, "type-decimal"], [1035, "type-decimal"]], "Type: Double": [[11, "type-double"], [102, "type-double"], [143, "type-double"], [211, "type-double"], [259, "type-double"], [304, "type-double"], [385, "type-double"], [498, "type-double"], [685, "type-double"], [752, "type-double"], [825, "type-double"], [930, "type-double"], [978, "type-double"], [1036, "type-double"]], "Type: Float": [[12, "type-float"], [103, "type-float"], [145, "type-float"], [212, "type-float"], [260, "type-float"], [305, "type-float"], [389, "type-float"], [500, "type-float"], [686, "type-float"], [753, "type-float"], [828, "type-float"], [931, "type-float"], [979, "type-float"], [1038, "type-float"]], "Type: Integer": [[13, "type-integer"], [104, "type-integer"], [146, "type-integer"], [213, "type-integer"], [261, "type-integer"], [306, "type-integer"], [392, "type-integer"], [515, "type-integer"], [688, "type-integer"], [754, "type-integer"], [831, "type-integer"], [932, "type-integer"], [981, "type-integer"], [1039, "type-integer"]], "Type: Jsonpath": [[14, "type-jsonpath"], [105, "type-jsonpath"], [147, "type-jsonpath"], [217, "type-jsonpath"], [262, "type-jsonpath"], [307, "type-jsonpath"], [393, "type-jsonpath"], [517, "type-jsonpath"], [689, "type-jsonpath"], [756, "type-jsonpath"], [832, "type-jsonpath"], [933, "type-jsonpath"], [982, "type-jsonpath"], [1040, "type-jsonpath"]], "Type: Jsonpointer": [[15, "type-jsonpointer"], [106, "type-jsonpointer"], [148, "type-jsonpointer"], [218, "type-jsonpointer"], [263, "type-jsonpointer"], [308, "type-jsonpointer"], [394, "type-jsonpointer"], [518, "type-jsonpointer"], [690, "type-jsonpointer"], [757, "type-jsonpointer"], [833, "type-jsonpointer"], [934, "type-jsonpointer"], [983, "type-jsonpointer"], [1041, "type-jsonpointer"]], "Type: Ncname": [[16, "type-ncname"], [107, "type-ncname"], [151, "type-ncname"], [220, "type-ncname"], [268, "type-ncname"], [315, "type-ncname"], [397, "type-ncname"], [526, "type-ncname"], [691, "type-ncname"], [758, "type-ncname"], [834, "type-ncname"], [935, "type-ncname"], [984, "type-ncname"], [1044, "type-ncname"]], "Class: NegatedAssociation": [[17, "class-negatedassociation"]], "Type: Nodeidentifier": [[18, "type-nodeidentifier"], [108, "type-nodeidentifier"], [152, "type-nodeidentifier"], [221, "type-nodeidentifier"], [269, "type-nodeidentifier"], [316, "type-nodeidentifier"], [400, "type-nodeidentifier"], [527, "type-nodeidentifier"], [692, "type-nodeidentifier"], [760, "type-nodeidentifier"], [835, "type-nodeidentifier"], [936, "type-nodeidentifier"], [985, "type-nodeidentifier"], [1046, "type-nodeidentifier"]], "Type: Objectidentifier": [[19, "type-objectidentifier"], [109, "type-objectidentifier"], [153, "type-objectidentifier"], [222, "type-objectidentifier"], [270, "type-objectidentifier"], [317, "type-objectidentifier"], [401, "type-objectidentifier"], [533, "type-objectidentifier"], [693, "type-objectidentifier"], [762, "type-objectidentifier"], [836, "type-objectidentifier"], [937, "type-objectidentifier"], [986, "type-objectidentifier"], [1047, "type-objectidentifier"]], "Class: PairwiseCoAssociation": [[20, "class-pairwisecoassociation"]], "Class: ParserConfiguration": [[21, "class-parserconfiguration"]], "Class: PositiveOrNegativeAssociation": [[22, "class-positiveornegativeassociation"]], "Class: PropertyValue": [[23, "class-propertyvalue"], [407, "class-propertyvalue"]], "Class: RollupGroup": [[24, "class-rollupgroup"]], "Type: Sparqlpath": [[25, "type-sparqlpath"], [112, "type-sparqlpath"], [157, "type-sparqlpath"], [223, "type-sparqlpath"], [272, "type-sparqlpath"], [321, "type-sparqlpath"], [410, "type-sparqlpath"], [540, "type-sparqlpath"], [701, "type-sparqlpath"], [764, "type-sparqlpath"], [838, "type-sparqlpath"], [939, "type-sparqlpath"], [988, "type-sparqlpath"], [1054, "type-sparqlpath"]], "Type: String": [[26, "type-string"], [113, "type-string"], [158, "type-string"], [224, "type-string"], [273, "type-string"], [322, "type-string"], [411, "type-string"], [541, "type-string"], [702, "type-string"], [765, "type-string"], [839, "type-string"], [940, "type-string"], [989, "type-string"], [1055, "type-string"]], "Type: Time": [[27, "type-time"], [114, "type-time"], [160, "type-time"], [226, "type-time"], [274, "type-time"], [325, "type-time"], [416, "type-time"], [546, "type-time"], [703, "type-time"], [769, "type-time"], [843, "type-time"], [945, "type-time"], [994, "type-time"], [1056, "type-time"]], "Type: Uri": [[28, "type-uri"], [115, "type-uri"], [161, "type-uri"], [227, "type-uri"], [276, "type-uri"], [327, "type-uri"], [417, "type-uri"], [549, "type-uri"], [704, "type-uri"], [770, "type-uri"], [845, "type-uri"], [946, "type-uri"], [996, "type-uri"], [1058, "type-uri"]], "Type: Uriorcurie": [[29, "type-uriorcurie"], [116, "type-uriorcurie"], [162, "type-uriorcurie"], [228, "type-uriorcurie"], [277, "type-uriorcurie"], [328, "type-uriorcurie"], [418, "type-uriorcurie"], [550, "type-uriorcurie"], [705, "type-uriorcurie"], [771, "type-uriorcurie"], [846, "type-uriorcurie"], [947, "type-uriorcurie"], [997, "type-uriorcurie"], [1059, "type-uriorcurie"]], "Slot: aggregator_knowledge_source": [[30, "slot-aggregator-knowledge-source"]], "Applicable Classes": [[30, "applicable-classes"], [32, "applicable-classes"], [33, "applicable-classes"], [34, "applicable-classes"], [36, "applicable-classes"], [37, "applicable-classes"], [43, "applicable-classes"], [44, "applicable-classes"], [45, "applicable-classes"], [47, "applicable-classes"], [48, "applicable-classes"], [49, "applicable-classes"], [50, "applicable-classes"], [51, "applicable-classes"], [53, "applicable-classes"], [54, "applicable-classes"], [55, "applicable-classes"], [56, "applicable-classes"], [57, "applicable-classes"], [58, "applicable-classes"], [59, "applicable-classes"], [60, "applicable-classes"], [61, "applicable-classes"], [62, "applicable-classes"], [63, "applicable-classes"], [64, "applicable-classes"], [65, "applicable-classes"], [66, "applicable-classes"], [67, "applicable-classes"], [68, "applicable-classes"], [69, "applicable-classes"], [70, "applicable-classes"], [71, "applicable-classes"], [72, "applicable-classes"], [76, "applicable-classes"], [77, "applicable-classes"], [78, "applicable-classes"], [79, "applicable-classes"], [80, "applicable-classes"], [81, "applicable-classes"], [82, "applicable-classes"], [83, "applicable-classes"], [84, "applicable-classes"], [85, "applicable-classes"], [86, "applicable-classes"], [87, "applicable-classes"], [88, "applicable-classes"], [89, "applicable-classes"], [90, "applicable-classes"], [91, "applicable-classes"], [92, "applicable-classes"], [117, "applicable-classes"], [118, "applicable-classes"], [119, "applicable-classes"], [121, "applicable-classes"], [122, "applicable-classes"], [123, "applicable-classes"], [124, "applicable-classes"], [125, "applicable-classes"], [126, "applicable-classes"], [128, "applicable-classes"], [129, "applicable-classes"], [130, "applicable-classes"], [131, "applicable-classes"], [132, "applicable-classes"], [133, "applicable-classes"], [134, "applicable-classes"], [135, "applicable-classes"], [163, "applicable-classes"], [168, "applicable-classes"], [169, "applicable-classes"], [170, "applicable-classes"], [172, "applicable-classes"], [173, "applicable-classes"], [176, "applicable-classes"], [177, "applicable-classes"], [178, "applicable-classes"], [179, "applicable-classes"], [182, "applicable-classes"], [183, "applicable-classes"], [185, "applicable-classes"], [186, "applicable-classes"], [187, "applicable-classes"], [188, "applicable-classes"], [190, "applicable-classes"], [191, "applicable-classes"], [194, "applicable-classes"], [195, "applicable-classes"], [196, "applicable-classes"], [200, "applicable-classes"], [201, "applicable-classes"], [229, "applicable-classes"], [230, "applicable-classes"], [231, "applicable-classes"], [232, "applicable-classes"], [233, "applicable-classes"], [234, "applicable-classes"], [235, "applicable-classes"], [237, "applicable-classes"], [239, "applicable-classes"], [240, "applicable-classes"], [241, "applicable-classes"], [242, "applicable-classes"], [243, "applicable-classes"], [244, "applicable-classes"], [245, "applicable-classes"], [246, "applicable-classes"], [247, "applicable-classes"], [248, "applicable-classes"], [249, "applicable-classes"], [278, "applicable-classes"], [279, "applicable-classes"], [280, "applicable-classes"], [284, "applicable-classes"], [285, "applicable-classes"], [286, "applicable-classes"], [287, "applicable-classes"], [288, "applicable-classes"], [289, "applicable-classes"], [290, "applicable-classes"], [291, "applicable-classes"], [292, "applicable-classes"], [293, "applicable-classes"], [294, "applicable-classes"], [329, "applicable-classes"], [330, "applicable-classes"], [331, "applicable-classes"], [332, "applicable-classes"], [334, "applicable-classes"], [339, "applicable-classes"], [340, "applicable-classes"], [341, "applicable-classes"], [342, "applicable-classes"], [343, "applicable-classes"], [344, "applicable-classes"], [345, "applicable-classes"], [346, "applicable-classes"], [347, "applicable-classes"], [348, "applicable-classes"], [349, "applicable-classes"], [350, "applicable-classes"], [351, "applicable-classes"], [352, "applicable-classes"], [353, "applicable-classes"], [354, "applicable-classes"], [355, "applicable-classes"], [356, "applicable-classes"], [357, "applicable-classes"], [358, "applicable-classes"], [359, "applicable-classes"], [360, "applicable-classes"], [361, "applicable-classes"], [362, "applicable-classes"], [363, "applicable-classes"], [364, "applicable-classes"], [365, "applicable-classes"], [366, "applicable-classes"], [367, "applicable-classes"], [368, "applicable-classes"], [369, "applicable-classes"], [370, "applicable-classes"], [371, "applicable-classes"], [373, "applicable-classes"], [421, "applicable-classes"], [422, "applicable-classes"], [423, "applicable-classes"], [424, "applicable-classes"], [425, "applicable-classes"], [426, "applicable-classes"], [427, "applicable-classes"], [428, "applicable-classes"], [429, "applicable-classes"], [431, "applicable-classes"], [432, "applicable-classes"], [433, "applicable-classes"], [434, "applicable-classes"], [435, "applicable-classes"], [436, "applicable-classes"], [437, "applicable-classes"], [438, "applicable-classes"], [440, "applicable-classes"], [442, "applicable-classes"], [443, "applicable-classes"], [444, "applicable-classes"], [445, "applicable-classes"], [446, "applicable-classes"], [447, "applicable-classes"], [448, "applicable-classes"], [449, "applicable-classes"], [452, "applicable-classes"], [453, "applicable-classes"], [454, "applicable-classes"], [455, "applicable-classes"], [456, "applicable-classes"], [457, "applicable-classes"], [458, "applicable-classes"], [459, "applicable-classes"], [460, "applicable-classes"], [462, "applicable-classes"], [464, "applicable-classes"], [465, "applicable-classes"], [466, "applicable-classes"], [467, "applicable-classes"], [468, "applicable-classes"], [469, "applicable-classes"], [470, "applicable-classes"], [472, "applicable-classes"], [473, "applicable-classes"], [474, "applicable-classes"], [475, "applicable-classes"], [476, "applicable-classes"], [477, "applicable-classes"], [512, "applicable-classes"], [513, "applicable-classes"], [529, "applicable-classes"], [551, "applicable-classes"], [552, "applicable-classes"], [553, "applicable-classes"], [554, "applicable-classes"], [555, "applicable-classes"], [556, "applicable-classes"], [557, "applicable-classes"], [558, "applicable-classes"], [559, "applicable-classes"], [561, "applicable-classes"], [562, "applicable-classes"], [563, "applicable-classes"], [564, "applicable-classes"], [565, "applicable-classes"], [566, "applicable-classes"], [568, "applicable-classes"], [569, "applicable-classes"], [570, "applicable-classes"], [571, "applicable-classes"], [572, "applicable-classes"], [573, "applicable-classes"], [574, "applicable-classes"], [575, "applicable-classes"], [577, "applicable-classes"], [578, "applicable-classes"], [579, "applicable-classes"], [580, "applicable-classes"], [581, "applicable-classes"], [582, "applicable-classes"], [584, "applicable-classes"], [585, "applicable-classes"], [586, "applicable-classes"], [587, "applicable-classes"], [588, "applicable-classes"], [589, "applicable-classes"], [590, "applicable-classes"], [591, "applicable-classes"], [593, "applicable-classes"], [594, "applicable-classes"], [595, "applicable-classes"], [596, "applicable-classes"], [598, "applicable-classes"], [599, "applicable-classes"], [600, "applicable-classes"], [601, "applicable-classes"], [602, "applicable-classes"], [603, "applicable-classes"], [604, "applicable-classes"], [605, "applicable-classes"], [606, "applicable-classes"], [607, "applicable-classes"], [608, "applicable-classes"], [609, "applicable-classes"], [610, "applicable-classes"], [611, "applicable-classes"], [612, "applicable-classes"], [613, "applicable-classes"], [614, "applicable-classes"], [617, "applicable-classes"], [618, "applicable-classes"], [619, "applicable-classes"], [620, "applicable-classes"], [621, "applicable-classes"], [622, "applicable-classes"], [623, "applicable-classes"], [624, "applicable-classes"], [625, "applicable-classes"], [626, "applicable-classes"], [627, "applicable-classes"], [629, "applicable-classes"], [637, "applicable-classes"], [638, "applicable-classes"], [639, "applicable-classes"], [640, "applicable-classes"], [646, "applicable-classes"], [647, "applicable-classes"], [648, "applicable-classes"], [649, "applicable-classes"], [650, "applicable-classes"], [651, "applicable-classes"], [654, "applicable-classes"], [657, "applicable-classes"], [659, "applicable-classes"], [660, "applicable-classes"], [661, "applicable-classes"], [662, "applicable-classes"], [663, "applicable-classes"], [665, "applicable-classes"], [666, "applicable-classes"], [667, "applicable-classes"], [668, "applicable-classes"], [669, "applicable-classes"], [670, "applicable-classes"], [672, "applicable-classes"], [673, "applicable-classes"], [674, "applicable-classes"], [675, "applicable-classes"], [706, "applicable-classes"], [707, "applicable-classes"], [708, "applicable-classes"], [709, "applicable-classes"], [710, "applicable-classes"], [711, "applicable-classes"], [712, "applicable-classes"], [713, "applicable-classes"], [718, "applicable-classes"], [720, "applicable-classes"], [721, "applicable-classes"], [722, "applicable-classes"], [724, "applicable-classes"], [725, "applicable-classes"], [726, "applicable-classes"], [727, "applicable-classes"], [728, "applicable-classes"], [729, "applicable-classes"], [730, "applicable-classes"], [731, "applicable-classes"], [732, "applicable-classes"], [733, "applicable-classes"], [734, "applicable-classes"], [735, "applicable-classes"], [736, "applicable-classes"], [738, "applicable-classes"], [739, "applicable-classes"], [740, "applicable-classes"], [741, "applicable-classes"], [742, "applicable-classes"], [773, "applicable-classes"], [774, "applicable-classes"], [775, "applicable-classes"], [776, "applicable-classes"], [777, "applicable-classes"], [778, "applicable-classes"], [779, "applicable-classes"], [780, "applicable-classes"], [781, "applicable-classes"], [785, "applicable-classes"], [786, "applicable-classes"], [787, "applicable-classes"], [788, "applicable-classes"], [789, "applicable-classes"], [790, "applicable-classes"], [791, "applicable-classes"], [792, "applicable-classes"], [793, "applicable-classes"], [794, "applicable-classes"], [795, "applicable-classes"], [796, "applicable-classes"], [797, "applicable-classes"], [798, "applicable-classes"], [799, "applicable-classes"], [801, "applicable-classes"], [802, "applicable-classes"], [803, "applicable-classes"], [804, "applicable-classes"], [805, "applicable-classes"], [806, "applicable-classes"], [807, "applicable-classes"], [808, "applicable-classes"], [809, "applicable-classes"], [847, "applicable-classes"], [848, "applicable-classes"], [849, "applicable-classes"], [850, "applicable-classes"], [851, "applicable-classes"], [856, "applicable-classes"], [857, "applicable-classes"], [858, "applicable-classes"], [859, "applicable-classes"], [862, "applicable-classes"], [863, "applicable-classes"], [865, "applicable-classes"], [866, "applicable-classes"], [867, "applicable-classes"], [868, "applicable-classes"], [870, "applicable-classes"], [871, "applicable-classes"], [872, "applicable-classes"], [873, "applicable-classes"], [874, "applicable-classes"], [875, "applicable-classes"], [876, "applicable-classes"], [877, "applicable-classes"], [878, "applicable-classes"], [879, "applicable-classes"], [881, "applicable-classes"], [882, "applicable-classes"], [883, "applicable-classes"], [885, "applicable-classes"], [887, "applicable-classes"], [888, "applicable-classes"], [889, "applicable-classes"], [890, "applicable-classes"], [891, "applicable-classes"], [892, "applicable-classes"], [894, "applicable-classes"], [895, "applicable-classes"], [896, "applicable-classes"], [897, "applicable-classes"], [898, "applicable-classes"], [899, "applicable-classes"], [900, "applicable-classes"], [901, "applicable-classes"], [903, "applicable-classes"], [904, "applicable-classes"], [905, "applicable-classes"], [907, "applicable-classes"], [908, "applicable-classes"], [909, "applicable-classes"], [910, "applicable-classes"], [911, "applicable-classes"], [913, "applicable-classes"], [914, "applicable-classes"], [915, "applicable-classes"], [917, "applicable-classes"], [918, "applicable-classes"], [919, "applicable-classes"], [920, "applicable-classes"], [921, "applicable-classes"], [922, "applicable-classes"], [948, "applicable-classes"], [949, "applicable-classes"], [950, "applicable-classes"], [951, "applicable-classes"], [952, "applicable-classes"], [953, "applicable-classes"], [954, "applicable-classes"], [956, "applicable-classes"], [957, "applicable-classes"], [958, "applicable-classes"], [959, "applicable-classes"], [960, "applicable-classes"], [961, "applicable-classes"], [962, "applicable-classes"], [963, "applicable-classes"], [964, "applicable-classes"], [965, "applicable-classes"], [966, "applicable-classes"], [967, "applicable-classes"], [968, "applicable-classes"], [970, "applicable-classes"], [971, "applicable-classes"], [998, "applicable-classes"], [999, "applicable-classes"], [1000, "applicable-classes"], [1001, "applicable-classes"], [1002, "applicable-classes"], [1004, "applicable-classes"], [1005, "applicable-classes"], [1006, "applicable-classes"], [1007, "applicable-classes"], [1008, "applicable-classes"], [1009, "applicable-classes"], [1010, "applicable-classes"], [1011, "applicable-classes"], [1012, "applicable-classes"], [1013, "applicable-classes"], [1014, "applicable-classes"], [1015, "applicable-classes"], [1016, "applicable-classes"], [1017, "applicable-classes"], [1018, "applicable-classes"], [1019, "applicable-classes"], [1020, "applicable-classes"], [1021, "applicable-classes"], [1022, "applicable-classes"], [1023, "applicable-classes"], [1024, "applicable-classes"], [1025, "applicable-classes"], [1027, "applicable-classes"], [1064, "applicable-classes"], [1065, "applicable-classes"], [1066, "applicable-classes"], [1067, "applicable-classes"], [1068, "applicable-classes"], [1070, "applicable-classes"], [1071, "applicable-classes"], [1072, "applicable-classes"], [1073, "applicable-classes"], [1074, "applicable-classes"], [1075, "applicable-classes"], [1076, "applicable-classes"], [1077, "applicable-classes"], [1078, "applicable-classes"], [1079, "applicable-classes"], [1080, "applicable-classes"], [1081, "applicable-classes"], [1082, "applicable-classes"], [1083, "applicable-classes"], [1084, "applicable-classes"], [1085, "applicable-classes"], [1086, "applicable-classes"], [1087, "applicable-classes"], [1088, "applicable-classes"], [1089, "applicable-classes"], [1090, "applicable-classes"], [1091, "applicable-classes"], [1092, "applicable-classes"], [1093, "applicable-classes"], [1094, "applicable-classes"], [1095, "applicable-classes"], [1096, "applicable-classes"], [1098, "applicable-classes"], [1099, "applicable-classes"]], "Properties": [[30, "properties"], [32, "properties"], [33, "properties"], [34, "properties"], [35, "properties"], [36, "properties"], [37, "properties"], [38, "properties"], [39, "properties"], [40, "properties"], [41, "properties"], [42, "properties"], [43, "properties"], [44, "properties"], [45, "properties"], [47, "properties"], [48, "properties"], [49, "properties"], [50, "properties"], [51, "properties"], [52, "properties"], [53, "properties"], [54, "properties"], [55, "properties"], [56, "properties"], [57, "properties"], [58, "properties"], [59, "properties"], [60, "properties"], [61, "properties"], [62, "properties"], [63, "properties"], [64, "properties"], [65, "properties"], [66, "properties"], [67, "properties"], [68, "properties"], [69, "properties"], [70, "properties"], [71, "properties"], [72, "properties"], [73, "properties"], [74, "properties"], [75, "properties"], [76, "properties"], [77, "properties"], [78, "properties"], [79, "properties"], [80, "properties"], [81, "properties"], [82, "properties"], [83, "properties"], [84, "properties"], [85, "properties"], [86, "properties"], [87, "properties"], [88, "properties"], [89, "properties"], [90, "properties"], [91, "properties"], [92, "properties"], [117, "properties"], [118, "properties"], [119, "properties"], [121, "properties"], [122, "properties"], [123, "properties"], [124, "properties"], [125, "properties"], [126, "properties"], [128, "properties"], [129, "properties"], [130, "properties"], [131, "properties"], [132, "properties"], [133, "properties"], [134, "properties"], [135, "properties"], [163, "properties"], [166, "properties"], [167, "properties"], [168, "properties"], [169, "properties"], [170, "properties"], [171, "properties"], [172, "properties"], [173, "properties"], [174, "properties"], [175, "properties"], [176, "properties"], [177, "properties"], [178, "properties"], [179, "properties"], [180, "properties"], [181, "properties"], [182, "properties"], [183, "properties"], [184, "properties"], [185, "properties"], [186, "properties"], [187, "properties"], [188, "properties"], [189, "properties"], [190, "properties"], [191, "properties"], [192, "properties"], [193, "properties"], [194, "properties"], [195, "properties"], [196, "properties"], [197, "properties"], [198, "properties"], [199, "properties"], [200, "properties"], [201, "properties"], [229, "properties"], [230, "properties"], [231, "properties"], [232, "properties"], [233, "properties"], [234, "properties"], [235, "properties"], [237, "properties"], [239, "properties"], [240, "properties"], [241, "properties"], [242, "properties"], [243, "properties"], [244, "properties"], [245, "properties"], [246, "properties"], [247, "properties"], [248, "properties"], [249, "properties"], [278, "properties"], [279, "properties"], [280, "properties"], [284, "properties"], [285, "properties"], [286, "properties"], [287, "properties"], [288, "properties"], [289, "properties"], [290, "properties"], [291, "properties"], [292, "properties"], [293, "properties"], [294, "properties"], [329, "properties"], [330, "properties"], [331, "properties"], [332, "properties"], [334, "properties"], [339, "properties"], [340, "properties"], [341, "properties"], [342, "properties"], [343, "properties"], [344, "properties"], [345, "properties"], [346, "properties"], [347, "properties"], [348, "properties"], [349, "properties"], [350, "properties"], [351, "properties"], [352, "properties"], [353, "properties"], [354, "properties"], [355, "properties"], [356, "properties"], [357, "properties"], [358, "properties"], [359, "properties"], [360, "properties"], [361, "properties"], [362, "properties"], [363, "properties"], [364, "properties"], [365, "properties"], [366, "properties"], [367, "properties"], [368, "properties"], [369, "properties"], [370, "properties"], [371, "properties"], [373, "properties"], [421, "properties"], [422, "properties"], [423, "properties"], [424, "properties"], [425, "properties"], [426, "properties"], [427, "properties"], [428, "properties"], [429, "properties"], [430, "properties"], [431, "properties"], [432, "properties"], [433, "properties"], [434, "properties"], [435, "properties"], [436, "properties"], [437, "properties"], [438, "properties"], [440, "properties"], [441, "properties"], [442, "properties"], [443, "properties"], [444, "properties"], [445, "properties"], [446, "properties"], [447, "properties"], [448, "properties"], [449, "properties"], [452, "properties"], [453, "properties"], [454, "properties"], [455, "properties"], [456, "properties"], [457, "properties"], [458, "properties"], [459, "properties"], [460, "properties"], [461, "properties"], [462, "properties"], [463, "properties"], [464, "properties"], [465, "properties"], [466, "properties"], [467, "properties"], [468, "properties"], [469, "properties"], [470, "properties"], [472, "properties"], [473, "properties"], [474, "properties"], [475, "properties"], [476, "properties"], [477, "properties"], [512, "properties"], [513, "properties"], [520, "properties"], [521, "properties"], [522, "properties"], [529, "properties"], [551, "properties"], [552, "properties"], [553, "properties"], [554, "properties"], [555, "properties"], [556, "properties"], [557, "properties"], [558, "properties"], [559, "properties"], [560, "properties"], [561, "properties"], [562, "properties"], [563, "properties"], [564, "properties"], [565, "properties"], [566, "properties"], [567, "properties"], [568, "properties"], [569, "properties"], [570, "properties"], [571, "properties"], [572, "properties"], [573, "properties"], [574, "properties"], [575, "properties"], [576, "properties"], [577, "properties"], [578, "properties"], [579, "properties"], [580, "properties"], [581, "properties"], [582, "properties"], [583, "properties"], [584, "properties"], [585, "properties"], [586, "properties"], [587, "properties"], [588, "properties"], [589, "properties"], [590, "properties"], [591, "properties"], [592, "properties"], [593, "properties"], [594, "properties"], [595, "properties"], [596, "properties"], [597, "properties"], [598, "properties"], [599, "properties"], [600, "properties"], [601, "properties"], [602, "properties"], [603, "properties"], [604, "properties"], [605, "properties"], [606, "properties"], [607, "properties"], [608, "properties"], [609, "properties"], [610, "properties"], [611, "properties"], [612, "properties"], [613, "properties"], [614, "properties"], [616, "properties"], [617, "properties"], [618, "properties"], [619, "properties"], [620, "properties"], [621, "properties"], [622, "properties"], [623, "properties"], [624, "properties"], [625, "properties"], [626, "properties"], [627, "properties"], [628, "properties"], [629, "properties"], [630, "properties"], [631, "properties"], [632, "properties"], [633, "properties"], [634, "properties"], [635, "properties"], [636, "properties"], [637, "properties"], [638, "properties"], [639, "properties"], [640, "properties"], [641, "properties"], [642, "properties"], [643, "properties"], [645, "properties"], [646, "properties"], [647, "properties"], [648, "properties"], [649, "properties"], [650, "properties"], [651, "properties"], [652, "properties"], [653, "properties"], [654, "properties"], [655, "properties"], [656, "properties"], [657, "properties"], [658, "properties"], [659, "properties"], [660, "properties"], [661, "properties"], [662, "properties"], [663, "properties"], [664, "properties"], [665, "properties"], [666, "properties"], [667, "properties"], [668, "properties"], [669, "properties"], [670, "properties"], [672, "properties"], [673, "properties"], [674, "properties"], [675, "properties"], [676, "properties"], [706, "properties"], [707, "properties"], [708, "properties"], [709, "properties"], [710, "properties"], [711, "properties"], [712, "properties"], [713, "properties"], [714, "properties"], [715, "properties"], [716, "properties"], [717, "properties"], [718, "properties"], [720, "properties"], [721, "properties"], [722, "properties"], [723, "properties"], [724, "properties"], [725, "properties"], [726, "properties"], [727, "properties"], [728, "properties"], [729, "properties"], [730, "properties"], [731, "properties"], [732, "properties"], [733, "properties"], [734, "properties"], [735, "properties"], [736, "properties"], [738, "properties"], [739, "properties"], [740, "properties"], [741, "properties"], [742, "properties"], [773, "properties"], [774, "properties"], [775, "properties"], [776, "properties"], [777, "properties"], [778, "properties"], [779, "properties"], [780, "properties"], [781, "properties"], [783, "properties"], [784, "properties"], [785, "properties"], [786, "properties"], [787, "properties"], [788, "properties"], [789, "properties"], [790, "properties"], [791, "properties"], [792, "properties"], [793, "properties"], [794, "properties"], [795, "properties"], [796, "properties"], [797, "properties"], [798, "properties"], [799, "properties"], [800, "properties"], [801, "properties"], [802, "properties"], [803, "properties"], [804, "properties"], [805, "properties"], [806, "properties"], [807, "properties"], [808, "properties"], [809, "properties"], [810, "properties"], [811, "properties"], [813, "properties"], [847, "properties"], [848, "properties"], [849, "properties"], [850, "properties"], [851, "properties"], [852, "properties"], [853, "properties"], [854, "properties"], [855, "properties"], [856, "properties"], [857, "properties"], [858, "properties"], [859, "properties"], [860, "properties"], [861, "properties"], [862, "properties"], [863, "properties"], [864, "properties"], [865, "properties"], [866, "properties"], [867, "properties"], [868, "properties"], [869, "properties"], [870, "properties"], [871, "properties"], [872, "properties"], [873, "properties"], [874, "properties"], [875, "properties"], [876, "properties"], [877, "properties"], [878, "properties"], [879, "properties"], [880, "properties"], [881, "properties"], [882, "properties"], [883, "properties"], [885, "properties"], [886, "properties"], [887, "properties"], [888, "properties"], [889, "properties"], [890, "properties"], [891, "properties"], [892, "properties"], [893, "properties"], [894, "properties"], [895, "properties"], [896, "properties"], [897, "properties"], [898, "properties"], [899, "properties"], [900, "properties"], [901, "properties"], [902, "properties"], [903, "properties"], [904, "properties"], [905, "properties"], [906, "properties"], [907, "properties"], [908, "properties"], [909, "properties"], [910, "properties"], [911, "properties"], [913, "properties"], [914, "properties"], [915, "properties"], [917, "properties"], [918, "properties"], [919, "properties"], [920, "properties"], [921, "properties"], [922, "properties"], [948, "properties"], [949, "properties"], [950, "properties"], [951, "properties"], [952, "properties"], [953, "properties"], [954, "properties"], [956, "properties"], [957, "properties"], [958, "properties"], [959, "properties"], [960, "properties"], [961, "properties"], [962, "properties"], [963, "properties"], [964, "properties"], [965, "properties"], [966, "properties"], [967, "properties"], [968, "properties"], [970, "properties"], [971, "properties"], [998, "properties"], [999, "properties"], [1000, "properties"], [1001, "properties"], [1002, "properties"], [1004, "properties"], [1005, "properties"], [1006, "properties"], [1007, "properties"], [1008, "properties"], [1009, "properties"], [1010, "properties"], [1011, "properties"], [1012, "properties"], [1013, "properties"], [1014, "properties"], [1015, "properties"], [1016, "properties"], [1017, "properties"], [1018, "properties"], [1019, "properties"], [1020, "properties"], [1021, "properties"], [1022, "properties"], [1023, "properties"], [1024, "properties"], [1025, "properties"], [1027, "properties"], [1064, "properties"], [1065, "properties"], [1066, "properties"], [1067, "properties"], [1068, "properties"], [1070, "properties"], [1071, "properties"], [1072, "properties"], [1073, "properties"], [1074, "properties"], [1075, "properties"], [1076, "properties"], [1077, "properties"], [1078, "properties"], [1079, "properties"], [1080, "properties"], [1081, "properties"], [1082, "properties"], [1083, "properties"], [1084, "properties"], [1085, "properties"], [1086, "properties"], [1087, "properties"], [1088, "properties"], [1089, "properties"], [1090, "properties"], [1091, "properties"], [1092, "properties"], [1093, "properties"], [1094, "properties"], [1095, "properties"], [1096, "properties"], [1098, "properties"], [1099, "properties"]], "association": [[31, "association"]], "Slot: associations": [[32, "slot-associations"]], "Slot: associations_for_subjects_in_common": [[33, "slot-associations-for-subjects-in-common"]], "Slot: closure_delta": [[34, "slot-closure-delta"]], "Slot: closure_information_content_delta": [[35, "slot-closure-information-content-delta"]], "Slot: closure_predicates": [[36, "slot-closure-predicates"]], "Slot: comments": [[37, "slot-comments"], [426, "slot-comments"], [950, "slot-comments"]], "Slot: core_triple": [[38, "slot-core-triple"]], "Slot: creation_date": [[39, "slot-creation-date"], [570, "slot-creation-date"]], "Slot: date": [[40, "slot-date"], [574, "slot-date"]], "Slot: denormalized_slot": [[41, "slot-denormalized-slot"]], "Mixin Usage": [[41, "mixin-usage"], [42, "mixin-usage"], [166, "mixin-usage"], [167, "mixin-usage"], [175, "mixin-usage"], [181, "mixin-usage"], [184, "mixin-usage"], [193, "mixin-usage"], [198, "mixin-usage"], [199, "mixin-usage"], [483, "mixin-usage"], [491, "mixin-usage"], [499, "mixin-usage"], [504, "mixin-usage"], [505, "mixin-usage"], [506, "mixin-usage"], [507, "mixin-usage"], [508, "mixin-usage"], [509, "mixin-usage"], [510, "mixin-usage"], [528, "mixin-usage"], [534, "mixin-usage"], [538, "mixin-usage"], [539, "mixin-usage"], [632, "mixin-usage"], [980, "mixin-usage"]], "Slot: diff_slot": [[42, "slot-diff-slot"]], "Slot: evidence_type": [[43, "slot-evidence-type"]], "Slot: group_object": [[44, "slot-group-object"]], "Slot: include_association_attributes": [[45, "slot-include-association-attributes"]], "OAK Association Data Model": [[46, "oak-association-data-model"]], "Classes": [[46, "classes"], [127, "classes"], [165, "classes"], [236, "classes"], [281, "classes"], [333, "classes"], [439, "classes"], [615, "classes"], [719, "classes"], [782, "classes"], [884, "classes"], [955, "classes"], [1003, "classes"], [1069, "classes"]], "Enumerations": [[46, "enumerations"], [127, "enumerations"], [165, "enumerations"], [236, "enumerations"], [281, "enumerations"], [333, "enumerations"], [439, "enumerations"], [615, "enumerations"], [719, "enumerations"], [782, "enumerations"], [884, "enumerations"], [955, "enumerations"], [1003, "enumerations"], [1069, "enumerations"]], "Types": [[46, "types"], [127, "types"], [165, "types"], [236, "types"], [281, "types"], [333, "types"], [439, "types"], [615, "types"], [719, "types"], [782, "types"], [884, "types"], [955, "types"], [1003, "types"], [1069, "types"]], "Slot: is_creation": [[47, "slot-is-creation"]], "Slot: is_deletion": [[48, "slot-is-deletion"]], "Slot: is_generalization": [[49, "slot-is-generalization"]], "Slot: is_migration": [[50, "slot-is-migration"]], "Slot: is_specialization": [[51, "slot-is-specialization"]], "Slot: modification_date": [[52, "slot-modification-date"]], "Slot: negated": [[53, "slot-negated"]], "Slot: new_date": [[54, "slot-new-date"]], "Slot: new_object": [[55, "slot-new-object"]], "Slot: new_predicate": [[56, "slot-new-predicate"]], "Slot: number_subject_unique_to_entity1": [[57, "slot-number-subject-unique-to-entity1"]], "Slot: number_subject_unique_to_entity2": [[58, "slot-number-subject-unique-to-entity2"]], "Slot: number_subjects_in_common": [[59, "slot-number-subjects-in-common"]], "Slot: number_subjects_in_union": [[60, "slot-number-subjects-in-union"]], "Slot: object": [[61, "slot-object"], [181, "slot-object"], [640, "slot-object"], [1075, "slot-object"]], "Slot: object1": [[62, "slot-object1"]], "Slot: object1_label": [[63, "slot-object1-label"]], "Slot: object2": [[64, "slot-object2"]], "Slot: object2_label": [[65, "slot-object2-label"]], "Slot: object_closure": [[66, "slot-object-closure"]], "Slot: object_closure_label": [[67, "slot-object-closure-label"]], "Slot: object_label": [[68, "slot-object-label"], [728, "slot-object-label"], [797, "slot-object-label"], [1014, "slot-object-label"]], "Slot: old_date": [[69, "slot-old-date"]], "Slot: old_object": [[70, "slot-old-object"]], "Slot: old_object_obsolete": [[71, "slot-old-object-obsolete"]], "Slot: old_predicate": [[72, "slot-old-predicate"]], "Slot: original_object": [[73, "slot-original-object"]], "Slot: original_predicate": [[74, "slot-original-predicate"]], "Slot: original_subject": [[75, "slot-original-subject"]], "Slot: predicate": [[76, "slot-predicate"], [184, "slot-predicate"], [288, "slot-predicate"], [353, "slot-predicate"], [650, "slot-predicate"], [959, "slot-predicate"], [1079, "slot-predicate"]], "Slot: predicate_label": [[77, "slot-predicate-label"]], "Slot: preserve_negated_associations": [[78, "slot-preserve-negated-associations"]], "Slot: primary_knowledge_source": [[79, "slot-primary-knowledge-source"]], "Slot: property_values": [[80, "slot-property-values"]], "Slot: proportion_subjects_in_common": [[81, "slot-proportion-subjects-in-common"]], "Slot: publication_is_added": [[82, "slot-publication-is-added"]], "Slot: publication_is_deleted": [[83, "slot-publication-is-deleted"]], "Slot: publications": [[84, "slot-publications"]], "Slot: sub_groups": [[85, "slot-sub-groups"]], "Slot: subject": [[86, "slot-subject"], [199, "slot-subject"], [967, "slot-subject"], [1088, "slot-subject"]], "Slot: subject_closure": [[87, "slot-subject-closure"]], "Slot: subject_closure_label": [[88, "slot-subject-closure-label"]], "Slot: subject_label": [[89, "slot-subject-label"], [807, "slot-subject-label"], [1021, "slot-subject-label"]], "Slot: subjects_in_common": [[90, "slot-subjects-in-common"]], "Slot: summary_group": [[91, "slot-summary-group"]], "Slot: supporting_objects": [[92, "slot-supporting-objects"]], "Class: ClassEnrichmentConfiguration": [[94, "class-classenrichmentconfiguration"]], "Class: ClassEnrichmentResult": [[95, "class-classenrichmentresult"]], "Class: ClassEnrichmentResultSet": [[96, "class-classenrichmentresultset"]], "Type: Position": [[110, "type-position"], [987, "type-position"]], "Enum: SortFieldEnum": [[111, "enum-sortfieldenum"]], "Permissible Values": [[111, "permissible-values"], [142, "permissible-values"], [150, "permissible-values"], [216, "permissible-values"], [275, "permissible-values"], [326, "permissible-values"], [399, "permissible-values"], [403, "permissible-values"], [406, "permissible-values"], [408, "permissible-values"], [409, "permissible-values"], [497, "permissible-values"], [678, "permissible-values"], [687, "permissible-values"], [696, "permissible-values"], [700, "permissible-values"], [924, "permissible-values"], [995, "permissible-values"], [1053, "permissible-values"], [1063, "permissible-values"]], "Slot: ancestor_of_more_informative_result": [[117, "slot-ancestor-of-more-informative-result"]], "Slot: background_count": [[118, "slot-background-count"]], "Slot: background_total": [[119, "slot-background-total"]], "class-enrichment": [[120, "class-enrichment"]], "Slot: class_id": [[121, "slot-class-id"]], "Slot: class_label": [[122, "slot-class-label"]], "Slot: descendant_of_more_informative_result": [[123, "slot-descendant-of-more-informative-result"]], "Slot: direction": [[124, "slot-direction"]], "Slot: false_discovery_rate": [[125, "slot-false-discovery-rate"]], "Slot: fold_enrichment": [[126, "slot-fold-enrichment"]], "Class Enrichment Datamodel": [[127, "class-enrichment-datamodel"]], "Slot: p_value": [[128, "slot-p-value"]], "Slot: p_value_adjusted": [[129, "slot-p-value-adjusted"]], "Slot: p_value_cutoff": [[130, "slot-p-value-cutoff"]], "Slot: probability": [[131, "slot-probability"]], "Slot: rank": [[132, "slot-rank"], [734, "slot-rank"]], "Slot: results": [[133, "slot-results"], [185, "slot-results"], [736, "slot-results"], [1084, "slot-results"]], "Slot: sample_count": [[134, "slot-sample-count"]], "Slot: sample_total": [[135, "slot-sample-total"]], "Enum: DiffCategory": [[142, "enum-diffcategory"]], "Type: EntityReference": [[144, "type-entityreference"]], "Type: Label": [[149, "type-label"]], "Enum: MappingCardinalityEnum": [[150, "enum-mappingcardinalityenum"]], "Position": [[154, "position"]], "Class: RelationalDiff": [[155, "class-relationaldiff"]], "Type: Source": [[156, "type-source"]], "Class: StructureDiffResultSet": [[159, "class-structurediffresultset"]], "Slot: category": [[163, "slot-category"], [559, "slot-category"], [1064, "slot-category"]], "cross-ontology-diff": [[164, "cross-ontology-diff"]], "Cross-Ontology Diff": [[165, "cross-ontology-diff"]], "Slot: is_functional": [[166, "slot-is-functional"]], "Slot: label": [[167, "slot-label"], [441, "slot-label"], [627, "slot-label"], [786, "slot-label"], [887, "slot-label"], [956, "slot-label"]], "Slot: left_object_id": [[168, "slot-left-object-id"]], "Slot: left_object_is_functional": [[169, "slot-left-object-is-functional"]], "Slot: left_object_label": [[170, "slot-left-object-label"]], "Slot: left_object_name": [[171, "slot-left-object-name"]], "Slot: left_predicate_id": [[172, "slot-left-predicate-id"]], "Slot: left_predicate_label": [[173, "slot-left-predicate-label"]], "Slot: left_predicate_name": [[174, "slot-left-predicate-name"]], "Slot: left_side": [[175, "slot-left-side"]], "Slot: left_source": [[176, "slot-left-source"]], "Slot: left_subject_id": [[177, "slot-left-subject-id"]], "Slot: left_subject_is_functional": [[178, "slot-left-subject-is-functional"]], "Slot: left_subject_label": [[179, "slot-left-subject-label"]], "Slot: left_subject_name": [[180, "slot-left-subject-name"]], "Slot: object_mapping_cardinality": [[182, "slot-object-mapping-cardinality"]], "Slot: object_mapping_predicate": [[183, "slot-object-mapping-predicate"]], "Slot: right_intermediate_ids": [[186, "slot-right-intermediate-ids"]], "Slot: right_object_id": [[187, "slot-right-object-id"]], "Slot: right_object_label": [[188, "slot-right-object-label"]], "Slot: right_object_name": [[189, "slot-right-object-name"]], "Slot: right_predicate_ids": [[190, "slot-right-predicate-ids"]], "Slot: right_predicate_labels": [[191, "slot-right-predicate-labels"]], "Slot: right_predicate_names": [[192, "slot-right-predicate-names"]], "Slot: right_side": [[193, "slot-right-side"]], "Slot: right_source": [[194, "slot-right-source"]], "Slot: right_subject_id": [[195, "slot-right-subject-id"]], "Slot: right_subject_label": [[196, "slot-right-subject-label"]], "Slot: right_subject_name": [[197, "slot-right-subject-name"]], "Slot: side": [[198, "slot-side"]], "Slot: subject_mapping_cardinality": [[200, "slot-subject-mapping-cardinality"]], "Slot: subject_mapping_predicate": [[201, "slot-subject-mapping-predicate"]], "types": [[202, "types"], [295, "types"], [372, "types"], [471, "types"], [671, "types"], [743, "types"], [812, "types"], [916, "types"], [1028, "types"], [1097, "types"]], "FunOwl": [[203, "funowl"]], "Datamodels": [[204, "datamodels"], [1179, "datamodels"]], "Contents:": [[204, null], [1105, null], [1113, null], [1122, null], [1129, null], [1130, null], [1145, null], [1154, null], [1167, null], [1173, null]], "Class: ItemList": [[214, "class-itemlist"]], "Aliases": [[214, "aliases"], [215, "aliases"], [383, "aliases"], [388, "aliases"], [395, "aliases"], [396, "aliases"], [407, "aliases"], [435, "aliases"], [443, "aliases"], [445, "aliases"], [449, "aliases"], [462, "aliases"], [464, "aliases"], [474, "aliases"], [475, "aliases"], [490, "aliases"], [524, "aliases"], [543, "aliases"], [580, "aliases"], [783, "aliases"]], "Class: ItemListCollection": [[215, "class-itemlistcollection"]], "Enum: ItemListOrderType": [[216, "enum-itemlistordertype"]], "Class: ListItem": [[219, "class-listitem"]], "Class: Thing": [[225, "class-thing"], [544, "class-thing"]], "Slot: additionalType": [[229, "slot-additionaltype"]], "Slot: categories": [[230, "slot-categories"], [709, "slot-categories"], [999, "slot-categories"]], "Slot: description": [[231, "slot-description"], [329, "slot-description"], [873, "slot-description"], [952, "slot-description"]], "Slot: elementId": [[232, "slot-elementid"]], "Slot: id": [[233, "slot-id"], [438, "slot-id"], [610, "slot-id"], [781, "slot-id"], [883, "slot-id"], [954, "slot-id"], [1001, "slot-id"], [1068, "slot-id"]], "Slot: idType": [[234, "slot-idtype"]], "Slot: identifiers": [[235, "slot-identifiers"]], "Item List Data Model": [[236, "item-list-data-model"]], "Slot: item": [[237, "slot-item"]], "itemList": [[238, "itemlist"]], "Slot: itemListElements": [[239, "slot-itemlistelements"]], "Slot: itemLists": [[240, "slot-itemlists"]], "Slot: itemMetadataMap": [[241, "slot-itemmetadatamap"]], "Slot: keywords": [[242, "slot-keywords"]], "Slot: name": [[243, "slot-name"], [284, "slot-name"], [343, "slot-name"]], "Slot: numberOfItems": [[244, "slot-numberofitems"]], "Slot: position": [[245, "slot-position"]], "Slot: previousItem": [[246, "slot-previousitem"]], "Slot: type": [[247, "slot-type"], [294, "slot-type"], [371, "slot-type"], [470, "slot-type"], [670, "slot-type"], [1095, "slot-type"]], "Slot: url": [[248, "slot-url"], [673, "slot-url"], [1098, "slot-url"]], "Slot: wasGeneratedBy": [[249, "slot-wasgeneratedby"]], "KGCL": [[250, "kgcl"]], "Class: Activity": [[251, "class-activity"], [296, "class-activity"]], "Class: Any": [[252, "class-any"], [297, "class-any"], [486, "class-any"]], "Class: LexicalGrouping": [[264, "class-lexicalgrouping"], [309, "class-lexicalgrouping"]], "Class: LexicalIndex": [[265, "class-lexicalindex"], [310, "class-lexicalindex"]], "Class: LexicalTransformation": [[266, "class-lexicaltransformation"], [311, "class-lexicaltransformation"]], "Class: LexicalTransformationPipeline": [[267, "class-lexicaltransformationpipeline"], [312, "class-lexicaltransformationpipeline"]], "Class: RelationshipToTerm": [[271, "class-relationshiptoterm"], [320, "class-relationshiptoterm"]], "Enum: TransformationType": [[275, "enum-transformationtype"], [326, "enum-transformationtype"], [995, "enum-transformationtype"]], "Slot: element": [[278, "slot-element"], [330, "slot-element"]], "Slot: element_term": [[279, "slot-element-term"], [331, "slot-element-term"]], "Slot: groupings": [[280, "slot-groupings"], [332, "slot-groupings"]], "Lexical Index": [[281, "lexical-index"]], "lexical-index": [[282, "lexical-index"], [335, "lexical-index"]], "lexican-index": [[283, "lexican-index"], [336, "lexican-index"]], "Slot: params": [[285, "slot-params"], [348, "slot-params"]], "Slot: pipeline": [[286, "slot-pipeline"], [349, "slot-pipeline"]], "Slot: pipelines": [[287, "slot-pipelines"], [350, "slot-pipelines"]], "Slot: relationships": [[289, "slot-relationships"], [358, "slot-relationships"]], "Slot: source": [[290, "slot-source"], [361, "slot-source"], [662, "slot-source"], [1087, "slot-source"]], "Slot: synonymized": [[291, "slot-synonymized"], [364, "slot-synonymized"]], "Slot: term": [[292, "slot-term"], [366, "slot-term"]], "Slot: transformations": [[293, "slot-transformations"], [369, "slot-transformations"]], "Class: MappingRule": [[313, "class-mappingrule"]], "Class: MappingRuleCollection": [[314, "class-mappingrulecollection"]], "Class: Postcondition": [[318, "class-postcondition"]], "Class: Precondition": [[319, "class-precondition"]], "Class: Synonymizer": [[323, "class-synonymizer"]], "Class: Test": [[324, "class-test"]], "Mapping Rules Datamodel": [[333, "mapping-rules-datamodel"]], "Slot: input": [[334, "slot-input"]], "mapping-rules": [[337, "mapping-rules"]], "mapping-rules-datamodel": [[338, "mapping-rules-datamodel"]], "Slot: mapping_source_one_of": [[339, "slot-mapping-source-one-of"]], "Slot: match": [[340, "slot-match"], [631, "slot-match"]], "Slot: match_scope": [[341, "slot-match-scope"]], "Slot: minimum_confidence": [[342, "slot-minimum-confidence"]], "Slot: object_match_field_one_of": [[344, "slot-object-match-field-one-of"]], "Slot: object_source_one_of": [[345, "slot-object-source-one-of"]], "Slot: oneway": [[346, "slot-oneway"]], "Slot: output": [[347, "slot-output"]], "Slot: postconditions": [[351, "slot-postconditions"]], "Slot: preconditions": [[352, "slot-preconditions"]], "Slot: predicate_id": [[354, "slot-predicate-id"], [1017, "slot-predicate-id"], [1080, "slot-predicate-id"]], "Slot: predicate_id_one_of": [[355, "slot-predicate-id-one-of"]], "Slot: prefix": [[356, "slot-prefix"], [454, "slot-prefix"], [904, "slot-prefix"]], "Slot: qualifier": [[357, "slot-qualifier"]], "Slot: replacement": [[359, "slot-replacement"]], "Slot: rules": [[360, "slot-rules"]], "Slot: subject_match_field_one_of": [[362, "slot-subject-match-field-one-of"]], "Slot: subject_source_one_of": [[363, "slot-subject-source-one-of"]], "Slot: synonymizer": [[365, "slot-synonymizer"]], "Slot: tests": [[367, "slot-tests"]], "Slot: the_rule": [[368, "slot-the-rule"]], "Slot: transformations_included_in": [[370, "slot-transformations-included-in"]], "Slot: weight": [[373, "slot-weight"]], "See Also": [[373, "see-also"], [402, "see-also"], [415, "see-also"], [420, "see-also"], [436, "see-also"], [438, "see-also"], [462, "see-also"], [479, "see-also"], [480, "see-also"], [497, "see-also"], [598, "see-also"], [1165, "see-also"]], "Class: Axiom": [[374, "class-axiom"], [487, "class-axiom"]], "Class: BasicPropertyValue": [[375, "class-basicpropertyvalue"]], "Class: DefinitionPropertyValue": [[382, "class-definitionpropertyvalue"]], "Class: DisjointClassExpressionsAxiom": [[383, "class-disjointclassexpressionsaxiom"]], "Class: DomainRangeAxiom": [[384, "class-domainrangeaxiom"]], "Class: Edge": [[386, "class-edge"]], "Class: EquivalentNodesSet": [[387, "class-equivalentnodesset"]], "Class: ExistentialRestrictionExpression": [[388, "class-existentialrestrictionexpression"]], "Annotations": [[388, "annotations"], [395, "annotations"], [849, "annotations"], [851, "annotations"], [857, "annotations"], [858, "annotations"], [859, "annotations"], [862, "annotations"], [863, "annotations"], [864, "annotations"], [870, "annotations"], [871, "annotations"], [872, "annotations"], [875, "annotations"], [876, "annotations"], [878, "annotations"], [885, "annotations"], [888, "annotations"], [889, "annotations"], [890, "annotations"], [891, "annotations"], [892, "annotations"], [894, "annotations"], [895, "annotations"], [896, "annotations"], [898, "annotations"], [900, "annotations"], [901, "annotations"], [906, "annotations"], [913, "annotations"], [914, "annotations"], [917, "annotations"]], "Class: Graph": [[390, "class-graph"]], "Class: GraphDocument": [[391, "class-graphdocument"]], "Class: LogicalDefinitionAxiom": [[395, "class-logicaldefinitionaxiom"]], "Class: Meta": [[396, "class-meta"]], "Class: Node": [[398, "class-node"], [1045, "class-node"]], "Enum: NodeTypeEnum": [[399, "enum-nodetypeenum"]], "Type: OboIdentifierString": [[402, "type-oboidentifierstring"]], "PredsEnum": [[403, "predsenum"]], "Class: PrefixDeclaration": [[404, "class-prefixdeclaration"]], "Class: PropertyChainAxiom": [[405, "class-propertychainaxiom"]], "Enum: PropertyTypeEnum": [[406, "enum-propertytypeenum"]], "Enum: ScopeEnum": [[408, "enum-scopeenum"]], "ScopesEnum": [[409, "scopesenum"]], "Class: SubsetDefinition": [[412, "class-subsetdefinition"]], "Class: SynonymPropertyValue": [[413, "class-synonympropertyvalue"]], "Class: SynonymTypeDefinition": [[414, "class-synonymtypedefinition"]], "Type: SynonymTypeIdentifierString": [[415, "type-synonymtypeidentifierstring"]], "Class: XrefPropertyValue": [[419, "class-xrefpropertyvalue"]], "Type: XrefString": [[420, "type-xrefstring"]], "Slot: allValuesFromEdges": [[421, "slot-allvaluesfromedges"]], "Slot: basicPropertyValues": [[422, "slot-basicpropertyvalues"]], "Slot: chainPredicateIds": [[423, "slot-chainpredicateids"]], "Slot: classExpressions": [[424, "slot-classexpressions"]], "Slot: classIds": [[425, "slot-classids"]], "Slot: definedClassId": [[427, "slot-definedclassid"]], "Slot: definition": [[428, "slot-definition"], [577, "slot-definition"]], "Slot: deprecated": [[429, "slot-deprecated"], [580, "slot-deprecated"]], "Slot: disjointClassExpressionsAxioms": [[430, "slot-disjointclassexpressionsaxioms"]], "Slot: domainClassIds": [[431, "slot-domainclassids"]], "Slot: domainRangeAxioms": [[432, "slot-domainrangeaxioms"]], "Slot: edges": [[433, "slot-edges"]], "Slot: equivalentNodesSets": [[434, "slot-equivalentnodessets"]], "Slot: fillerId": [[435, "slot-fillerid"]], "Slot: genusIds": [[436, "slot-genusids"]], "Slot: graphs": [[437, "slot-graphs"]], "Obographs Datamodel": [[439, "obographs-datamodel"]], "Slot: isExact": [[440, "slot-isexact"]], "Slot: lang": [[442, "slot-lang"]], "Slot: lbl": [[443, "slot-lbl"]], "Slot: logicalDefinitionAxioms": [[444, "slot-logicaldefinitionaxioms"]], "Slot: meta": [[445, "slot-meta"]], "Slot: namespace": [[446, "slot-namespace"]], "Slot: nodeIds": [[447, "slot-nodeids"]], "Slot: nodes": [[448, "slot-nodes"]], "Slot: obj": [[449, "slot-obj"]], "obographs_datamodel": [[450, "obographs-datamodel"]], "obographs_linkml_model": [[451, "obographs-linkml-model"]], "Slot: pred": [[452, "slot-pred"]], "Slot: predicateId": [[453, "slot-predicateid"]], "Slot: prefixes": [[455, "slot-prefixes"]], "Slot: propertyChainAxioms": [[456, "slot-propertychainaxioms"]], "Slot: propertyId": [[457, "slot-propertyid"]], "Slot: propertyType": [[458, "slot-propertytype"]], "Slot: rangeClassIds": [[459, "slot-rangeclassids"]], "Slot: representativeNodeId": [[460, "slot-representativenodeid"]], "Slot: representitiveNodeId": [[461, "slot-representitivenodeid"]], "Slot: restrictions": [[462, "slot-restrictions"]], "Slot: scope": [[463, "slot-scope"]], "Slot: sub": [[464, "slot-sub"]], "Slot: subsetDefinitions": [[465, "slot-subsetdefinitions"]], "Slot: subsets": [[466, "slot-subsets"]], "Slot: synonymType": [[467, "slot-synonymtype"]], "Slot: synonymTypeDefinitions": [[468, "slot-synonymtypedefinitions"]], "Slot: synonyms": [[469, "slot-synonyms"]], "Slot: unionEquivalentTo": [[472, "slot-unionequivalentto"]], "Slot: unionEquivalentToExpression": [[473, "slot-unionequivalenttoexpression"]], "Slot: val": [[474, "slot-val"]], "Slot: valType": [[475, "slot-valtype"]], "Slot: version": [[476, "slot-version"], [919, "slot-version"]], "Slot: xrefs": [[477, "slot-xrefs"]], "Class: Agent": [[478, "class-agent"], [815, "class-agent"]], "Valid ID Prefixes": [[478, "valid-id-prefixes"], [511, "valid-id-prefixes"], [938, "valid-id-prefixes"], [942, "valid-id-prefixes"]], "Subset: AllotropePermittedProfile": [[479, "subset-allotropepermittedprofile"]], "Slots in subset": [[479, "slots-in-subset"], [480, "slots-in-subset"], [501, "slots-in-subset"], [503, "slots-in-subset"], [530, "slots-in-subset"], [531, "slots-in-subset"]], "Subset: AllotropeRequiredProfile": [[480, "subset-allotroperequiredprofile"]], "Class: Annotation": [[481, "class-annotation"]], "Class: AnnotationProperty": [[482, "class-annotationproperty"]], "Class: AnnotationPropertyMixin": [[483, "class-annotationpropertymixin"]], "Class: Anonymous": [[484, "class-anonymous"]], "Class: AnonymousClassExpression": [[485, "class-anonymousclassexpression"]], "Type: CURIELiteral": [[489, "type-curieliteral"]], "Class: Class": [[490, "class-class"]], "Class: ClassExpression": [[491, "class-classexpression"]], "Enum: DefinitionConstraintComponent": [[497, "enum-definitionconstraintcomponent"]], "Class: Expression": [[499, "class-expression"]], "Subset: GoPermittedProfile": [[501, "subset-gopermittedprofile"]], "Subset: GoRecommendedProfile": [[502, "subset-gorecommendedprofile"]], "Subset: GoRequiredProfile": [[503, "subset-gorequiredprofile"]], "Class: HasCategory": [[504, "class-hascategory"]], "Class: HasLifeCycle": [[505, "class-haslifecycle"]], "Class: HasMappings": [[506, "class-hasmappings"]], "Class: HasMinimalMetadata": [[507, "class-hasminimalmetadata"]], "Class: HasProvenance": [[508, "class-hasprovenance"]], "Class: HasSynonyms": [[509, "class-hassynonyms"]], "Class: HasUserInformation": [[510, "class-hasuserinformation"]], "Class: HomoSapiens": [[511, "class-homosapiens"]], "Slot: IEDB_alternative_term": [[512, "slot-iedb-alternative-term"]], "Slot: ISA_alternative_term": [[513, "slot-isa-alternative-term"]], "Class: Image": [[514, "class-image"]], "Type: IriType": [[516, "type-iritype"]], "Type: LabelType": [[519, "type-labeltype"]], "Slot: NCIT_definition_source": [[520, "slot-ncit-definition-source"]], "Slot: NCIT_term_source": [[521, "slot-ncit-term-source"]], "Slot: NCIT_term_type": [[522, "slot-ncit-term-type"]], "Class: NamedIndividual": [[523, "class-namedindividual"]], "Class: NamedObject": [[524, "class-namedobject"]], "Type: NarrativeText": [[525, "type-narrativetext"]], "Class: NotObsoleteAspect": [[528, "class-notobsoleteaspect"]], "Slot: OBO_foundry_unique_label": [[529, "slot-obo-foundry-unique-label"]], "TODOs": [[529, "todos"], [551, "todos"], [554, "todos"], [555, "todos"], [563, "todos"], [570, "todos"], [578, "todos"], [582, "todos"], [584, "todos"], [587, "todos"], [597, "todos"], [605, "todos"], [617, "todos"], [618, "todos"], [651, "todos"], [654, "todos"], [656, "todos"], [657, "todos"], [661, "todos"], [668, "todos"], [695, "todos"], [773, "todos"], [959, "todos"], [1049, "todos"], [1061, "todos"]], "Subset: ObiPermittedProfile": [[530, "subset-obipermittedprofile"]], "Subset: ObiRequiredProfile": [[531, "subset-obirequiredprofile"]], "Class: ObjectProperty": [[532, "class-objectproperty"]], "Class: ObsoleteAspect": [[534, "class-obsoleteaspect"]], "Class: Ontology": [[535, "class-ontology"], [837, "class-ontology"]], "Ontology-Metadata": [[536, "ontology-metadata"]], "Class: Property": [[537, "class-property"]], "Class: PropertyExpression": [[538, "class-propertyexpression"]], "Class: Restriction": [[539, "class-restriction"]], "Class: Subset": [[542, "class-subset"]], "Class: Term": [[543, "class-term"], [944, "class-term"]], "Type: TidyString": [[545, "type-tidystring"]], "Class: TransitiveProperty": [[547, "class-transitiveproperty"]], "Type: URLLiteral": [[548, "type-urlliteral"]], "Slot: allValuesFrom": [[551, "slot-allvaluesfrom"]], "Slot: alternative_term": [[552, "slot-alternative-term"]], "Slot: annotatedProperty": [[553, "slot-annotatedproperty"]], "Slot: annotatedSource": [[554, "slot-annotatedsource"]], "Slot: annotatedTarget": [[555, "slot-annotatedtarget"]], "Slot: annotations": [[556, "slot-annotations"], [998, "slot-annotations"]], "Slot: broadMatch": [[557, "slot-broadmatch"]], "Slot: cardinality": [[558, "slot-cardinality"]], "Slot: changeNote": [[560, "slot-changenote"]], "Slot: closeMatch": [[561, "slot-closematch"]], "Slot: comment": [[562, "slot-comment"]], "Slot: complementOf": [[563, "slot-complementof"]], "Slot: conformsTo": [[564, "slot-conformsto"]], "Slot: consider": [[565, "slot-consider"]], "Slot: contributor": [[566, "slot-contributor"]], "Slot: core_property": [[567, "slot-core-property"]], "Slot: created": [[568, "slot-created"]], "Slot: created_by": [[569, "slot-created-by"]], "Slot: creator": [[571, "slot-creator"]], "Slot: curator_note": [[572, "slot-curator-note"]], "Slot: database_cross_reference": [[573, "slot-database-cross-reference"]], "Slot: date_retrieved": [[575, "slot-date-retrieved"]], "Slot: defaultLanguage": [[576, "slot-defaultlanguage"]], "Slot: definition_source": [[578, "slot-definition-source"]], "Slot: depicted_by": [[579, "slot-depicted-by"]], "Slot: disconnected_from": [[581, "slot-disconnected-from"]], "Slot: disjointWith": [[582, "slot-disjointwith"]], "Slot: distinctMembers": [[583, "slot-distinctmembers"]], "Slot: domain": [[584, "slot-domain"]], "Slot: editor_note": [[585, "slot-editor-note"]], "Slot: editor_preferred_term": [[586, "slot-editor-preferred-term"]], "Slot: equivalentClass": [[587, "slot-equivalentclass"]], "Slot: equivalentProperty": [[588, "slot-equivalentproperty"]], "Slot: evidence": [[589, "slot-evidence"]], "Slot: exactMatch": [[590, "slot-exactmatch"]], "Slot: example_of_usage": [[591, "slot-example-of-usage"]], "Slot: excluded_axiom": [[592, "slot-excluded-axiom"]], "Slot: excluded_from_QC_check": [[593, "slot-excluded-from-qc-check"]], "Slot: excluded_subClassOf": [[594, "slot-excluded-subclassof"]], "Slot: excluded_synonym": [[595, "slot-excluded-synonym"]], "Slot: external_ontology": [[596, "slot-external-ontology"]], "Slot: hasValue": [[597, "slot-hasvalue"]], "Slot: has_alternative_id": [[598, "slot-has-alternative-id"]], "Slot: has_axiom_label": [[599, "slot-has-axiom-label"]], "Slot: has_broad_synonym": [[600, "slot-has-broad-synonym"]], "Slot: has_curation_status": [[601, "slot-has-curation-status"]], "Slot: has_exact_synonym": [[602, "slot-has-exact-synonym"]], "Slot: has_narrow_synonym": [[603, "slot-has-narrow-synonym"]], "Slot: has_obo_namespace": [[604, "slot-has-obo-namespace"]], "Slot: has_obsolescence_reason": [[605, "slot-has-obsolescence-reason"]], "Slot: has_ontology_root_term": [[606, "slot-has-ontology-root-term"]], "Slot: has_rank": [[607, "slot-has-rank"]], "Slot: has_related_synonym": [[608, "slot-has-related-synonym"]], "Slot: has_synonym_type": [[609, "slot-has-synonym-type"]], "Slot: image": [[611, "slot-image"]], "Slot: imported_from": [[612, "slot-imported-from"]], "Slot: imports": [[613, "slot-imports"]], "Slot: in_subset": [[614, "slot-in-subset"]], "Ontology Metadata Ontology Schema": [[615, "ontology-metadata-ontology-schema"]], "Slot: informative_property": [[616, "slot-informative-property"]], "Slot: intersectionOf": [[617, "slot-intersectionof"]], "Slot: inverseOf": [[618, "slot-inverseof"]], "Slot: isDefinedBy": [[619, "slot-isdefinedby"]], "Slot: is_a_defining_property_chain_axiom": [[620, "slot-is-a-defining-property-chain-axiom"]], "Slot: is_a_defining_property_chain_axiom_where_second_argument_is_reflexive": [[621, "slot-is-a-defining-property-chain-axiom-where-second-argument-is-reflexive"]], "Slot: is_class_level": [[622, "slot-is-class-level"]], "Slot: is_cyclic": [[623, "slot-is-cyclic"]], "Slot: is_inferred": [[624, "slot-is-inferred"]], "Slot: is_metadata_tag": [[625, "slot-is-metadata-tag"]], "Slot: is_transitive": [[626, "slot-is-transitive"]], "Slot: language": [[628, "slot-language"]], "Slot: license": [[629, "slot-license"]], "Slot: logical_predicate": [[630, "slot-logical-predicate"]], "Slot: match_aspect": [[632, "slot-match-aspect"]], "Slot: maxQualifiedCardinality": [[633, "slot-maxqualifiedcardinality"]], "Slot: members": [[634, "slot-members"]], "Slot: minCardinality": [[635, "slot-mincardinality"]], "Slot: minQualifiedCardinality": [[636, "slot-minqualifiedcardinality"]], "Slot: narrowMatch": [[637, "slot-narrowmatch"]], "Slot: never_in_taxon": [[638, "slot-never-in-taxon"]], "Slot: notes": [[639, "slot-notes"]], "Slot: oboInOwl_id": [[641, "slot-oboinowl-id"]], "Slot: oboInOwl_ontology": [[642, "slot-oboinowl-ontology"]], "Slot: obsoletion_related_property": [[643, "slot-obsoletion-related-property"]], "omo-schema": [[644, "omo-schema"]], "Slot: onClass": [[645, "slot-onclass"]], "Slot: onProperty": [[646, "slot-onproperty"]], "Slot: oneOf": [[647, "slot-oneof"]], "Slot: ontology_term_requester": [[648, "slot-ontology-term-requester"]], "Slot: page": [[649, "slot-page"]], "Slot: propertyChainAxiom": [[651, "slot-propertychainaxiom"]], "Slot: provenance_property": [[652, "slot-provenance-property"]], "Slot: qualifiedCardinality": [[653, "slot-qualifiedcardinality"]], "Slot: range": [[654, "slot-range"]], "Slot: reification_predicate": [[655, "slot-reification-predicate"]], "Slot: sameAs": [[656, "slot-sameas"]], "Slot: seeAlso": [[657, "slot-seealso"]], "Slot: shortcut_annotation_property": [[658, "slot-shortcut-annotation-property"]], "Slot: shorthand": [[659, "slot-shorthand"]], "Slot: should_conform_to": [[660, "slot-should-conform-to"]], "Slot: someValuesFrom": [[661, "slot-somevaluesfrom"]], "Slot: subClassOf": [[663, "slot-subclassof"]], "Slot: synonym": [[664, "slot-synonym"]], "Slot: temporal_interpretation": [[665, "slot-temporal-interpretation"]], "Slot: term_editor": [[666, "slot-term-editor"]], "Slot: term_replaced_by": [[667, "slot-term-replaced-by"]], "Slot: term_tracker_item": [[668, "slot-term-tracker-item"]], "Slot: title": [[669, "slot-title"], [915, "slot-title"]], "Slot: unionOf": [[672, "slot-unionof"]], "Slot: versionIRI": [[674, "slot-versioniri"]], "Slot: versionInfo": [[675, "slot-versioninfo"]], "Slot: version_property": [[676, "slot-version-property"]], "Enum: BooleanOperator": [[678, "enum-booleanoperator"]], "Class: ComplexQuery": [[679, "class-complexquery"]], "Enum: GraphFunction": [[687, "enum-graphfunction"]], "Class: PathExpression": [[694, "class-pathexpression"]], "Class: SearchBaseConfiguration": [[695, "class-searchbaseconfiguration"]], "Enum: SearchProperty": [[696, "enum-searchproperty"]], "Class: SearchResult": [[697, "class-searchresult"]], "Class: SearchResultSet": [[698, "class-searchresultset"]], "Type: SearchTerm": [[699, "type-searchterm"]], "Enum: SearchTermSyntax": [[700, "enum-searchtermsyntax"]], "Slot: all_of": [[706, "slot-all-of"]], "Slot: any_of": [[707, "slot-any-of"]], "Slot: atom": [[708, "slot-atom"]], "Slot: configuration": [[710, "slot-configuration"]], "Slot: cursor": [[711, "slot-cursor"]], "Slot: force_case_insensitive": [[712, "slot-force-case-insensitive"]], "Slot: graph_predicates": [[713, "slot-graph-predicates"]], "Slot: include_aliases": [[714, "slot-include-aliases"], [1002, "slot-include-aliases"]], "Slot: include_definition": [[715, "slot-include-definition"]], "Slot: include_id": [[716, "slot-include-id"]], "Slot: include_label": [[717, "slot-include-label"]], "Slot: include_obsoletes_in_results": [[718, "slot-include-obsoletes-in-results"]], "search datamodel": [[719, "search-datamodel"]], "Slot: is_complete": [[720, "slot-is-complete"]], "Slot: is_fuzzy": [[721, "slot-is-fuzzy"]], "Slot: is_partial": [[722, "slot-is-partial"]], "Slot: is_regular_expression": [[723, "slot-is-regular-expression"]], "Slot: limit": [[724, "slot-limit"], [1006, "slot-limit"]], "Slot: matches_full_search_term": [[725, "slot-matches-full-search-term"]], "Slot: none_of": [[726, "slot-none-of"]], "Slot: object_id": [[727, "slot-object-id"], [795, "slot-object-id"], [1013, "slot-object-id"], [1076, "slot-object-id"]], "Slot: object_match_field": [[729, "slot-object-match-field"]], "Slot: object_source": [[730, "slot-object-source"], [798, "slot-object-source"], [1015, "slot-object-source"]], "Slot: object_source_version": [[731, "slot-object-source-version"]], "Slot: path_to": [[732, "slot-path-to"]], "Slot: properties": [[733, "slot-properties"]], "Slot: result_count": [[735, "slot-result-count"]], "search-datamodel": [[737, "search-datamodel"]], "Slot: search_term": [[738, "slot-search-term"]], "Slot: search_terms": [[739, "slot-search-terms"]], "Slot: snippet": [[740, "slot-snippet"]], "Slot: syntax": [[741, "slot-syntax"]], "Slot: traversal": [[742, "slot-traversal"]], "SemSQL": [[744, "semsql"]], "Class: BestMatch": [[745, "class-bestmatch"]], "Type: ItemCount": [[755, "type-itemcount"]], "Type: NegativeLogValue": [[759, "type-negativelogvalue"]], "Type: NonNegativeFloat": [[761, "type-nonnegativefloat"]], "Class: PairwiseSimilarity": [[763, "class-pairwisesimilarity"]], "Class: TermInfo": [[766, "class-terminfo"]], "Class: TermPairwiseSimilarity": [[767, "class-termpairwisesimilarity"]], "Class: TermSetPairwiseSimilarity": [[768, "class-termsetpairwisesimilarity"]], "Type: ZeroToOne": [[772, "type-zerotoone"]], "Slot: ancestor_id": [[773, "slot-ancestor-id"]], "Slot: ancestor_information_content": [[774, "slot-ancestor-information-content"]], "Slot: ancestor_label": [[775, "slot-ancestor-label"]], "Slot: ancestor_source": [[776, "slot-ancestor-source"]], "Slot: average_score": [[777, "slot-average-score"]], "Slot: best_score": [[778, "slot-best-score"]], "Slot: cosine_similarity": [[779, "slot-cosine-similarity"]], "Slot: dice_similarity": [[780, "slot-dice-similarity"]], "Semantic Similarity": [[782, "semantic-similarity"]], "Slot: information_content": [[783, "slot-information-content"]], "Slot: intersection_count": [[784, "slot-intersection-count"]], "Slot: jaccard_similarity": [[785, "slot-jaccard-similarity"]], "Slot: match_source": [[787, "slot-match-source"]], "Slot: match_source_label": [[788, "slot-match-source-label"]], "Slot: match_subsumer": [[789, "slot-match-subsumer"]], "Slot: match_subsumer_label": [[790, "slot-match-subsumer-label"]], "Slot: match_target": [[791, "slot-match-target"]], "Slot: match_target_label": [[792, "slot-match-target-label"]], "Slot: metric": [[793, "slot-metric"]], "Slot: object_best_matches": [[794, "slot-object-best-matches"]], "Slot: object_information_content": [[796, "slot-object-information-content"]], "Slot: object_termset": [[799, "slot-object-termset"]], "Slot: overlap_coefficient": [[800, "slot-overlap-coefficient"]], "Slot: phenodigm_score": [[801, "slot-phenodigm-score"]], "Slot: score": [[802, "slot-score"]], "Slot: similarity": [[803, "slot-similarity"]], "Slot: subject_best_matches": [[804, "slot-subject-best-matches"]], "Slot: subject_id": [[805, "slot-subject-id"], [1089, "slot-subject-id"]], "Slot: subject_information_content": [[806, "slot-subject-information-content"]], "Slot: subject_source": [[808, "slot-subject-source"], [1022, "slot-subject-source"]], "Slot: subject_termset": [[809, "slot-subject-termset"]], "Slot: subsumed_by_score": [[810, "slot-subsumed-by-score"]], "Slot: subsumes_score": [[811, "slot-subsumes-score"]], "Slot: union_count": [[813, "slot-union-count"]], "SSSOM": [[814, "sssom"], [1116, "sssom"]], "Class: ChangeTypeStatistic": [[817, "class-changetypestatistic"]], "Class: ContributorRole": [[818, "class-contributorrole"]], "Class: ContributorStatistics": [[819, "class-contributorstatistics"]], "Class: FacetStatistics": [[826, "class-facetstatistics"]], "LinkML Specification": [[826, "linkml-specification"], [829, "linkml-specification"], [840, "linkml-specification"]], "Class: FacetedCount": [[827, "class-facetedcount"]], "Class: GlobalStatistics": [[829, "class-globalstatistics"]], "Class: GroupedStatistics": [[830, "class-groupedstatistics"]], "Class: SummaryStatisticCollection": [[840, "class-summarystatisticcollection"]], "Class: SummaryStatisticsCalculationActivity": [[841, "class-summarystatisticscalculationactivity"]], "Class: SummaryStatisticsReport": [[842, "class-summarystatisticsreport"]], "Class: UngroupedStatistics": [[844, "class-ungroupedstatistics"]], "Slot: acted_on_behalf_of": [[847, "slot-acted-on-behalf-of"]], "Slot: agents": [[848, "slot-agents"]], "Slot: annotation_property_count": [[849, "slot-annotation-property-count"]], "Slot: anonymous_class_expression_count": [[850, "slot-anonymous-class-expression-count"]], "Slot: anonymous_individual_count": [[851, "slot-anonymous-individual-count"]], "Slot: by_category": [[852, "slot-by-category"]], "Slot: by_ontology": [[853, "slot-by-ontology"]], "Slot: by_subset": [[854, "slot-by-subset"]], "Slot: by_taxon": [[855, "slot-by-taxon"]], "Slot: change_summary": [[856, "slot-change-summary"]], "Slot: class_count": [[857, "slot-class-count"]], "Slot: class_count_by_category": [[858, "slot-class-count-by-category"]], "Slot: class_count_by_subset": [[859, "slot-class-count-by-subset"]], "Slot: class_count_excluding_deprecated": [[860, "slot-class-count-excluding-deprecated"]], "Slot: class_count_with_definitions": [[861, "slot-class-count-with-definitions"]], "Slot: class_count_with_text_definitions": [[862, "slot-class-count-with-text-definitions"]], "Slot: class_count_without_text_definitions": [[863, "slot-class-count-without-text-definitions"]], "Slot: class_statistic_group": [[864, "slot-class-statistic-group"]], "Slot: compared_with": [[865, "slot-compared-with"]], "Slot: contributor_id": [[866, "slot-contributor-id"]], "Slot: contributor_name": [[867, "slot-contributor-name"]], "Slot: contributor_summary": [[868, "slot-contributor-summary"]], "Slot: count_statistic": [[869, "slot-count-statistic"]], "Slot: datatype_property_count": [[870, "slot-datatype-property-count"]], "Slot: deprecated_class_count": [[871, "slot-deprecated-class-count"]], "Slot: deprecated_object_property_count": [[872, "slot-deprecated-object-property-count"]], "Slot: description_logic_profile": [[874, "slot-description-logic-profile"]], "Slot: distinct_synonym_count": [[875, "slot-distinct-synonym-count"]], "Slot: edge_count_by_predicate": [[876, "slot-edge-count-by-predicate"]], "Slot: ended_at_time": [[877, "slot-ended-at-time"]], "Slot: entailed_edge_count_by_predicate": [[878, "slot-entailed-edge-count-by-predicate"]], "Slot: equivalent_classes_axiom_count": [[879, "slot-equivalent-classes-axiom-count"]], "Slot: equivalentclasses_axiom_count": [[880, "slot-equivalentclasses-axiom-count"]], "Slot: facet": [[881, "slot-facet"]], "Slot: filtered_count": [[882, "slot-filtered-count"]], "Summary Statistics Datamodel": [[884, "summary-statistics-datamodel"]], "Slot: individual_count": [[885, "slot-individual-count"]], "Slot: individual_statistic_group": [[886, "slot-individual-statistic-group"]], "Slot: mapping_count": [[888, "slot-mapping-count"]], "Slot: mapping_statement_count_by_object_source": [[889, "slot-mapping-statement-count-by-object-source"]], "Slot: mapping_statement_count_by_predicate": [[890, "slot-mapping-statement-count-by-predicate"]], "Slot: mapping_statement_count_subject_by_object_source": [[891, "slot-mapping-statement-count-subject-by-object-source"]], "Slot: merged_class_count": [[892, "slot-merged-class-count"]], "Slot: metadata_statistic_group": [[893, "slot-metadata-statistic-group"]], "Slot: named_individual_count": [[894, "slot-named-individual-count"]], "Slot: non_deprecated_class_count": [[895, "slot-non-deprecated-class-count"]], "Slot: non_deprecated_object_property_count": [[896, "slot-non-deprecated-object-property-count"]], "Slot: normalization_comments": [[897, "slot-normalization-comments"]], "Slot: object_property_count": [[898, "slot-object-property-count"]], "Slot: ontologies": [[899, "slot-ontologies"]], "Slot: ontology_count": [[900, "slot-ontology-count"]], "Slot: owl_axiom_count": [[901, "slot-owl-axiom-count"]], "Slot: owl_statistic_group": [[902, "slot-owl-statistic-group"]], "Slot: partitions": [[903, "slot-partitions"]], "Slot: property_count": [[905, "slot-property-count"]], "Slot: property_statistic_group": [[906, "slot-property-statistic-group"]], "Slot: rdf_triple_count": [[907, "slot-rdf-triple-count"]], "Slot: role_counts": [[908, "slot-role-counts"]], "Slot: started_at_time": [[909, "slot-started-at-time"]], "Slot: subclass_of_axiom_count": [[910, "slot-subclass-of-axiom-count"]], "Slot: subset_count": [[911, "slot-subset-count"]], "summary-statistics": [[912, "summary-statistics"]], "Slot: synonym_statement_count": [[913, "slot-synonym-statement-count"]], "Slot: synonym_statement_count_by_predicate": [[914, "slot-synonym-statement-count-by-predicate"]], "Slot: unsatisfiable_class_count": [[917, "slot-unsatisfiable-class-count"]], "Slot: untyped_entity_count": [[918, "slot-untyped-entity-count"]], "Slot: version_info": [[920, "slot-version-info"]], "Slot: was_associated_with": [[921, "slot-was-associated-with"]], "Slot: was_generated_by": [[922, "slot-was-generated-by"]], "Enum: ConfigurationOption": [[924, "enum-configurationoption"]], "Class: PredicateTerm": [[938, "class-predicateterm"]], "Class: SubjectTerm": [[941, "class-subjectterm"]], "Class: Taxon": [[942, "class-taxon"]], "Class: TaxonConstraint": [[943, "class-taxonconstraint"]], "Slot: asserted": [[948, "slot-asserted"]], "Slot: candidate": [[949, "slot-candidate"]], "Slot: contradicted_by": [[951, "slot-contradicted-by"]], "Slot: evolutionary": [[953, "slot-evolutionary"]], "Taxon Constraints Reporting Datamodel": [[955, "taxon-constraints-reporting-datamodel"]], "Slot: never_in": [[957, "slot-never-in"]], "Slot: only_in": [[958, "slot-only-in"]], "Slot: predicates": [[960, "slot-predicates"]], "Slot: present_in": [[961, "slot-present-in"]], "Slot: present_in_ancestor_of": [[962, "slot-present-in-ancestor-of"]], "Slot: redundant": [[963, "slot-redundant"]], "Slot: redundant_with": [[964, "slot-redundant-with"]], "Slot: redundant_with_only_in": [[965, "slot-redundant-with-only-in"]], "Slot: sources": [[966, "slot-sources"], [1019, "slot-sources"]], "Slot: taxon": [[968, "slot-taxon"]], "Slot: unsatisfiable": [[970, "slot-unsatisfiable"]], "Slot: via_terms": [[971, "slot-via-terms"]], "Class: HasSpan": [[980, "class-hasspan"]], "Class: TextAnnotation": [[990, "class-textannotation"]], "Class: TextAnnotationConfiguration": [[991, "class-textannotationconfiguration"]], "Class: TextAnnotationResultSet": [[992, "class-textannotationresultset"]], "Class: TextualElement": [[993, "class-textualelement"]], "Slot: confidence": [[1000, "slot-confidence"], [1065, "slot-confidence"]], "Text Annotator Datamodel": [[1003, "text-annotator-datamodel"]], "Slot: info": [[1004, "slot-info"], [1070, "slot-info"]], "Slot: is_longest_match": [[1005, "slot-is-longest-match"]], "Slot: match_string": [[1007, "slot-match-string"]], "Slot: match_type": [[1008, "slot-match-type"]], "Slot: matches_whole_text": [[1009, "slot-matches-whole-text"]], "Slot: model": [[1010, "slot-model"]], "Slot: object_aliases": [[1011, "slot-object-aliases"]], "Slot: object_categories": [[1012, "slot-object-categories"]], "Slot: parent_document": [[1016, "slot-parent-document"]], "Slot: source_text": [[1018, "slot-source-text"]], "Slot: subject_end": [[1020, "slot-subject-end"]], "Slot: subject_start": [[1023, "slot-subject-start"]], "Slot: subject_text_id": [[1024, "slot-subject-text-id"]], "Slot: text": [[1025, "slot-text"]], "text-annotator": [[1026, "text-annotator"]], "Slot: token_exclusion_list": [[1027, "slot-token-exclusion-list"]], "Class: ConstraintComponent": [[1030, "class-constraintcomponent"]], "Class: ExternalReferenceValidationResult": [[1037, "class-externalreferencevalidationresult"]], "Class: MappingValidationResult": [[1042, "class-mappingvalidationresult"]], "Class: NamedResource": [[1043, "class-namedresource"]], "Class: RepairConfiguration": [[1048, "class-repairconfiguration"]], "Class: RepairOperation": [[1049, "class-repairoperation"]], "Class: RepairReport": [[1050, "class-repairreport"]], "Class: Report": [[1051, "class-report"]], "Class: Result": [[1052, "class-result"]], "Enum: SeverityOptions": [[1053, "enum-severityoptions"]], "Class: TypeSeverityKeyValue": [[1057, "class-typeseveritykeyvalue"]], "Class: ValidationConfiguration": [[1060, "class-validationconfiguration"]], "Class: ValidationReport": [[1061, "class-validationreport"]], "Class: ValidationResult": [[1062, "class-validationresult"]], "Enum: ValidationResultType": [[1063, "enum-validationresulttype"]], "Slot: dry_run": [[1066, "slot-dry-run"]], "Slot: http_response_code": [[1067, "slot-http-response-code"]], "Validation Results Datamodel": [[1069, "validation-results-datamodel"]], "Slot: instantiates": [[1071, "slot-instantiates"]], "Slot: max_number_results_per_type": [[1072, "slot-max-number-results-per-type"]], "Slot: modified": [[1073, "slot-modified"]], "Slot: number_of_attempts": [[1074, "slot-number-of-attempts"]], "Slot: object_info": [[1077, "slot-object-info"]], "Slot: object_str": [[1078, "slot-object-str"]], "Slot: problem": [[1081, "slot-problem"]], "Slot: prompt_info": [[1082, "slot-prompt-info"]], "Slot: repairs": [[1083, "slot-repairs"]], "Slot: schema_path": [[1085, "slot-schema-path"]], "Slot: severity": [[1086, "slot-severity"]], "Slot: subject_info": [[1090, "slot-subject-info"]], "Slot: successful": [[1091, "slot-successful"]], "Slot: suggested_modifications": [[1092, "slot-suggested-modifications"]], "Slot: suggested_predicate": [[1093, "slot-suggested-predicate"]], "Slot: time_checked": [[1094, "slot-time-checked"]], "Slot: type_severity_map": [[1096, "slot-type-severity-map"]], "Slot: validation_configuration": [[1099, "slot-validation-configuration"]], "validaton-results": [[1100, "validaton-results"]], "FAQ: Architecture and Design": [[1101, "faq-architecture-and-design"]], "What is an interface?": [[1101, "what-is-an-interface"]], "What is a Data Model?": [[1101, "what-is-a-data-model"]], "What is an iterator and why does OAK use them so much?": [[1101, "what-is-an-iterator-and-why-does-oak-use-them-so-much"]], "FAQ: Command Line": [[1102, "faq-command-line"]], "How do I see a list of commands?": [[1102, "how-do-i-see-a-list-of-commands"]], "How do I get help on a command?": [[1102, "how-do-i-get-help-on-a-command"]], "How do I get more examples of command line usage?": [[1102, "how-do-i-get-more-examples-of-command-line-usage"]], "I want to query an ontology, what do I pass for the --input option?": [[1102, "i-want-to-query-an-ontology-what-do-i-pass-for-the-input-option"]], "Why do I get a \u201cno such option\u201d error when I pass the \u201c\u2013input\u201d option?": [[1102, "why-do-i-get-a-no-such-option-error-when-i-pass-the-input-option"]], "What do the codes \u201ci\u201d and \u201cp\u201d mean?": [[1102, "what-do-the-codes-i-and-p-mean"]], "Can I pass a list of IDs (CURIEs) as input to a command?": [[1102, "can-i-pass-a-list-of-ids-curies-as-input-to-a-command"]], "Can I pass entity labels as command inputs?": [[1102, "can-i-pass-entity-labels-as-command-inputs"]], "Can I pass lexical queries as command inputs?": [[1102, "can-i-pass-lexical-queries-as-command-inputs"]], "Can I pass the results of graph queries as command inputs?": [[1102, "can-i-pass-the-results-of-graph-queries-as-command-inputs"]], "Can I make boolean combinations of query terms?": [[1102, "can-i-make-boolean-combinations-of-query-terms"]], "Can I chain commands together, unix-style?": [[1102, "can-i-chain-commands-together-unix-style"]], "What does the symbol @ mean in a query term list": [[1102, "what-does-the-symbol-mean-in-a-query-term-list"]], "Can I use the command line to visualize a subgraph?": [[1102, "can-i-use-the-command-line-to-visualize-a-subgraph"]], "Is there an over-arching philosophy or set of design principles to the OAK command line?": [[1102, "is-there-an-over-arching-philosophy-or-set-of-design-principles-to-the-oak-command-line"]], "The command isn\u2019t working the way I expected - how do I get help?": [[1102, "the-command-isn-t-working-the-way-i-expected-how-do-i-get-help"]], "FAQ: Contributing": [[1103, "faq-contributing"]], "How can I contribute?": [[1103, "how-can-i-contribute"]], "How do I stay involved?": [[1103, "how-do-i-stay-involved"]], "FAQ: General": [[1104, "faq-general"]], "What is OAK?": [[1104, "what-is-oak"]], "Are there any tutorials for OAK?": [[1104, "are-there-any-tutorials-for-oak"]], "Are there runnable examples of how to use OAK?": [[1104, "are-there-runnable-examples-of-how-to-use-oak"]], "I am familiar with both Python and Ontologies. Where should I start?": [[1104, "i-am-familiar-with-both-python-and-ontologies-where-should-i-start"]], "I find ontologies confusing. Is there a general guide to help me?": [[1104, "i-find-ontologies-confusing-is-there-a-general-guide-to-help-me"]], "Why is it called OAK?": [[1104, "why-is-it-called-oak"]], "How do I install OAK?": [[1104, "how-do-i-install-oak"]], "Can I use OAK if I don\u2019t know Python?": [[1104, "can-i-use-oak-if-i-don-t-know-python"]], "Can I contribute to OAK?": [[1104, "can-i-contribute-to-oak"]], "Is OAK just for bio-ontologies?": [[1104, "is-oak-just-for-bio-ontologies"]], "Can OAK access ontologies in ontology portals such as MatPortal or BioPortal?": [[1104, "can-oak-access-ontologies-in-ontology-portals-such-as-matportal-or-bioportal"]], "Can OAK access ontologies in triplestores such as OntoBee or Ubergraph?": [[1104, "can-oak-access-ontologies-in-triplestores-such-as-ontobee-or-ubergraph"]], "Can OAK access local files?": [[1104, "can-oak-access-local-files"]], "Can OAK access OBO Format files?": [[1104, "can-oak-access-obo-format-files"]], "Does OAK support all of OWL?": [[1104, "does-oak-support-all-of-owl"]], "Does OAK support reasoning?": [[1104, "does-oak-support-reasoning"]], "Can I use OAK to do graph queries over ontologies?": [[1104, "can-i-use-oak-to-do-graph-queries-over-ontologies"]], "Can I use OAK to do lexical search?": [[1104, "can-i-use-oak-to-do-lexical-search"]], "Can I use OAK as a text annotator?": [[1104, "can-i-use-oak-as-a-text-annotator"]], "FAQ": [[1105, "faq"]], "FAQ: Ontologies": [[1106, "faq-ontologies"]], "What is an ontology?": [[1106, "what-is-an-ontology"]], "Do we need ontologies now we have ChatGPT?": [[1106, "do-we-need-ontologies-now-we-have-chatgpt"]], "What is OWL?": [[1106, "what-is-owl"]], "What is OBO Format?": [[1106, "what-is-obo-format"]], "What is OBO": [[1106, "what-is-obo"]], "What\u2019s a synonym and how do I access them?": [[1106, "what-s-a-synonym-and-how-do-i-access-them"]], "Ancestor statistics": [[1106, "id2"], [1131, "id2"], [1137, "id1"]], "FAQ: Troubleshooting": [[1107, "faq-troubleshooting"]], "Why do I get a \u201cError: No such option: -i\u201d message": [[1107, "why-do-i-get-a-error-no-such-option-i-message"]], "How do I get a BioPortal API key?": [[1107, "how-do-i-get-a-bioportal-api-key"]], "My OBO Format file won\u2019t parse": [[1107, "my-obo-format-file-won-t-parse"]], "My OWL file takes too long to load": [[1107, "my-owl-file-takes-too-long-to-load"]], "My cached SQLite ontology is out of date": [[1107, "my-cached-sqlite-ontology-is-out-of-date"]], "I don\u2019t understand the interface/method I want to use": [[1107, "i-don-t-understand-the-interface-method-i-want-to-use"]], "Glossary": [[1108, "glossary"]], "Aliases and Synonyms": [[1109, "aliases-and-synonyms"]], "Use Cases": [[1109, "use-cases"]], "Search": [[1109, "search"], [1131, "search"], [1151, "search"], [1166, "search"]], "Text mining and NLP": [[1109, "text-mining-and-nlp"]], "Different aliases for different communities": [[1109, "different-aliases-for-different-communities"]], "Different Languages": [[1109, "different-languages"]], "Different approaches to representing synonym metadata": [[1109, "different-approaches-to-representing-synonym-metadata"]], "Representation of synonyms in OAK": [[1109, "representation-of-synonyms-in-oak"]], "Simple Core Model": [[1109, "simple-core-model"]], "HPO basic aliases": [[1109, "id1"]], "Obo Graph Data Model": [[1109, "obo-graph-data-model"]], "HPO full aliases": [[1109, "id2"]], "Associations and Curated Annotations": [[1110, "associations-and-curated-annotations"]], "Background": [[1110, "background"], [1120, "background"]], "Association support in OAK": [[1110, "association-support-in-oak"]], "Data Model": [[1110, "data-model"], [1120, "data-model"], [1174, "data-model"]], "Selecting association sources": [[1110, "selecting-association-sources"]], "Further reading": [[1110, "further-reading"], [1112, "further-reading"], [1115, "further-reading"], [1116, "further-reading"], [1118, "further-reading"], [1120, "further-reading"]], "OAK Basics": [[1111, "oak-basics"]], "What is an ontology and why would I want to access one?": [[1111, "what-is-an-ontology-and-why-would-i-want-to-access-one"]], "Ontology languages, standards, and formats": [[1111, "ontology-languages-standards-and-formats"]], "Core OAK concepts": [[1111, "core-oak-concepts"]], "Identifying entities: CURIEs and URIs": [[1112, "curies-and-uris"]], "Prefix maps": [[1112, "prefix-maps"]], "Querying prefixmaps": [[1112, "querying-prefixmaps"]], "Example prefixes": [[1112, "id1"]], "Non-default prefixmaps": [[1112, "non-default-prefixmaps"]], "Structure of identifiers": [[1112, "structure-of-identifiers"]], "The OAK Guide": [[1113, "the-oak-guide"]], "Learning More": [[1114, "learning-more"]], "Logical Definitions": [[1115, "logical-definitions"]], "Logical Definitions in OWL": [[1115, "logical-definitions-in-owl"]], "Genus-differentia form logical definitions": [[1115, "genus-differentia-form-logical-definitions"]], "The Obo Graphs Model": [[1115, "the-obo-graphs-model"]], "Querying for logical definitions in OAK": [[1115, "querying-for-logical-definitions-in-oak"]], "uberon nail logical definitions": [[1115, "id2"]], "Reasoning using logical definitions": [[1115, "reasoning-using-logical-definitions"]], "Logical definitions and design patterns": [[1115, "logical-definitions-and-design-patterns"]], "Generating logical definitions": [[1115, "generating-logical-definitions"]], "Analyzing logical definitions": [[1115, "analyzing-logical-definitions"]], "Validating logical definitions": [[1115, "validating-logical-definitions"]], "Mappings and Cross-References": [[1116, "mappings-and-cross-references"]], "Mappings in OAK": [[1116, "mappings-in-oak"]], "uberon sssom mappings": [[1116, "id1"]], "In Python": [[1116, "in-python"]], "Generating Mappings": [[1116, "generating-mappings"]], "Obsoletion": [[1117, "obsoletion"]], "Looking up obsoleted entities": [[1117, "looking-up-obsoleted-entities"]], "Conventions and standards": [[1117, "conventions-and-standards"]], "obsolete entities should not be in the signature of any logical axiom": [[1117, "obsolete-entities-should-not-be-in-the-signature-of-any-logical-axiom"]], "obsolete entities should be accompanied by metadata that provides additional context for humans and machines": [[1117, "obsolete-entities-should-be-accompanied-by-metadata-that-provides-additional-context-for-humans-and-machines"]], "Merged entities": [[1117, "merged-entities"]], "Further Reading": [[1117, "further-reading"]], "Primary Labels": [[1118, "primary-labels"]], "Looking up labels": [[1118, "looking-up-labels"]], "Custom label annotation properties": [[1118, "custom-label-annotation-properties"]], "Multilingual ontologies": [[1118, "multilingual-ontologies"]], "Other edge cases": [[1118, "other-edge-cases"]], "Relationships and Graphs": [[1119, "relationships-and-graphs"]], "Exploring relationships": [[1119, "exploring-relationships"]], "Graph Traversal and Relation Graph Reasoning": [[1119, "graph-traversal-and-relation-graph-reasoning"]], "Graph Traversal Strategies": [[1119, "graph-traversal-strategies"]], "Examples of where entailment yields more": [[1119, "examples-of-where-entailment-yields-more"]], "Examples of where graph traversal yields more ancestors than entailment": [[1119, "examples-of-where-graph-traversal-yields-more-ancestors-than-entailment"]], "Which strategy should I use?": [[1119, "which-strategy-should-i-use"]], "A note on entailed direct edges": [[1119, "a-note-on-entailed-direct-edges"]], "Computing Similarity between Entities": [[1120, "computing-similarity-between-entities"]], "Concepts": [[1120, "concepts"]], "Jaccard Similarity": [[1120, "jaccard-similarity"]], "Information Content": [[1120, "information-content"]], "Aggregate measures for comparing entities": [[1120, "aggregate-measures-for-comparing-entities"]], "Vector-based approaches": [[1120, "vector-based-approaches"]], "Implementations": [[1120, "implementations"], [1142, "implementations"], [1154, "implementations"]], "Default Implementation": [[1120, "default-implementation"]], "Ubergraph": [[1120, "ubergraph"], [1133, "ubergraph"]], "Semsimian": [[1120, "semsimian"]], "FHIR Conversions": [[1121, "fhir-conversions"]], "CLI": [[1121, "cli"]], "Config file": [[1121, "config-file"]], "How-To Guides": [[1122, "how-to-guides"]], "How to use Large Language Models (LLMs) with OAK": [[1125, "how-to-use-large-language-models-llms-with-oak"]], "LLM frameworks that use OAK": [[1125, "llm-frameworks-that-use-oak"]], "OntoGPT": [[1125, "ontogpt"]], "CurateGPT": [[1125, "curategpt"]], "Talisman": [[1125, "talisman"]], "Using OAK in conjunction with existing LLM tools": [[1125, "using-oak-in-conjunction-with-existing-llm-tools"]], "OAK LLM Adapter": [[1125, "oak-llm-adapter"]], "Annotation": [[1125, "annotation"], [1153, "annotation"], [1155, "annotation"], [1160, "annotation"]], "Suggesting Definitions": [[1125, "suggesting-definitions"]], "Validating Mappings": [[1125, "validating-mappings"]], "Selecting alternative models": [[1125, "selecting-alternative-models"]], "Installing LLM plugins": [[1125, "installing-llm-plugins"]], "Mixtral via Ollama and LiteLLM": [[1125, "mixtral-via-ollama-and-litellm"]], "Mixtral via groq and LiteLLM": [[1125, "mixtral-via-groq-and-litellm"]], "How to Validate an OBO ontology using Obo Metadata Ontology schema": [[1126, "how-to-validate-an-obo-ontology-using-obo-metadata-ontology-schema"]], "Steps": [[1126, "steps"]], "Step 1: Obtain the sqlite version of the ontology": [[1126, "step-1-obtain-the-sqlite-version-of-the-ontology"]], "Step 2: Install oaklib": [[1126, "step-2-install-oaklib"]], "Step 3: Validate an individual ontology": [[1126, "step-3-validate-an-individual-ontology"]], "Step 3 (alternative): Validate multiple ontologies": [[1126, "step-3-alternative-validate-multiple-ontologies"]], "Caveats": [[1126, "caveats"]], "Using your own schema": [[1126, "using-your-own-schema"]], "How this works": [[1126, "how-this-works"], [1135, "how-this-works"]], "Analysis": [[1126, "analysis"]], "How to write a plugin": [[1128, "how-to-write-a-plugin"]], "What is a plugin?": [[1128, "what-is-a-plugin"]], "An example plugin": [[1128, "an-example-plugin"]], "Creating a plugin": [[1128, "creating-a-plugin"]], "Discuss on the issue tracker": [[1128, "discuss-on-the-issue-tracker"]], "Create a new project": [[1128, "create-a-new-project"], [1132, "create-a-new-project"]], "Implement one or more interfaces": [[1128, "implement-one-or-more-interfaces"]], "Implement a selector": [[1128, "implement-a-selector"]], "Write tests": [[1128, "write-tests"]], "Ontology Access Kit (OAK) Documentation": [[1129, "ontology-access-kit-oak-documentation"]], "Indices and tables": [[1129, "indices-and-tables"]], "Tutorial": [[1130, "tutorial"]], "Part 1: Getting Started": [[1131, "part-1-getting-started"]], "Installation": [[1131, "installation"]], "Install from PyPI": [[1131, "install-from-pypi"]], "Run the OAK command": [[1131, "run-the-oak-command"]], "Basics": [[1131, "basics"]], "Query the OBO Library": [[1131, "query-the-obo-library"]], "Working with local files": [[1131, "working-with-local-files"]], "Introduction to graphs and trees": [[1131, "introduction-to-graphs-and-trees"]], "Fetching ancestors": [[1131, "fetching-ancestors"]], "Predicate Abbreviations": [[1131, "predicate-abbreviations"]], "Ancestor Statistics": [[1131, "ancestor-statistics"]], "Oak Trees": [[1131, "oak-trees"]], "Advanced Search": [[1131, "advanced-search"]], "Using search terms as parameters": [[1131, "using-search-terms-as-parameters"]], "Chaining Commands": [[1131, "chaining-commands"]], "Visualization": [[1131, "visualization"]], "Using other backends": [[1131, "using-other-backends"]], "Using Ubergraph": [[1131, "using-ubergraph"]], "Using Ontobee": [[1131, "using-ontobee"]], "Using BioPortal and OntoPortal": [[1131, "using-bioportal-and-ontoportal"]], "Annotate results": [[1131, "id3"]], "Using OLS": [[1131, "using-ols"]], "OLS SSSOM": [[1131, "id4"]], "Next steps": [[1131, "next-steps"]], "Part 2: Basic Python": [[1132, "part-2-basic-python"]], "Install Poetry": [[1132, "install-poetry"]], "Basic Concepts": [[1132, "basic-concepts"]], "Code the first example": [[1132, "code-the-first-example"]], "Extending the example": [[1132, "extending-the-example"]], "Part 3: Triplestore Backends": [[1133, "part-3-triplestore-backends"]], "Triplestore Concepts": [[1133, "triplestore-concepts"]], "Connecting": [[1133, "connecting"], [1166, "connecting"]], "Basic Operations": [[1133, "basic-operations"]], "Relationships": [[1133, "relationships"]], "Part 4: OboGraphs": [[1134, "part-4-obographs"]], "OboGraphs": [[1134, "obographs"]], "OboGraph Interface": [[1134, "obograph-interface"], [1175, "obograph-interface"]], "Code examples": [[1134, "code-examples"]], "Part 5: Graph Visualization": [[1135, "part-5-graph-visualization"]], "Install Graphviz": [[1135, "install-graphviz"]], "Install OBOGraphViz": [[1135, "install-obographviz"]], "Command Line Usage": [[1135, "command-line-usage"], [1145, "command-line-usage"], [1150, "command-line-usage"]], "Programmatic usage": [[1135, "programmatic-usage"]], "Part 6: Working With OWL": [[1136, "part-6-working-with-owl"]], "OWL Datamodel": [[1136, "owl-datamodel"]], "OwlInterface": [[1136, "owlinterface"]], "ROBOT Plugin": [[1136, "robot-plugin"]], "Part 7: SQLite files": [[1137, "part-7-sqlite-files"]], "Download a SQLite file": [[1137, "download-a-sqlite-file"]], "Example": [[1137, "example"]], "Fetching ready-made SQLite files": [[1137, "fetching-ready-made-sqlite-files"]], "Building your own SQLite files": [[1137, "building-your-own-sqlite-files"]], "With docker": [[1137, "with-docker"]], "Without docker": [[1137, "without-docker"]], "Validating an ontology": [[1137, "validating-an-ontology"]], "Other RDBMSs": [[1137, "other-rdbmss"]], "Python ORM": [[1137, "python-orm"]], "Part 8: Applying Changes to Ontologies": [[1138, "part-8-applying-changes-to-ontologies"]], "About KGCL": [[1138, "about-kgcl"]], "Example: Sqlite3": [[1138, "example-sqlite3"]], "Example: OBO Files": [[1138, "example-obo-files"]], "Introduction": [[1139, "introduction"]], "Basic Python Example": [[1139, "basic-python-example"]], "Basic Command Line Example": [[1139, "basic-command-line-example"]], "Jupyter Notebooks": [[1141, "jupyter-notebooks"]], "Architecture": [[1142, "architecture"]], "Ontology Interfaces": [[1142, "ontology-interfaces"]], "Other Interfaces": [[1142, "other-interfaces"]], "Example: OWL Ontology Interface": [[1142, "example-owl-ontology-interface"]], "Partial and Complete Implementation": [[1142, "partial-and-complete-implementation"]], "Best Practice": [[1143, "best-practice"]], "External Services": [[1143, "external-services"]], "Iterators": [[1143, "iterators"]], "Weaving calls together": [[1143, "weaving-calls-together"]], "Chunking": [[1143, "chunking"]], "Abstract Class": [[1144, "abstract-class"]], "Converters": [[1145, "converters"]], "Converting from Obo Graphs": [[1145, "converting-from-obo-graphs"]], "OBO Graph to CX Converter": [[1146, "obo-graph-to-cx-converter"]], "OBO Graph to FHIR Converter": [[1147, "obo-graph-to-fhir-converter"]], "OBO Graph to OBO Format Converter": [[1148, "obo-graph-to-obo-format-converter"]], "OBO Graph to OWL Converter": [[1149, "obo-graph-to-owl-converter"]], "Aggregator Adapter": [[1150, "aggregator-adapter"]], "Documentation": [[1150, "documentation"], [1158, "documentation"]], "Bioportal Adapter": [[1151, "bioportal-adapter"]], "API Keys": [[1151, "api-keys"]], "Command Line Examples": [[1151, "command-line-examples"], [1153, "command-line-examples"], [1155, "command-line-examples"], [1160, "command-line-examples"], [1162, "command-line-examples"]], "Code": [[1151, "code"], [1153, "code"], [1155, "code"], [1156, "code"], [1157, "code"], [1159, "code"], [1160, "code"], [1161, "code"], [1163, "code"], [1164, "code"], [1165, "code"], [1166, "code"]], "FunOwl Adapter": [[1152, "funowl-adapter"]], "Gilda Adapter": [[1153, "gilda-adapter"]], "LLM Adapter": [[1155, "llm-adapter"]], "Validation of Mappings": [[1155, "validation-of-mappings"]], "OBO Graph Adapter": [[1156, "obo-graph-adapter"]], "About": [[1156, "about"], [1159, "about"], [1161, "about"], [1163, "about"], [1166, "about"]], "Initialization": [[1156, "initialization"], [1161, "initialization"], [1163, "initialization"], [1165, "initialization"]], "Ontology Lookup Service (OLS) Adapter": [[1157, "ontology-lookup-service-ols-adapter"]], "Ontobee Adapter": [[1158, "ontobee-adapter"]], "Notes": [[1158, "notes"]], "Owlery Adapter": [[1159, "owlery-adapter"]], "PantherDB Adapter": [[1160, "pantherdb-adapter"]], "Enrichment": [[1160, "enrichment"]], "Mapping": [[1160, "mapping"]], "Pronto / OBO Files Adapter": [[1161, "pronto-obo-files-adapter"]], "Input Selector": [[1161, "input-selector"]], "ROBOT Template Adapter": [[1162, "robot-template-adapter"]], "Basic operations": [[1162, "basic-operations"]], "Applying KGCL commands": [[1162, "applying-kgcl-commands"]], "Simple OBO Adapter": [[1163, "simple-obo-adapter"]], "Sparql Adapter": [[1164, "sparql-adapter"]], "SQL Database Adapter": [[1165, "sql-database-adapter"]], "SQL Alchemy ORM Model": [[1165, "sql-alchemy-orm-model"]], "Ubergraph Adapter": [[1166, "ubergraph-adapter"]], "Interfaces Implemented": [[1166, "interfaces-implemented"]], "OAK Library Documentation": [[1167, "oak-library-documentation"]], "Association Provider Interface": [[1168, "association-provider-interface"]], "Command Line Use": [[1168, "command-line-use"], [1174, "command-line-use"]], "Basic Ontology Interface": [[1169, "basic-ontology-interface"]], "Class Enrichment Calculation Interface": [[1170, "class-enrichment-calculation-interface"]], "Differ Interface": [[1171, "differ-interface"]], "Dumper Interface": [[1172, "dumper-interface"]], "Interfaces": [[1173, "interfaces"]], "Mapping Provider Interface": [[1174, "mapping-provider-interface"]], "OWL Interface": [[1176, "owl-interface"]], "Patcher Interface": [[1177, "patcher-interface"]], "Relation Graph": [[1178, "relation-graph"]], "Search Interface": [[1179, "search-interface"]], "Semantic Similarity Interface": [[1180, "semantic-similarity-interface"]], "Subsetting": [[1181, "subsetting"]], "Summary Statistics": [[1182, "summary-statistics"]], "Text Annotator Interface": [[1183, "text-annotator-interface"]], "Validator Interface": [[1184, "validator-interface"]], "Ontology Adapter Selectors": [[1185, "ontology-adapter-selectors"]], "Syntax": [[1185, "syntax"]], "Schemes": [[1185, "schemes"]], "pronto": [[1185, "pronto"]], "prontolib": [[1185, "prontolib"]], "sqlite": [[1185, "sqlite"]], "obosqlite": [[1185, "obosqlite"]], "ontobee": [[1185, "ontobee"]], "ols": [[1185, "ols"]], "bioportal": [[1185, "bioportal"]], "funowl": [[1185, "funowl"]], "Functions": [[1185, "functions"]], "oaklib.utilities.apikey_manager": [[1186, "module-oaklib.utilities.apikey_manager"]], "oaklib.utilities.graph.networkx_bridge": [[1187, "module-oaklib.utilities.graph.networkx_bridge"]], "Utilities for working with networkx": [[1187, "utilities-for-working-with-networkx"]], "oaklib.utilities.graph.relationship_walker": [[1188, "module-oaklib.utilities.graph.relationship_walker"]], "Utilities for traversing Ontology Graphs": [[1188, "utilities-for-traversing-ontology-graphs"]], "oaklib.utilities.lexical.lexical_indexer": [[1189, "module-oaklib.utilities.lexical.lexical_indexer"]], "Lexical Utilities": [[1189, "lexical-utilities"]], "oaklib.utilities.obograph_utils": [[1190, "module-oaklib.utilities.obograph_utils"]], "Utilities for the OBOGraph Datamodel": [[1190, "utilities-for-the-obograph-datamodel"]], "oaklib.utilities.subsets.slimmer_utils": [[1191, "module-oaklib.utilities.subsets.slimmer_utils"]], "Utilities for working with ontology subsets (slims)": [[1191, "utilities-for-working-with-ontology-subsets-slims"]], "oaklib.utilities.table_filler": [[1192, "module-oaklib.utilities.table_filler"]], "oaklib.utilities.taxon": [[1193, "module-oaklib.utilities.taxon"]], "Utilities": [[1194, "utilities"]], "Layering on RDF/OWL": [[1195, "layering-on-rdf-owl"]], "CURIEs, URIs, and prefixmaps": [[1195, "curies-uris-and-prefixmaps"]], "Relationships between entities": [[1195, "relationships-between-entities"]], "Metadata about entities": [[1195, "metadata-about-entities"]], "Challenges": [[1195, "challenges"]], "OMO": [[1195, "omo"]], "Ontology portals": [[1195, "ontology-portals"]], "OAK Approach": [[1195, "oak-approach"]], "Labels": [[1195, "labels"]], "Obsoletion and obsoletion metadata": [[1195, "obsoletion-and-obsoletion-metadata"]], "Search Syntax": [[1196, "search-syntax"]], "Boolean Combinations": [[1196, "boolean-combinations"]], "Search Datamodel": [[1196, "search-datamodel"]]}, "indexentries": {"--about": [[0, "cmdoption-runoak-axioms-about"]], "--adapter-mapping": [[0, "cmdoption-runoak-validate-mappings-adapter-mapping"]], "--add": [[0, "cmdoption-runoak-a"]], "--add-closure-fields": [[0, "cmdoption-runoak-associations-add-closure-fields"], [0, "cmdoption-runoak-associations-counts-add-closure-fields"]], "--add-labels": [[0, "cmdoption-runoak-lexmatch-add-labels"]], "--add-mrcas": [[0, "cmdoption-runoak-tree-add-mrcas"], [0, "cmdoption-runoak-viz-add-mrcas"]], "--additional-metadata": [[0, "cmdoption-runoak-definitions-additional-metadata"], [0, "cmdoption-runoak-term-metadata-additional-metadata"]], "--all": [[0, "cmdoption-runoak-ontology-metadata-all"], [0, "cmdoption-runoak-ontology-versions-all"], [0, "cmdoption-runoak-taxon-constraints-A"]], "--all-languages": [[0, "cmdoption-runoak-labels-all-languages"]], "--allow-labels": [[0, "cmdoption-runoak-enrichment-allow-labels"]], "--allow-missing": [[0, "cmdoption-runoak-fill-table-allow-missing"]], "--analyze": [[0, "cmdoption-runoak-generate-logical-definitions-analyze"]], "--annotated-roots": [[0, "cmdoption-runoak-roots-A"]], "--apply-patch": [[0, "cmdoption-runoak-generate-definitions-apply-patch"], [0, "cmdoption-runoak-generate-synonyms-apply-patch"], [0, "cmdoption-runoak-synonymize-apply-patch"]], "--association-predicates": [[0, "cmdoption-runoak-associations-association-predicates"], [0, "cmdoption-runoak-associations-counts-association-predicates"], [0, "cmdoption-runoak-associations-matrix-association-predicates"], [0, "cmdoption-runoak-enrichment-association-predicates"]], "--associations": [[0, "cmdoption-runoak-diff-associations-g"], [0, "cmdoption-runoak-g"]], "--associations-type": [[0, "cmdoption-runoak-G"]], "--autolabel": [[0, "cmdoption-runoak-associations-autolabel"], [0, "cmdoption-runoak-associations-counts-autolabel"], [0, "cmdoption-runoak-associations-matrix-autolabel"], [0, "cmdoption-runoak-definitions-autolabel"], [0, "cmdoption-runoak-diff-associations-autolabel"], [0, "cmdoption-runoak-diff-via-mappings-autolabel"], [0, "cmdoption-runoak-disjoints-autolabel"], [0, "cmdoption-runoak-enrichment-autolabel"], [0, "cmdoption-runoak-fill-table-autolabel"], [0, "cmdoption-runoak-generate-disjoints-autolabel"], [0, "cmdoption-runoak-generate-logical-definitions-autolabel"], [0, "cmdoption-runoak-logical-definitions-autolabel"], [0, "cmdoption-runoak-mappings-autolabel"], [0, "cmdoption-runoak-normalize-autolabel"], [0, "cmdoption-runoak-paths-autolabel"], [0, "cmdoption-runoak-query-autolabel"], [0, "cmdoption-runoak-relationships-autolabel"], [0, "cmdoption-runoak-rollup-autolabel"], [0, "cmdoption-runoak-search-autolabel"], [0, "cmdoption-runoak-similarity-autolabel"], [0, "cmdoption-runoak-similarity-pair-autolabel"], [0, "cmdoption-runoak-termset-similarity-autolabel"], [0, "cmdoption-runoak-validate-mappings-autolabel"]], "--autosave": [[0, "cmdoption-runoak-autosave"]], "--axiom-type": [[0, "cmdoption-runoak-axioms-axiom-type"]], "--background-file": [[0, "cmdoption-runoak-enrichment-B"]], "--bidirectional": [[0, "cmdoption-runoak-diff-via-mappings-bidirectional"]], "--category-system": [[0, "cmdoption-runoak-term-categories-category-system"]], "--change-type": [[0, "cmdoption-runoak-diff-change-type"]], "--changes-format": [[0, "cmdoption-runoak-apply-changes-format"]], "--changes-input": [[0, "cmdoption-runoak-apply-changes-input"]], "--changes-output": [[0, "cmdoption-runoak-apply-changes-output"]], "--comment": [[0, "cmdoption-runoak-fill-table-comment"]], "--compare-with": [[0, "cmdoption-runoak-statistics-X"]], "--config-file": [[0, "cmdoption-runoak-dump-c"], [0, "cmdoption-runoak-transform-c"]], "--configuration-file": [[0, "cmdoption-runoak-annotate-C"], [0, "cmdoption-runoak-validate-mappings-C"]], "--configure": [[0, "cmdoption-runoak-paths-C"], [0, "cmdoption-runoak-tree-C"], [0, "cmdoption-runoak-viz-C"]], "--contributor": [[0, "cmdoption-runoak-apply-contributor"]], "--cutoff": [[0, "cmdoption-runoak-enrichment-cutoff"], [0, "cmdoption-runoak-validate-cutoff"], [0, "cmdoption-runoak-validate-multiple-cutoff"]], "--dangling": [[0, "cmdoption-runoak-extract-dangling"]], "--days-old": [[0, "cmdoption-runoak-cache-clear-days-old"]], "--delimiter": [[0, "cmdoption-runoak-fill-table-delimiter"]], "--direct": [[0, "cmdoption-runoak-taxon-constraints-direct"]], "--directed": [[0, "cmdoption-runoak-paths-directed"]], "--direction": [[0, "cmdoption-runoak-relationships-direction"]], "--display": [[0, "cmdoption-runoak-definitions-D"], [0, "cmdoption-runoak-descendants-D"], [0, "cmdoption-runoak-info-D"], [0, "cmdoption-runoak-labels-D"], [0, "cmdoption-runoak-tree-D"]], "--down": [[0, "cmdoption-runoak-tree-down"], [0, "cmdoption-runoak-viz-down"]], "--dry-run": [[0, "cmdoption-runoak-apply-dry-run"], [0, "cmdoption-runoak-lint-dry-run"]], "--endpoint": [[0, "cmdoption-runoak-set-apikey-e"]], "--enforce-canonical-ordering": [[0, "cmdoption-runoak-dump-enforce-canonical-ordering"]], "--ensure-strict-prefixes": [[0, "cmdoption-runoak-lexmatch-ensure-strict-prefixes"]], "--evolution-file": [[0, "cmdoption-runoak-apply-taxon-constraints-E"]], "--exclude-existing": [[0, "cmdoption-runoak-generate-disjoints-exclude-existing"]], "--exclude-predicates": [[0, "cmdoption-runoak-paths-exclude-predicates"]], "--exclude-tokens": [[0, "cmdoption-runoak-annotate-x"]], "--expand": [[0, "cmdoption-runoak-apply-expand"], [0, "cmdoption-runoak-apply-obsolete-expand"]], "--fill": [[0, "cmdoption-runoak-generate-logical-definitions-fill"]], "--filter": [[0, "cmdoption-runoak-associations-counts-F"]], "--filter-category-identical": [[0, "cmdoption-runoak-diff-via-mappings-filter-category-identical"]], "--filter-obsoletes": [[0, "cmdoption-runoak-leafs-filter-obsoletes"], [0, "cmdoption-runoak-singletons-filter-obsoletes"], [0, "cmdoption-runoak-terms-filter-obsoletes"]], "--filter-redundant": [[0, "cmdoption-runoak-enrichment-filter-redundant"]], "--gap-fill": [[0, "cmdoption-runoak-tree-gap-fill"], [0, "cmdoption-runoak-viz-gap-fill"]], "--graph-traversal-method": [[0, "cmdoption-runoak-ancestors-M"], [0, "cmdoption-runoak-apply-taxon-constraints-M"], [0, "cmdoption-runoak-descendants-M"], [0, "cmdoption-runoak-taxon-constraints-M"]], "--group-by": [[0, "cmdoption-runoak-associations-counts-group-by"], [0, "cmdoption-runoak-diff-associations-group-by"]], "--group-by-defined-by": [[0, "cmdoption-runoak-diff-group-by-defined-by"], [0, "cmdoption-runoak-statistics-group-by-defined-by"]], "--group-by-obo-namespace": [[0, "cmdoption-runoak-diff-group-by-obo-namespace"], [0, "cmdoption-runoak-statistics-group-by-obo-namespace"]], "--group-by-prefix": [[0, "cmdoption-runoak-diff-group-by-prefix"], [0, "cmdoption-runoak-statistics-group-by-prefix"]], "--group-by-property": [[0, "cmdoption-runoak-diff-group-by-property"], [0, "cmdoption-runoak-statistics-group-by-property"]], "--has-prefix": [[0, "cmdoption-runoak-roots-P"], [0, "cmdoption-runoak-statistics-P"]], "--if-absent": [[0, "cmdoption-runoak-associations-if-absent"], [0, "cmdoption-runoak-definitions-if-absent"], [0, "cmdoption-runoak-labels-if-absent"], [0, "cmdoption-runoak-logical-definitions-if-absent"], [0, "cmdoption-runoak-relationships-if-absent"]], "--ignore-invalid-changes": [[0, "cmdoption-runoak-apply-ignore-invalid-changes"], [0, "cmdoption-runoak-apply-obsolete-ignore-invalid-changes"]], "--import-depth": [[0, "cmdoption-runoak-import-depth"]], "--include-abox": [[0, "cmdoption-runoak-relationships-include-abox"]], "--include-aliases": [[0, "cmdoption-runoak-annotate-include-aliases"]], "--include-entailed": [[0, "cmdoption-runoak-relationships-include-entailed"]], "--include-entities": [[0, "cmdoption-runoak-associations-matrix-include-entities"]], "--include-identity-mappings": [[0, "cmdoption-runoak-diff-via-mappings-include-identity-mappings"]], "--include-merged": [[0, "cmdoption-runoak-obsoletes-include-merged"]], "--include-metadata": [[0, "cmdoption-runoak-extract-include-metadata"], [0, "cmdoption-runoak-relationships-include-metadata"]], "--include-predicates": [[0, "cmdoption-runoak-paths-include-predicates"]], "--include-redundant": [[0, "cmdoption-runoak-taxon-constraints-include-redundant"]], "--include-residuals": [[0, "cmdoption-runoak-statistics-include-residuals"]], "--include-tbox": [[0, "cmdoption-runoak-relationships-include-tbox"]], "--information-content-file": [[0, "cmdoption-runoak-similarity-information-content-file"], [0, "cmdoption-runoak-termset-similarity-information-content-file"]], "--input": [[0, "cmdoption-runoak-i"]], "--input-type": [[0, "cmdoption-runoak-I"]], "--intra": [[0, "cmdoption-runoak-diff-via-mappings-intra"]], "--label-fields": [[0, "cmdoption-runoak-query-L"]], "--lexical-index-file": [[0, "cmdoption-runoak-annotate-L"], [0, "cmdoption-runoak-lexmatch-L"]], "--limit": [[0, "cmdoption-runoak-associations-counts-L"]], "--main-score-field": [[0, "cmdoption-runoak-similarity-main-score-field"]], "--mapper": [[0, "cmdoption-runoak-mappings-mapper"]], "--mapping-input": [[0, "cmdoption-runoak-diff-via-mappings-mapping-input"]], "--maps-to-source": [[0, "cmdoption-runoak-mappings-M"], [0, "cmdoption-runoak-normalize-M"]], "--match-column": [[0, "cmdoption-runoak-annotate-A"]], "--matches-whole-text": [[0, "cmdoption-runoak-annotate-W"]], "--matrix-axes": [[0, "cmdoption-runoak-logical-definitions-matrix-axes"]], "--max-hops": [[0, "cmdoption-runoak-tree-max-hops"], [0, "cmdoption-runoak-viz-max-hops"]], "--merge": [[0, "cmdoption-runoak-merge"]], "--meta": [[0, "cmdoption-runoak-viz-meta"]], "--metamodel-mappings": [[0, "cmdoption-runoak-metamodel-mappings"]], "--min-ancestor-information-content": [[0, "cmdoption-runoak-similarity-min-ancestor-information-content"]], "--min-descendants": [[0, "cmdoption-runoak-generate-disjoints-M"]], "--min-facet-count": [[0, "cmdoption-runoak-associations-counts-min-facet-count"]], "--min-jaccard-similarity": [[0, "cmdoption-runoak-similarity-min-jaccard-similarity"]], "--missing-value-token": [[0, "cmdoption-runoak-fill-table-missing-value-token"]], "--model": [[0, "cmdoption-runoak-annotate-m"]], "--named-classes-only": [[0, "cmdoption-runoak-disjoints-named-classes-only"]], "--named-prefix-map": [[0, "cmdoption-runoak-named-prefix-map"]], "--narrow": [[0, "cmdoption-runoak-paths-narrow"]], "--new-date": [[0, "cmdoption-runoak-diff-associations-new-date"]], "--no-a": [[0, "cmdoption-runoak-roots-A"], [0, "cmdoption-runoak-taxon-constraints-A"]], "--no-w": [[0, "cmdoption-runoak-annotate-W"]], "--no-add-closure-fields": [[0, "cmdoption-runoak-associations-add-closure-fields"], [0, "cmdoption-runoak-associations-counts-add-closure-fields"]], "--no-add-labels": [[0, "cmdoption-runoak-lexmatch-add-labels"]], "--no-add-mrcas": [[0, "cmdoption-runoak-tree-add-mrcas"], [0, "cmdoption-runoak-viz-add-mrcas"]], "--no-additional-metadata": [[0, "cmdoption-runoak-definitions-additional-metadata"], [0, "cmdoption-runoak-term-metadata-additional-metadata"]], "--no-all": [[0, "cmdoption-runoak-ontology-metadata-all"], [0, "cmdoption-runoak-ontology-versions-all"], [0, "cmdoption-runoak-taxon-constraints-A"]], "--no-all-languages": [[0, "cmdoption-runoak-labels-all-languages"]], "--no-allow-labels": [[0, "cmdoption-runoak-enrichment-allow-labels"]], "--no-allow-missing": [[0, "cmdoption-runoak-fill-table-allow-missing"]], "--no-analyze": [[0, "cmdoption-runoak-generate-logical-definitions-analyze"]], "--no-annotated-roots": [[0, "cmdoption-runoak-roots-A"]], "--no-apply-patch": [[0, "cmdoption-runoak-generate-definitions-apply-patch"], [0, "cmdoption-runoak-generate-synonyms-apply-patch"], [0, "cmdoption-runoak-synonymize-apply-patch"]], "--no-autolabel": [[0, "cmdoption-runoak-associations-autolabel"], [0, "cmdoption-runoak-associations-counts-autolabel"], [0, "cmdoption-runoak-associations-matrix-autolabel"], [0, "cmdoption-runoak-definitions-autolabel"], [0, "cmdoption-runoak-diff-associations-autolabel"], [0, "cmdoption-runoak-diff-via-mappings-autolabel"], [0, "cmdoption-runoak-disjoints-autolabel"], [0, "cmdoption-runoak-enrichment-autolabel"], [0, "cmdoption-runoak-fill-table-autolabel"], [0, "cmdoption-runoak-generate-disjoints-autolabel"], [0, "cmdoption-runoak-generate-logical-definitions-autolabel"], [0, "cmdoption-runoak-logical-definitions-autolabel"], [0, "cmdoption-runoak-mappings-autolabel"], [0, "cmdoption-runoak-normalize-autolabel"], [0, "cmdoption-runoak-paths-autolabel"], [0, "cmdoption-runoak-query-autolabel"], [0, "cmdoption-runoak-relationships-autolabel"], [0, "cmdoption-runoak-rollup-autolabel"], [0, "cmdoption-runoak-search-autolabel"], [0, "cmdoption-runoak-similarity-autolabel"], [0, "cmdoption-runoak-similarity-pair-autolabel"], [0, "cmdoption-runoak-termset-similarity-autolabel"], [0, "cmdoption-runoak-validate-mappings-autolabel"]], "--no-autosave": [[0, "cmdoption-runoak-autosave"]], "--no-bidirectional": [[0, "cmdoption-runoak-diff-via-mappings-bidirectional"]], "--no-dangling": [[0, "cmdoption-runoak-extract-dangling"]], "--no-direct": [[0, "cmdoption-runoak-taxon-constraints-direct"]], "--no-directed": [[0, "cmdoption-runoak-paths-directed"]], "--no-down": [[0, "cmdoption-runoak-tree-down"], [0, "cmdoption-runoak-viz-down"]], "--no-dry-run": [[0, "cmdoption-runoak-apply-dry-run"], [0, "cmdoption-runoak-lint-dry-run"]], "--no-enforce-canonical-ordering": [[0, "cmdoption-runoak-dump-enforce-canonical-ordering"]], "--no-ensure-strict-prefixes": [[0, "cmdoption-runoak-lexmatch-ensure-strict-prefixes"]], "--no-exclude-existing": [[0, "cmdoption-runoak-generate-disjoints-exclude-existing"]], "--no-expand": [[0, "cmdoption-runoak-apply-expand"], [0, "cmdoption-runoak-apply-obsolete-expand"]], "--no-fill": [[0, "cmdoption-runoak-generate-logical-definitions-fill"]], "--no-filter-category-identical": [[0, "cmdoption-runoak-diff-via-mappings-filter-category-identical"]], "--no-filter-obsoletes": [[0, "cmdoption-runoak-leafs-filter-obsoletes"], [0, "cmdoption-runoak-singletons-filter-obsoletes"], [0, "cmdoption-runoak-terms-filter-obsoletes"]], "--no-filter-redundant": [[0, "cmdoption-runoak-enrichment-filter-redundant"]], "--no-gap-fill": [[0, "cmdoption-runoak-tree-gap-fill"], [0, "cmdoption-runoak-viz-gap-fill"]], "--no-group-by-defined-by": [[0, "cmdoption-runoak-diff-group-by-defined-by"], [0, "cmdoption-runoak-statistics-group-by-defined-by"]], "--no-group-by-obo-namespace": [[0, "cmdoption-runoak-diff-group-by-obo-namespace"], [0, "cmdoption-runoak-statistics-group-by-obo-namespace"]], "--no-group-by-prefix": [[0, "cmdoption-runoak-diff-group-by-prefix"], [0, "cmdoption-runoak-statistics-group-by-prefix"]], "--no-ignore-invalid-changes": [[0, "cmdoption-runoak-apply-ignore-invalid-changes"], [0, "cmdoption-runoak-apply-obsolete-ignore-invalid-changes"]], "--no-include-abox": [[0, "cmdoption-runoak-relationships-include-abox"]], "--no-include-aliases": [[0, "cmdoption-runoak-annotate-include-aliases"]], "--no-include-entailed": [[0, "cmdoption-runoak-relationships-include-entailed"]], "--no-include-entities": [[0, "cmdoption-runoak-associations-matrix-include-entities"]], "--no-include-identity-mappings": [[0, "cmdoption-runoak-diff-via-mappings-include-identity-mappings"]], "--no-include-merged": [[0, "cmdoption-runoak-obsoletes-include-merged"]], "--no-include-metadata": [[0, "cmdoption-runoak-extract-include-metadata"], [0, "cmdoption-runoak-relationships-include-metadata"]], "--no-include-predicates": [[0, "cmdoption-runoak-paths-include-predicates"]], "--no-include-redundant": [[0, "cmdoption-runoak-taxon-constraints-include-redundant"]], "--no-include-residuals": [[0, "cmdoption-runoak-statistics-include-residuals"]], "--no-include-tbox": [[0, "cmdoption-runoak-relationships-include-tbox"]], "--no-intra": [[0, "cmdoption-runoak-diff-via-mappings-intra"]], "--no-matches-whole-text": [[0, "cmdoption-runoak-annotate-W"]], "--no-merge": [[0, "cmdoption-runoak-merge"]], "--no-meta": [[0, "cmdoption-runoak-viz-meta"]], "--no-named-classes-only": [[0, "cmdoption-runoak-disjoints-named-classes-only"]], "--no-narrow": [[0, "cmdoption-runoak-paths-narrow"]], "--no-obo-model": [[0, "cmdoption-runoak-aliases-obo-model"]], "--no-ontology-only": [[0, "cmdoption-runoak-enrichment-ontology-only"]], "--no-overwrite": [[0, "cmdoption-runoak-apply-overwrite"]], "--no-parse": [[0, "cmdoption-runoak-generate-logical-definitions-parse"]], "--no-pivot-languages": [[0, "cmdoption-runoak-labels-pivot-languages"]], "--no-profile": [[0, "cmdoption-runoak-profile"]], "--no-quiet": [[0, "cmdoption-runoak-q"]], "--no-recreate": [[0, "cmdoption-runoak-lexmatch-recreate"]], "--no-replace": [[0, "cmdoption-runoak-migrate-curies-replace"]], "--no-show-extract": [[0, "cmdoption-runoak-generate-logical-definitions-show-extract"]], "--no-show-migration-relationships": [[0, "cmdoption-runoak-obsoletes-show-migration-relationships"]], "--no-simple": [[0, "cmdoption-runoak-diff-simple"]], "--no-skip-ontology-rules": [[0, "cmdoption-runoak-validate-skip-ontology-rules"]], "--no-skip-structural-validation": [[0, "cmdoption-runoak-validate-skip-structural-validation"]], "--no-skip-text-annotation": [[0, "cmdoption-runoak-validate-definitions-skip-text-annotation"]], "--no-stacktrace": [[0, "cmdoption-runoak-stacktrace"]], "--no-statistics": [[0, "cmdoption-runoak-ancestors-statistics"], [0, "cmdoption-runoak-diff-statistics"]], "--no-unmelt": [[0, "cmdoption-runoak-generate-logical-definitions-unmelt"], [0, "cmdoption-runoak-logical-definitions-unmelt"]], "--no-use-associations": [[0, "cmdoption-runoak-information-content-use-associations"]], "--no-used-only": [[0, "cmdoption-runoak-prefixes-used-only"]], "--no-view": [[0, "cmdoption-runoak-viz-view"]], "--no-viz": [[0, "cmdoption-runoak-paths-viz"]], "--object-group": [[0, "cmdoption-runoak-rollup-object-group"]], "--obo-model": [[0, "cmdoption-runoak-aliases-obo-model"]], "--old-date": [[0, "cmdoption-runoak-diff-associations-old-date"]], "--ontology-only": [[0, "cmdoption-runoak-enrichment-ontology-only"]], "--other-associations": [[0, "cmdoption-runoak-diff-associations-X"]], "--other-input": [[0, "cmdoption-runoak-diff-via-mappings-X"]], "--other-input-type": [[0, "cmdoption-runoak-diff-via-mappings-other-input-type"]], "--other-languages": [[0, "cmdoption-runoak-other-languages"]], "--other-ontology": [[0, "cmdoption-runoak-diff-X"], [0, "cmdoption-runoak-diff-terms-other-ontology"]], "--output": [[0, "cmdoption-runoak-aliases-o"], [0, "cmdoption-runoak-ancestors-o"], [0, "cmdoption-runoak-annotate-o"], [0, "cmdoption-runoak-apply-o"], [0, "cmdoption-runoak-apply-obsolete-o"], [0, "cmdoption-runoak-apply-taxon-constraints-o"], [0, "cmdoption-runoak-associations-0"], [0, "cmdoption-runoak-associations-counts-0"], [0, "cmdoption-runoak-associations-counts-o"], [0, "cmdoption-runoak-associations-matrix-0"], [0, "cmdoption-runoak-associations-matrix-o"], [0, "cmdoption-runoak-associations-o"], [0, "cmdoption-runoak-axioms-o"], [0, "cmdoption-runoak-definitions-o"], [0, "cmdoption-runoak-descendants-o"], [0, "cmdoption-runoak-diff-associations-0"], [0, "cmdoption-runoak-diff-associations-o"], [0, "cmdoption-runoak-diff-o"], [0, "cmdoption-runoak-diff-terms-o"], [0, "cmdoption-runoak-diff-via-mappings-o"], [0, "cmdoption-runoak-disjoints-o"], [0, "cmdoption-runoak-dump-o"], [0, "cmdoption-runoak-enrichment-0"], [0, "cmdoption-runoak-enrichment-o"], [0, "cmdoption-runoak-expand-subsets-o"], [0, "cmdoption-runoak-extract-o"], [0, "cmdoption-runoak-fill-table-o"], [0, "cmdoption-runoak-generate-definitions-o"], [0, "cmdoption-runoak-generate-disjoints-o"], [0, "cmdoption-runoak-generate-logical-definitions-o"], [0, "cmdoption-runoak-generate-synonyms-o"], [0, "cmdoption-runoak-info-o"], [0, "cmdoption-runoak-information-content-o"], [0, "cmdoption-runoak-labels-o"], [0, "cmdoption-runoak-leafs-o"], [0, "cmdoption-runoak-lexmatch-o"], [0, "cmdoption-runoak-lint-o"], [0, "cmdoption-runoak-logical-definitions-o"], [0, "cmdoption-runoak-mappings-o"], [0, "cmdoption-runoak-migrate-curies-o"], [0, "cmdoption-runoak-normalize-o"], [0, "cmdoption-runoak-obsoletes-o"], [0, "cmdoption-runoak-ontologies-o"], [0, "cmdoption-runoak-ontology-metadata-o"], [0, "cmdoption-runoak-ontology-versions-o"], [0, "cmdoption-runoak-paths-o"], [0, "cmdoption-runoak-prefixes-o"], [0, "cmdoption-runoak-query-o"], [0, "cmdoption-runoak-relationships-o"], [0, "cmdoption-runoak-rollup-o"], [0, "cmdoption-runoak-roots-o"], [0, "cmdoption-runoak-search-o"], [0, "cmdoption-runoak-siblings-o"], [0, "cmdoption-runoak-similarity-o"], [0, "cmdoption-runoak-similarity-pair-o"], [0, "cmdoption-runoak-singletons-o"], [0, "cmdoption-runoak-statistics-o"], [0, "cmdoption-runoak-subsets-o"], [0, "cmdoption-runoak-synonymize-o"], [0, "cmdoption-runoak-taxon-constraints-o"], [0, "cmdoption-runoak-term-categories-o"], [0, "cmdoption-runoak-term-metadata-o"], [0, "cmdoption-runoak-term-subsets-o"], [0, "cmdoption-runoak-terms-o"], [0, "cmdoption-runoak-termset-similarity-o"], [0, "cmdoption-runoak-transform-o"], [0, "cmdoption-runoak-tree-o"], [0, "cmdoption-runoak-validate-definitions-o"], [0, "cmdoption-runoak-validate-mappings-o"], [0, "cmdoption-runoak-validate-multiple-o"], [0, "cmdoption-runoak-validate-o"], [0, "cmdoption-runoak-viz-o"]], "--output-type": [[0, "cmdoption-runoak-aliases-O"], [0, "cmdoption-runoak-ancestors-O"], [0, "cmdoption-runoak-annotate-O"], [0, "cmdoption-runoak-apply-O"], [0, "cmdoption-runoak-apply-obsolete-O"], [0, "cmdoption-runoak-associations-O"], [0, "cmdoption-runoak-associations-counts-O"], [0, "cmdoption-runoak-associations-matrix-O"], [0, "cmdoption-runoak-axioms-O"], [0, "cmdoption-runoak-definitions-O"], [0, "cmdoption-runoak-descendants-O"], [0, "cmdoption-runoak-diff-O"], [0, "cmdoption-runoak-diff-associations-O"], [0, "cmdoption-runoak-diff-via-mappings-O"], [0, "cmdoption-runoak-disjoints-O"], [0, "cmdoption-runoak-dump-O"], [0, "cmdoption-runoak-enrichment-O"], [0, "cmdoption-runoak-extract-O"], [0, "cmdoption-runoak-generate-definitions-O"], [0, "cmdoption-runoak-generate-disjoints-O"], [0, "cmdoption-runoak-generate-logical-definitions-O"], [0, "cmdoption-runoak-generate-synonyms-O"], [0, "cmdoption-runoak-info-O"], [0, "cmdoption-runoak-information-content-O"], [0, "cmdoption-runoak-labels-O"], [0, "cmdoption-runoak-lint-O"], [0, "cmdoption-runoak-logical-definitions-O"], [0, "cmdoption-runoak-mappings-O"], [0, "cmdoption-runoak-migrate-curies-O"], [0, "cmdoption-runoak-normalize-O"], [0, "cmdoption-runoak-obsoletes-O"], [0, "cmdoption-runoak-ontology-metadata-O"], [0, "cmdoption-runoak-paths-O"], [0, "cmdoption-runoak-prefixes-O"], [0, "cmdoption-runoak-query-O"], [0, "cmdoption-runoak-relationships-O"], [0, "cmdoption-runoak-rollup-O"], [0, "cmdoption-runoak-roots-O"], [0, "cmdoption-runoak-search-O"], [0, "cmdoption-runoak-siblings-O"], [0, "cmdoption-runoak-similarity-O"], [0, "cmdoption-runoak-similarity-pair-O"], [0, "cmdoption-runoak-statistics-O"], [0, "cmdoption-runoak-taxon-constraints-O"], [0, "cmdoption-runoak-term-categories-O"], [0, "cmdoption-runoak-term-metadata-O"], [0, "cmdoption-runoak-term-subsets-O"], [0, "cmdoption-runoak-termset-similarity-O"], [0, "cmdoption-runoak-transform-O"], [0, "cmdoption-runoak-tree-O"], [0, "cmdoption-runoak-validate-O"], [0, "cmdoption-runoak-validate-definitions-O"], [0, "cmdoption-runoak-validate-mappings-O"], [0, "cmdoption-runoak-viz-O"]], "--overwrite": [[0, "cmdoption-runoak-apply-overwrite"]], "--owl-type": [[0, "cmdoption-runoak-terms-owl-type"]], "--parse": [[0, "cmdoption-runoak-generate-logical-definitions-parse"]], "--patch": [[0, "cmdoption-runoak-generate-definitions-patch"], [0, "cmdoption-runoak-generate-synonyms-patch"], [0, "cmdoption-runoak-synonymize-patch"]], "--patch-format": [[0, "cmdoption-runoak-generate-definitions-patch-format"], [0, "cmdoption-runoak-generate-synonyms-patch-format"]], "--patterns-file": [[0, "cmdoption-runoak-generate-logical-definitions-P"]], "--pivot-languages": [[0, "cmdoption-runoak-labels-pivot-languages"]], "--predicate-weights": [[0, "cmdoption-runoak-paths-predicate-weights"]], "--predicates": [[0, "cmdoption-runoak-ancestors-p"], [0, "cmdoption-runoak-apply-taxon-constraints-p"], [0, "cmdoption-runoak-associations-counts-p"], [0, "cmdoption-runoak-associations-matrix-p"], [0, "cmdoption-runoak-associations-p"], [0, "cmdoption-runoak-descendants-p"], [0, "cmdoption-runoak-diff-associations-p"], [0, "cmdoption-runoak-diff-via-mappings-p"], [0, "cmdoption-runoak-disjoints-p"], [0, "cmdoption-runoak-enrichment-p"], [0, "cmdoption-runoak-expand-subsets-p"], [0, "cmdoption-runoak-extract-p"], [0, "cmdoption-runoak-generate-disjoints-p"], [0, "cmdoption-runoak-information-content-p"], [0, "cmdoption-runoak-leafs-p"], [0, "cmdoption-runoak-logical-definitions-p"], [0, "cmdoption-runoak-paths-p"], [0, "cmdoption-runoak-relationships-p"], [0, "cmdoption-runoak-rollup-p"], [0, "cmdoption-runoak-roots-p"], [0, "cmdoption-runoak-siblings-p"], [0, "cmdoption-runoak-similarity-p"], [0, "cmdoption-runoak-similarity-pair-p"], [0, "cmdoption-runoak-singletons-p"], [0, "cmdoption-runoak-taxon-constraints-p"], [0, "cmdoption-runoak-term-metadata-p"], [0, "cmdoption-runoak-termset-similarity-p"], [0, "cmdoption-runoak-tree-p"], [0, "cmdoption-runoak-viz-p"]], "--preferred-language": [[0, "cmdoption-runoak-l"]], "--prefix": [[0, "cmdoption-runoak-prefix"]], "--prefixes": [[0, "cmdoption-runoak-query-P"]], "--profile": [[0, "cmdoption-runoak-profile"]], "--query": [[0, "cmdoption-runoak-query-q"]], "--quiet": [[0, "cmdoption-runoak-q"]], "--recreate": [[0, "cmdoption-runoak-lexmatch-recreate"]], "--references": [[0, "cmdoption-runoak-axioms-references"]], "--relation": [[0, "cmdoption-runoak-fill-table-relation"]], "--relation-file": [[0, "cmdoption-runoak-fill-table-relation-file"]], "--replace": [[0, "cmdoption-runoak-migrate-curies-replace"]], "--report-format": [[0, "cmdoption-runoak-lint-report-format"]], "--requests-cache-db": [[0, "cmdoption-runoak-requests-cache-db"]], "--root": [[0, "cmdoption-runoak-tree-root"]], "--rule": [[0, "cmdoption-runoak-validate-R"]], "--rules-file": [[0, "cmdoption-runoak-annotate-R"], [0, "cmdoption-runoak-generate-synonyms-R"], [0, "cmdoption-runoak-lexmatch-R"], [0, "cmdoption-runoak-synonymize-R"]], "--sample-file": [[0, "cmdoption-runoak-enrichment-U"]], "--save-as": [[0, "cmdoption-runoak-save-as"]], "--schema": [[0, "cmdoption-runoak-fill-table-schema"], [0, "cmdoption-runoak-validate-multiple-s"]], "--set-value": [[0, "cmdoption-runoak-associations-S"], [0, "cmdoption-runoak-definitions-S"], [0, "cmdoption-runoak-labels-S"], [0, "cmdoption-runoak-logical-definitions-S"], [0, "cmdoption-runoak-relationships-S"]], "--set1-file": [[0, "cmdoption-runoak-similarity-set1-file"]], "--set2-file": [[0, "cmdoption-runoak-similarity-set2-file"]], "--show-extract": [[0, "cmdoption-runoak-generate-logical-definitions-show-extract"]], "--show-migration-relationships": [[0, "cmdoption-runoak-obsoletes-show-migration-relationships"]], "--simple": [[0, "cmdoption-runoak-diff-simple"]], "--skip": [[0, "cmdoption-runoak-tree-skip"]], "--skip-ontology-rules": [[0, "cmdoption-runoak-validate-skip-ontology-rules"]], "--skip-structural-validation": [[0, "cmdoption-runoak-validate-skip-structural-validation"]], "--skip-text-annotation": [[0, "cmdoption-runoak-validate-definitions-skip-text-annotation"]], "--source": [[0, "cmdoption-runoak-diff-via-mappings-S"]], "--stacktrace": [[0, "cmdoption-runoak-stacktrace"]], "--statistics": [[0, "cmdoption-runoak-ancestors-statistics"], [0, "cmdoption-runoak-diff-statistics"]], "--style-hints": [[0, "cmdoption-runoak-generate-definitions-style-hints"]], "--stylemap": [[0, "cmdoption-runoak-paths-S"], [0, "cmdoption-runoak-tree-S"], [0, "cmdoption-runoak-viz-S"]], "--target": [[0, "cmdoption-runoak-paths-target"]], "--terms-role": [[0, "cmdoption-runoak-associations-Q"], [0, "cmdoption-runoak-associations-counts-Q"], [0, "cmdoption-runoak-associations-matrix-Q"]], "--text-file": [[0, "cmdoption-runoak-annotate-text-file"]], "--transform": [[0, "cmdoption-runoak-transform-t"]], "--unmelt": [[0, "cmdoption-runoak-generate-logical-definitions-unmelt"], [0, "cmdoption-runoak-logical-definitions-unmelt"]], "--use-associations": [[0, "cmdoption-runoak-information-content-use-associations"]], "--used-only": [[0, "cmdoption-runoak-prefixes-used-only"]], "--verbose": [[0, "cmdoption-runoak-v"]], "--view": [[0, "cmdoption-runoak-viz-view"]], "--viz": [[0, "cmdoption-runoak-paths-viz"]], "--wrap-adapter": [[0, "cmdoption-runoak-W"]], "-a": [[0, "cmdoption-runoak-annotate-A"], [0, "cmdoption-runoak-roots-A"], [0, "cmdoption-runoak-taxon-constraints-A"], [0, "cmdoption-runoak-a"]], "-b": [[0, "cmdoption-runoak-enrichment-B"]], "-c": [[0, "cmdoption-runoak-annotate-C"], [0, "cmdoption-runoak-paths-C"], [0, "cmdoption-runoak-tree-C"], [0, "cmdoption-runoak-validate-mappings-C"], [0, "cmdoption-runoak-viz-C"], [0, "cmdoption-runoak-dump-c"], [0, "cmdoption-runoak-transform-c"]], "-d": [[0, "cmdoption-runoak-definitions-D"], [0, "cmdoption-runoak-descendants-D"], [0, "cmdoption-runoak-info-D"], [0, "cmdoption-runoak-labels-D"], [0, "cmdoption-runoak-tree-D"]], "-e": [[0, "cmdoption-runoak-apply-taxon-constraints-E"], [0, "cmdoption-runoak-set-apikey-e"]], "-f": [[0, "cmdoption-runoak-associations-counts-F"]], "-g": [[0, "cmdoption-runoak-G"], [0, "cmdoption-runoak-diff-associations-g"], [0, "cmdoption-runoak-g"]], "-i": [[0, "cmdoption-runoak-I"], [0, "cmdoption-runoak-i"]], "-l": [[0, "cmdoption-runoak-annotate-L"], [0, "cmdoption-runoak-associations-counts-L"], [0, "cmdoption-runoak-lexmatch-L"], [0, "cmdoption-runoak-query-L"], [0, "cmdoption-runoak-l"]], "-m": [[0, "cmdoption-runoak-ancestors-M"], [0, "cmdoption-runoak-apply-taxon-constraints-M"], [0, "cmdoption-runoak-descendants-M"], [0, "cmdoption-runoak-generate-disjoints-M"], [0, "cmdoption-runoak-mappings-M"], [0, "cmdoption-runoak-normalize-M"], [0, "cmdoption-runoak-taxon-constraints-M"], [0, "cmdoption-runoak-annotate-m"]], "-o": [[0, "cmdoption-runoak-aliases-O"], [0, "cmdoption-runoak-ancestors-O"], [0, "cmdoption-runoak-annotate-O"], [0, "cmdoption-runoak-apply-O"], [0, "cmdoption-runoak-apply-obsolete-O"], [0, "cmdoption-runoak-associations-O"], [0, "cmdoption-runoak-associations-counts-O"], [0, "cmdoption-runoak-associations-matrix-O"], [0, "cmdoption-runoak-axioms-O"], [0, "cmdoption-runoak-definitions-O"], [0, "cmdoption-runoak-descendants-O"], [0, "cmdoption-runoak-diff-O"], [0, "cmdoption-runoak-diff-associations-O"], [0, "cmdoption-runoak-diff-via-mappings-O"], [0, "cmdoption-runoak-disjoints-O"], [0, "cmdoption-runoak-dump-O"], [0, "cmdoption-runoak-enrichment-O"], [0, "cmdoption-runoak-extract-O"], [0, "cmdoption-runoak-generate-definitions-O"], [0, "cmdoption-runoak-generate-disjoints-O"], [0, "cmdoption-runoak-generate-logical-definitions-O"], [0, "cmdoption-runoak-generate-synonyms-O"], [0, "cmdoption-runoak-info-O"], [0, "cmdoption-runoak-information-content-O"], [0, "cmdoption-runoak-labels-O"], [0, "cmdoption-runoak-lint-O"], [0, "cmdoption-runoak-logical-definitions-O"], [0, "cmdoption-runoak-mappings-O"], [0, "cmdoption-runoak-migrate-curies-O"], [0, "cmdoption-runoak-normalize-O"], [0, "cmdoption-runoak-obsoletes-O"], [0, "cmdoption-runoak-ontology-metadata-O"], [0, "cmdoption-runoak-paths-O"], [0, "cmdoption-runoak-prefixes-O"], [0, "cmdoption-runoak-query-O"], [0, "cmdoption-runoak-relationships-O"], [0, "cmdoption-runoak-rollup-O"], [0, "cmdoption-runoak-roots-O"], [0, "cmdoption-runoak-search-O"], [0, "cmdoption-runoak-siblings-O"], [0, "cmdoption-runoak-similarity-O"], [0, "cmdoption-runoak-similarity-pair-O"], [0, "cmdoption-runoak-statistics-O"], [0, "cmdoption-runoak-taxon-constraints-O"], [0, "cmdoption-runoak-term-categories-O"], [0, "cmdoption-runoak-term-metadata-O"], [0, "cmdoption-runoak-term-subsets-O"], [0, "cmdoption-runoak-termset-similarity-O"], [0, "cmdoption-runoak-transform-O"], [0, "cmdoption-runoak-tree-O"], [0, "cmdoption-runoak-validate-O"], [0, "cmdoption-runoak-validate-definitions-O"], [0, "cmdoption-runoak-validate-mappings-O"], [0, "cmdoption-runoak-viz-O"], [0, "cmdoption-runoak-aliases-o"], [0, "cmdoption-runoak-ancestors-o"], [0, "cmdoption-runoak-annotate-o"], [0, "cmdoption-runoak-apply-o"], [0, "cmdoption-runoak-apply-obsolete-o"], [0, "cmdoption-runoak-apply-taxon-constraints-o"], [0, "cmdoption-runoak-associations-0"], [0, "cmdoption-runoak-associations-counts-0"], [0, "cmdoption-runoak-associations-counts-o"], [0, "cmdoption-runoak-associations-matrix-0"], [0, "cmdoption-runoak-associations-matrix-o"], [0, "cmdoption-runoak-associations-o"], [0, "cmdoption-runoak-axioms-o"], [0, "cmdoption-runoak-definitions-o"], [0, "cmdoption-runoak-descendants-o"], [0, "cmdoption-runoak-diff-associations-0"], [0, "cmdoption-runoak-diff-associations-o"], [0, "cmdoption-runoak-diff-o"], [0, "cmdoption-runoak-diff-terms-o"], [0, "cmdoption-runoak-diff-via-mappings-o"], [0, "cmdoption-runoak-disjoints-o"], [0, "cmdoption-runoak-dump-o"], [0, "cmdoption-runoak-enrichment-0"], [0, "cmdoption-runoak-enrichment-o"], [0, "cmdoption-runoak-expand-subsets-o"], [0, "cmdoption-runoak-extract-o"], [0, "cmdoption-runoak-fill-table-o"], [0, "cmdoption-runoak-generate-definitions-o"], [0, "cmdoption-runoak-generate-disjoints-o"], [0, "cmdoption-runoak-generate-logical-definitions-o"], [0, "cmdoption-runoak-generate-synonyms-o"], [0, "cmdoption-runoak-info-o"], [0, "cmdoption-runoak-information-content-o"], [0, "cmdoption-runoak-labels-o"], [0, "cmdoption-runoak-leafs-o"], [0, "cmdoption-runoak-lexmatch-o"], [0, "cmdoption-runoak-lint-o"], [0, "cmdoption-runoak-logical-definitions-o"], [0, "cmdoption-runoak-mappings-o"], [0, "cmdoption-runoak-migrate-curies-o"], [0, "cmdoption-runoak-normalize-o"], [0, "cmdoption-runoak-obsoletes-o"], [0, "cmdoption-runoak-ontologies-o"], [0, "cmdoption-runoak-ontology-metadata-o"], [0, "cmdoption-runoak-ontology-versions-o"], [0, "cmdoption-runoak-paths-o"], [0, "cmdoption-runoak-prefixes-o"], [0, "cmdoption-runoak-query-o"], [0, "cmdoption-runoak-relationships-o"], [0, "cmdoption-runoak-rollup-o"], [0, "cmdoption-runoak-roots-o"], [0, "cmdoption-runoak-search-o"], [0, "cmdoption-runoak-siblings-o"], [0, "cmdoption-runoak-similarity-o"], [0, "cmdoption-runoak-similarity-pair-o"], [0, "cmdoption-runoak-singletons-o"], [0, "cmdoption-runoak-statistics-o"], [0, "cmdoption-runoak-subsets-o"], [0, "cmdoption-runoak-synonymize-o"], [0, "cmdoption-runoak-taxon-constraints-o"], [0, "cmdoption-runoak-term-categories-o"], [0, "cmdoption-runoak-term-metadata-o"], [0, "cmdoption-runoak-term-subsets-o"], [0, "cmdoption-runoak-terms-o"], [0, "cmdoption-runoak-termset-similarity-o"], [0, "cmdoption-runoak-transform-o"], [0, "cmdoption-runoak-tree-o"], [0, "cmdoption-runoak-validate-definitions-o"], [0, "cmdoption-runoak-validate-mappings-o"], [0, "cmdoption-runoak-validate-multiple-o"], [0, "cmdoption-runoak-validate-o"], [0, "cmdoption-runoak-viz-o"]], "-p": [[0, "cmdoption-runoak-generate-logical-definitions-P"], [0, "cmdoption-runoak-query-P"], [0, "cmdoption-runoak-roots-P"], [0, "cmdoption-runoak-statistics-P"], [0, "cmdoption-runoak-ancestors-p"], [0, "cmdoption-runoak-apply-taxon-constraints-p"], [0, "cmdoption-runoak-associations-counts-p"], [0, "cmdoption-runoak-associations-matrix-p"], [0, "cmdoption-runoak-associations-p"], [0, "cmdoption-runoak-descendants-p"], [0, "cmdoption-runoak-diff-associations-p"], [0, "cmdoption-runoak-diff-via-mappings-p"], [0, "cmdoption-runoak-disjoints-p"], [0, "cmdoption-runoak-enrichment-p"], [0, "cmdoption-runoak-expand-subsets-p"], [0, "cmdoption-runoak-extract-p"], [0, "cmdoption-runoak-generate-disjoints-p"], [0, "cmdoption-runoak-information-content-p"], [0, "cmdoption-runoak-leafs-p"], [0, "cmdoption-runoak-logical-definitions-p"], [0, "cmdoption-runoak-paths-p"], [0, "cmdoption-runoak-relationships-p"], [0, "cmdoption-runoak-rollup-p"], [0, "cmdoption-runoak-roots-p"], [0, "cmdoption-runoak-siblings-p"], [0, "cmdoption-runoak-similarity-p"], [0, "cmdoption-runoak-similarity-pair-p"], [0, "cmdoption-runoak-singletons-p"], [0, "cmdoption-runoak-taxon-constraints-p"], [0, "cmdoption-runoak-term-metadata-p"], [0, "cmdoption-runoak-termset-similarity-p"], [0, "cmdoption-runoak-tree-p"], [0, "cmdoption-runoak-viz-p"]], "-q": [[0, "cmdoption-runoak-associations-Q"], [0, "cmdoption-runoak-associations-counts-Q"], [0, "cmdoption-runoak-associations-matrix-Q"], [0, "cmdoption-runoak-q"], [0, "cmdoption-runoak-query-q"]], "-r": [[0, "cmdoption-runoak-annotate-R"], [0, "cmdoption-runoak-generate-synonyms-R"], [0, "cmdoption-runoak-lexmatch-R"], [0, "cmdoption-runoak-synonymize-R"], [0, "cmdoption-runoak-validate-R"]], "-s": [[0, "cmdoption-runoak-associations-S"], [0, "cmdoption-runoak-definitions-S"], [0, "cmdoption-runoak-diff-via-mappings-S"], [0, "cmdoption-runoak-labels-S"], [0, "cmdoption-runoak-logical-definitions-S"], [0, "cmdoption-runoak-paths-S"], [0, "cmdoption-runoak-relationships-S"], [0, "cmdoption-runoak-tree-S"], [0, "cmdoption-runoak-viz-S"], [0, "cmdoption-runoak-validate-multiple-s"]], "-u": [[0, "cmdoption-runoak-enrichment-U"]], "-w": [[0, "cmdoption-runoak-W"], [0, "cmdoption-runoak-annotate-W"]], "-x": [[0, "cmdoption-runoak-diff-X"], [0, "cmdoption-runoak-diff-associations-X"], [0, "cmdoption-runoak-diff-via-mappings-X"], [0, "cmdoption-runoak-statistics-X"], [0, "cmdoption-runoak-annotate-x"]], "-t": [[0, "cmdoption-runoak-transform-t"]], "-v": [[0, "cmdoption-runoak-v"]], "branches": [[0, "cmdoption-runoak-statistics-arg-BRANCHES"]], "commands": [[0, "cmdoption-runoak-apply-arg-COMMANDS"]], "constraints": [[0, "cmdoption-runoak-apply-taxon-constraints-arg-CONSTRAINTS"]], "curie_pairs": [[0, "cmdoption-runoak-migrate-curies-arg-CURIE_PAIRS"]], "dbs": [[0, "cmdoption-runoak-validate-multiple-arg-DBS"]], "keyval": [[0, "cmdoption-runoak-set-apikey-arg-KEYVAL"]], "ontologies": [[0, "cmdoption-runoak-ontology-metadata-arg-ONTOLOGIES"], [0, "cmdoption-runoak-ontology-versions-arg-ONTOLOGIES"]], "subsets": [[0, "cmdoption-runoak-expand-subsets-arg-SUBSETS"]], "table_file": [[0, "cmdoption-runoak-fill-table-arg-TABLE_FILE"]], "terms": [[0, "cmdoption-runoak-aliases-arg-TERMS"], [0, "cmdoption-runoak-ancestors-arg-TERMS"], [0, "cmdoption-runoak-apply-obsolete-arg-TERMS"], [0, "cmdoption-runoak-associations-arg-TERMS"], [0, "cmdoption-runoak-associations-counts-arg-TERMS"], [0, "cmdoption-runoak-associations-matrix-arg-TERMS"], [0, "cmdoption-runoak-axioms-arg-TERMS"], [0, "cmdoption-runoak-definitions-arg-TERMS"], [0, "cmdoption-runoak-descendants-arg-TERMS"], [0, "cmdoption-runoak-diff-terms-arg-TERMS"], [0, "cmdoption-runoak-diff-via-mappings-arg-TERMS"], [0, "cmdoption-runoak-disjoints-arg-TERMS"], [0, "cmdoption-runoak-dump-arg-TERMS"], [0, "cmdoption-runoak-enrichment-arg-TERMS"], [0, "cmdoption-runoak-extract-arg-TERMS"], [0, "cmdoption-runoak-generate-definitions-arg-TERMS"], [0, "cmdoption-runoak-generate-disjoints-arg-TERMS"], [0, "cmdoption-runoak-generate-logical-definitions-arg-TERMS"], [0, "cmdoption-runoak-generate-synonyms-arg-TERMS"], [0, "cmdoption-runoak-info-arg-TERMS"], [0, "cmdoption-runoak-information-content-arg-TERMS"], [0, "cmdoption-runoak-labels-arg-TERMS"], [0, "cmdoption-runoak-lexmatch-arg-TERMS"], [0, "cmdoption-runoak-logical-definitions-arg-TERMS"], [0, "cmdoption-runoak-mappings-arg-TERMS"], [0, "cmdoption-runoak-normalize-arg-TERMS"], [0, "cmdoption-runoak-obsoletes-arg-TERMS"], [0, "cmdoption-runoak-paths-arg-TERMS"], [0, "cmdoption-runoak-prefixes-arg-TERMS"], [0, "cmdoption-runoak-relationships-arg-TERMS"], [0, "cmdoption-runoak-rollup-arg-TERMS"], [0, "cmdoption-runoak-search-arg-TERMS"], [0, "cmdoption-runoak-siblings-arg-TERMS"], [0, "cmdoption-runoak-similarity-arg-TERMS"], [0, "cmdoption-runoak-similarity-pair-arg-TERMS"], [0, "cmdoption-runoak-synonymize-arg-TERMS"], [0, "cmdoption-runoak-taxon-constraints-arg-TERMS"], [0, "cmdoption-runoak-term-categories-arg-TERMS"], [0, "cmdoption-runoak-term-metadata-arg-TERMS"], [0, "cmdoption-runoak-term-subsets-arg-TERMS"], [0, "cmdoption-runoak-termset-similarity-arg-TERMS"], [0, "cmdoption-runoak-transform-arg-TERMS"], [0, "cmdoption-runoak-tree-arg-TERMS"], [0, "cmdoption-runoak-validate-arg-TERMS"], [0, "cmdoption-runoak-validate-definitions-arg-TERMS"], [0, "cmdoption-runoak-validate-mappings-arg-TERMS"], [0, "cmdoption-runoak-viz-arg-TERMS"]], "words": [[0, "cmdoption-runoak-annotate-arg-WORDS"]], "runoak command line option": [[0, "cmdoption-runoak-G"], [0, "cmdoption-runoak-I"], [0, "cmdoption-runoak-W"], [0, "cmdoption-runoak-a"], [0, "cmdoption-runoak-autosave"], [0, "cmdoption-runoak-g"], [0, "cmdoption-runoak-i"], [0, "cmdoption-runoak-import-depth"], [0, "cmdoption-runoak-l"], [0, "cmdoption-runoak-merge"], [0, "cmdoption-runoak-metamodel-mappings"], [0, "cmdoption-runoak-named-prefix-map"], [0, "cmdoption-runoak-other-languages"], [0, "cmdoption-runoak-prefix"], [0, "cmdoption-runoak-profile"], [0, "cmdoption-runoak-q"], [0, "cmdoption-runoak-requests-cache-db"], [0, "cmdoption-runoak-save-as"], [0, "cmdoption-runoak-stacktrace"], [0, "cmdoption-runoak-v"]], "runoak-aliases command line option": [[0, "cmdoption-runoak-aliases-O"], [0, "cmdoption-runoak-aliases-arg-TERMS"], [0, "cmdoption-runoak-aliases-o"], [0, "cmdoption-runoak-aliases-obo-model"]], "runoak-ancestors command line option": [[0, "cmdoption-runoak-ancestors-M"], [0, "cmdoption-runoak-ancestors-O"], [0, "cmdoption-runoak-ancestors-arg-TERMS"], [0, "cmdoption-runoak-ancestors-o"], [0, "cmdoption-runoak-ancestors-p"], [0, "cmdoption-runoak-ancestors-statistics"]], "runoak-annotate command line option": [[0, "cmdoption-runoak-annotate-A"], [0, "cmdoption-runoak-annotate-C"], [0, "cmdoption-runoak-annotate-L"], [0, "cmdoption-runoak-annotate-O"], [0, "cmdoption-runoak-annotate-R"], [0, "cmdoption-runoak-annotate-W"], [0, "cmdoption-runoak-annotate-arg-WORDS"], [0, "cmdoption-runoak-annotate-include-aliases"], [0, "cmdoption-runoak-annotate-m"], [0, "cmdoption-runoak-annotate-o"], [0, "cmdoption-runoak-annotate-text-file"], [0, "cmdoption-runoak-annotate-x"]], "runoak-apply command line option": [[0, "cmdoption-runoak-apply-O"], [0, "cmdoption-runoak-apply-arg-COMMANDS"], [0, "cmdoption-runoak-apply-changes-format"], [0, "cmdoption-runoak-apply-changes-input"], [0, "cmdoption-runoak-apply-changes-output"], [0, "cmdoption-runoak-apply-contributor"], [0, "cmdoption-runoak-apply-dry-run"], [0, "cmdoption-runoak-apply-expand"], [0, "cmdoption-runoak-apply-ignore-invalid-changes"], [0, "cmdoption-runoak-apply-o"], [0, "cmdoption-runoak-apply-overwrite"]], "runoak-apply-obsolete command line option": [[0, "cmdoption-runoak-apply-obsolete-O"], [0, "cmdoption-runoak-apply-obsolete-arg-TERMS"], [0, "cmdoption-runoak-apply-obsolete-expand"], [0, "cmdoption-runoak-apply-obsolete-ignore-invalid-changes"], [0, "cmdoption-runoak-apply-obsolete-o"]], "runoak-apply-taxon-constraints command line option": [[0, "cmdoption-runoak-apply-taxon-constraints-E"], [0, "cmdoption-runoak-apply-taxon-constraints-M"], [0, "cmdoption-runoak-apply-taxon-constraints-arg-CONSTRAINTS"], [0, "cmdoption-runoak-apply-taxon-constraints-o"], [0, "cmdoption-runoak-apply-taxon-constraints-p"]], "runoak-associations command line option": [[0, "cmdoption-runoak-associations-0"], [0, "cmdoption-runoak-associations-O"], [0, "cmdoption-runoak-associations-Q"], [0, "cmdoption-runoak-associations-S"], [0, "cmdoption-runoak-associations-add-closure-fields"], [0, "cmdoption-runoak-associations-arg-TERMS"], [0, "cmdoption-runoak-associations-association-predicates"], [0, "cmdoption-runoak-associations-autolabel"], [0, "cmdoption-runoak-associations-if-absent"], [0, "cmdoption-runoak-associations-o"], [0, "cmdoption-runoak-associations-p"]], "runoak-associations-counts command line option": [[0, "cmdoption-runoak-associations-counts-0"], [0, "cmdoption-runoak-associations-counts-F"], [0, "cmdoption-runoak-associations-counts-L"], [0, "cmdoption-runoak-associations-counts-O"], [0, "cmdoption-runoak-associations-counts-Q"], [0, "cmdoption-runoak-associations-counts-add-closure-fields"], [0, "cmdoption-runoak-associations-counts-arg-TERMS"], [0, "cmdoption-runoak-associations-counts-association-predicates"], [0, "cmdoption-runoak-associations-counts-autolabel"], [0, "cmdoption-runoak-associations-counts-group-by"], [0, "cmdoption-runoak-associations-counts-min-facet-count"], [0, "cmdoption-runoak-associations-counts-o"], [0, "cmdoption-runoak-associations-counts-p"]], "runoak-associations-matrix command line option": [[0, "cmdoption-runoak-associations-matrix-0"], [0, "cmdoption-runoak-associations-matrix-O"], [0, "cmdoption-runoak-associations-matrix-Q"], [0, "cmdoption-runoak-associations-matrix-arg-TERMS"], [0, "cmdoption-runoak-associations-matrix-association-predicates"], [0, "cmdoption-runoak-associations-matrix-autolabel"], [0, "cmdoption-runoak-associations-matrix-include-entities"], [0, "cmdoption-runoak-associations-matrix-o"], [0, "cmdoption-runoak-associations-matrix-p"]], "runoak-axioms command line option": [[0, "cmdoption-runoak-axioms-O"], [0, "cmdoption-runoak-axioms-about"], [0, "cmdoption-runoak-axioms-arg-TERMS"], [0, "cmdoption-runoak-axioms-axiom-type"], [0, "cmdoption-runoak-axioms-o"], [0, "cmdoption-runoak-axioms-references"]], "runoak-cache-clear command line option": [[0, "cmdoption-runoak-cache-clear-days-old"]], "runoak-definitions command line option": [[0, "cmdoption-runoak-definitions-D"], [0, "cmdoption-runoak-definitions-O"], [0, "cmdoption-runoak-definitions-S"], [0, "cmdoption-runoak-definitions-additional-metadata"], [0, "cmdoption-runoak-definitions-arg-TERMS"], [0, "cmdoption-runoak-definitions-autolabel"], [0, "cmdoption-runoak-definitions-if-absent"], [0, "cmdoption-runoak-definitions-o"]], "runoak-descendants command line option": [[0, "cmdoption-runoak-descendants-D"], [0, "cmdoption-runoak-descendants-M"], [0, "cmdoption-runoak-descendants-O"], [0, "cmdoption-runoak-descendants-arg-TERMS"], [0, "cmdoption-runoak-descendants-o"], [0, "cmdoption-runoak-descendants-p"]], "runoak-diff command line option": [[0, "cmdoption-runoak-diff-O"], [0, "cmdoption-runoak-diff-X"], [0, "cmdoption-runoak-diff-change-type"], [0, "cmdoption-runoak-diff-group-by-defined-by"], [0, "cmdoption-runoak-diff-group-by-obo-namespace"], [0, "cmdoption-runoak-diff-group-by-prefix"], [0, "cmdoption-runoak-diff-group-by-property"], [0, "cmdoption-runoak-diff-o"], [0, "cmdoption-runoak-diff-simple"], [0, "cmdoption-runoak-diff-statistics"]], "runoak-diff-associations command line option": [[0, "cmdoption-runoak-diff-associations-0"], [0, "cmdoption-runoak-diff-associations-O"], [0, "cmdoption-runoak-diff-associations-X"], [0, "cmdoption-runoak-diff-associations-autolabel"], [0, "cmdoption-runoak-diff-associations-g"], [0, "cmdoption-runoak-diff-associations-group-by"], [0, "cmdoption-runoak-diff-associations-new-date"], [0, "cmdoption-runoak-diff-associations-o"], [0, "cmdoption-runoak-diff-associations-old-date"], [0, "cmdoption-runoak-diff-associations-p"]], "runoak-diff-terms command line option": [[0, "cmdoption-runoak-diff-terms-arg-TERMS"], [0, "cmdoption-runoak-diff-terms-o"], [0, "cmdoption-runoak-diff-terms-other-ontology"]], "runoak-diff-via-mappings command line option": [[0, "cmdoption-runoak-diff-via-mappings-O"], [0, "cmdoption-runoak-diff-via-mappings-S"], [0, "cmdoption-runoak-diff-via-mappings-X"], [0, "cmdoption-runoak-diff-via-mappings-arg-TERMS"], [0, "cmdoption-runoak-diff-via-mappings-autolabel"], [0, "cmdoption-runoak-diff-via-mappings-bidirectional"], [0, "cmdoption-runoak-diff-via-mappings-filter-category-identical"], [0, "cmdoption-runoak-diff-via-mappings-include-identity-mappings"], [0, "cmdoption-runoak-diff-via-mappings-intra"], [0, "cmdoption-runoak-diff-via-mappings-mapping-input"], [0, "cmdoption-runoak-diff-via-mappings-o"], [0, "cmdoption-runoak-diff-via-mappings-other-input-type"], [0, "cmdoption-runoak-diff-via-mappings-p"]], "runoak-disjoints command line option": [[0, "cmdoption-runoak-disjoints-O"], [0, "cmdoption-runoak-disjoints-arg-TERMS"], [0, "cmdoption-runoak-disjoints-autolabel"], [0, "cmdoption-runoak-disjoints-named-classes-only"], [0, "cmdoption-runoak-disjoints-o"], [0, "cmdoption-runoak-disjoints-p"]], "runoak-dump command line option": [[0, "cmdoption-runoak-dump-O"], [0, "cmdoption-runoak-dump-arg-TERMS"], [0, "cmdoption-runoak-dump-c"], [0, "cmdoption-runoak-dump-enforce-canonical-ordering"], [0, "cmdoption-runoak-dump-o"]], "runoak-enrichment command line option": [[0, "cmdoption-runoak-enrichment-0"], [0, "cmdoption-runoak-enrichment-B"], [0, "cmdoption-runoak-enrichment-O"], [0, "cmdoption-runoak-enrichment-U"], [0, "cmdoption-runoak-enrichment-allow-labels"], [0, "cmdoption-runoak-enrichment-arg-TERMS"], [0, "cmdoption-runoak-enrichment-association-predicates"], [0, "cmdoption-runoak-enrichment-autolabel"], [0, "cmdoption-runoak-enrichment-cutoff"], [0, "cmdoption-runoak-enrichment-filter-redundant"], [0, "cmdoption-runoak-enrichment-o"], [0, "cmdoption-runoak-enrichment-ontology-only"], [0, "cmdoption-runoak-enrichment-p"]], "runoak-expand-subsets command line option": [[0, "cmdoption-runoak-expand-subsets-arg-SUBSETS"], [0, "cmdoption-runoak-expand-subsets-o"], [0, "cmdoption-runoak-expand-subsets-p"]], "runoak-extract command line option": [[0, "cmdoption-runoak-extract-O"], [0, "cmdoption-runoak-extract-arg-TERMS"], [0, "cmdoption-runoak-extract-dangling"], [0, "cmdoption-runoak-extract-include-metadata"], [0, "cmdoption-runoak-extract-o"], [0, "cmdoption-runoak-extract-p"]], "runoak-fill-table command line option": [[0, "cmdoption-runoak-fill-table-allow-missing"], [0, "cmdoption-runoak-fill-table-arg-TABLE_FILE"], [0, "cmdoption-runoak-fill-table-autolabel"], [0, "cmdoption-runoak-fill-table-comment"], [0, "cmdoption-runoak-fill-table-delimiter"], [0, "cmdoption-runoak-fill-table-missing-value-token"], [0, "cmdoption-runoak-fill-table-o"], [0, "cmdoption-runoak-fill-table-relation"], [0, "cmdoption-runoak-fill-table-relation-file"], [0, "cmdoption-runoak-fill-table-schema"]], "runoak-generate-definitions command line option": [[0, "cmdoption-runoak-generate-definitions-O"], [0, "cmdoption-runoak-generate-definitions-apply-patch"], [0, "cmdoption-runoak-generate-definitions-arg-TERMS"], [0, "cmdoption-runoak-generate-definitions-o"], [0, "cmdoption-runoak-generate-definitions-patch"], [0, "cmdoption-runoak-generate-definitions-patch-format"], [0, "cmdoption-runoak-generate-definitions-style-hints"]], "runoak-generate-disjoints command line option": [[0, "cmdoption-runoak-generate-disjoints-M"], [0, "cmdoption-runoak-generate-disjoints-O"], [0, "cmdoption-runoak-generate-disjoints-arg-TERMS"], [0, "cmdoption-runoak-generate-disjoints-autolabel"], [0, "cmdoption-runoak-generate-disjoints-exclude-existing"], [0, "cmdoption-runoak-generate-disjoints-o"], [0, "cmdoption-runoak-generate-disjoints-p"]], "runoak-generate-logical-definitions command line option": [[0, "cmdoption-runoak-generate-logical-definitions-O"], [0, "cmdoption-runoak-generate-logical-definitions-P"], [0, "cmdoption-runoak-generate-logical-definitions-analyze"], [0, "cmdoption-runoak-generate-logical-definitions-arg-TERMS"], [0, "cmdoption-runoak-generate-logical-definitions-autolabel"], [0, "cmdoption-runoak-generate-logical-definitions-fill"], [0, "cmdoption-runoak-generate-logical-definitions-o"], [0, "cmdoption-runoak-generate-logical-definitions-parse"], [0, "cmdoption-runoak-generate-logical-definitions-show-extract"], [0, "cmdoption-runoak-generate-logical-definitions-unmelt"]], "runoak-generate-synonyms command line option": [[0, "cmdoption-runoak-generate-synonyms-O"], [0, "cmdoption-runoak-generate-synonyms-R"], [0, "cmdoption-runoak-generate-synonyms-apply-patch"], [0, "cmdoption-runoak-generate-synonyms-arg-TERMS"], [0, "cmdoption-runoak-generate-synonyms-o"], [0, "cmdoption-runoak-generate-synonyms-patch"], [0, "cmdoption-runoak-generate-synonyms-patch-format"]], "runoak-info command line option": [[0, "cmdoption-runoak-info-D"], [0, "cmdoption-runoak-info-O"], [0, "cmdoption-runoak-info-arg-TERMS"], [0, "cmdoption-runoak-info-o"]], "runoak-information-content command line option": [[0, "cmdoption-runoak-information-content-O"], [0, "cmdoption-runoak-information-content-arg-TERMS"], [0, "cmdoption-runoak-information-content-o"], [0, "cmdoption-runoak-information-content-p"], [0, "cmdoption-runoak-information-content-use-associations"]], "runoak-labels command line option": [[0, "cmdoption-runoak-labels-D"], [0, "cmdoption-runoak-labels-O"], [0, "cmdoption-runoak-labels-S"], [0, "cmdoption-runoak-labels-all-languages"], [0, "cmdoption-runoak-labels-arg-TERMS"], [0, "cmdoption-runoak-labels-if-absent"], [0, "cmdoption-runoak-labels-o"], [0, "cmdoption-runoak-labels-pivot-languages"]], "runoak-leafs command line option": [[0, "cmdoption-runoak-leafs-filter-obsoletes"], [0, "cmdoption-runoak-leafs-o"], [0, "cmdoption-runoak-leafs-p"]], "runoak-lexmatch command line option": [[0, "cmdoption-runoak-lexmatch-L"], [0, "cmdoption-runoak-lexmatch-R"], [0, "cmdoption-runoak-lexmatch-add-labels"], [0, "cmdoption-runoak-lexmatch-arg-TERMS"], [0, "cmdoption-runoak-lexmatch-ensure-strict-prefixes"], [0, "cmdoption-runoak-lexmatch-o"], [0, "cmdoption-runoak-lexmatch-recreate"]], "runoak-lint command line option": [[0, "cmdoption-runoak-lint-O"], [0, "cmdoption-runoak-lint-dry-run"], [0, "cmdoption-runoak-lint-o"], [0, "cmdoption-runoak-lint-report-format"]], "runoak-logical-definitions command line option": [[0, "cmdoption-runoak-logical-definitions-O"], [0, "cmdoption-runoak-logical-definitions-S"], [0, "cmdoption-runoak-logical-definitions-arg-TERMS"], [0, "cmdoption-runoak-logical-definitions-autolabel"], [0, "cmdoption-runoak-logical-definitions-if-absent"], [0, "cmdoption-runoak-logical-definitions-matrix-axes"], [0, "cmdoption-runoak-logical-definitions-o"], [0, "cmdoption-runoak-logical-definitions-p"], [0, "cmdoption-runoak-logical-definitions-unmelt"]], "runoak-mappings command line option": [[0, "cmdoption-runoak-mappings-M"], [0, "cmdoption-runoak-mappings-O"], [0, "cmdoption-runoak-mappings-arg-TERMS"], [0, "cmdoption-runoak-mappings-autolabel"], [0, "cmdoption-runoak-mappings-mapper"], [0, "cmdoption-runoak-mappings-o"]], "runoak-migrate-curies command line option": [[0, "cmdoption-runoak-migrate-curies-O"], [0, "cmdoption-runoak-migrate-curies-arg-CURIE_PAIRS"], [0, "cmdoption-runoak-migrate-curies-o"], [0, "cmdoption-runoak-migrate-curies-replace"]], "runoak-normalize command line option": [[0, "cmdoption-runoak-normalize-M"], [0, "cmdoption-runoak-normalize-O"], [0, "cmdoption-runoak-normalize-arg-TERMS"], [0, "cmdoption-runoak-normalize-autolabel"], [0, "cmdoption-runoak-normalize-o"]], "runoak-obsoletes command line option": [[0, "cmdoption-runoak-obsoletes-O"], [0, "cmdoption-runoak-obsoletes-arg-TERMS"], [0, "cmdoption-runoak-obsoletes-include-merged"], [0, "cmdoption-runoak-obsoletes-o"], [0, "cmdoption-runoak-obsoletes-show-migration-relationships"]], "runoak-ontologies command line option": [[0, "cmdoption-runoak-ontologies-o"]], "runoak-ontology-metadata command line option": [[0, "cmdoption-runoak-ontology-metadata-O"], [0, "cmdoption-runoak-ontology-metadata-all"], [0, "cmdoption-runoak-ontology-metadata-arg-ONTOLOGIES"], [0, "cmdoption-runoak-ontology-metadata-o"]], "runoak-ontology-versions command line option": [[0, "cmdoption-runoak-ontology-versions-all"], [0, "cmdoption-runoak-ontology-versions-arg-ONTOLOGIES"], [0, "cmdoption-runoak-ontology-versions-o"]], "runoak-paths command line option": [[0, "cmdoption-runoak-paths-C"], [0, "cmdoption-runoak-paths-O"], [0, "cmdoption-runoak-paths-S"], [0, "cmdoption-runoak-paths-arg-TERMS"], [0, "cmdoption-runoak-paths-autolabel"], [0, "cmdoption-runoak-paths-directed"], [0, "cmdoption-runoak-paths-exclude-predicates"], [0, "cmdoption-runoak-paths-include-predicates"], [0, "cmdoption-runoak-paths-narrow"], [0, "cmdoption-runoak-paths-o"], [0, "cmdoption-runoak-paths-p"], [0, "cmdoption-runoak-paths-predicate-weights"], [0, "cmdoption-runoak-paths-target"], [0, "cmdoption-runoak-paths-viz"]], "runoak-prefixes command line option": [[0, "cmdoption-runoak-prefixes-O"], [0, "cmdoption-runoak-prefixes-arg-TERMS"], [0, "cmdoption-runoak-prefixes-o"], [0, "cmdoption-runoak-prefixes-used-only"]], "runoak-query command line option": [[0, "cmdoption-runoak-query-L"], [0, "cmdoption-runoak-query-O"], [0, "cmdoption-runoak-query-P"], [0, "cmdoption-runoak-query-autolabel"], [0, "cmdoption-runoak-query-o"], [0, "cmdoption-runoak-query-q"]], "runoak-relationships command line option": [[0, "cmdoption-runoak-relationships-O"], [0, "cmdoption-runoak-relationships-S"], [0, "cmdoption-runoak-relationships-arg-TERMS"], [0, "cmdoption-runoak-relationships-autolabel"], [0, "cmdoption-runoak-relationships-direction"], [0, "cmdoption-runoak-relationships-if-absent"], [0, "cmdoption-runoak-relationships-include-abox"], [0, "cmdoption-runoak-relationships-include-entailed"], [0, "cmdoption-runoak-relationships-include-metadata"], [0, "cmdoption-runoak-relationships-include-tbox"], [0, "cmdoption-runoak-relationships-o"], [0, "cmdoption-runoak-relationships-p"]], "runoak-rollup command line option": [[0, "cmdoption-runoak-rollup-O"], [0, "cmdoption-runoak-rollup-arg-TERMS"], [0, "cmdoption-runoak-rollup-autolabel"], [0, "cmdoption-runoak-rollup-o"], [0, "cmdoption-runoak-rollup-object-group"], [0, "cmdoption-runoak-rollup-p"]], "runoak-roots command line option": [[0, "cmdoption-runoak-roots-A"], [0, "cmdoption-runoak-roots-O"], [0, "cmdoption-runoak-roots-P"], [0, "cmdoption-runoak-roots-o"], [0, "cmdoption-runoak-roots-p"]], "runoak-search command line option": [[0, "cmdoption-runoak-search-O"], [0, "cmdoption-runoak-search-arg-TERMS"], [0, "cmdoption-runoak-search-autolabel"], [0, "cmdoption-runoak-search-o"]], "runoak-set-apikey command line option": [[0, "cmdoption-runoak-set-apikey-arg-KEYVAL"], [0, "cmdoption-runoak-set-apikey-e"]], "runoak-siblings command line option": [[0, "cmdoption-runoak-siblings-O"], [0, "cmdoption-runoak-siblings-arg-TERMS"], [0, "cmdoption-runoak-siblings-o"], [0, "cmdoption-runoak-siblings-p"]], "runoak-similarity command line option": [[0, "cmdoption-runoak-similarity-O"], [0, "cmdoption-runoak-similarity-arg-TERMS"], [0, "cmdoption-runoak-similarity-autolabel"], [0, "cmdoption-runoak-similarity-information-content-file"], [0, "cmdoption-runoak-similarity-main-score-field"], [0, "cmdoption-runoak-similarity-min-ancestor-information-content"], [0, "cmdoption-runoak-similarity-min-jaccard-similarity"], [0, "cmdoption-runoak-similarity-o"], [0, "cmdoption-runoak-similarity-p"], [0, "cmdoption-runoak-similarity-set1-file"], [0, "cmdoption-runoak-similarity-set2-file"]], "runoak-similarity-pair command line option": [[0, "cmdoption-runoak-similarity-pair-O"], [0, "cmdoption-runoak-similarity-pair-arg-TERMS"], [0, "cmdoption-runoak-similarity-pair-autolabel"], [0, "cmdoption-runoak-similarity-pair-o"], [0, "cmdoption-runoak-similarity-pair-p"]], "runoak-singletons command line option": [[0, "cmdoption-runoak-singletons-filter-obsoletes"], [0, "cmdoption-runoak-singletons-o"], [0, "cmdoption-runoak-singletons-p"]], "runoak-statistics command line option": [[0, "cmdoption-runoak-statistics-O"], [0, "cmdoption-runoak-statistics-P"], [0, "cmdoption-runoak-statistics-X"], [0, "cmdoption-runoak-statistics-arg-BRANCHES"], [0, "cmdoption-runoak-statistics-group-by-defined-by"], [0, "cmdoption-runoak-statistics-group-by-obo-namespace"], [0, "cmdoption-runoak-statistics-group-by-prefix"], [0, "cmdoption-runoak-statistics-group-by-property"], [0, "cmdoption-runoak-statistics-include-residuals"], [0, "cmdoption-runoak-statistics-o"]], "runoak-subsets command line option": [[0, "cmdoption-runoak-subsets-o"]], "runoak-synonymize command line option": [[0, "cmdoption-runoak-synonymize-R"], [0, "cmdoption-runoak-synonymize-apply-patch"], [0, "cmdoption-runoak-synonymize-arg-TERMS"], [0, "cmdoption-runoak-synonymize-o"], [0, "cmdoption-runoak-synonymize-patch"]], "runoak-taxon-constraints command line option": [[0, "cmdoption-runoak-taxon-constraints-A"], [0, "cmdoption-runoak-taxon-constraints-M"], [0, "cmdoption-runoak-taxon-constraints-O"], [0, "cmdoption-runoak-taxon-constraints-arg-TERMS"], [0, "cmdoption-runoak-taxon-constraints-direct"], [0, "cmdoption-runoak-taxon-constraints-include-redundant"], [0, "cmdoption-runoak-taxon-constraints-o"], [0, "cmdoption-runoak-taxon-constraints-p"]], "runoak-term-categories command line option": [[0, "cmdoption-runoak-term-categories-O"], [0, "cmdoption-runoak-term-categories-arg-TERMS"], [0, "cmdoption-runoak-term-categories-category-system"], [0, "cmdoption-runoak-term-categories-o"]], "runoak-term-metadata command line option": [[0, "cmdoption-runoak-term-metadata-O"], [0, "cmdoption-runoak-term-metadata-additional-metadata"], [0, "cmdoption-runoak-term-metadata-arg-TERMS"], [0, "cmdoption-runoak-term-metadata-o"], [0, "cmdoption-runoak-term-metadata-p"]], "runoak-term-subsets command line option": [[0, "cmdoption-runoak-term-subsets-O"], [0, "cmdoption-runoak-term-subsets-arg-TERMS"], [0, "cmdoption-runoak-term-subsets-o"]], "runoak-terms command line option": [[0, "cmdoption-runoak-terms-filter-obsoletes"], [0, "cmdoption-runoak-terms-o"], [0, "cmdoption-runoak-terms-owl-type"]], "runoak-termset-similarity command line option": [[0, "cmdoption-runoak-termset-similarity-O"], [0, "cmdoption-runoak-termset-similarity-arg-TERMS"], [0, "cmdoption-runoak-termset-similarity-autolabel"], [0, "cmdoption-runoak-termset-similarity-information-content-file"], [0, "cmdoption-runoak-termset-similarity-o"], [0, "cmdoption-runoak-termset-similarity-p"]], "runoak-transform command line option": [[0, "cmdoption-runoak-transform-O"], [0, "cmdoption-runoak-transform-arg-TERMS"], [0, "cmdoption-runoak-transform-c"], [0, "cmdoption-runoak-transform-o"], [0, "cmdoption-runoak-transform-t"]], "runoak-tree command line option": [[0, "cmdoption-runoak-tree-C"], [0, "cmdoption-runoak-tree-D"], [0, "cmdoption-runoak-tree-O"], [0, "cmdoption-runoak-tree-S"], [0, "cmdoption-runoak-tree-add-mrcas"], [0, "cmdoption-runoak-tree-arg-TERMS"], [0, "cmdoption-runoak-tree-down"], [0, "cmdoption-runoak-tree-gap-fill"], [0, "cmdoption-runoak-tree-max-hops"], [0, "cmdoption-runoak-tree-o"], [0, "cmdoption-runoak-tree-p"], [0, "cmdoption-runoak-tree-root"], [0, "cmdoption-runoak-tree-skip"]], "runoak-validate command line option": [[0, "cmdoption-runoak-validate-O"], [0, "cmdoption-runoak-validate-R"], [0, "cmdoption-runoak-validate-arg-TERMS"], [0, "cmdoption-runoak-validate-cutoff"], [0, "cmdoption-runoak-validate-o"], [0, "cmdoption-runoak-validate-skip-ontology-rules"], [0, "cmdoption-runoak-validate-skip-structural-validation"]], "runoak-validate-definitions command line option": [[0, "cmdoption-runoak-validate-definitions-O"], [0, "cmdoption-runoak-validate-definitions-arg-TERMS"], [0, "cmdoption-runoak-validate-definitions-o"], [0, "cmdoption-runoak-validate-definitions-skip-text-annotation"]], "runoak-validate-mappings command line option": [[0, "cmdoption-runoak-validate-mappings-C"], [0, "cmdoption-runoak-validate-mappings-O"], [0, "cmdoption-runoak-validate-mappings-adapter-mapping"], [0, "cmdoption-runoak-validate-mappings-arg-TERMS"], [0, "cmdoption-runoak-validate-mappings-autolabel"], [0, "cmdoption-runoak-validate-mappings-o"]], "runoak-validate-multiple command line option": [[0, "cmdoption-runoak-validate-multiple-arg-DBS"], [0, "cmdoption-runoak-validate-multiple-cutoff"], [0, "cmdoption-runoak-validate-multiple-o"], [0, "cmdoption-runoak-validate-multiple-s"]], "runoak-viz command line option": [[0, "cmdoption-runoak-viz-C"], [0, "cmdoption-runoak-viz-O"], [0, "cmdoption-runoak-viz-S"], [0, "cmdoption-runoak-viz-add-mrcas"], [0, "cmdoption-runoak-viz-arg-TERMS"], [0, "cmdoption-runoak-viz-down"], [0, "cmdoption-runoak-viz-gap-fill"], [0, "cmdoption-runoak-viz-max-hops"], [0, "cmdoption-runoak-viz-meta"], [0, "cmdoption-runoak-viz-o"], [0, "cmdoption-runoak-viz-p"], [0, "cmdoption-runoak-viz-view"]], "ancestor": [[1108, "term-Ancestor"]], "annotation": [[1108, "term-Annotation"]], "annotationproperty": [[1108, "term-AnnotationProperty"]], "asserted": [[1108, "term-Asserted"]], "association": [[1108, "term-Association"]], "bioportal": [[1108, "term-Bioportal"]], "curie": [[1108, "term-CURIE"]], "category": [[1108, "term-Category"]], "class": [[1108, "term-Class"]], "closure": [[1108, "term-Closure"]], "concept": [[1108, "term-Concept"]], "datamodel": [[1108, "term-Datamodel"]], "datatypeproperty": [[1108, "term-DatatypeProperty"]], "descendant": [[1108, "term-Descendant"]], "diff": [[1108, "term-Diff"]], "edge": [[1108, "term-Edge"]], "entailed": [[1108, "term-Entailed"]], "funowl": [[1108, "term-FunOWL"]], "functional syntax": [[1108, "term-Functional-Syntax"]], "graph": [[1108, "term-Graph"]], "graph traversal": [[1108, "term-Graph-Traversal"]], "is_a:": [[1108, "term-IS_A"]], "identifier": [[1108, "term-Identifier"]], "implementation": [[1108, "term-Implementation"]], "information content": [[1108, "term-Information-Content"]], "input selector": [[1108, "term-Input-Selector"]], "interface": [[1108, "term-Interface"]], "iterator": [[1108, "term-Iterator"]], "kgcl": [[1108, "term-KGCL"]], "label": [[1108, "term-Label"]], "logical definition": [[1108, "term-Logical-Definition"]], "mapping": [[1108, "term-Mapping"]], "name": [[1108, "term-Name"]], "named individual": [[1108, "term-Named-Individual"]], "node": [[1108, "term-Node"]], "obo format": [[1108, "term-OBO-Format"]], "obo graphs": [[1108, "term-OBO-Graphs"]], "ols": [[1108, "term-OLS"]], "owl": [[1108, "term-OWL"]], "owl annotation": [[1108, "term-OWL-Annotation"]], "object": [[1108, "term-Object"]], "object closure": [[1108, "term-Object-Closure"]], "objectproperty": [[1108, "term-ObjectProperty"]], "ontogpt": [[1108, "term-OntoGPT"]], "ontoportal": [[1108, "term-OntoPortal"]], "ontobee": [[1108, "term-Ontobee"]], "ontology": [[1108, "term-Ontology"]], "ontology element": [[1108, "term-Ontology-Element"]], "ontology format": [[1108, "term-Ontology-Format"]], "ontology graph projection": [[1108, "term-Ontology-Graph-Projection"]], "part of": [[1108, "term-Part-Of"]], "patch": [[1108, "term-Patch"]], "predicate": [[1108, "term-Predicate"]], "pronto": [[1108, "term-Pronto"]], "property": [[1108, "term-Property"]], "rdf": [[1108, "term-RDF"]], "reasoner": [[1108, "term-Reasoner"]], "reasoning": [[1108, "term-Reasoning"]], "reflexive": [[1108, "term-Reflexive"]], "relation graph": [[1108, "term-Relation-Graph"]], "relationship": [[1108, "term-Relationship"]], "relationship type": [[1108, "term-Relationship-Type"]], "sparql": [[1108, "term-SPARQL"]], "sql": [[1108, "term-SQL"]], "sssom": [[1108, "term-SSSOM"]], "semantic sql": [[1108, "term-Semantic-SQL"]], "semantic similarity": [[1108, "term-Semantic-Similarity"]], "subject": [[1108, "term-Subject"]], "subject closure": [[1108, "term-Subject-Closure"]], "subset": [[1108, "term-Subset"]], "tautology": [[1108, "term-Tautology"]], "term": [[1108, "term-Term"]], "text annotation": [[1108, "term-Text-Annotation"]], "triple": [[1108, "term-Triple"]], "triplestore": [[1108, "term-Triplestore"]], "uri": [[1108, "term-URI"]], "ubergraph": [[1108, "term-Ubergraph"]], "datamodelconverter (class in oaklib.converters.data_model_converter)": [[1144, "oaklib.converters.data_model_converter.DataModelConverter"]], "convert() (oaklib.converters.data_model_converter.datamodelconverter method)": [[1144, "oaklib.converters.data_model_converter.DataModelConverter.convert"]], "curie_converter (oaklib.converters.data_model_converter.datamodelconverter attribute)": [[1144, "oaklib.converters.data_model_converter.DataModelConverter.curie_converter"]], "dump() (oaklib.converters.data_model_converter.datamodelconverter method)": [[1144, "oaklib.converters.data_model_converter.DataModelConverter.dump"]], "enforce_canonical_ordering (oaklib.converters.data_model_converter.datamodelconverter attribute)": [[1144, "oaklib.converters.data_model_converter.DataModelConverter.enforce_canonical_ordering"]], "labeler (oaklib.converters.data_model_converter.datamodelconverter attribute)": [[1144, "oaklib.converters.data_model_converter.DataModelConverter.labeler"]], "obographtocxconverter (class in oaklib.converters.obo_graph_to_cx_converter)": [[1146, "oaklib.converters.obo_graph_to_cx_converter.OboGraphToCXConverter"]], "convert() (oaklib.converters.obo_graph_to_cx_converter.obographtocxconverter method)": [[1146, "oaklib.converters.obo_graph_to_cx_converter.OboGraphToCXConverter.convert"]], "dump() (oaklib.converters.obo_graph_to_cx_converter.obographtocxconverter method)": [[1146, "oaklib.converters.obo_graph_to_cx_converter.OboGraphToCXConverter.dump"]], "obographtofhirconverter (class in oaklib.converters.obo_graph_to_fhir_converter)": [[1147, "oaklib.converters.obo_graph_to_fhir_converter.OboGraphToFHIRConverter"]], "code() (oaklib.converters.obo_graph_to_fhir_converter.obographtofhirconverter method)": [[1147, "oaklib.converters.obo_graph_to_fhir_converter.OboGraphToFHIRConverter.code"]], "convert() (oaklib.converters.obo_graph_to_fhir_converter.obographtofhirconverter method)": [[1147, "oaklib.converters.obo_graph_to_fhir_converter.OboGraphToFHIRConverter.convert"]], "dump() (oaklib.converters.obo_graph_to_fhir_converter.obographtofhirconverter method)": [[1147, "oaklib.converters.obo_graph_to_fhir_converter.OboGraphToFHIRConverter.dump"]], "obographtooboformatconverter (class in oaklib.converters.obo_graph_to_obo_format_converter)": [[1148, "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter"]], "as_bytes_io() (oaklib.converters.obo_graph_to_obo_format_converter.obographtooboformatconverter method)": [[1148, "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter.as_bytes_io"]], "convert() (oaklib.converters.obo_graph_to_obo_format_converter.obographtooboformatconverter method)": [[1148, "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter.convert"]], "dump() (oaklib.converters.obo_graph_to_obo_format_converter.obographtooboformatconverter method)": [[1148, "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter.dump"]], "dumps() (oaklib.converters.obo_graph_to_obo_format_converter.obographtooboformatconverter method)": [[1148, "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter.dumps"]], "aggregatorimplementation (class in oaklib.implementations.aggregator.aggregator_implementation)": [[1150, "oaklib.implementations.aggregator.aggregator_implementation.AggregatorImplementation"]], "funowlimplementation (class in oaklib.implementations.funowl.funowl_implementation)": [[1152, "oaklib.implementations.funowl.funowl_implementation.FunOwlImplementation"]], "gildaimplementation (class in oaklib.implementations.gilda)": [[1153, "oaklib.implementations.gilda.GildaImplementation"]], "obographimplementation (class in oaklib.implementations.obograph.obograph_implementation)": [[1156, "oaklib.implementations.obograph.obograph_implementation.OboGraphImplementation"]], "olsimplementation (class in oaklib.implementations.ols.ols_implementation)": [[1157, "oaklib.implementations.ols.ols_implementation.OlsImplementation"]], "ontobeeimplementation (class in oaklib.implementations.ontobee.ontobee_implementation)": [[1158, "oaklib.implementations.ontobee.ontobee_implementation.OntobeeImplementation"]], "owleryimplementation (class in oaklib.implementations.owlery.owlery_implementation)": [[1159, "oaklib.implementations.owlery.owlery_implementation.OwleryImplementation"]], "pantherdbimplementation (class in oaklib.implementations.pantherdb.pantherdb_implementation)": [[1160, "oaklib.implementations.pantherdb.pantherdb_implementation.PantherDBImplementation"]], "prontoimplementation (class in oaklib.implementations.pronto.pronto_implementation)": [[1161, "oaklib.implementations.pronto.pronto_implementation.ProntoImplementation"]], "simpleoboimplementation (class in oaklib.implementations.simpleobo.simple_obo_implementation)": [[1163, "oaklib.implementations.simpleobo.simple_obo_implementation.SimpleOboImplementation"]], "sparqlimplementation (class in oaklib.implementations.sparql.sparql_implementation)": [[1164, "oaklib.implementations.sparql.sparql_implementation.SparqlImplementation"]], "edge (class in semsql.sqla.semsql)": [[1165, "semsql.sqla.semsql.Edge"]], "entailededge (class in semsql.sqla.semsql)": [[1165, "semsql.sqla.semsql.EntailedEdge"]], "sqlimplementation (class in oaklib.implementations.sqldb.sql_implementation)": [[1165, "oaklib.implementations.sqldb.sql_implementation.SqlImplementation"]], "statements (class in semsql.sqla.semsql)": [[1165, "semsql.sqla.semsql.Statements"]], "create() (oaklib.implementations.sqldb.sql_implementation.sqlimplementation class method)": [[1165, "oaklib.implementations.sqldb.sql_implementation.SqlImplementation.create"]], "relationgraphenum (class in oaklib.implementations.ubergraph.ubergraph_implementation)": [[1166, "oaklib.implementations.ubergraph.ubergraph_implementation.RelationGraphEnum"]], "ubergraphimplementation (class in oaklib.implementations.ubergraph.ubergraph_implementation)": [[1166, "oaklib.implementations.ubergraph.ubergraph_implementation.UbergraphImplementation"]], "associationproviderinterface (class in oaklib.interfaces.association_provider_interface)": [[1168, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface"]], "add_associations() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1168, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.add_associations"]], "association_counts() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1168, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.association_counts"]], "association_pairwise_coassociations() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1168, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.association_pairwise_coassociations"]], "association_subject_counts() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1168, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.association_subject_counts"]], "associations() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1168, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.associations"]], "associations_subject_search() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1168, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.associations_subject_search"]], "associations_subjects() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1168, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.associations_subjects"]], "map_associations() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1168, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.map_associations"]], "normalize_association() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1168, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.normalize_association"]], "normalize_associations() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1168, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.normalize_associations"]], "basicontologyinterface (class in oaklib.interfaces.basic_ontology_interface)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface"]], "add_missing_property_values() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.add_missing_property_values"]], "alias_map_by_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.alias_map_by_curie"]], "aliases_by_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.aliases_by_curie"]], "all_entity_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.all_entity_curies"]], "all_obsolete_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.all_obsolete_curies"]], "all_ontology_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.all_ontology_curies"]], "all_relationships() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.all_relationships"]], "all_subset_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.all_subset_curies"]], "auto_relax_axioms (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.auto_relax_axioms"]], "autosave (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.autosave"]], "cache_lookups (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.cache_lookups"]], "clone() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.clone"]], "comments() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.comments"]], "converter (oaklib.interfaces.basic_ontology_interface.basicontologyinterface property)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.converter"]], "create_entity() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.create_entity"]], "curie_to_uri() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.curie_to_uri"]], "curies_by_label() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.curies_by_label"]], "curies_by_subset() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.curies_by_subset"]], "dangling() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.dangling"]], "default_language (oaklib.interfaces.basic_ontology_interface.basicontologyinterface property)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.default_language"]], "defined_by() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.defined_by"]], "defined_bys() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.defined_bys"]], "definition() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.definition"]], "definitions() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.definitions"]], "delete_entity() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.delete_entity"]], "edge_index (oaklib.interfaces.basic_ontology_interface.basicontologyinterface property)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.edge_index"]], "entailed_edge_index (oaklib.interfaces.basic_ontology_interface.basicontologyinterface property)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entailed_edge_index"]], "entities() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entities"]], "entities_metadata_statements() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entities_metadata_statements"]], "entity_alias_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entity_alias_map"]], "entity_aliases() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entity_aliases"]], "entity_metadata_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entity_metadata_map"]], "exclude_owl_top_and_bottom (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.exclude_owl_top_and_bottom"]], "get_curies_by_label() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.get_curies_by_label"]], "get_definition_by_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.get_definition_by_curie"]], "get_label_by_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.get_label_by_curie"]], "get_labels_for_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.get_labels_for_curies"]], "get_prefix_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.get_prefix_map"]], "hierarchical_parents() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.hierarchical_parents"]], "incoming_relationship_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.incoming_relationship_map"]], "incoming_relationships() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.incoming_relationships"]], "label() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.label"]], "labels() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.labels"]], "languages() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.languages"]], "leafs() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.leafs"]], "multilingual (oaklib.interfaces.basic_ontology_interface.basicontologyinterface property)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.multilingual"]], "multilingual_labels() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.multilingual_labels"]], "obsoletes() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.obsoletes"]], "obsoletes_migration_relationships() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.obsoletes_migration_relationships"]], "ontologies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.ontologies"]], "ontology_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.ontology_curies"]], "ontology_metadata_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.ontology_metadata_map"]], "ontology_metamodel_mapper (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.ontology_metamodel_mapper"]], "ontology_versions() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.ontology_versions"]], "outgoing_relationship_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.outgoing_relationship_map"]], "outgoing_relationships() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.outgoing_relationships"]], "owl_type() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.owl_type"]], "owl_types() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.owl_types"]], "precompute_lookups() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.precompute_lookups"]], "prefix_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.prefix_map"]], "query() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.query"]], "relationships() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.relationships"]], "relationships_metadata() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.relationships_metadata"]], "roots() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.roots"]], "save() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.save"]], "set_label() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.set_label"]], "set_metamodel_mappings() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.set_metamodel_mappings"]], "simple_mappings() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.simple_mappings"]], "simple_mappings_by_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.simple_mappings_by_curie"]], "singletons() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.singletons"]], "strict (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.strict"]], "subset_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.subset_curies"]], "subset_members() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.subset_members"]], "subsets() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.subsets"]], "terms_categories() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.terms_categories"]], "terms_subsets() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.terms_subsets"]], "uri_to_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1169, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.uri_to_curie"]], "classenrichmentcalculationinterface (class in oaklib.interfaces.class_enrichment_calculation_interface)": [[1170, "oaklib.interfaces.class_enrichment_calculation_interface.ClassEnrichmentCalculationInterface"]], "create_self_associations() (oaklib.interfaces.class_enrichment_calculation_interface.classenrichmentcalculationinterface method)": [[1170, "oaklib.interfaces.class_enrichment_calculation_interface.ClassEnrichmentCalculationInterface.create_self_associations"]], "enriched_classes() (oaklib.interfaces.class_enrichment_calculation_interface.classenrichmentcalculationinterface method)": [[1170, "oaklib.interfaces.class_enrichment_calculation_interface.ClassEnrichmentCalculationInterface.enriched_classes"]], "differinterface (class in oaklib.interfaces.differ_interface)": [[1171, "oaklib.interfaces.differ_interface.DifferInterface"]], "autosave (oaklib.interfaces.differ_interface.differinterface attribute)": [[1171, "oaklib.interfaces.differ_interface.DifferInterface.autosave"]], "compare_ontology_term_lists() (oaklib.interfaces.differ_interface.differinterface method)": [[1171, "oaklib.interfaces.differ_interface.DifferInterface.compare_ontology_term_lists"]], "diff() (oaklib.interfaces.differ_interface.differinterface method)": [[1171, "oaklib.interfaces.differ_interface.DifferInterface.diff"]], "diff_summary() (oaklib.interfaces.differ_interface.differinterface method)": [[1171, "oaklib.interfaces.differ_interface.DifferInterface.diff_summary"]], "exclude_owl_top_and_bottom (oaklib.interfaces.differ_interface.differinterface attribute)": [[1171, "oaklib.interfaces.differ_interface.DifferInterface.exclude_owl_top_and_bottom"]], "grouped_diff() (oaklib.interfaces.differ_interface.differinterface method)": [[1171, "oaklib.interfaces.differ_interface.DifferInterface.grouped_diff"]], "dumperinterface (class in oaklib.interfaces.dumper_interface)": [[1172, "oaklib.interfaces.dumper_interface.DumperInterface"]], "autosave (oaklib.interfaces.dumper_interface.dumperinterface attribute)": [[1172, "oaklib.interfaces.dumper_interface.DumperInterface.autosave"]], "dump() (oaklib.interfaces.dumper_interface.dumperinterface method)": [[1172, "oaklib.interfaces.dumper_interface.DumperInterface.dump"]], "exclude_owl_top_and_bottom (oaklib.interfaces.dumper_interface.dumperinterface attribute)": [[1172, "oaklib.interfaces.dumper_interface.DumperInterface.exclude_owl_top_and_bottom"]], "mappingproviderinterface (class in oaklib.interfaces.mapping_provider_interface)": [[1174, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface"]], "all_sssom_mappings() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1174, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.all_sssom_mappings"]], "autosave (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface attribute)": [[1174, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.autosave"]], "create_normalization_map() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1174, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.create_normalization_map"]], "exclude_owl_top_and_bottom (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface attribute)": [[1174, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.exclude_owl_top_and_bottom"]], "get_sssom_mappings_by_curie() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1174, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.get_sssom_mappings_by_curie"]], "get_transitive_mappings_by_curie() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1174, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.get_transitive_mappings_by_curie"]], "normalize() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1174, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.normalize"]], "normalize_prefix() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1174, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.normalize_prefix"]], "sssom_mappings() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1174, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.sssom_mappings"]], "sssom_mappings_by_source() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1174, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.sssom_mappings_by_source"]], "obographinterface (class in oaklib.interfaces.obograph_interface)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface"]], "traversalconfiguration (class in oaklib.interfaces.obograph_interface)": [[1175, "oaklib.interfaces.obograph_interface.TraversalConfiguration"]], "add_metadata() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.add_metadata"]], "ancestor_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.ancestor_graph"]], "ancestors() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.ancestors"]], "as_obograph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.as_obograph"]], "descendant_count() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.descendant_count"]], "descendant_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.descendant_graph"]], "descendants() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.descendants"]], "disable_transitive_query_cache() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.disable_transitive_query_cache"]], "disjoint_class_expressions_axioms() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.disjoint_class_expressions_axioms"]], "edges() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.edges"]], "enable_transitive_query_cache() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.enable_transitive_query_cache"]], "extract_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.extract_graph"]], "load_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.load_graph"]], "logical_definitions() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.logical_definitions"]], "node() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.node"]], "nodes() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.nodes"]], "paths() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.paths"]], "relationships_to_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.relationships_to_graph"]], "subgraph_from_traversal() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.subgraph_from_traversal"]], "synonym_map_for_curies() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.synonym_map_for_curies"]], "walk_up_relationship_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1175, "oaklib.interfaces.obograph_interface.OboGraphInterface.walk_up_relationship_graph"]], "owlinterface (class in oaklib.interfaces.owl_interface)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface"]], "annotation_assertion_axioms() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.annotation_assertion_axioms"]], "axiom_is_about() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.axiom_is_about"]], "axiom_references() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.axiom_references"]], "disjoint_pairs() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.disjoint_pairs"]], "equivalence_axioms() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.equivalence_axioms"]], "is_disjoint() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.is_disjoint"]], "is_satisfiable() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.is_satisfiable"]], "property_characteristics() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.property_characteristics"]], "reasoner_configurations() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.reasoner_configurations"]], "simple_subproperty_of_chains() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.simple_subproperty_of_chains"]], "subclass_axioms() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.subclass_axioms"]], "transitive_object_properties() (oaklib.interfaces.owl_interface.owlinterface method)": [[1176, "oaklib.interfaces.owl_interface.OwlInterface.transitive_object_properties"]], "patcherinterface (class in oaklib.interfaces.patcher_interface)": [[1177, "oaklib.interfaces.patcher_interface.PatcherInterface"]], "apply_patch() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1177, "oaklib.interfaces.patcher_interface.PatcherInterface.apply_patch"]], "auto_add_contributor_using (oaklib.interfaces.patcher_interface.patcherinterface attribute)": [[1177, "oaklib.interfaces.patcher_interface.PatcherInterface.auto_add_contributor_using"]], "expand_change() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1177, "oaklib.interfaces.patcher_interface.PatcherInterface.expand_change"]], "expand_changes() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1177, "oaklib.interfaces.patcher_interface.PatcherInterface.expand_changes"]], "ignore_invalid_changes (oaklib.interfaces.patcher_interface.patcherinterface attribute)": [[1177, "oaklib.interfaces.patcher_interface.PatcherInterface.ignore_invalid_changes"]], "migrate_curies() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1177, "oaklib.interfaces.patcher_interface.PatcherInterface.migrate_curies"]], "reverse_changes() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1177, "oaklib.interfaces.patcher_interface.PatcherInterface.reverse_changes"]], "save() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1177, "oaklib.interfaces.patcher_interface.PatcherInterface.save"]], "undo() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1177, "oaklib.interfaces.patcher_interface.PatcherInterface.undo"]], "relationgraphinterface (class in oaklib.interfaces.relation_graph_interface)": [[1178, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface"]], "autosave (oaklib.interfaces.relation_graph_interface.relationgraphinterface attribute)": [[1178, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface.autosave"]], "entailed_incoming_relationships() (oaklib.interfaces.relation_graph_interface.relationgraphinterface method)": [[1178, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface.entailed_incoming_relationships"]], "entailed_outgoing_relationships() (oaklib.interfaces.relation_graph_interface.relationgraphinterface method)": [[1178, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface.entailed_outgoing_relationships"]], "entailed_relationships_between() (oaklib.interfaces.relation_graph_interface.relationgraphinterface method)": [[1178, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface.entailed_relationships_between"]], "exclude_owl_top_and_bottom (oaklib.interfaces.relation_graph_interface.relationgraphinterface attribute)": [[1178, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface.exclude_owl_top_and_bottom"]], "searchconfiguration (class in oaklib.interfaces.search_interface)": [[1179, "oaklib.interfaces.search_interface.SearchConfiguration"]], "searchinterface (class in oaklib.interfaces.search_interface)": [[1179, "oaklib.interfaces.search_interface.SearchInterface"]], "autosave (oaklib.interfaces.search_interface.searchinterface attribute)": [[1179, "oaklib.interfaces.search_interface.SearchInterface.autosave"]], "basic_search() (oaklib.interfaces.search_interface.searchinterface method)": [[1179, "oaklib.interfaces.search_interface.SearchInterface.basic_search"]], "exclude_owl_top_and_bottom (oaklib.interfaces.search_interface.searchinterface attribute)": [[1179, "oaklib.interfaces.search_interface.SearchInterface.exclude_owl_top_and_bottom"]], "multiterm_search() (oaklib.interfaces.search_interface.searchinterface method)": [[1179, "oaklib.interfaces.search_interface.SearchInterface.multiterm_search"]], "semanticsimilarityinterface (class in oaklib.interfaces.semsim_interface)": [[1180, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface"]], "all_by_all_pairwise_similarity() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1180, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.all_by_all_pairwise_similarity"]], "cached_information_content_map (oaklib.interfaces.semsim_interface.semanticsimilarityinterface attribute)": [[1180, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.cached_information_content_map"]], "common_ancestors() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1180, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.common_ancestors"]], "get_information_content() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1180, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.get_information_content"]], "information_content_scores() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1180, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.information_content_scores"]], "most_recent_common_ancestors() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1180, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.most_recent_common_ancestors"]], "multiset_most_recent_common_ancestors() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1180, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.multiset_most_recent_common_ancestors"]], "pairwise_similarity() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1180, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.pairwise_similarity"]], "setwise_most_recent_common_ancestors() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1180, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.setwise_most_recent_common_ancestors"]], "subsetterinterface (class in oaklib.interfaces.subsetter_interface)": [[1181, "oaklib.interfaces.subsetter_interface.SubsetterInterface"]], "autosave (oaklib.interfaces.subsetter_interface.subsetterinterface attribute)": [[1181, "oaklib.interfaces.subsetter_interface.SubsetterInterface.autosave"]], "exclude_owl_top_and_bottom (oaklib.interfaces.subsetter_interface.subsetterinterface attribute)": [[1181, "oaklib.interfaces.subsetter_interface.SubsetterInterface.exclude_owl_top_and_bottom"]], "extract_subset_ontology() (oaklib.interfaces.subsetter_interface.subsetterinterface method)": [[1181, "oaklib.interfaces.subsetter_interface.SubsetterInterface.extract_subset_ontology"]], "gap_fill_relationships() (oaklib.interfaces.subsetter_interface.subsetterinterface method)": [[1181, "oaklib.interfaces.subsetter_interface.SubsetterInterface.gap_fill_relationships"]], "summarystatisticsinterface (class in oaklib.interfaces.summary_statistics_interface)": [[1182, "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface"]], "branch_summary_statistics() (oaklib.interfaces.summary_statistics_interface.summarystatisticsinterface method)": [[1182, "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface.branch_summary_statistics"]], "global_summary_statistics() (oaklib.interfaces.summary_statistics_interface.summarystatisticsinterface method)": [[1182, "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface.global_summary_statistics"]], "metadata_property_summary_statistics() (oaklib.interfaces.summary_statistics_interface.summarystatisticsinterface method)": [[1182, "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface.metadata_property_summary_statistics"]], "summary_statistic_description() (oaklib.interfaces.summary_statistics_interface.summarystatisticsinterface method)": [[1182, "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface.summary_statistic_description"]], "textannotation (class in oaklib.datamodels.text_annotator)": [[1183, "oaklib.datamodels.text_annotator.TextAnnotation"]], "textannotatorinterface (class in oaklib.interfaces.text_annotator_interface)": [[1183, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface"]], "annotate_file() (oaklib.interfaces.text_annotator_interface.textannotatorinterface method)": [[1183, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.annotate_file"]], "annotate_tabular_file() (oaklib.interfaces.text_annotator_interface.textannotatorinterface method)": [[1183, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.annotate_tabular_file"]], "annotate_text() (oaklib.interfaces.text_annotator_interface.textannotatorinterface method)": [[1183, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.annotate_text"]], "cache_directory (oaklib.interfaces.text_annotator_interface.textannotatorinterface attribute)": [[1183, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.cache_directory"]], "lexical_index (oaklib.interfaces.text_annotator_interface.textannotatorinterface attribute)": [[1183, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.lexical_index"]], "rule_collection (oaklib.interfaces.text_annotator_interface.textannotatorinterface attribute)": [[1183, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.rule_collection"]], "validatorinterface (class in oaklib.interfaces.validator_interface)": [[1184, "oaklib.interfaces.validator_interface.ValidatorInterface"]], "autosave (oaklib.interfaces.validator_interface.validatorinterface attribute)": [[1184, "oaklib.interfaces.validator_interface.ValidatorInterface.autosave"]], "exclude_owl_top_and_bottom (oaklib.interfaces.validator_interface.validatorinterface attribute)": [[1184, "oaklib.interfaces.validator_interface.ValidatorInterface.exclude_owl_top_and_bottom"]], "is_coherent() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1184, "oaklib.interfaces.validator_interface.ValidatorInterface.is_coherent"]], "repair() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1184, "oaklib.interfaces.validator_interface.ValidatorInterface.repair"]], "term_curies_without_definitions() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1184, "oaklib.interfaces.validator_interface.ValidatorInterface.term_curies_without_definitions"]], "unsatisfiable_classes() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1184, "oaklib.interfaces.validator_interface.ValidatorInterface.unsatisfiable_classes"]], "validate() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1184, "oaklib.interfaces.validator_interface.ValidatorInterface.validate"]], "validate_mappings() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1184, "oaklib.interfaces.validator_interface.ValidatorInterface.validate_mappings"]], "add_associations() (in module oaklib.selector)": [[1185, "oaklib.selector.add_associations"]], "get_adapter() (in module oaklib.selector)": [[1185, "oaklib.selector.get_adapter"]], "get_implementation_class_from_scheme() (in module oaklib.selector)": [[1185, "oaklib.selector.get_implementation_class_from_scheme"]], "get_implementation_from_shorthand() (in module oaklib.selector)": [[1185, "oaklib.selector.get_implementation_from_shorthand"]], "get_resource_from_shorthand() (in module oaklib.selector)": [[1185, "oaklib.selector.get_resource_from_shorthand"]], "module": [[1185, "module-oaklib.selector"], [1186, "module-oaklib.utilities.apikey_manager"], [1187, "module-oaklib.utilities.graph.networkx_bridge"], [1188, "module-oaklib.utilities.graph.relationship_walker"], [1189, "module-oaklib.utilities.lexical.lexical_indexer"], [1190, "module-oaklib.utilities.obograph_utils"], [1191, "module-oaklib.utilities.subsets.slimmer_utils"], [1192, "module-oaklib.utilities.table_filler"], [1193, "module-oaklib.utilities.taxon"], [1196, "module-oaklib.datamodels.search"]], "oaklib.selector": [[1185, "module-oaklib.selector"]], "oaklib.utilities.apikey_manager": [[1186, "module-oaklib.utilities.apikey_manager"]], "oaklib.utilities.graph.networkx_bridge": [[1187, "module-oaklib.utilities.graph.networkx_bridge"]], "oaklib.utilities.graph.relationship_walker": [[1188, "module-oaklib.utilities.graph.relationship_walker"]], "oaklib.utilities.lexical.lexical_indexer": [[1189, "module-oaklib.utilities.lexical.lexical_indexer"]], "oaklib.utilities.obograph_utils": [[1190, "module-oaklib.utilities.obograph_utils"]], "oaklib.utilities.subsets.slimmer_utils": [[1191, "module-oaklib.utilities.subsets.slimmer_utils"]], "oaklib.utilities.table_filler": [[1192, "module-oaklib.utilities.table_filler"]], "oaklib.utilities.taxon": [[1193, "module-oaklib.utilities.taxon"]], "searchconfiguration (class in oaklib.datamodels.search)": [[1196, "oaklib.datamodels.search.SearchConfiguration"]], "create_search_configuration() (in module oaklib.datamodels.search)": [[1196, "oaklib.datamodels.search.create_search_configuration"]], "oaklib.datamodels.search": [[1196, "module-oaklib.datamodels.search"]]}}) \ No newline at end of file +Search.setIndex({"docnames": ["cli", "concepts", "contributing", "datamodels/association/Association", "datamodels/association/AssociationChange", "datamodels/association/Boolean", "datamodels/association/Curie", "datamodels/association/Date", "datamodels/association/DateOrDatetime", "datamodels/association/Datetime", "datamodels/association/Decimal", "datamodels/association/Double", "datamodels/association/Float", "datamodels/association/Integer", "datamodels/association/Jsonpath", "datamodels/association/Jsonpointer", "datamodels/association/Ncname", "datamodels/association/NegatedAssociation", "datamodels/association/Nodeidentifier", "datamodels/association/Objectidentifier", "datamodels/association/PairwiseCoAssociation", "datamodels/association/ParserConfiguration", "datamodels/association/PositiveOrNegativeAssociation", "datamodels/association/PropertyValue", "datamodels/association/RollupGroup", "datamodels/association/Sparqlpath", "datamodels/association/String", "datamodels/association/Time", "datamodels/association/Uri", "datamodels/association/Uriorcurie", "datamodels/association/aggregator_knowledge_source", "datamodels/association/association", "datamodels/association/associations", "datamodels/association/associations_for_subjects_in_common", "datamodels/association/closure_delta", "datamodels/association/closure_information_content_delta", "datamodels/association/closure_predicates", "datamodels/association/comments", "datamodels/association/core_triple", "datamodels/association/creation_date", "datamodels/association/date", "datamodels/association/denormalized_slot", "datamodels/association/diff_slot", "datamodels/association/evidence_type", "datamodels/association/group_object", "datamodels/association/include_association_attributes", "datamodels/association/index", "datamodels/association/is_creation", "datamodels/association/is_deletion", "datamodels/association/is_generalization", "datamodels/association/is_migration", "datamodels/association/is_specialization", "datamodels/association/modification_date", "datamodels/association/negated", "datamodels/association/new_date", "datamodels/association/new_object", "datamodels/association/new_predicate", "datamodels/association/number_subject_unique_to_entity1", "datamodels/association/number_subject_unique_to_entity2", "datamodels/association/number_subjects_in_common", "datamodels/association/number_subjects_in_union", "datamodels/association/object", "datamodels/association/object1", "datamodels/association/object1_label", "datamodels/association/object2", "datamodels/association/object2_label", "datamodels/association/object_closure", "datamodels/association/object_closure_label", "datamodels/association/object_label", "datamodels/association/old_date", "datamodels/association/old_object", "datamodels/association/old_object_obsolete", "datamodels/association/old_predicate", "datamodels/association/original_object", "datamodels/association/original_predicate", "datamodels/association/original_subject", "datamodels/association/predicate", "datamodels/association/predicate_label", "datamodels/association/preserve_negated_associations", "datamodels/association/primary_knowledge_source", "datamodels/association/property_values", "datamodels/association/proportion_subjects_in_common", "datamodels/association/publication_is_added", "datamodels/association/publication_is_deleted", "datamodels/association/publications", "datamodels/association/sub_groups", "datamodels/association/subject", "datamodels/association/subject_closure", "datamodels/association/subject_closure_label", "datamodels/association/subject_label", "datamodels/association/subjects_in_common", "datamodels/association/summary_group", "datamodels/association/supporting_objects", "datamodels/class-enrichment/Boolean", "datamodels/class-enrichment/ClassEnrichmentConfiguration", "datamodels/class-enrichment/ClassEnrichmentResult", "datamodels/class-enrichment/ClassEnrichmentResultSet", "datamodels/class-enrichment/Curie", "datamodels/class-enrichment/Date", "datamodels/class-enrichment/DateOrDatetime", "datamodels/class-enrichment/Datetime", "datamodels/class-enrichment/Decimal", "datamodels/class-enrichment/Double", "datamodels/class-enrichment/Float", "datamodels/class-enrichment/Integer", "datamodels/class-enrichment/Jsonpath", "datamodels/class-enrichment/Jsonpointer", "datamodels/class-enrichment/Ncname", "datamodels/class-enrichment/Nodeidentifier", "datamodels/class-enrichment/Objectidentifier", "datamodels/class-enrichment/Position", "datamodels/class-enrichment/SortFieldEnum", "datamodels/class-enrichment/Sparqlpath", "datamodels/class-enrichment/String", "datamodels/class-enrichment/Time", "datamodels/class-enrichment/Uri", "datamodels/class-enrichment/Uriorcurie", "datamodels/class-enrichment/ancestor_of_more_informative_result", "datamodels/class-enrichment/background_count", "datamodels/class-enrichment/background_total", "datamodels/class-enrichment/class-enrichment", "datamodels/class-enrichment/class_id", "datamodels/class-enrichment/class_label", "datamodels/class-enrichment/descendant_of_more_informative_result", "datamodels/class-enrichment/direction", "datamodels/class-enrichment/false_discovery_rate", "datamodels/class-enrichment/fold_enrichment", "datamodels/class-enrichment/index", "datamodels/class-enrichment/p_value", "datamodels/class-enrichment/p_value_adjusted", "datamodels/class-enrichment/p_value_cutoff", "datamodels/class-enrichment/probability", "datamodels/class-enrichment/rank", "datamodels/class-enrichment/results", "datamodels/class-enrichment/sample_count", "datamodels/class-enrichment/sample_total", "datamodels/cross-ontology-diff/Boolean", "datamodels/cross-ontology-diff/Curie", "datamodels/cross-ontology-diff/Date", "datamodels/cross-ontology-diff/DateOrDatetime", "datamodels/cross-ontology-diff/Datetime", "datamodels/cross-ontology-diff/Decimal", "datamodels/cross-ontology-diff/DiffCategory", "datamodels/cross-ontology-diff/Double", "datamodels/cross-ontology-diff/EntityReference", "datamodels/cross-ontology-diff/Float", "datamodels/cross-ontology-diff/Integer", "datamodels/cross-ontology-diff/Jsonpath", "datamodels/cross-ontology-diff/Jsonpointer", "datamodels/cross-ontology-diff/Label", "datamodels/cross-ontology-diff/MappingCardinalityEnum", "datamodels/cross-ontology-diff/Ncname", "datamodels/cross-ontology-diff/Nodeidentifier", "datamodels/cross-ontology-diff/Objectidentifier", "datamodels/cross-ontology-diff/Position", "datamodels/cross-ontology-diff/RelationalDiff", "datamodels/cross-ontology-diff/Source", "datamodels/cross-ontology-diff/Sparqlpath", "datamodels/cross-ontology-diff/String", "datamodels/cross-ontology-diff/StructureDiffResultSet", "datamodels/cross-ontology-diff/Time", "datamodels/cross-ontology-diff/Uri", "datamodels/cross-ontology-diff/Uriorcurie", "datamodels/cross-ontology-diff/category", "datamodels/cross-ontology-diff/cross-ontology-diff", "datamodels/cross-ontology-diff/index", "datamodels/cross-ontology-diff/is_functional", "datamodels/cross-ontology-diff/label", "datamodels/cross-ontology-diff/left_object_id", "datamodels/cross-ontology-diff/left_object_is_functional", "datamodels/cross-ontology-diff/left_object_label", "datamodels/cross-ontology-diff/left_object_name", "datamodels/cross-ontology-diff/left_predicate_id", "datamodels/cross-ontology-diff/left_predicate_label", "datamodels/cross-ontology-diff/left_predicate_name", "datamodels/cross-ontology-diff/left_side", "datamodels/cross-ontology-diff/left_source", "datamodels/cross-ontology-diff/left_subject_id", "datamodels/cross-ontology-diff/left_subject_is_functional", "datamodels/cross-ontology-diff/left_subject_label", "datamodels/cross-ontology-diff/left_subject_name", "datamodels/cross-ontology-diff/object", "datamodels/cross-ontology-diff/object_mapping_cardinality", "datamodels/cross-ontology-diff/object_mapping_predicate", "datamodels/cross-ontology-diff/predicate", "datamodels/cross-ontology-diff/results", "datamodels/cross-ontology-diff/right_intermediate_ids", "datamodels/cross-ontology-diff/right_object_id", "datamodels/cross-ontology-diff/right_object_label", "datamodels/cross-ontology-diff/right_object_name", "datamodels/cross-ontology-diff/right_predicate_ids", "datamodels/cross-ontology-diff/right_predicate_labels", "datamodels/cross-ontology-diff/right_predicate_names", "datamodels/cross-ontology-diff/right_side", "datamodels/cross-ontology-diff/right_source", "datamodels/cross-ontology-diff/right_subject_id", "datamodels/cross-ontology-diff/right_subject_label", "datamodels/cross-ontology-diff/right_subject_name", "datamodels/cross-ontology-diff/side", "datamodels/cross-ontology-diff/subject", "datamodels/cross-ontology-diff/subject_mapping_cardinality", "datamodels/cross-ontology-diff/subject_mapping_predicate", "datamodels/cross-ontology-diff/types", "datamodels/funowl/index", "datamodels/index", "datamodels/item-list/Boolean", "datamodels/item-list/Curie", "datamodels/item-list/Date", "datamodels/item-list/DateOrDatetime", "datamodels/item-list/Datetime", "datamodels/item-list/Decimal", "datamodels/item-list/Double", "datamodels/item-list/Float", "datamodels/item-list/Integer", "datamodels/item-list/ItemList", "datamodels/item-list/ItemListCollection", "datamodels/item-list/ItemListOrderType", "datamodels/item-list/Jsonpath", "datamodels/item-list/Jsonpointer", "datamodels/item-list/ListItem", "datamodels/item-list/Ncname", "datamodels/item-list/Nodeidentifier", "datamodels/item-list/Objectidentifier", "datamodels/item-list/Sparqlpath", "datamodels/item-list/String", "datamodels/item-list/Thing", "datamodels/item-list/Time", "datamodels/item-list/Uri", "datamodels/item-list/Uriorcurie", "datamodels/item-list/additionalType", "datamodels/item-list/categories", "datamodels/item-list/description", "datamodels/item-list/elementId", "datamodels/item-list/id", "datamodels/item-list/idType", "datamodels/item-list/identifiers", "datamodels/item-list/index", "datamodels/item-list/item", "datamodels/item-list/itemList", "datamodels/item-list/itemListElements", "datamodels/item-list/itemLists", "datamodels/item-list/itemMetadataMap", "datamodels/item-list/keywords", "datamodels/item-list/name", "datamodels/item-list/numberOfItems", "datamodels/item-list/position", "datamodels/item-list/previousItem", "datamodels/item-list/type", "datamodels/item-list/url", "datamodels/item-list/wasGeneratedBy", "datamodels/kgcl/index", "datamodels/lexical-index/Activity", "datamodels/lexical-index/Any", "datamodels/lexical-index/Boolean", "datamodels/lexical-index/Curie", "datamodels/lexical-index/Date", "datamodels/lexical-index/DateOrDatetime", "datamodels/lexical-index/Datetime", "datamodels/lexical-index/Decimal", "datamodels/lexical-index/Double", "datamodels/lexical-index/Float", "datamodels/lexical-index/Integer", "datamodels/lexical-index/Jsonpath", "datamodels/lexical-index/Jsonpointer", "datamodels/lexical-index/LexicalGrouping", "datamodels/lexical-index/LexicalIndex", "datamodels/lexical-index/LexicalTransformation", "datamodels/lexical-index/LexicalTransformationPipeline", "datamodels/lexical-index/Ncname", "datamodels/lexical-index/Nodeidentifier", "datamodels/lexical-index/Objectidentifier", "datamodels/lexical-index/RelationshipToTerm", "datamodels/lexical-index/Sparqlpath", "datamodels/lexical-index/String", "datamodels/lexical-index/Time", "datamodels/lexical-index/TransformationType", "datamodels/lexical-index/Uri", "datamodels/lexical-index/Uriorcurie", "datamodels/lexical-index/element", "datamodels/lexical-index/element_term", "datamodels/lexical-index/groupings", "datamodels/lexical-index/index", "datamodels/lexical-index/lexical-index", "datamodels/lexical-index/lexican-index", "datamodels/lexical-index/name", "datamodels/lexical-index/params", "datamodels/lexical-index/pipeline", "datamodels/lexical-index/pipelines", "datamodels/lexical-index/predicate", "datamodels/lexical-index/relationships", "datamodels/lexical-index/source", "datamodels/lexical-index/synonymized", "datamodels/lexical-index/term", "datamodels/lexical-index/transformations", "datamodels/lexical-index/type", "datamodels/lexical-index/types", "datamodels/mapping-rules/Activity", "datamodels/mapping-rules/Any", "datamodels/mapping-rules/Boolean", "datamodels/mapping-rules/Curie", "datamodels/mapping-rules/Date", "datamodels/mapping-rules/DateOrDatetime", "datamodels/mapping-rules/Datetime", "datamodels/mapping-rules/Decimal", "datamodels/mapping-rules/Double", "datamodels/mapping-rules/Float", "datamodels/mapping-rules/Integer", "datamodels/mapping-rules/Jsonpath", "datamodels/mapping-rules/Jsonpointer", "datamodels/mapping-rules/LexicalGrouping", "datamodels/mapping-rules/LexicalIndex", "datamodels/mapping-rules/LexicalTransformation", "datamodels/mapping-rules/LexicalTransformationPipeline", "datamodels/mapping-rules/MappingRule", "datamodels/mapping-rules/MappingRuleCollection", "datamodels/mapping-rules/Ncname", "datamodels/mapping-rules/Nodeidentifier", "datamodels/mapping-rules/Objectidentifier", "datamodels/mapping-rules/Postcondition", "datamodels/mapping-rules/Precondition", "datamodels/mapping-rules/RegularExpressionString", "datamodels/mapping-rules/RelationshipToTerm", "datamodels/mapping-rules/RuleSet", "datamodels/mapping-rules/Sparqlpath", "datamodels/mapping-rules/String", "datamodels/mapping-rules/Synonymizer", "datamodels/mapping-rules/Test", "datamodels/mapping-rules/Time", "datamodels/mapping-rules/TransformationType", "datamodels/mapping-rules/Uri", "datamodels/mapping-rules/Uriorcurie", "datamodels/mapping-rules/description", "datamodels/mapping-rules/element", "datamodels/mapping-rules/element_term", "datamodels/mapping-rules/groupings", "datamodels/mapping-rules/index", "datamodels/mapping-rules/input", "datamodels/mapping-rules/lexical-index", "datamodels/mapping-rules/lexican-index", "datamodels/mapping-rules/mapping-rules", "datamodels/mapping-rules/mapping-rules-datamodel", "datamodels/mapping-rules/mapping_source_one_of", "datamodels/mapping-rules/match", "datamodels/mapping-rules/match_scope", "datamodels/mapping-rules/minimum_confidence", "datamodels/mapping-rules/name", "datamodels/mapping-rules/object_match_field_one_of", "datamodels/mapping-rules/object_source_one_of", "datamodels/mapping-rules/oneway", "datamodels/mapping-rules/output", "datamodels/mapping-rules/params", "datamodels/mapping-rules/pipeline", "datamodels/mapping-rules/pipelines", "datamodels/mapping-rules/postconditions", "datamodels/mapping-rules/preconditions", "datamodels/mapping-rules/predicate", "datamodels/mapping-rules/predicate_id", "datamodels/mapping-rules/predicate_id_one_of", "datamodels/mapping-rules/prefix", "datamodels/mapping-rules/qualifier", "datamodels/mapping-rules/relationships", "datamodels/mapping-rules/replacement", "datamodels/mapping-rules/rules", "datamodels/mapping-rules/source", "datamodels/mapping-rules/subject_match_field_one_of", "datamodels/mapping-rules/subject_source_one_of", "datamodels/mapping-rules/synonymized", "datamodels/mapping-rules/synonymizer", "datamodels/mapping-rules/term", "datamodels/mapping-rules/tests", "datamodels/mapping-rules/transformations", "datamodels/mapping-rules/transformations_included_in", "datamodels/mapping-rules/type", "datamodels/mapping-rules/types", "datamodels/mapping-rules/weight", "datamodels/obograph/Axiom", "datamodels/obograph/BasicPropertyValue", "datamodels/obograph/Boolean", "datamodels/obograph/Curie", "datamodels/obograph/Date", "datamodels/obograph/DateOrDatetime", "datamodels/obograph/Datetime", "datamodels/obograph/Decimal", "datamodels/obograph/DefinitionPropertyValue", "datamodels/obograph/DisjointClassExpressionsAxiom", "datamodels/obograph/DomainRangeAxiom", "datamodels/obograph/Double", "datamodels/obograph/Edge", "datamodels/obograph/EquivalentNodesSet", "datamodels/obograph/ExistentialRestrictionExpression", "datamodels/obograph/Float", "datamodels/obograph/Graph", "datamodels/obograph/GraphDocument", "datamodels/obograph/Integer", "datamodels/obograph/Jsonpath", "datamodels/obograph/Jsonpointer", "datamodels/obograph/LogicalDefinitionAxiom", "datamodels/obograph/Meta", "datamodels/obograph/Ncname", "datamodels/obograph/Node", "datamodels/obograph/NodeTypeEnum", "datamodels/obograph/Nodeidentifier", "datamodels/obograph/Objectidentifier", "datamodels/obograph/OboIdentifierString", "datamodels/obograph/PredsEnum", "datamodels/obograph/PrefixDeclaration", "datamodels/obograph/PropertyChainAxiom", "datamodels/obograph/PropertyTypeEnum", "datamodels/obograph/PropertyValue", "datamodels/obograph/ScopeEnum", "datamodels/obograph/ScopesEnum", "datamodels/obograph/Sparqlpath", "datamodels/obograph/String", "datamodels/obograph/SubsetDefinition", "datamodels/obograph/SynonymPropertyValue", "datamodels/obograph/SynonymTypeDefinition", "datamodels/obograph/SynonymTypeIdentifierString", "datamodels/obograph/Time", "datamodels/obograph/Uri", "datamodels/obograph/Uriorcurie", "datamodels/obograph/XrefPropertyValue", "datamodels/obograph/XrefString", "datamodels/obograph/allValuesFromEdges", "datamodels/obograph/basicPropertyValues", "datamodels/obograph/chainPredicateIds", "datamodels/obograph/classExpressions", "datamodels/obograph/classIds", "datamodels/obograph/comments", "datamodels/obograph/definedClassId", "datamodels/obograph/definition", "datamodels/obograph/deprecated", "datamodels/obograph/disjointClassExpressionsAxioms", "datamodels/obograph/domainClassIds", "datamodels/obograph/domainRangeAxioms", "datamodels/obograph/edges", "datamodels/obograph/equivalentNodesSets", "datamodels/obograph/fillerId", "datamodels/obograph/genusIds", "datamodels/obograph/graphs", "datamodels/obograph/id", "datamodels/obograph/index", "datamodels/obograph/isExact", "datamodels/obograph/label", "datamodels/obograph/lang", "datamodels/obograph/lbl", "datamodels/obograph/logicalDefinitionAxioms", "datamodels/obograph/meta", "datamodels/obograph/namespace", "datamodels/obograph/nodeIds", "datamodels/obograph/nodes", "datamodels/obograph/obj", "datamodels/obograph/obographs_datamodel", "datamodels/obograph/obographs_linkml_model", "datamodels/obograph/pred", "datamodels/obograph/predicateId", "datamodels/obograph/prefix", "datamodels/obograph/prefixes", "datamodels/obograph/propertyChainAxioms", "datamodels/obograph/propertyId", "datamodels/obograph/propertyType", "datamodels/obograph/rangeClassIds", "datamodels/obograph/representativeNodeId", "datamodels/obograph/representitiveNodeId", "datamodels/obograph/restrictions", "datamodels/obograph/scope", "datamodels/obograph/sub", "datamodels/obograph/subsetDefinitions", "datamodels/obograph/subsets", "datamodels/obograph/synonymType", "datamodels/obograph/synonymTypeDefinitions", "datamodels/obograph/synonyms", "datamodels/obograph/type", "datamodels/obograph/types", "datamodels/obograph/unionEquivalentTo", "datamodels/obograph/unionEquivalentToExpression", "datamodels/obograph/val", "datamodels/obograph/valType", "datamodels/obograph/version", "datamodels/obograph/xrefs", "datamodels/ontology-metadata/Agent", "datamodels/ontology-metadata/AllotropePermittedProfile", "datamodels/ontology-metadata/AllotropeRequiredProfile", "datamodels/ontology-metadata/Annotation", "datamodels/ontology-metadata/AnnotationProperty", "datamodels/ontology-metadata/AnnotationPropertyMixin", "datamodels/ontology-metadata/Anonymous", "datamodels/ontology-metadata/AnonymousClassExpression", "datamodels/ontology-metadata/Any", "datamodels/ontology-metadata/Axiom", "datamodels/ontology-metadata/Boolean", "datamodels/ontology-metadata/CURIELiteral", "datamodels/ontology-metadata/Class", "datamodels/ontology-metadata/ClassExpression", "datamodels/ontology-metadata/Curie", "datamodels/ontology-metadata/Date", "datamodels/ontology-metadata/DateOrDatetime", "datamodels/ontology-metadata/Datetime", "datamodels/ontology-metadata/Decimal", "datamodels/ontology-metadata/DefinitionConstraintComponent", "datamodels/ontology-metadata/Double", "datamodels/ontology-metadata/Expression", "datamodels/ontology-metadata/Float", "datamodels/ontology-metadata/GoPermittedProfile", "datamodels/ontology-metadata/GoRecommendedProfile", "datamodels/ontology-metadata/GoRequiredProfile", "datamodels/ontology-metadata/HasCategory", "datamodels/ontology-metadata/HasLifeCycle", "datamodels/ontology-metadata/HasMappings", "datamodels/ontology-metadata/HasMinimalMetadata", "datamodels/ontology-metadata/HasProvenance", "datamodels/ontology-metadata/HasSynonyms", "datamodels/ontology-metadata/HasUserInformation", "datamodels/ontology-metadata/HomoSapiens", "datamodels/ontology-metadata/IEDB_alternative_term", "datamodels/ontology-metadata/ISA_alternative_term", "datamodels/ontology-metadata/Image", "datamodels/ontology-metadata/Integer", "datamodels/ontology-metadata/IriType", "datamodels/ontology-metadata/Jsonpath", "datamodels/ontology-metadata/Jsonpointer", "datamodels/ontology-metadata/LabelType", "datamodels/ontology-metadata/NCIT_definition_source", "datamodels/ontology-metadata/NCIT_term_source", "datamodels/ontology-metadata/NCIT_term_type", "datamodels/ontology-metadata/NamedIndividual", "datamodels/ontology-metadata/NamedObject", "datamodels/ontology-metadata/NarrativeText", "datamodels/ontology-metadata/Ncname", "datamodels/ontology-metadata/Nodeidentifier", "datamodels/ontology-metadata/NotObsoleteAspect", "datamodels/ontology-metadata/OBO_foundry_unique_label", "datamodels/ontology-metadata/ObiPermittedProfile", "datamodels/ontology-metadata/ObiRequiredProfile", "datamodels/ontology-metadata/ObjectProperty", "datamodels/ontology-metadata/Objectidentifier", "datamodels/ontology-metadata/ObsoleteAspect", "datamodels/ontology-metadata/Ontology", "datamodels/ontology-metadata/Ontology-Metadata", "datamodels/ontology-metadata/Property", "datamodels/ontology-metadata/PropertyExpression", "datamodels/ontology-metadata/Restriction", "datamodels/ontology-metadata/Sparqlpath", "datamodels/ontology-metadata/String", "datamodels/ontology-metadata/Subset", "datamodels/ontology-metadata/Term", "datamodels/ontology-metadata/Thing", "datamodels/ontology-metadata/TidyString", "datamodels/ontology-metadata/Time", "datamodels/ontology-metadata/TransitiveProperty", "datamodels/ontology-metadata/URLLiteral", "datamodels/ontology-metadata/Uri", "datamodels/ontology-metadata/Uriorcurie", "datamodels/ontology-metadata/allValuesFrom", "datamodels/ontology-metadata/alternative_term", "datamodels/ontology-metadata/annotatedProperty", "datamodels/ontology-metadata/annotatedSource", "datamodels/ontology-metadata/annotatedTarget", "datamodels/ontology-metadata/annotations", "datamodels/ontology-metadata/broadMatch", "datamodels/ontology-metadata/cardinality", "datamodels/ontology-metadata/category", "datamodels/ontology-metadata/changeNote", "datamodels/ontology-metadata/closeMatch", "datamodels/ontology-metadata/comment", "datamodels/ontology-metadata/complementOf", "datamodels/ontology-metadata/conformsTo", "datamodels/ontology-metadata/consider", "datamodels/ontology-metadata/contributor", "datamodels/ontology-metadata/core_property", "datamodels/ontology-metadata/created", "datamodels/ontology-metadata/created_by", "datamodels/ontology-metadata/creation_date", "datamodels/ontology-metadata/creator", "datamodels/ontology-metadata/curator_note", "datamodels/ontology-metadata/database_cross_reference", "datamodels/ontology-metadata/date", "datamodels/ontology-metadata/date_retrieved", "datamodels/ontology-metadata/defaultLanguage", "datamodels/ontology-metadata/definition", "datamodels/ontology-metadata/definition_source", "datamodels/ontology-metadata/depicted_by", "datamodels/ontology-metadata/deprecated", "datamodels/ontology-metadata/disconnected_from", "datamodels/ontology-metadata/disjointWith", "datamodels/ontology-metadata/distinctMembers", "datamodels/ontology-metadata/domain", "datamodels/ontology-metadata/editor_note", "datamodels/ontology-metadata/editor_preferred_term", "datamodels/ontology-metadata/equivalentClass", "datamodels/ontology-metadata/equivalentProperty", "datamodels/ontology-metadata/evidence", "datamodels/ontology-metadata/exactMatch", "datamodels/ontology-metadata/example_of_usage", "datamodels/ontology-metadata/excluded_axiom", "datamodels/ontology-metadata/excluded_from_QC_check", "datamodels/ontology-metadata/excluded_subClassOf", "datamodels/ontology-metadata/excluded_synonym", "datamodels/ontology-metadata/external_ontology", "datamodels/ontology-metadata/hasValue", "datamodels/ontology-metadata/has_alternative_id", "datamodels/ontology-metadata/has_axiom_label", "datamodels/ontology-metadata/has_broad_synonym", "datamodels/ontology-metadata/has_curation_status", "datamodels/ontology-metadata/has_exact_synonym", "datamodels/ontology-metadata/has_narrow_synonym", "datamodels/ontology-metadata/has_obo_namespace", "datamodels/ontology-metadata/has_obsolescence_reason", "datamodels/ontology-metadata/has_ontology_root_term", "datamodels/ontology-metadata/has_rank", "datamodels/ontology-metadata/has_related_synonym", "datamodels/ontology-metadata/has_synonym_type", "datamodels/ontology-metadata/id", "datamodels/ontology-metadata/image", "datamodels/ontology-metadata/imported_from", "datamodels/ontology-metadata/imports", "datamodels/ontology-metadata/in_subset", "datamodels/ontology-metadata/index", "datamodels/ontology-metadata/informative_property", "datamodels/ontology-metadata/intersectionOf", "datamodels/ontology-metadata/inverseOf", "datamodels/ontology-metadata/isDefinedBy", "datamodels/ontology-metadata/is_a_defining_property_chain_axiom", "datamodels/ontology-metadata/is_a_defining_property_chain_axiom_where_second_argument_is_reflexive", "datamodels/ontology-metadata/is_class_level", "datamodels/ontology-metadata/is_cyclic", "datamodels/ontology-metadata/is_inferred", "datamodels/ontology-metadata/is_metadata_tag", "datamodels/ontology-metadata/is_transitive", "datamodels/ontology-metadata/label", "datamodels/ontology-metadata/language", "datamodels/ontology-metadata/license", "datamodels/ontology-metadata/logical_predicate", "datamodels/ontology-metadata/match", "datamodels/ontology-metadata/match_aspect", "datamodels/ontology-metadata/maxQualifiedCardinality", "datamodels/ontology-metadata/members", "datamodels/ontology-metadata/minCardinality", "datamodels/ontology-metadata/minQualifiedCardinality", "datamodels/ontology-metadata/narrowMatch", "datamodels/ontology-metadata/never_in_taxon", "datamodels/ontology-metadata/notes", "datamodels/ontology-metadata/object", "datamodels/ontology-metadata/oboInOwl_id", "datamodels/ontology-metadata/oboInOwl_ontology", "datamodels/ontology-metadata/obsoletion_related_property", "datamodels/ontology-metadata/omo-schema", "datamodels/ontology-metadata/onClass", "datamodels/ontology-metadata/onProperty", "datamodels/ontology-metadata/oneOf", "datamodels/ontology-metadata/ontology_term_requester", "datamodels/ontology-metadata/page", "datamodels/ontology-metadata/predicate", "datamodels/ontology-metadata/propertyChainAxiom", "datamodels/ontology-metadata/provenance_property", "datamodels/ontology-metadata/qualifiedCardinality", "datamodels/ontology-metadata/range", "datamodels/ontology-metadata/reification_predicate", "datamodels/ontology-metadata/sameAs", "datamodels/ontology-metadata/seeAlso", "datamodels/ontology-metadata/shortcut_annotation_property", "datamodels/ontology-metadata/shorthand", "datamodels/ontology-metadata/should_conform_to", "datamodels/ontology-metadata/someValuesFrom", "datamodels/ontology-metadata/source", "datamodels/ontology-metadata/subClassOf", "datamodels/ontology-metadata/synonym", "datamodels/ontology-metadata/temporal_interpretation", "datamodels/ontology-metadata/term_editor", "datamodels/ontology-metadata/term_replaced_by", "datamodels/ontology-metadata/term_tracker_item", "datamodels/ontology-metadata/title", "datamodels/ontology-metadata/type", "datamodels/ontology-metadata/types", "datamodels/ontology-metadata/unionOf", "datamodels/ontology-metadata/url", "datamodels/ontology-metadata/versionIRI", "datamodels/ontology-metadata/versionInfo", "datamodels/ontology-metadata/version_property", "datamodels/search/Boolean", "datamodels/search/BooleanOperator", "datamodels/search/ComplexQuery", "datamodels/search/Curie", "datamodels/search/Date", "datamodels/search/DateOrDatetime", "datamodels/search/Datetime", "datamodels/search/Decimal", "datamodels/search/Double", "datamodels/search/Float", "datamodels/search/GraphFunction", "datamodels/search/Integer", "datamodels/search/Jsonpath", "datamodels/search/Jsonpointer", "datamodels/search/Ncname", "datamodels/search/Nodeidentifier", "datamodels/search/Objectidentifier", "datamodels/search/PathExpression", "datamodels/search/SearchBaseConfiguration", "datamodels/search/SearchProperty", "datamodels/search/SearchResult", "datamodels/search/SearchResultSet", "datamodels/search/SearchTerm", "datamodels/search/SearchTermSyntax", "datamodels/search/Sparqlpath", "datamodels/search/String", "datamodels/search/Time", "datamodels/search/Uri", "datamodels/search/Uriorcurie", "datamodels/search/all_of", "datamodels/search/any_of", "datamodels/search/atom", "datamodels/search/categories", "datamodels/search/configuration", "datamodels/search/cursor", "datamodels/search/force_case_insensitive", "datamodels/search/graph_predicates", "datamodels/search/include_aliases", "datamodels/search/include_definition", "datamodels/search/include_id", "datamodels/search/include_label", "datamodels/search/include_obsoletes_in_results", "datamodels/search/index", "datamodels/search/is_complete", "datamodels/search/is_fuzzy", "datamodels/search/is_partial", "datamodels/search/is_regular_expression", "datamodels/search/limit", "datamodels/search/matches_full_search_term", "datamodels/search/none_of", "datamodels/search/object_id", "datamodels/search/object_label", "datamodels/search/object_match_field", "datamodels/search/object_source", "datamodels/search/object_source_version", "datamodels/search/path_to", "datamodels/search/properties", "datamodels/search/rank", "datamodels/search/result_count", "datamodels/search/results", "datamodels/search/search-datamodel", "datamodels/search/search_term", "datamodels/search/search_terms", "datamodels/search/snippet", "datamodels/search/syntax", "datamodels/search/traversal", "datamodels/search/types", "datamodels/semsql/index", "datamodels/similarity/BestMatch", "datamodels/similarity/Boolean", "datamodels/similarity/Curie", "datamodels/similarity/Date", "datamodels/similarity/DateOrDatetime", "datamodels/similarity/Datetime", "datamodels/similarity/Decimal", "datamodels/similarity/Double", "datamodels/similarity/Float", "datamodels/similarity/Integer", "datamodels/similarity/ItemCount", "datamodels/similarity/Jsonpath", "datamodels/similarity/Jsonpointer", "datamodels/similarity/Ncname", "datamodels/similarity/NegativeLogValue", "datamodels/similarity/Nodeidentifier", "datamodels/similarity/NonNegativeFloat", "datamodels/similarity/Objectidentifier", "datamodels/similarity/PairwiseSimilarity", "datamodels/similarity/Sparqlpath", "datamodels/similarity/String", "datamodels/similarity/TermInfo", "datamodels/similarity/TermPairwiseSimilarity", "datamodels/similarity/TermSetPairwiseSimilarity", "datamodels/similarity/Time", "datamodels/similarity/Uri", "datamodels/similarity/Uriorcurie", "datamodels/similarity/ZeroToOne", "datamodels/similarity/ancestor_id", "datamodels/similarity/ancestor_information_content", "datamodels/similarity/ancestor_label", "datamodels/similarity/ancestor_source", "datamodels/similarity/average_score", "datamodels/similarity/best_score", "datamodels/similarity/cosine_similarity", "datamodels/similarity/dice_similarity", "datamodels/similarity/id", "datamodels/similarity/index", "datamodels/similarity/information_content", "datamodels/similarity/intersection_count", "datamodels/similarity/jaccard_similarity", "datamodels/similarity/label", "datamodels/similarity/match_source", "datamodels/similarity/match_source_label", "datamodels/similarity/match_subsumer", "datamodels/similarity/match_subsumer_label", "datamodels/similarity/match_target", "datamodels/similarity/match_target_label", "datamodels/similarity/metric", "datamodels/similarity/object_best_matches", "datamodels/similarity/object_id", "datamodels/similarity/object_information_content", "datamodels/similarity/object_label", "datamodels/similarity/object_source", "datamodels/similarity/object_termset", "datamodels/similarity/overlap_coefficient", "datamodels/similarity/phenodigm_score", "datamodels/similarity/score", "datamodels/similarity/similarity", "datamodels/similarity/subject_best_matches", "datamodels/similarity/subject_id", "datamodels/similarity/subject_information_content", "datamodels/similarity/subject_label", "datamodels/similarity/subject_source", "datamodels/similarity/subject_termset", "datamodels/similarity/subsumed_by_score", "datamodels/similarity/subsumes_score", "datamodels/similarity/types", "datamodels/similarity/union_count", "datamodels/sssom/index", "datamodels/summary-statistics/Agent", "datamodels/summary-statistics/Boolean", "datamodels/summary-statistics/ChangeTypeStatistic", "datamodels/summary-statistics/ContributorRole", "datamodels/summary-statistics/ContributorStatistics", "datamodels/summary-statistics/Curie", "datamodels/summary-statistics/Date", "datamodels/summary-statistics/DateOrDatetime", "datamodels/summary-statistics/Datetime", "datamodels/summary-statistics/Decimal", "datamodels/summary-statistics/Double", "datamodels/summary-statistics/FacetStatistics", "datamodels/summary-statistics/FacetedCount", "datamodels/summary-statistics/Float", "datamodels/summary-statistics/GlobalStatistics", "datamodels/summary-statistics/GroupedStatistics", "datamodels/summary-statistics/Integer", "datamodels/summary-statistics/Jsonpath", "datamodels/summary-statistics/Jsonpointer", "datamodels/summary-statistics/Ncname", "datamodels/summary-statistics/Nodeidentifier", "datamodels/summary-statistics/Objectidentifier", "datamodels/summary-statistics/Ontology", "datamodels/summary-statistics/Sparqlpath", "datamodels/summary-statistics/String", "datamodels/summary-statistics/SummaryStatisticCollection", "datamodels/summary-statistics/SummaryStatisticsCalculationActivity", "datamodels/summary-statistics/SummaryStatisticsReport", "datamodels/summary-statistics/Time", "datamodels/summary-statistics/UngroupedStatistics", "datamodels/summary-statistics/Uri", "datamodels/summary-statistics/Uriorcurie", "datamodels/summary-statistics/acted_on_behalf_of", "datamodels/summary-statistics/agents", "datamodels/summary-statistics/annotation_property_count", "datamodels/summary-statistics/anonymous_class_expression_count", "datamodels/summary-statistics/anonymous_individual_count", "datamodels/summary-statistics/by_category", "datamodels/summary-statistics/by_ontology", "datamodels/summary-statistics/by_subset", "datamodels/summary-statistics/by_taxon", "datamodels/summary-statistics/change_summary", "datamodels/summary-statistics/class_count", "datamodels/summary-statistics/class_count_by_category", "datamodels/summary-statistics/class_count_by_subset", "datamodels/summary-statistics/class_count_excluding_deprecated", "datamodels/summary-statistics/class_count_with_definitions", "datamodels/summary-statistics/class_count_with_text_definitions", "datamodels/summary-statistics/class_count_without_text_definitions", "datamodels/summary-statistics/class_statistic_group", "datamodels/summary-statistics/compared_with", "datamodels/summary-statistics/contributor_id", "datamodels/summary-statistics/contributor_name", "datamodels/summary-statistics/contributor_summary", "datamodels/summary-statistics/count_statistic", "datamodels/summary-statistics/datatype_property_count", "datamodels/summary-statistics/deprecated_class_count", "datamodels/summary-statistics/deprecated_object_property_count", "datamodels/summary-statistics/description", "datamodels/summary-statistics/description_logic_profile", "datamodels/summary-statistics/distinct_synonym_count", "datamodels/summary-statistics/edge_count_by_predicate", "datamodels/summary-statistics/ended_at_time", "datamodels/summary-statistics/entailed_edge_count_by_predicate", "datamodels/summary-statistics/equivalent_classes_axiom_count", "datamodels/summary-statistics/equivalentclasses_axiom_count", "datamodels/summary-statistics/facet", "datamodels/summary-statistics/filtered_count", "datamodels/summary-statistics/id", "datamodels/summary-statistics/index", "datamodels/summary-statistics/individual_count", "datamodels/summary-statistics/individual_statistic_group", "datamodels/summary-statistics/label", "datamodels/summary-statistics/mapping_count", "datamodels/summary-statistics/mapping_statement_count_by_object_source", "datamodels/summary-statistics/mapping_statement_count_by_predicate", "datamodels/summary-statistics/mapping_statement_count_subject_by_object_source", "datamodels/summary-statistics/merged_class_count", "datamodels/summary-statistics/metadata_statistic_group", "datamodels/summary-statistics/named_individual_count", "datamodels/summary-statistics/non_deprecated_class_count", "datamodels/summary-statistics/non_deprecated_object_property_count", "datamodels/summary-statistics/normalization_comments", "datamodels/summary-statistics/object_property_count", "datamodels/summary-statistics/ontologies", "datamodels/summary-statistics/ontology_count", "datamodels/summary-statistics/owl_axiom_count", "datamodels/summary-statistics/owl_statistic_group", "datamodels/summary-statistics/partitions", "datamodels/summary-statistics/prefix", "datamodels/summary-statistics/property_count", "datamodels/summary-statistics/property_statistic_group", "datamodels/summary-statistics/rdf_triple_count", "datamodels/summary-statistics/role_counts", "datamodels/summary-statistics/started_at_time", "datamodels/summary-statistics/subclass_of_axiom_count", "datamodels/summary-statistics/subset_count", "datamodels/summary-statistics/summary-statistics", "datamodels/summary-statistics/synonym_statement_count", "datamodels/summary-statistics/synonym_statement_count_by_predicate", "datamodels/summary-statistics/title", "datamodels/summary-statistics/types", "datamodels/summary-statistics/unsatisfiable_class_count", "datamodels/summary-statistics/untyped_entity_count", "datamodels/summary-statistics/version", "datamodels/summary-statistics/version_info", "datamodels/summary-statistics/was_associated_with", "datamodels/summary-statistics/was_generated_by", "datamodels/taxon-constraints/Boolean", "datamodels/taxon-constraints/ConfigurationOption", "datamodels/taxon-constraints/Curie", "datamodels/taxon-constraints/Date", "datamodels/taxon-constraints/DateOrDatetime", "datamodels/taxon-constraints/Datetime", "datamodels/taxon-constraints/Decimal", "datamodels/taxon-constraints/Double", "datamodels/taxon-constraints/Float", "datamodels/taxon-constraints/Integer", "datamodels/taxon-constraints/Jsonpath", "datamodels/taxon-constraints/Jsonpointer", "datamodels/taxon-constraints/Ncname", "datamodels/taxon-constraints/Nodeidentifier", "datamodels/taxon-constraints/Objectidentifier", "datamodels/taxon-constraints/PredicateTerm", "datamodels/taxon-constraints/Sparqlpath", "datamodels/taxon-constraints/String", "datamodels/taxon-constraints/SubjectTerm", "datamodels/taxon-constraints/Taxon", "datamodels/taxon-constraints/TaxonConstraint", "datamodels/taxon-constraints/Term", "datamodels/taxon-constraints/Time", "datamodels/taxon-constraints/Uri", "datamodels/taxon-constraints/Uriorcurie", "datamodels/taxon-constraints/asserted", "datamodels/taxon-constraints/candidate", "datamodels/taxon-constraints/comments", "datamodels/taxon-constraints/contradicted_by", "datamodels/taxon-constraints/description", "datamodels/taxon-constraints/evolutionary", "datamodels/taxon-constraints/id", "datamodels/taxon-constraints/index", "datamodels/taxon-constraints/label", "datamodels/taxon-constraints/never_in", "datamodels/taxon-constraints/only_in", "datamodels/taxon-constraints/predicate", "datamodels/taxon-constraints/predicates", "datamodels/taxon-constraints/present_in", "datamodels/taxon-constraints/present_in_ancestor_of", "datamodels/taxon-constraints/redundant", "datamodels/taxon-constraints/redundant_with", "datamodels/taxon-constraints/redundant_with_only_in", "datamodels/taxon-constraints/sources", "datamodels/taxon-constraints/subject", "datamodels/taxon-constraints/taxon", "datamodels/taxon-constraints/taxon-constraints", "datamodels/taxon-constraints/unsatisfiable", "datamodels/taxon-constraints/via_terms", "datamodels/text-annotator/Boolean", "datamodels/text-annotator/Curie", "datamodels/text-annotator/Date", "datamodels/text-annotator/DateOrDatetime", "datamodels/text-annotator/Datetime", "datamodels/text-annotator/Decimal", "datamodels/text-annotator/Double", "datamodels/text-annotator/Float", "datamodels/text-annotator/HasSpan", "datamodels/text-annotator/Integer", "datamodels/text-annotator/Jsonpath", "datamodels/text-annotator/Jsonpointer", "datamodels/text-annotator/Ncname", "datamodels/text-annotator/Nodeidentifier", "datamodels/text-annotator/Objectidentifier", "datamodels/text-annotator/Position", "datamodels/text-annotator/Sparqlpath", "datamodels/text-annotator/String", "datamodels/text-annotator/TextAnnotation", "datamodels/text-annotator/TextAnnotationConfiguration", "datamodels/text-annotator/TextAnnotationResultSet", "datamodels/text-annotator/TextualElement", "datamodels/text-annotator/Time", "datamodels/text-annotator/TransformationType", "datamodels/text-annotator/Uri", "datamodels/text-annotator/Uriorcurie", "datamodels/text-annotator/annotations", "datamodels/text-annotator/categories", "datamodels/text-annotator/confidence", "datamodels/text-annotator/id", "datamodels/text-annotator/include_aliases", "datamodels/text-annotator/index", "datamodels/text-annotator/info", "datamodels/text-annotator/is_longest_match", "datamodels/text-annotator/limit", "datamodels/text-annotator/match_string", "datamodels/text-annotator/match_type", "datamodels/text-annotator/matches_whole_text", "datamodels/text-annotator/model", "datamodels/text-annotator/object_aliases", "datamodels/text-annotator/object_categories", "datamodels/text-annotator/object_id", "datamodels/text-annotator/object_label", "datamodels/text-annotator/object_source", "datamodels/text-annotator/parent_document", "datamodels/text-annotator/predicate_id", "datamodels/text-annotator/source_text", "datamodels/text-annotator/sources", "datamodels/text-annotator/subject_end", "datamodels/text-annotator/subject_label", "datamodels/text-annotator/subject_source", "datamodels/text-annotator/subject_start", "datamodels/text-annotator/subject_text_id", "datamodels/text-annotator/text", "datamodels/text-annotator/text-annotator", "datamodels/text-annotator/token_exclusion_list", "datamodels/text-annotator/types", "datamodels/validation/Boolean", "datamodels/validation/ConstraintComponent", "datamodels/validation/Curie", "datamodels/validation/Date", "datamodels/validation/DateOrDatetime", "datamodels/validation/Datetime", "datamodels/validation/Decimal", "datamodels/validation/Double", "datamodels/validation/ExternalReferenceValidationResult", "datamodels/validation/Float", "datamodels/validation/Integer", "datamodels/validation/Jsonpath", "datamodels/validation/Jsonpointer", "datamodels/validation/MappingValidationResult", "datamodels/validation/NamedResource", "datamodels/validation/Ncname", "datamodels/validation/Node", "datamodels/validation/Nodeidentifier", "datamodels/validation/Objectidentifier", "datamodels/validation/RepairConfiguration", "datamodels/validation/RepairOperation", "datamodels/validation/RepairReport", "datamodels/validation/Report", "datamodels/validation/Result", "datamodels/validation/SeverityOptions", "datamodels/validation/Sparqlpath", "datamodels/validation/String", "datamodels/validation/Time", "datamodels/validation/TypeSeverityKeyValue", "datamodels/validation/Uri", "datamodels/validation/Uriorcurie", "datamodels/validation/ValidationConfiguration", "datamodels/validation/ValidationReport", "datamodels/validation/ValidationResult", "datamodels/validation/ValidationResultType", "datamodels/validation/category", "datamodels/validation/confidence", "datamodels/validation/dry_run", "datamodels/validation/http_response_code", "datamodels/validation/id", "datamodels/validation/index", "datamodels/validation/info", "datamodels/validation/instantiates", "datamodels/validation/max_number_results_per_type", "datamodels/validation/modified", "datamodels/validation/number_of_attempts", "datamodels/validation/object", "datamodels/validation/object_id", "datamodels/validation/object_info", "datamodels/validation/object_str", "datamodels/validation/predicate", "datamodels/validation/predicate_id", "datamodels/validation/problem", "datamodels/validation/prompt_info", "datamodels/validation/repairs", "datamodels/validation/results", "datamodels/validation/schema_path", "datamodels/validation/severity", "datamodels/validation/source", "datamodels/validation/subject", "datamodels/validation/subject_id", "datamodels/validation/subject_info", "datamodels/validation/successful", "datamodels/validation/suggested_modifications", "datamodels/validation/suggested_predicate", "datamodels/validation/time_checked", "datamodels/validation/type", "datamodels/validation/type_severity_map", "datamodels/validation/types", "datamodels/validation/url", "datamodels/validation/validation_configuration", "datamodels/validation/validaton-results", "faq/architecture", "faq/commandline", "faq/contributing", "faq/general", "faq/index", "faq/ontologies", "faq/troubleshooting", "glossary", "guide/aliases", "guide/associations", "guide/basics", "guide/curies-and-uris", "guide/index", "guide/learning-more", "guide/logical-definitions", "guide/mappings", "guide/obsoletion", "guide/primary-labels", "guide/relationships-and-graphs", "guide/similarity", "howtos/fhir-conversions", "howtos/index", "howtos/perform-lexical-matching", "howtos/roll-up-annotations-to-a-subset", "howtos/use-llms", "howtos/validate-an-obo-ontology", "howtos/visualize-ontology-subgraphs", "howtos/write-a-plugin", "index", "intro/index", "intro/tutorial01", "intro/tutorial02", "intro/tutorial03", "intro/tutorial04", "intro/tutorial05", "intro/tutorial06", "intro/tutorial07", "intro/tutorial08", "introduction", "logos/README", "notebooks", "packages/architecture", "packages/best-practice", "packages/converters/data-model-converter", "packages/converters/index", "packages/converters/obo-graph-to-cx", "packages/converters/obo-graph-to-fhir", "packages/converters/obo-graph-to-obo-format", "packages/converters/obo-graph-to-owl", "packages/implementations/aggregator", "packages/implementations/bioportal", "packages/implementations/funowl", "packages/implementations/gilda", "packages/implementations/index", "packages/implementations/llm", "packages/implementations/obograph", "packages/implementations/ols", "packages/implementations/ontobee", "packages/implementations/owlery", "packages/implementations/pantherdb", "packages/implementations/pronto", "packages/implementations/robot-template", "packages/implementations/simple_obo", "packages/implementations/sparql", "packages/implementations/sqldb", "packages/implementations/ubergraph", "packages/index", "packages/interfaces/association-provider", "packages/interfaces/basic", "packages/interfaces/class-enrichment", "packages/interfaces/differ", "packages/interfaces/dumper", "packages/interfaces/index", "packages/interfaces/mapping-provider", "packages/interfaces/obograph", "packages/interfaces/owl", "packages/interfaces/patcher", "packages/interfaces/relation-graph", "packages/interfaces/search", "packages/interfaces/semantic-similarity", "packages/interfaces/subsetting", "packages/interfaces/summary-statistics", "packages/interfaces/text-annotator", "packages/interfaces/validator", "packages/selectors", "packages/src/oaklib.utilities.apikey_manager", "packages/src/oaklib.utilities.graph.networkx_bridge", "packages/src/oaklib.utilities.graph.relationship_walker", "packages/src/oaklib.utilities.lexical.lexical_indexer", "packages/src/oaklib.utilities.obograph_utils", "packages/src/oaklib.utilities.subsets.slimmer_utils", "packages/src/oaklib.utilities.table_filler", "packages/src/oaklib.utilities.taxon", "packages/utilities", "rdf-owl-layering", "search-syntax"], "filenames": ["cli.rst", "concepts.rst", "contributing.md", "datamodels/association/Association.md", "datamodels/association/AssociationChange.md", "datamodels/association/Boolean.md", "datamodels/association/Curie.md", "datamodels/association/Date.md", "datamodels/association/DateOrDatetime.md", "datamodels/association/Datetime.md", "datamodels/association/Decimal.md", "datamodels/association/Double.md", "datamodels/association/Float.md", "datamodels/association/Integer.md", "datamodels/association/Jsonpath.md", "datamodels/association/Jsonpointer.md", "datamodels/association/Ncname.md", "datamodels/association/NegatedAssociation.md", "datamodels/association/Nodeidentifier.md", "datamodels/association/Objectidentifier.md", "datamodels/association/PairwiseCoAssociation.md", "datamodels/association/ParserConfiguration.md", "datamodels/association/PositiveOrNegativeAssociation.md", "datamodels/association/PropertyValue.md", "datamodels/association/RollupGroup.md", "datamodels/association/Sparqlpath.md", "datamodels/association/String.md", "datamodels/association/Time.md", "datamodels/association/Uri.md", "datamodels/association/Uriorcurie.md", "datamodels/association/aggregator_knowledge_source.md", "datamodels/association/association.md", "datamodels/association/associations.md", "datamodels/association/associations_for_subjects_in_common.md", "datamodels/association/closure_delta.md", "datamodels/association/closure_information_content_delta.md", "datamodels/association/closure_predicates.md", "datamodels/association/comments.md", "datamodels/association/core_triple.md", "datamodels/association/creation_date.md", "datamodels/association/date.md", "datamodels/association/denormalized_slot.md", "datamodels/association/diff_slot.md", "datamodels/association/evidence_type.md", "datamodels/association/group_object.md", "datamodels/association/include_association_attributes.md", "datamodels/association/index.md", "datamodels/association/is_creation.md", "datamodels/association/is_deletion.md", "datamodels/association/is_generalization.md", "datamodels/association/is_migration.md", "datamodels/association/is_specialization.md", "datamodels/association/modification_date.md", "datamodels/association/negated.md", "datamodels/association/new_date.md", "datamodels/association/new_object.md", "datamodels/association/new_predicate.md", "datamodels/association/number_subject_unique_to_entity1.md", "datamodels/association/number_subject_unique_to_entity2.md", "datamodels/association/number_subjects_in_common.md", "datamodels/association/number_subjects_in_union.md", "datamodels/association/object.md", "datamodels/association/object1.md", "datamodels/association/object1_label.md", "datamodels/association/object2.md", "datamodels/association/object2_label.md", "datamodels/association/object_closure.md", "datamodels/association/object_closure_label.md", "datamodels/association/object_label.md", "datamodels/association/old_date.md", "datamodels/association/old_object.md", "datamodels/association/old_object_obsolete.md", "datamodels/association/old_predicate.md", "datamodels/association/original_object.md", "datamodels/association/original_predicate.md", "datamodels/association/original_subject.md", "datamodels/association/predicate.md", "datamodels/association/predicate_label.md", "datamodels/association/preserve_negated_associations.md", "datamodels/association/primary_knowledge_source.md", "datamodels/association/property_values.md", "datamodels/association/proportion_subjects_in_common.md", "datamodels/association/publication_is_added.md", "datamodels/association/publication_is_deleted.md", "datamodels/association/publications.md", "datamodels/association/sub_groups.md", "datamodels/association/subject.md", "datamodels/association/subject_closure.md", "datamodels/association/subject_closure_label.md", "datamodels/association/subject_label.md", "datamodels/association/subjects_in_common.md", "datamodels/association/summary_group.md", "datamodels/association/supporting_objects.md", "datamodels/class-enrichment/Boolean.md", "datamodels/class-enrichment/ClassEnrichmentConfiguration.md", "datamodels/class-enrichment/ClassEnrichmentResult.md", "datamodels/class-enrichment/ClassEnrichmentResultSet.md", "datamodels/class-enrichment/Curie.md", "datamodels/class-enrichment/Date.md", "datamodels/class-enrichment/DateOrDatetime.md", "datamodels/class-enrichment/Datetime.md", "datamodels/class-enrichment/Decimal.md", "datamodels/class-enrichment/Double.md", "datamodels/class-enrichment/Float.md", "datamodels/class-enrichment/Integer.md", "datamodels/class-enrichment/Jsonpath.md", "datamodels/class-enrichment/Jsonpointer.md", "datamodels/class-enrichment/Ncname.md", "datamodels/class-enrichment/Nodeidentifier.md", "datamodels/class-enrichment/Objectidentifier.md", "datamodels/class-enrichment/Position.md", "datamodels/class-enrichment/SortFieldEnum.md", "datamodels/class-enrichment/Sparqlpath.md", "datamodels/class-enrichment/String.md", "datamodels/class-enrichment/Time.md", "datamodels/class-enrichment/Uri.md", "datamodels/class-enrichment/Uriorcurie.md", "datamodels/class-enrichment/ancestor_of_more_informative_result.md", "datamodels/class-enrichment/background_count.md", "datamodels/class-enrichment/background_total.md", "datamodels/class-enrichment/class-enrichment.md", "datamodels/class-enrichment/class_id.md", "datamodels/class-enrichment/class_label.md", "datamodels/class-enrichment/descendant_of_more_informative_result.md", "datamodels/class-enrichment/direction.md", "datamodels/class-enrichment/false_discovery_rate.md", "datamodels/class-enrichment/fold_enrichment.md", "datamodels/class-enrichment/index.md", "datamodels/class-enrichment/p_value.md", "datamodels/class-enrichment/p_value_adjusted.md", "datamodels/class-enrichment/p_value_cutoff.md", "datamodels/class-enrichment/probability.md", "datamodels/class-enrichment/rank.md", "datamodels/class-enrichment/results.md", "datamodels/class-enrichment/sample_count.md", "datamodels/class-enrichment/sample_total.md", "datamodels/cross-ontology-diff/Boolean.md", "datamodels/cross-ontology-diff/Curie.md", "datamodels/cross-ontology-diff/Date.md", "datamodels/cross-ontology-diff/DateOrDatetime.md", "datamodels/cross-ontology-diff/Datetime.md", "datamodels/cross-ontology-diff/Decimal.md", "datamodels/cross-ontology-diff/DiffCategory.md", "datamodels/cross-ontology-diff/Double.md", "datamodels/cross-ontology-diff/EntityReference.md", "datamodels/cross-ontology-diff/Float.md", "datamodels/cross-ontology-diff/Integer.md", "datamodels/cross-ontology-diff/Jsonpath.md", "datamodels/cross-ontology-diff/Jsonpointer.md", "datamodels/cross-ontology-diff/Label.md", "datamodels/cross-ontology-diff/MappingCardinalityEnum.md", "datamodels/cross-ontology-diff/Ncname.md", "datamodels/cross-ontology-diff/Nodeidentifier.md", "datamodels/cross-ontology-diff/Objectidentifier.md", "datamodels/cross-ontology-diff/Position.md", "datamodels/cross-ontology-diff/RelationalDiff.md", "datamodels/cross-ontology-diff/Source.md", "datamodels/cross-ontology-diff/Sparqlpath.md", "datamodels/cross-ontology-diff/String.md", "datamodels/cross-ontology-diff/StructureDiffResultSet.md", "datamodels/cross-ontology-diff/Time.md", "datamodels/cross-ontology-diff/Uri.md", "datamodels/cross-ontology-diff/Uriorcurie.md", "datamodels/cross-ontology-diff/category.md", "datamodels/cross-ontology-diff/cross-ontology-diff.md", "datamodels/cross-ontology-diff/index.md", "datamodels/cross-ontology-diff/is_functional.md", "datamodels/cross-ontology-diff/label.md", "datamodels/cross-ontology-diff/left_object_id.md", "datamodels/cross-ontology-diff/left_object_is_functional.md", "datamodels/cross-ontology-diff/left_object_label.md", "datamodels/cross-ontology-diff/left_object_name.md", "datamodels/cross-ontology-diff/left_predicate_id.md", "datamodels/cross-ontology-diff/left_predicate_label.md", "datamodels/cross-ontology-diff/left_predicate_name.md", "datamodels/cross-ontology-diff/left_side.md", "datamodels/cross-ontology-diff/left_source.md", "datamodels/cross-ontology-diff/left_subject_id.md", "datamodels/cross-ontology-diff/left_subject_is_functional.md", "datamodels/cross-ontology-diff/left_subject_label.md", "datamodels/cross-ontology-diff/left_subject_name.md", "datamodels/cross-ontology-diff/object.md", "datamodels/cross-ontology-diff/object_mapping_cardinality.md", "datamodels/cross-ontology-diff/object_mapping_predicate.md", "datamodels/cross-ontology-diff/predicate.md", "datamodels/cross-ontology-diff/results.md", "datamodels/cross-ontology-diff/right_intermediate_ids.md", "datamodels/cross-ontology-diff/right_object_id.md", "datamodels/cross-ontology-diff/right_object_label.md", "datamodels/cross-ontology-diff/right_object_name.md", "datamodels/cross-ontology-diff/right_predicate_ids.md", "datamodels/cross-ontology-diff/right_predicate_labels.md", "datamodels/cross-ontology-diff/right_predicate_names.md", "datamodels/cross-ontology-diff/right_side.md", "datamodels/cross-ontology-diff/right_source.md", "datamodels/cross-ontology-diff/right_subject_id.md", "datamodels/cross-ontology-diff/right_subject_label.md", "datamodels/cross-ontology-diff/right_subject_name.md", "datamodels/cross-ontology-diff/side.md", "datamodels/cross-ontology-diff/subject.md", "datamodels/cross-ontology-diff/subject_mapping_cardinality.md", "datamodels/cross-ontology-diff/subject_mapping_predicate.md", "datamodels/cross-ontology-diff/types.md", "datamodels/funowl/index.rst", "datamodels/index.rst", "datamodels/item-list/Boolean.md", "datamodels/item-list/Curie.md", "datamodels/item-list/Date.md", "datamodels/item-list/DateOrDatetime.md", "datamodels/item-list/Datetime.md", "datamodels/item-list/Decimal.md", "datamodels/item-list/Double.md", "datamodels/item-list/Float.md", "datamodels/item-list/Integer.md", "datamodels/item-list/ItemList.md", "datamodels/item-list/ItemListCollection.md", "datamodels/item-list/ItemListOrderType.md", "datamodels/item-list/Jsonpath.md", "datamodels/item-list/Jsonpointer.md", "datamodels/item-list/ListItem.md", "datamodels/item-list/Ncname.md", "datamodels/item-list/Nodeidentifier.md", "datamodels/item-list/Objectidentifier.md", "datamodels/item-list/Sparqlpath.md", "datamodels/item-list/String.md", "datamodels/item-list/Thing.md", "datamodels/item-list/Time.md", "datamodels/item-list/Uri.md", "datamodels/item-list/Uriorcurie.md", "datamodels/item-list/additionalType.md", "datamodels/item-list/categories.md", "datamodels/item-list/description.md", "datamodels/item-list/elementId.md", "datamodels/item-list/id.md", "datamodels/item-list/idType.md", "datamodels/item-list/identifiers.md", "datamodels/item-list/index.md", "datamodels/item-list/item.md", "datamodels/item-list/itemList.md", "datamodels/item-list/itemListElements.md", "datamodels/item-list/itemLists.md", "datamodels/item-list/itemMetadataMap.md", "datamodels/item-list/keywords.md", "datamodels/item-list/name.md", "datamodels/item-list/numberOfItems.md", "datamodels/item-list/position.md", "datamodels/item-list/previousItem.md", "datamodels/item-list/type.md", "datamodels/item-list/url.md", "datamodels/item-list/wasGeneratedBy.md", "datamodels/kgcl/index.rst", "datamodels/lexical-index/Activity.md", "datamodels/lexical-index/Any.md", "datamodels/lexical-index/Boolean.md", "datamodels/lexical-index/Curie.md", "datamodels/lexical-index/Date.md", "datamodels/lexical-index/DateOrDatetime.md", "datamodels/lexical-index/Datetime.md", "datamodels/lexical-index/Decimal.md", "datamodels/lexical-index/Double.md", "datamodels/lexical-index/Float.md", "datamodels/lexical-index/Integer.md", "datamodels/lexical-index/Jsonpath.md", "datamodels/lexical-index/Jsonpointer.md", "datamodels/lexical-index/LexicalGrouping.md", "datamodels/lexical-index/LexicalIndex.md", "datamodels/lexical-index/LexicalTransformation.md", "datamodels/lexical-index/LexicalTransformationPipeline.md", "datamodels/lexical-index/Ncname.md", "datamodels/lexical-index/Nodeidentifier.md", "datamodels/lexical-index/Objectidentifier.md", "datamodels/lexical-index/RelationshipToTerm.md", "datamodels/lexical-index/Sparqlpath.md", "datamodels/lexical-index/String.md", "datamodels/lexical-index/Time.md", "datamodels/lexical-index/TransformationType.md", "datamodels/lexical-index/Uri.md", "datamodels/lexical-index/Uriorcurie.md", "datamodels/lexical-index/element.md", "datamodels/lexical-index/element_term.md", "datamodels/lexical-index/groupings.md", "datamodels/lexical-index/index.md", "datamodels/lexical-index/lexical-index.md", "datamodels/lexical-index/lexican-index.md", "datamodels/lexical-index/name.md", "datamodels/lexical-index/params.md", "datamodels/lexical-index/pipeline.md", "datamodels/lexical-index/pipelines.md", "datamodels/lexical-index/predicate.md", "datamodels/lexical-index/relationships.md", "datamodels/lexical-index/source.md", "datamodels/lexical-index/synonymized.md", "datamodels/lexical-index/term.md", "datamodels/lexical-index/transformations.md", "datamodels/lexical-index/type.md", "datamodels/lexical-index/types.md", "datamodels/mapping-rules/Activity.md", "datamodels/mapping-rules/Any.md", "datamodels/mapping-rules/Boolean.md", "datamodels/mapping-rules/Curie.md", "datamodels/mapping-rules/Date.md", "datamodels/mapping-rules/DateOrDatetime.md", "datamodels/mapping-rules/Datetime.md", "datamodels/mapping-rules/Decimal.md", "datamodels/mapping-rules/Double.md", "datamodels/mapping-rules/Float.md", "datamodels/mapping-rules/Integer.md", "datamodels/mapping-rules/Jsonpath.md", "datamodels/mapping-rules/Jsonpointer.md", "datamodels/mapping-rules/LexicalGrouping.md", "datamodels/mapping-rules/LexicalIndex.md", "datamodels/mapping-rules/LexicalTransformation.md", "datamodels/mapping-rules/LexicalTransformationPipeline.md", "datamodels/mapping-rules/MappingRule.md", "datamodels/mapping-rules/MappingRuleCollection.md", "datamodels/mapping-rules/Ncname.md", "datamodels/mapping-rules/Nodeidentifier.md", "datamodels/mapping-rules/Objectidentifier.md", "datamodels/mapping-rules/Postcondition.md", "datamodels/mapping-rules/Precondition.md", "datamodels/mapping-rules/RegularExpressionString.md", "datamodels/mapping-rules/RelationshipToTerm.md", "datamodels/mapping-rules/RuleSet.md", "datamodels/mapping-rules/Sparqlpath.md", "datamodels/mapping-rules/String.md", "datamodels/mapping-rules/Synonymizer.md", "datamodels/mapping-rules/Test.md", "datamodels/mapping-rules/Time.md", "datamodels/mapping-rules/TransformationType.md", "datamodels/mapping-rules/Uri.md", "datamodels/mapping-rules/Uriorcurie.md", "datamodels/mapping-rules/description.md", "datamodels/mapping-rules/element.md", "datamodels/mapping-rules/element_term.md", "datamodels/mapping-rules/groupings.md", "datamodels/mapping-rules/index.md", "datamodels/mapping-rules/input.md", "datamodels/mapping-rules/lexical-index.md", "datamodels/mapping-rules/lexican-index.md", "datamodels/mapping-rules/mapping-rules.md", "datamodels/mapping-rules/mapping-rules-datamodel.md", "datamodels/mapping-rules/mapping_source_one_of.md", "datamodels/mapping-rules/match.md", "datamodels/mapping-rules/match_scope.md", "datamodels/mapping-rules/minimum_confidence.md", "datamodels/mapping-rules/name.md", "datamodels/mapping-rules/object_match_field_one_of.md", "datamodels/mapping-rules/object_source_one_of.md", "datamodels/mapping-rules/oneway.md", "datamodels/mapping-rules/output.md", "datamodels/mapping-rules/params.md", "datamodels/mapping-rules/pipeline.md", "datamodels/mapping-rules/pipelines.md", "datamodels/mapping-rules/postconditions.md", "datamodels/mapping-rules/preconditions.md", "datamodels/mapping-rules/predicate.md", "datamodels/mapping-rules/predicate_id.md", "datamodels/mapping-rules/predicate_id_one_of.md", "datamodels/mapping-rules/prefix.md", "datamodels/mapping-rules/qualifier.md", "datamodels/mapping-rules/relationships.md", "datamodels/mapping-rules/replacement.md", "datamodels/mapping-rules/rules.md", "datamodels/mapping-rules/source.md", "datamodels/mapping-rules/subject_match_field_one_of.md", "datamodels/mapping-rules/subject_source_one_of.md", "datamodels/mapping-rules/synonymized.md", "datamodels/mapping-rules/synonymizer.md", "datamodels/mapping-rules/term.md", "datamodels/mapping-rules/tests.md", "datamodels/mapping-rules/transformations.md", "datamodels/mapping-rules/transformations_included_in.md", "datamodels/mapping-rules/type.md", "datamodels/mapping-rules/types.md", "datamodels/mapping-rules/weight.md", "datamodels/obograph/Axiom.md", "datamodels/obograph/BasicPropertyValue.md", "datamodels/obograph/Boolean.md", "datamodels/obograph/Curie.md", "datamodels/obograph/Date.md", "datamodels/obograph/DateOrDatetime.md", "datamodels/obograph/Datetime.md", "datamodels/obograph/Decimal.md", "datamodels/obograph/DefinitionPropertyValue.md", "datamodels/obograph/DisjointClassExpressionsAxiom.md", "datamodels/obograph/DomainRangeAxiom.md", "datamodels/obograph/Double.md", "datamodels/obograph/Edge.md", "datamodels/obograph/EquivalentNodesSet.md", "datamodels/obograph/ExistentialRestrictionExpression.md", "datamodels/obograph/Float.md", "datamodels/obograph/Graph.md", "datamodels/obograph/GraphDocument.md", "datamodels/obograph/Integer.md", "datamodels/obograph/Jsonpath.md", "datamodels/obograph/Jsonpointer.md", "datamodels/obograph/LogicalDefinitionAxiom.md", "datamodels/obograph/Meta.md", "datamodels/obograph/Ncname.md", "datamodels/obograph/Node.md", "datamodels/obograph/NodeTypeEnum.md", "datamodels/obograph/Nodeidentifier.md", "datamodels/obograph/Objectidentifier.md", "datamodels/obograph/OboIdentifierString.md", "datamodels/obograph/PredsEnum.md", "datamodels/obograph/PrefixDeclaration.md", "datamodels/obograph/PropertyChainAxiom.md", "datamodels/obograph/PropertyTypeEnum.md", "datamodels/obograph/PropertyValue.md", "datamodels/obograph/ScopeEnum.md", "datamodels/obograph/ScopesEnum.md", "datamodels/obograph/Sparqlpath.md", "datamodels/obograph/String.md", "datamodels/obograph/SubsetDefinition.md", "datamodels/obograph/SynonymPropertyValue.md", "datamodels/obograph/SynonymTypeDefinition.md", "datamodels/obograph/SynonymTypeIdentifierString.md", "datamodels/obograph/Time.md", "datamodels/obograph/Uri.md", "datamodels/obograph/Uriorcurie.md", "datamodels/obograph/XrefPropertyValue.md", "datamodels/obograph/XrefString.md", "datamodels/obograph/allValuesFromEdges.md", "datamodels/obograph/basicPropertyValues.md", "datamodels/obograph/chainPredicateIds.md", "datamodels/obograph/classExpressions.md", "datamodels/obograph/classIds.md", "datamodels/obograph/comments.md", "datamodels/obograph/definedClassId.md", "datamodels/obograph/definition.md", "datamodels/obograph/deprecated.md", "datamodels/obograph/disjointClassExpressionsAxioms.md", "datamodels/obograph/domainClassIds.md", "datamodels/obograph/domainRangeAxioms.md", "datamodels/obograph/edges.md", "datamodels/obograph/equivalentNodesSets.md", "datamodels/obograph/fillerId.md", "datamodels/obograph/genusIds.md", "datamodels/obograph/graphs.md", "datamodels/obograph/id.md", "datamodels/obograph/index.md", "datamodels/obograph/isExact.md", "datamodels/obograph/label.md", "datamodels/obograph/lang.md", "datamodels/obograph/lbl.md", "datamodels/obograph/logicalDefinitionAxioms.md", "datamodels/obograph/meta.md", "datamodels/obograph/namespace.md", "datamodels/obograph/nodeIds.md", "datamodels/obograph/nodes.md", "datamodels/obograph/obj.md", "datamodels/obograph/obographs_datamodel.md", "datamodels/obograph/obographs_linkml_model.md", "datamodels/obograph/pred.md", "datamodels/obograph/predicateId.md", "datamodels/obograph/prefix.md", "datamodels/obograph/prefixes.md", "datamodels/obograph/propertyChainAxioms.md", "datamodels/obograph/propertyId.md", "datamodels/obograph/propertyType.md", "datamodels/obograph/rangeClassIds.md", "datamodels/obograph/representativeNodeId.md", "datamodels/obograph/representitiveNodeId.md", "datamodels/obograph/restrictions.md", "datamodels/obograph/scope.md", "datamodels/obograph/sub.md", "datamodels/obograph/subsetDefinitions.md", "datamodels/obograph/subsets.md", "datamodels/obograph/synonymType.md", "datamodels/obograph/synonymTypeDefinitions.md", "datamodels/obograph/synonyms.md", "datamodels/obograph/type.md", "datamodels/obograph/types.md", "datamodels/obograph/unionEquivalentTo.md", "datamodels/obograph/unionEquivalentToExpression.md", "datamodels/obograph/val.md", "datamodels/obograph/valType.md", "datamodels/obograph/version.md", "datamodels/obograph/xrefs.md", "datamodels/ontology-metadata/Agent.md", "datamodels/ontology-metadata/AllotropePermittedProfile.md", "datamodels/ontology-metadata/AllotropeRequiredProfile.md", "datamodels/ontology-metadata/Annotation.md", "datamodels/ontology-metadata/AnnotationProperty.md", "datamodels/ontology-metadata/AnnotationPropertyMixin.md", "datamodels/ontology-metadata/Anonymous.md", "datamodels/ontology-metadata/AnonymousClassExpression.md", "datamodels/ontology-metadata/Any.md", "datamodels/ontology-metadata/Axiom.md", "datamodels/ontology-metadata/Boolean.md", "datamodels/ontology-metadata/CURIELiteral.md", "datamodels/ontology-metadata/Class.md", "datamodels/ontology-metadata/ClassExpression.md", "datamodels/ontology-metadata/Curie.md", "datamodels/ontology-metadata/Date.md", "datamodels/ontology-metadata/DateOrDatetime.md", "datamodels/ontology-metadata/Datetime.md", "datamodels/ontology-metadata/Decimal.md", "datamodels/ontology-metadata/DefinitionConstraintComponent.md", "datamodels/ontology-metadata/Double.md", "datamodels/ontology-metadata/Expression.md", "datamodels/ontology-metadata/Float.md", "datamodels/ontology-metadata/GoPermittedProfile.md", "datamodels/ontology-metadata/GoRecommendedProfile.md", "datamodels/ontology-metadata/GoRequiredProfile.md", "datamodels/ontology-metadata/HasCategory.md", "datamodels/ontology-metadata/HasLifeCycle.md", "datamodels/ontology-metadata/HasMappings.md", "datamodels/ontology-metadata/HasMinimalMetadata.md", "datamodels/ontology-metadata/HasProvenance.md", "datamodels/ontology-metadata/HasSynonyms.md", "datamodels/ontology-metadata/HasUserInformation.md", "datamodels/ontology-metadata/HomoSapiens.md", "datamodels/ontology-metadata/IEDB_alternative_term.md", "datamodels/ontology-metadata/ISA_alternative_term.md", "datamodels/ontology-metadata/Image.md", "datamodels/ontology-metadata/Integer.md", "datamodels/ontology-metadata/IriType.md", "datamodels/ontology-metadata/Jsonpath.md", "datamodels/ontology-metadata/Jsonpointer.md", "datamodels/ontology-metadata/LabelType.md", "datamodels/ontology-metadata/NCIT_definition_source.md", "datamodels/ontology-metadata/NCIT_term_source.md", "datamodels/ontology-metadata/NCIT_term_type.md", "datamodels/ontology-metadata/NamedIndividual.md", "datamodels/ontology-metadata/NamedObject.md", "datamodels/ontology-metadata/NarrativeText.md", "datamodels/ontology-metadata/Ncname.md", "datamodels/ontology-metadata/Nodeidentifier.md", "datamodels/ontology-metadata/NotObsoleteAspect.md", "datamodels/ontology-metadata/OBO_foundry_unique_label.md", "datamodels/ontology-metadata/ObiPermittedProfile.md", "datamodels/ontology-metadata/ObiRequiredProfile.md", "datamodels/ontology-metadata/ObjectProperty.md", "datamodels/ontology-metadata/Objectidentifier.md", "datamodels/ontology-metadata/ObsoleteAspect.md", "datamodels/ontology-metadata/Ontology.md", "datamodels/ontology-metadata/Ontology-Metadata.md", "datamodels/ontology-metadata/Property.md", "datamodels/ontology-metadata/PropertyExpression.md", "datamodels/ontology-metadata/Restriction.md", "datamodels/ontology-metadata/Sparqlpath.md", "datamodels/ontology-metadata/String.md", "datamodels/ontology-metadata/Subset.md", "datamodels/ontology-metadata/Term.md", "datamodels/ontology-metadata/Thing.md", "datamodels/ontology-metadata/TidyString.md", "datamodels/ontology-metadata/Time.md", "datamodels/ontology-metadata/TransitiveProperty.md", "datamodels/ontology-metadata/URLLiteral.md", "datamodels/ontology-metadata/Uri.md", "datamodels/ontology-metadata/Uriorcurie.md", "datamodels/ontology-metadata/allValuesFrom.md", "datamodels/ontology-metadata/alternative_term.md", "datamodels/ontology-metadata/annotatedProperty.md", "datamodels/ontology-metadata/annotatedSource.md", "datamodels/ontology-metadata/annotatedTarget.md", "datamodels/ontology-metadata/annotations.md", "datamodels/ontology-metadata/broadMatch.md", "datamodels/ontology-metadata/cardinality.md", "datamodels/ontology-metadata/category.md", "datamodels/ontology-metadata/changeNote.md", "datamodels/ontology-metadata/closeMatch.md", "datamodels/ontology-metadata/comment.md", "datamodels/ontology-metadata/complementOf.md", "datamodels/ontology-metadata/conformsTo.md", "datamodels/ontology-metadata/consider.md", "datamodels/ontology-metadata/contributor.md", "datamodels/ontology-metadata/core_property.md", "datamodels/ontology-metadata/created.md", "datamodels/ontology-metadata/created_by.md", "datamodels/ontology-metadata/creation_date.md", "datamodels/ontology-metadata/creator.md", "datamodels/ontology-metadata/curator_note.md", "datamodels/ontology-metadata/database_cross_reference.md", "datamodels/ontology-metadata/date.md", "datamodels/ontology-metadata/date_retrieved.md", "datamodels/ontology-metadata/defaultLanguage.md", "datamodels/ontology-metadata/definition.md", "datamodels/ontology-metadata/definition_source.md", "datamodels/ontology-metadata/depicted_by.md", "datamodels/ontology-metadata/deprecated.md", "datamodels/ontology-metadata/disconnected_from.md", "datamodels/ontology-metadata/disjointWith.md", "datamodels/ontology-metadata/distinctMembers.md", "datamodels/ontology-metadata/domain.md", "datamodels/ontology-metadata/editor_note.md", "datamodels/ontology-metadata/editor_preferred_term.md", "datamodels/ontology-metadata/equivalentClass.md", "datamodels/ontology-metadata/equivalentProperty.md", "datamodels/ontology-metadata/evidence.md", "datamodels/ontology-metadata/exactMatch.md", "datamodels/ontology-metadata/example_of_usage.md", "datamodels/ontology-metadata/excluded_axiom.md", "datamodels/ontology-metadata/excluded_from_QC_check.md", "datamodels/ontology-metadata/excluded_subClassOf.md", "datamodels/ontology-metadata/excluded_synonym.md", "datamodels/ontology-metadata/external_ontology.md", "datamodels/ontology-metadata/hasValue.md", "datamodels/ontology-metadata/has_alternative_id.md", "datamodels/ontology-metadata/has_axiom_label.md", "datamodels/ontology-metadata/has_broad_synonym.md", "datamodels/ontology-metadata/has_curation_status.md", "datamodels/ontology-metadata/has_exact_synonym.md", "datamodels/ontology-metadata/has_narrow_synonym.md", "datamodels/ontology-metadata/has_obo_namespace.md", "datamodels/ontology-metadata/has_obsolescence_reason.md", "datamodels/ontology-metadata/has_ontology_root_term.md", "datamodels/ontology-metadata/has_rank.md", "datamodels/ontology-metadata/has_related_synonym.md", "datamodels/ontology-metadata/has_synonym_type.md", "datamodels/ontology-metadata/id.md", "datamodels/ontology-metadata/image.md", "datamodels/ontology-metadata/imported_from.md", "datamodels/ontology-metadata/imports.md", "datamodels/ontology-metadata/in_subset.md", "datamodels/ontology-metadata/index.md", "datamodels/ontology-metadata/informative_property.md", "datamodels/ontology-metadata/intersectionOf.md", "datamodels/ontology-metadata/inverseOf.md", "datamodels/ontology-metadata/isDefinedBy.md", "datamodels/ontology-metadata/is_a_defining_property_chain_axiom.md", "datamodels/ontology-metadata/is_a_defining_property_chain_axiom_where_second_argument_is_reflexive.md", "datamodels/ontology-metadata/is_class_level.md", "datamodels/ontology-metadata/is_cyclic.md", "datamodels/ontology-metadata/is_inferred.md", "datamodels/ontology-metadata/is_metadata_tag.md", "datamodels/ontology-metadata/is_transitive.md", "datamodels/ontology-metadata/label.md", "datamodels/ontology-metadata/language.md", "datamodels/ontology-metadata/license.md", "datamodels/ontology-metadata/logical_predicate.md", "datamodels/ontology-metadata/match.md", "datamodels/ontology-metadata/match_aspect.md", "datamodels/ontology-metadata/maxQualifiedCardinality.md", "datamodels/ontology-metadata/members.md", "datamodels/ontology-metadata/minCardinality.md", "datamodels/ontology-metadata/minQualifiedCardinality.md", "datamodels/ontology-metadata/narrowMatch.md", "datamodels/ontology-metadata/never_in_taxon.md", "datamodels/ontology-metadata/notes.md", "datamodels/ontology-metadata/object.md", "datamodels/ontology-metadata/oboInOwl_id.md", "datamodels/ontology-metadata/oboInOwl_ontology.md", "datamodels/ontology-metadata/obsoletion_related_property.md", "datamodels/ontology-metadata/omo-schema.md", "datamodels/ontology-metadata/onClass.md", "datamodels/ontology-metadata/onProperty.md", "datamodels/ontology-metadata/oneOf.md", "datamodels/ontology-metadata/ontology_term_requester.md", "datamodels/ontology-metadata/page.md", "datamodels/ontology-metadata/predicate.md", "datamodels/ontology-metadata/propertyChainAxiom.md", "datamodels/ontology-metadata/provenance_property.md", "datamodels/ontology-metadata/qualifiedCardinality.md", "datamodels/ontology-metadata/range.md", "datamodels/ontology-metadata/reification_predicate.md", "datamodels/ontology-metadata/sameAs.md", "datamodels/ontology-metadata/seeAlso.md", "datamodels/ontology-metadata/shortcut_annotation_property.md", "datamodels/ontology-metadata/shorthand.md", "datamodels/ontology-metadata/should_conform_to.md", "datamodels/ontology-metadata/someValuesFrom.md", "datamodels/ontology-metadata/source.md", "datamodels/ontology-metadata/subClassOf.md", "datamodels/ontology-metadata/synonym.md", "datamodels/ontology-metadata/temporal_interpretation.md", "datamodels/ontology-metadata/term_editor.md", "datamodels/ontology-metadata/term_replaced_by.md", "datamodels/ontology-metadata/term_tracker_item.md", "datamodels/ontology-metadata/title.md", "datamodels/ontology-metadata/type.md", "datamodels/ontology-metadata/types.md", "datamodels/ontology-metadata/unionOf.md", "datamodels/ontology-metadata/url.md", "datamodels/ontology-metadata/versionIRI.md", "datamodels/ontology-metadata/versionInfo.md", "datamodels/ontology-metadata/version_property.md", "datamodels/search/Boolean.md", "datamodels/search/BooleanOperator.md", "datamodels/search/ComplexQuery.md", "datamodels/search/Curie.md", "datamodels/search/Date.md", "datamodels/search/DateOrDatetime.md", "datamodels/search/Datetime.md", "datamodels/search/Decimal.md", "datamodels/search/Double.md", "datamodels/search/Float.md", "datamodels/search/GraphFunction.md", "datamodels/search/Integer.md", "datamodels/search/Jsonpath.md", "datamodels/search/Jsonpointer.md", "datamodels/search/Ncname.md", "datamodels/search/Nodeidentifier.md", "datamodels/search/Objectidentifier.md", "datamodels/search/PathExpression.md", "datamodels/search/SearchBaseConfiguration.md", "datamodels/search/SearchProperty.md", "datamodels/search/SearchResult.md", "datamodels/search/SearchResultSet.md", "datamodels/search/SearchTerm.md", "datamodels/search/SearchTermSyntax.md", "datamodels/search/Sparqlpath.md", "datamodels/search/String.md", "datamodels/search/Time.md", "datamodels/search/Uri.md", "datamodels/search/Uriorcurie.md", "datamodels/search/all_of.md", "datamodels/search/any_of.md", "datamodels/search/atom.md", "datamodels/search/categories.md", "datamodels/search/configuration.md", "datamodels/search/cursor.md", "datamodels/search/force_case_insensitive.md", "datamodels/search/graph_predicates.md", "datamodels/search/include_aliases.md", "datamodels/search/include_definition.md", "datamodels/search/include_id.md", "datamodels/search/include_label.md", "datamodels/search/include_obsoletes_in_results.md", "datamodels/search/index.md", "datamodels/search/is_complete.md", "datamodels/search/is_fuzzy.md", "datamodels/search/is_partial.md", "datamodels/search/is_regular_expression.md", "datamodels/search/limit.md", "datamodels/search/matches_full_search_term.md", "datamodels/search/none_of.md", "datamodels/search/object_id.md", "datamodels/search/object_label.md", "datamodels/search/object_match_field.md", "datamodels/search/object_source.md", "datamodels/search/object_source_version.md", "datamodels/search/path_to.md", "datamodels/search/properties.md", "datamodels/search/rank.md", "datamodels/search/result_count.md", "datamodels/search/results.md", "datamodels/search/search-datamodel.md", "datamodels/search/search_term.md", "datamodels/search/search_terms.md", "datamodels/search/snippet.md", "datamodels/search/syntax.md", "datamodels/search/traversal.md", "datamodels/search/types.md", "datamodels/semsql/index.rst", "datamodels/similarity/BestMatch.md", "datamodels/similarity/Boolean.md", "datamodels/similarity/Curie.md", "datamodels/similarity/Date.md", "datamodels/similarity/DateOrDatetime.md", "datamodels/similarity/Datetime.md", "datamodels/similarity/Decimal.md", "datamodels/similarity/Double.md", "datamodels/similarity/Float.md", "datamodels/similarity/Integer.md", "datamodels/similarity/ItemCount.md", "datamodels/similarity/Jsonpath.md", "datamodels/similarity/Jsonpointer.md", "datamodels/similarity/Ncname.md", "datamodels/similarity/NegativeLogValue.md", "datamodels/similarity/Nodeidentifier.md", "datamodels/similarity/NonNegativeFloat.md", "datamodels/similarity/Objectidentifier.md", "datamodels/similarity/PairwiseSimilarity.md", "datamodels/similarity/Sparqlpath.md", "datamodels/similarity/String.md", "datamodels/similarity/TermInfo.md", "datamodels/similarity/TermPairwiseSimilarity.md", "datamodels/similarity/TermSetPairwiseSimilarity.md", "datamodels/similarity/Time.md", "datamodels/similarity/Uri.md", "datamodels/similarity/Uriorcurie.md", "datamodels/similarity/ZeroToOne.md", "datamodels/similarity/ancestor_id.md", "datamodels/similarity/ancestor_information_content.md", "datamodels/similarity/ancestor_label.md", "datamodels/similarity/ancestor_source.md", "datamodels/similarity/average_score.md", "datamodels/similarity/best_score.md", "datamodels/similarity/cosine_similarity.md", "datamodels/similarity/dice_similarity.md", "datamodels/similarity/id.md", "datamodels/similarity/index.md", "datamodels/similarity/information_content.md", "datamodels/similarity/intersection_count.md", "datamodels/similarity/jaccard_similarity.md", "datamodels/similarity/label.md", "datamodels/similarity/match_source.md", "datamodels/similarity/match_source_label.md", "datamodels/similarity/match_subsumer.md", "datamodels/similarity/match_subsumer_label.md", "datamodels/similarity/match_target.md", "datamodels/similarity/match_target_label.md", "datamodels/similarity/metric.md", "datamodels/similarity/object_best_matches.md", "datamodels/similarity/object_id.md", "datamodels/similarity/object_information_content.md", "datamodels/similarity/object_label.md", "datamodels/similarity/object_source.md", "datamodels/similarity/object_termset.md", "datamodels/similarity/overlap_coefficient.md", "datamodels/similarity/phenodigm_score.md", "datamodels/similarity/score.md", "datamodels/similarity/similarity.md", "datamodels/similarity/subject_best_matches.md", "datamodels/similarity/subject_id.md", "datamodels/similarity/subject_information_content.md", "datamodels/similarity/subject_label.md", "datamodels/similarity/subject_source.md", "datamodels/similarity/subject_termset.md", "datamodels/similarity/subsumed_by_score.md", "datamodels/similarity/subsumes_score.md", "datamodels/similarity/types.md", "datamodels/similarity/union_count.md", "datamodels/sssom/index.rst", "datamodels/summary-statistics/Agent.md", "datamodels/summary-statistics/Boolean.md", "datamodels/summary-statistics/ChangeTypeStatistic.md", "datamodels/summary-statistics/ContributorRole.md", "datamodels/summary-statistics/ContributorStatistics.md", "datamodels/summary-statistics/Curie.md", "datamodels/summary-statistics/Date.md", "datamodels/summary-statistics/DateOrDatetime.md", "datamodels/summary-statistics/Datetime.md", "datamodels/summary-statistics/Decimal.md", "datamodels/summary-statistics/Double.md", "datamodels/summary-statistics/FacetStatistics.md", "datamodels/summary-statistics/FacetedCount.md", "datamodels/summary-statistics/Float.md", "datamodels/summary-statistics/GlobalStatistics.md", "datamodels/summary-statistics/GroupedStatistics.md", "datamodels/summary-statistics/Integer.md", "datamodels/summary-statistics/Jsonpath.md", "datamodels/summary-statistics/Jsonpointer.md", "datamodels/summary-statistics/Ncname.md", "datamodels/summary-statistics/Nodeidentifier.md", "datamodels/summary-statistics/Objectidentifier.md", "datamodels/summary-statistics/Ontology.md", "datamodels/summary-statistics/Sparqlpath.md", "datamodels/summary-statistics/String.md", "datamodels/summary-statistics/SummaryStatisticCollection.md", "datamodels/summary-statistics/SummaryStatisticsCalculationActivity.md", "datamodels/summary-statistics/SummaryStatisticsReport.md", "datamodels/summary-statistics/Time.md", "datamodels/summary-statistics/UngroupedStatistics.md", "datamodels/summary-statistics/Uri.md", "datamodels/summary-statistics/Uriorcurie.md", "datamodels/summary-statistics/acted_on_behalf_of.md", "datamodels/summary-statistics/agents.md", "datamodels/summary-statistics/annotation_property_count.md", "datamodels/summary-statistics/anonymous_class_expression_count.md", "datamodels/summary-statistics/anonymous_individual_count.md", "datamodels/summary-statistics/by_category.md", "datamodels/summary-statistics/by_ontology.md", "datamodels/summary-statistics/by_subset.md", "datamodels/summary-statistics/by_taxon.md", "datamodels/summary-statistics/change_summary.md", "datamodels/summary-statistics/class_count.md", "datamodels/summary-statistics/class_count_by_category.md", "datamodels/summary-statistics/class_count_by_subset.md", "datamodels/summary-statistics/class_count_excluding_deprecated.md", "datamodels/summary-statistics/class_count_with_definitions.md", "datamodels/summary-statistics/class_count_with_text_definitions.md", "datamodels/summary-statistics/class_count_without_text_definitions.md", "datamodels/summary-statistics/class_statistic_group.md", "datamodels/summary-statistics/compared_with.md", "datamodels/summary-statistics/contributor_id.md", "datamodels/summary-statistics/contributor_name.md", "datamodels/summary-statistics/contributor_summary.md", "datamodels/summary-statistics/count_statistic.md", "datamodels/summary-statistics/datatype_property_count.md", "datamodels/summary-statistics/deprecated_class_count.md", "datamodels/summary-statistics/deprecated_object_property_count.md", "datamodels/summary-statistics/description.md", "datamodels/summary-statistics/description_logic_profile.md", "datamodels/summary-statistics/distinct_synonym_count.md", "datamodels/summary-statistics/edge_count_by_predicate.md", "datamodels/summary-statistics/ended_at_time.md", "datamodels/summary-statistics/entailed_edge_count_by_predicate.md", "datamodels/summary-statistics/equivalent_classes_axiom_count.md", "datamodels/summary-statistics/equivalentclasses_axiom_count.md", "datamodels/summary-statistics/facet.md", "datamodels/summary-statistics/filtered_count.md", "datamodels/summary-statistics/id.md", "datamodels/summary-statistics/index.md", "datamodels/summary-statistics/individual_count.md", "datamodels/summary-statistics/individual_statistic_group.md", "datamodels/summary-statistics/label.md", "datamodels/summary-statistics/mapping_count.md", "datamodels/summary-statistics/mapping_statement_count_by_object_source.md", "datamodels/summary-statistics/mapping_statement_count_by_predicate.md", "datamodels/summary-statistics/mapping_statement_count_subject_by_object_source.md", "datamodels/summary-statistics/merged_class_count.md", "datamodels/summary-statistics/metadata_statistic_group.md", "datamodels/summary-statistics/named_individual_count.md", "datamodels/summary-statistics/non_deprecated_class_count.md", "datamodels/summary-statistics/non_deprecated_object_property_count.md", "datamodels/summary-statistics/normalization_comments.md", "datamodels/summary-statistics/object_property_count.md", "datamodels/summary-statistics/ontologies.md", "datamodels/summary-statistics/ontology_count.md", "datamodels/summary-statistics/owl_axiom_count.md", "datamodels/summary-statistics/owl_statistic_group.md", "datamodels/summary-statistics/partitions.md", "datamodels/summary-statistics/prefix.md", "datamodels/summary-statistics/property_count.md", "datamodels/summary-statistics/property_statistic_group.md", "datamodels/summary-statistics/rdf_triple_count.md", "datamodels/summary-statistics/role_counts.md", "datamodels/summary-statistics/started_at_time.md", "datamodels/summary-statistics/subclass_of_axiom_count.md", "datamodels/summary-statistics/subset_count.md", "datamodels/summary-statistics/summary-statistics.md", "datamodels/summary-statistics/synonym_statement_count.md", "datamodels/summary-statistics/synonym_statement_count_by_predicate.md", "datamodels/summary-statistics/title.md", "datamodels/summary-statistics/types.md", "datamodels/summary-statistics/unsatisfiable_class_count.md", "datamodels/summary-statistics/untyped_entity_count.md", "datamodels/summary-statistics/version.md", "datamodels/summary-statistics/version_info.md", "datamodels/summary-statistics/was_associated_with.md", "datamodels/summary-statistics/was_generated_by.md", "datamodels/taxon-constraints/Boolean.md", "datamodels/taxon-constraints/ConfigurationOption.md", "datamodels/taxon-constraints/Curie.md", "datamodels/taxon-constraints/Date.md", "datamodels/taxon-constraints/DateOrDatetime.md", "datamodels/taxon-constraints/Datetime.md", "datamodels/taxon-constraints/Decimal.md", "datamodels/taxon-constraints/Double.md", "datamodels/taxon-constraints/Float.md", "datamodels/taxon-constraints/Integer.md", "datamodels/taxon-constraints/Jsonpath.md", "datamodels/taxon-constraints/Jsonpointer.md", "datamodels/taxon-constraints/Ncname.md", "datamodels/taxon-constraints/Nodeidentifier.md", "datamodels/taxon-constraints/Objectidentifier.md", "datamodels/taxon-constraints/PredicateTerm.md", "datamodels/taxon-constraints/Sparqlpath.md", "datamodels/taxon-constraints/String.md", "datamodels/taxon-constraints/SubjectTerm.md", "datamodels/taxon-constraints/Taxon.md", "datamodels/taxon-constraints/TaxonConstraint.md", "datamodels/taxon-constraints/Term.md", "datamodels/taxon-constraints/Time.md", "datamodels/taxon-constraints/Uri.md", "datamodels/taxon-constraints/Uriorcurie.md", "datamodels/taxon-constraints/asserted.md", "datamodels/taxon-constraints/candidate.md", "datamodels/taxon-constraints/comments.md", "datamodels/taxon-constraints/contradicted_by.md", "datamodels/taxon-constraints/description.md", "datamodels/taxon-constraints/evolutionary.md", "datamodels/taxon-constraints/id.md", "datamodels/taxon-constraints/index.md", "datamodels/taxon-constraints/label.md", "datamodels/taxon-constraints/never_in.md", "datamodels/taxon-constraints/only_in.md", "datamodels/taxon-constraints/predicate.md", "datamodels/taxon-constraints/predicates.md", "datamodels/taxon-constraints/present_in.md", "datamodels/taxon-constraints/present_in_ancestor_of.md", "datamodels/taxon-constraints/redundant.md", "datamodels/taxon-constraints/redundant_with.md", "datamodels/taxon-constraints/redundant_with_only_in.md", "datamodels/taxon-constraints/sources.md", "datamodels/taxon-constraints/subject.md", "datamodels/taxon-constraints/taxon.md", "datamodels/taxon-constraints/taxon-constraints.md", "datamodels/taxon-constraints/unsatisfiable.md", "datamodels/taxon-constraints/via_terms.md", "datamodels/text-annotator/Boolean.md", "datamodels/text-annotator/Curie.md", "datamodels/text-annotator/Date.md", "datamodels/text-annotator/DateOrDatetime.md", "datamodels/text-annotator/Datetime.md", "datamodels/text-annotator/Decimal.md", "datamodels/text-annotator/Double.md", "datamodels/text-annotator/Float.md", "datamodels/text-annotator/HasSpan.md", "datamodels/text-annotator/Integer.md", "datamodels/text-annotator/Jsonpath.md", "datamodels/text-annotator/Jsonpointer.md", "datamodels/text-annotator/Ncname.md", "datamodels/text-annotator/Nodeidentifier.md", "datamodels/text-annotator/Objectidentifier.md", "datamodels/text-annotator/Position.md", "datamodels/text-annotator/Sparqlpath.md", "datamodels/text-annotator/String.md", "datamodels/text-annotator/TextAnnotation.md", "datamodels/text-annotator/TextAnnotationConfiguration.md", "datamodels/text-annotator/TextAnnotationResultSet.md", "datamodels/text-annotator/TextualElement.md", "datamodels/text-annotator/Time.md", "datamodels/text-annotator/TransformationType.md", "datamodels/text-annotator/Uri.md", "datamodels/text-annotator/Uriorcurie.md", "datamodels/text-annotator/annotations.md", "datamodels/text-annotator/categories.md", "datamodels/text-annotator/confidence.md", "datamodels/text-annotator/id.md", "datamodels/text-annotator/include_aliases.md", "datamodels/text-annotator/index.md", "datamodels/text-annotator/info.md", "datamodels/text-annotator/is_longest_match.md", "datamodels/text-annotator/limit.md", "datamodels/text-annotator/match_string.md", "datamodels/text-annotator/match_type.md", "datamodels/text-annotator/matches_whole_text.md", "datamodels/text-annotator/model.md", "datamodels/text-annotator/object_aliases.md", "datamodels/text-annotator/object_categories.md", "datamodels/text-annotator/object_id.md", "datamodels/text-annotator/object_label.md", "datamodels/text-annotator/object_source.md", "datamodels/text-annotator/parent_document.md", "datamodels/text-annotator/predicate_id.md", "datamodels/text-annotator/source_text.md", "datamodels/text-annotator/sources.md", "datamodels/text-annotator/subject_end.md", "datamodels/text-annotator/subject_label.md", "datamodels/text-annotator/subject_source.md", "datamodels/text-annotator/subject_start.md", "datamodels/text-annotator/subject_text_id.md", "datamodels/text-annotator/text.md", "datamodels/text-annotator/text-annotator.md", "datamodels/text-annotator/token_exclusion_list.md", "datamodels/text-annotator/types.md", "datamodels/validation/Boolean.md", "datamodels/validation/ConstraintComponent.md", "datamodels/validation/Curie.md", "datamodels/validation/Date.md", "datamodels/validation/DateOrDatetime.md", "datamodels/validation/Datetime.md", "datamodels/validation/Decimal.md", "datamodels/validation/Double.md", "datamodels/validation/ExternalReferenceValidationResult.md", "datamodels/validation/Float.md", "datamodels/validation/Integer.md", "datamodels/validation/Jsonpath.md", "datamodels/validation/Jsonpointer.md", "datamodels/validation/MappingValidationResult.md", "datamodels/validation/NamedResource.md", "datamodels/validation/Ncname.md", "datamodels/validation/Node.md", "datamodels/validation/Nodeidentifier.md", "datamodels/validation/Objectidentifier.md", "datamodels/validation/RepairConfiguration.md", "datamodels/validation/RepairOperation.md", "datamodels/validation/RepairReport.md", "datamodels/validation/Report.md", "datamodels/validation/Result.md", "datamodels/validation/SeverityOptions.md", "datamodels/validation/Sparqlpath.md", "datamodels/validation/String.md", "datamodels/validation/Time.md", "datamodels/validation/TypeSeverityKeyValue.md", "datamodels/validation/Uri.md", "datamodels/validation/Uriorcurie.md", "datamodels/validation/ValidationConfiguration.md", "datamodels/validation/ValidationReport.md", "datamodels/validation/ValidationResult.md", "datamodels/validation/ValidationResultType.md", "datamodels/validation/category.md", "datamodels/validation/confidence.md", "datamodels/validation/dry_run.md", "datamodels/validation/http_response_code.md", "datamodels/validation/id.md", "datamodels/validation/index.md", "datamodels/validation/info.md", "datamodels/validation/instantiates.md", "datamodels/validation/max_number_results_per_type.md", "datamodels/validation/modified.md", "datamodels/validation/number_of_attempts.md", "datamodels/validation/object.md", "datamodels/validation/object_id.md", "datamodels/validation/object_info.md", "datamodels/validation/object_str.md", "datamodels/validation/predicate.md", "datamodels/validation/predicate_id.md", "datamodels/validation/problem.md", "datamodels/validation/prompt_info.md", "datamodels/validation/repairs.md", "datamodels/validation/results.md", "datamodels/validation/schema_path.md", "datamodels/validation/severity.md", "datamodels/validation/source.md", "datamodels/validation/subject.md", "datamodels/validation/subject_id.md", "datamodels/validation/subject_info.md", "datamodels/validation/successful.md", "datamodels/validation/suggested_modifications.md", "datamodels/validation/suggested_predicate.md", "datamodels/validation/time_checked.md", "datamodels/validation/type.md", "datamodels/validation/type_severity_map.md", "datamodels/validation/types.md", "datamodels/validation/url.md", "datamodels/validation/validation_configuration.md", "datamodels/validation/validaton-results.md", "faq/architecture.rst", "faq/commandline.rst", "faq/contributing.rst", "faq/general.rst", "faq/index.rst", "faq/ontologies.rst", "faq/troubleshooting.rst", "glossary.rst", "guide/aliases.rst", "guide/associations.rst", "guide/basics.rst", "guide/curies-and-uris.rst", "guide/index.rst", "guide/learning-more.rst", "guide/logical-definitions.rst", "guide/mappings.rst", "guide/obsoletion.rst", "guide/primary-labels.rst", "guide/relationships-and-graphs.rst", "guide/similarity.rst", "howtos/fhir-conversions.rst", "howtos/index.rst", "howtos/perform-lexical-matching.rst", "howtos/roll-up-annotations-to-a-subset.rst", "howtos/use-llms.rst", "howtos/validate-an-obo-ontology.md", "howtos/visualize-ontology-subgraphs.rst", "howtos/write-a-plugin.rst", "index.rst", "intro/index.rst", "intro/tutorial01.rst", "intro/tutorial02.rst", "intro/tutorial03.rst", "intro/tutorial04.rst", "intro/tutorial05.rst", "intro/tutorial06.rst", "intro/tutorial07.rst", "intro/tutorial08.rst", "introduction.rst", "logos/README.md", "notebooks.rst", "packages/architecture.rst", "packages/best-practice.rst", "packages/converters/data-model-converter.rst", "packages/converters/index.rst", "packages/converters/obo-graph-to-cx.rst", "packages/converters/obo-graph-to-fhir.rst", "packages/converters/obo-graph-to-obo-format.rst", "packages/converters/obo-graph-to-owl.rst", "packages/implementations/aggregator.rst", "packages/implementations/bioportal.rst", "packages/implementations/funowl.rst", "packages/implementations/gilda.rst", "packages/implementations/index.rst", "packages/implementations/llm.rst", "packages/implementations/obograph.rst", "packages/implementations/ols.rst", "packages/implementations/ontobee.rst", "packages/implementations/owlery.rst", "packages/implementations/pantherdb.rst", "packages/implementations/pronto.rst", "packages/implementations/robot-template.rst", "packages/implementations/simple_obo.rst", "packages/implementations/sparql.rst", "packages/implementations/sqldb.rst", "packages/implementations/ubergraph.rst", "packages/index.rst", "packages/interfaces/association-provider.rst", "packages/interfaces/basic.rst", "packages/interfaces/class-enrichment.rst", "packages/interfaces/differ.rst", "packages/interfaces/dumper.rst", "packages/interfaces/index.rst", "packages/interfaces/mapping-provider.rst", "packages/interfaces/obograph.rst", "packages/interfaces/owl.rst", "packages/interfaces/patcher.rst", "packages/interfaces/relation-graph.rst", "packages/interfaces/search.rst", "packages/interfaces/semantic-similarity.rst", "packages/interfaces/subsetting.rst", "packages/interfaces/summary-statistics.rst", "packages/interfaces/text-annotator.rst", "packages/interfaces/validator.rst", "packages/selectors.rst", "packages/src/oaklib.utilities.apikey_manager.rst", "packages/src/oaklib.utilities.graph.networkx_bridge.rst", "packages/src/oaklib.utilities.graph.relationship_walker.rst", "packages/src/oaklib.utilities.lexical.lexical_indexer.rst", "packages/src/oaklib.utilities.obograph_utils.rst", "packages/src/oaklib.utilities.subsets.slimmer_utils.rst", "packages/src/oaklib.utilities.table_filler.rst", "packages/src/oaklib.utilities.taxon.rst", "packages/utilities.rst", "rdf-owl-layering.rst", "search-syntax.rst"], "titles": ["Command Line", "Ontology Concepts", "Contribution Guidelines", "Class: Association", "Class: AssociationChange", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Class: NegatedAssociation", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: PairwiseCoAssociation", "Class: ParserConfiguration", "Class: PositiveOrNegativeAssociation", "Class: PropertyValue", "Class: RollupGroup", "Type: Sparqlpath", "Type: String", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: aggregator_knowledge_source", "association", "Slot: associations", "Slot: associations_for_subjects_in_common", "Slot: closure_delta", "Slot: closure_information_content_delta", "Slot: closure_predicates", "Slot: comments", "Slot: core_triple", "Slot: creation_date", "Slot: date", "Slot: denormalized_slot", "Slot: diff_slot", "Slot: evidence_type", "Slot: group_object", "Slot: include_association_attributes", "OAK Association Data Model", "Slot: is_creation", "Slot: is_deletion", "Slot: is_generalization", "Slot: is_migration", "Slot: is_specialization", "Slot: modification_date", "Slot: negated", "Slot: new_date", "Slot: new_object", "Slot: new_predicate", "Slot: number_subject_unique_to_entity1", "Slot: number_subject_unique_to_entity2", "Slot: number_subjects_in_common", "Slot: number_subjects_in_union", "Slot: object", "Slot: object1", "Slot: object1_label", "Slot: object2", "Slot: object2_label", "Slot: object_closure", "Slot: object_closure_label", "Slot: object_label", "Slot: old_date", "Slot: old_object", "Slot: old_object_obsolete", "Slot: old_predicate", "Slot: original_object", "Slot: original_predicate", "Slot: original_subject", "Slot: predicate", "Slot: predicate_label", "Slot: preserve_negated_associations", "Slot: primary_knowledge_source", "Slot: property_values", "Slot: proportion_subjects_in_common", "Slot: publication_is_added", "Slot: publication_is_deleted", "Slot: publications", "Slot: sub_groups", "Slot: subject", "Slot: subject_closure", "Slot: subject_closure_label", "Slot: subject_label", "Slot: subjects_in_common", "Slot: summary_group", "Slot: supporting_objects", "Type: Boolean", "Class: ClassEnrichmentConfiguration", "Class: ClassEnrichmentResult", "Class: ClassEnrichmentResultSet", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Type: Position", "Enum: SortFieldEnum", "Type: Sparqlpath", "Type: String", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: ancestor_of_more_informative_result", "Slot: background_count", "Slot: background_total", "class-enrichment", "Slot: class_id", "Slot: class_label", "Slot: descendant_of_more_informative_result", "Slot: direction", "Slot: false_discovery_rate", "Slot: fold_enrichment", "Class Enrichment Datamodel", "Slot: p_value", "Slot: p_value_adjusted", "Slot: p_value_cutoff", "Slot: probability", "Slot: rank", "Slot: results", "Slot: sample_count", "Slot: sample_total", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Enum: DiffCategory", "Type: Double", "Type: EntityReference", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Label", "Enum: MappingCardinalityEnum", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Position", "Class: RelationalDiff", "Type: Source", "Type: Sparqlpath", "Type: String", "Class: StructureDiffResultSet", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: category", "cross-ontology-diff", "Cross-Ontology Diff", "Slot: is_functional", "Slot: label", "Slot: left_object_id", "Slot: left_object_is_functional", "Slot: left_object_label", "Slot: left_object_name", "Slot: left_predicate_id", "Slot: left_predicate_label", "Slot: left_predicate_name", "Slot: left_side", "Slot: left_source", "Slot: left_subject_id", "Slot: left_subject_is_functional", "Slot: left_subject_label", "Slot: left_subject_name", "Slot: object", "Slot: object_mapping_cardinality", "Slot: object_mapping_predicate", "Slot: predicate", "Slot: results", "Slot: right_intermediate_ids", "Slot: right_object_id", "Slot: right_object_label", "Slot: right_object_name", "Slot: right_predicate_ids", "Slot: right_predicate_labels", "Slot: right_predicate_names", "Slot: right_side", "Slot: right_source", "Slot: right_subject_id", "Slot: right_subject_label", "Slot: right_subject_name", "Slot: side", "Slot: subject", "Slot: subject_mapping_cardinality", "Slot: subject_mapping_predicate", "types", "FunOwl", "Datamodels", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Class: ItemList", "Class: ItemListCollection", "Enum: ItemListOrderType", "Type: Jsonpath", "Type: Jsonpointer", "Class: ListItem", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Type: Sparqlpath", "Type: String", "Class: Thing", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: additionalType", "Slot: categories", "Slot: description", "Slot: elementId", "Slot: id", "Slot: idType", "Slot: identifiers", "Item List Data Model", "Slot: item", "itemList", "Slot: itemListElements", "Slot: itemLists", "Slot: itemMetadataMap", "Slot: keywords", "Slot: name", "Slot: numberOfItems", "Slot: position", "Slot: previousItem", "Slot: type", "Slot: url", "Slot: wasGeneratedBy", "KGCL", "Class: Activity", "Class: Any", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Class: LexicalGrouping", "Class: LexicalIndex", "Class: LexicalTransformation", "Class: LexicalTransformationPipeline", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: RelationshipToTerm", "Type: Sparqlpath", "Type: String", "Type: Time", "Enum: TransformationType", "Type: Uri", "Type: Uriorcurie", "Slot: element", "Slot: element_term", "Slot: groupings", "Lexical Index", "lexical-index", "lexican-index", "Slot: name", "Slot: params", "Slot: pipeline", "Slot: pipelines", "Slot: predicate", "Slot: relationships", "Slot: source", "Slot: synonymized", "Slot: term", "Slot: transformations", "Slot: type", "types", "Class: Activity", "Class: Any", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Class: LexicalGrouping", "Class: LexicalIndex", "Class: LexicalTransformation", "Class: LexicalTransformationPipeline", "Class: MappingRule", "Class: MappingRuleCollection", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: Postcondition", "Class: Precondition", "Type: RegularExpressionString", "Class: RelationshipToTerm", "Class: RuleSet", "Type: Sparqlpath", "Type: String", "Class: Synonymizer", "Class: Test", "Type: Time", "Enum: TransformationType", "Type: Uri", "Type: Uriorcurie", "Slot: description", "Slot: element", "Slot: element_term", "Slot: groupings", "Mapping Rules Datamodel", "Slot: input", "lexical-index", "lexican-index", "mapping-rules", "mapping-rules-datamodel", "Slot: mapping_source_one_of", "Slot: match", "Slot: match_scope", "Slot: minimum_confidence", "Slot: name", "Slot: object_match_field_one_of", "Slot: object_source_one_of", "Slot: oneway", "Slot: output", "Slot: params", "Slot: pipeline", "Slot: pipelines", "Slot: postconditions", "Slot: preconditions", "Slot: predicate", "Slot: predicate_id", "Slot: predicate_id_one_of", "Slot: prefix", "Slot: qualifier", "Slot: relationships", "Slot: replacement", "Slot: rules", "Slot: source", "Slot: subject_match_field_one_of", "Slot: subject_source_one_of", "Slot: synonymized", "Slot: synonymizer", "Slot: term", "Slot: tests", "Slot: transformations", "Slot: transformations_included_in", "Slot: type", "types", "Slot: weight", "Class: Axiom", "Class: BasicPropertyValue", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Class: DefinitionPropertyValue", "Class: DisjointClassExpressionsAxiom", "Class: DomainRangeAxiom", "Type: Double", "Class: Edge", "Class: EquivalentNodesSet", "Class: ExistentialRestrictionExpression", "Type: Float", "Class: Graph", "Class: GraphDocument", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Class: LogicalDefinitionAxiom", "Class: Meta", "Type: Ncname", "Class: Node", "Enum: NodeTypeEnum", "Type: Nodeidentifier", "Type: Objectidentifier", "Type: OboIdentifierString", "PredsEnum", "Class: PrefixDeclaration", "Class: PropertyChainAxiom", "Enum: PropertyTypeEnum", "Class: PropertyValue", "Enum: ScopeEnum", "ScopesEnum", "Type: Sparqlpath", "Type: String", "Class: SubsetDefinition", "Class: SynonymPropertyValue", "Class: SynonymTypeDefinition", "Type: SynonymTypeIdentifierString", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Class: XrefPropertyValue", "Type: XrefString", "Slot: allValuesFromEdges", "Slot: basicPropertyValues", "Slot: chainPredicateIds", "Slot: classExpressions", "Slot: classIds", "Slot: comments", "Slot: definedClassId", "Slot: definition", "Slot: deprecated", "Slot: disjointClassExpressionsAxioms", "Slot: domainClassIds", "Slot: domainRangeAxioms", "Slot: edges", "Slot: equivalentNodesSets", "Slot: fillerId", "Slot: genusIds", "Slot: graphs", "Slot: id", "Obographs Datamodel", "Slot: isExact", "Slot: label", "Slot: lang", "Slot: lbl", "Slot: logicalDefinitionAxioms", "Slot: meta", "Slot: namespace", "Slot: nodeIds", "Slot: nodes", "Slot: obj", "obographs_datamodel", "obographs_linkml_model", "Slot: pred", "Slot: predicateId", "Slot: prefix", "Slot: prefixes", "Slot: propertyChainAxioms", "Slot: propertyId", "Slot: propertyType", "Slot: rangeClassIds", "Slot: representativeNodeId", "Slot: representitiveNodeId", "Slot: restrictions", "Slot: scope", "Slot: sub", "Slot: subsetDefinitions", "Slot: subsets", "Slot: synonymType", "Slot: synonymTypeDefinitions", "Slot: synonyms", "Slot: type", "types", "Slot: unionEquivalentTo", "Slot: unionEquivalentToExpression", "Slot: val", "Slot: valType", "Slot: version", "Slot: xrefs", "Class: Agent", "Subset: AllotropePermittedProfile", "Subset: AllotropeRequiredProfile", "Class: Annotation", "Class: AnnotationProperty", "Class: AnnotationPropertyMixin", "Class: Anonymous", "Class: AnonymousClassExpression", "Class: Any", "Class: Axiom", "Type: Boolean", "Type: CURIELiteral", "Class: Class", "Class: ClassExpression", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Enum: DefinitionConstraintComponent", "Type: Double", "Class: Expression", "Type: Float", "Subset: GoPermittedProfile", "Subset: GoRecommendedProfile", "Subset: GoRequiredProfile", "Class: HasCategory", "Class: HasLifeCycle", "Class: HasMappings", "Class: HasMinimalMetadata", "Class: HasProvenance", "Class: HasSynonyms", "Class: HasUserInformation", "Class: HomoSapiens", "Slot: IEDB_alternative_term", "Slot: ISA_alternative_term", "Class: Image", "Type: Integer", "Type: IriType", "Type: Jsonpath", "Type: Jsonpointer", "Type: LabelType", "Slot: NCIT_definition_source", "Slot: NCIT_term_source", "Slot: NCIT_term_type", "Class: NamedIndividual", "Class: NamedObject", "Type: NarrativeText", "Type: Ncname", "Type: Nodeidentifier", "Class: NotObsoleteAspect", "Slot: OBO_foundry_unique_label", "Subset: ObiPermittedProfile", "Subset: ObiRequiredProfile", "Class: ObjectProperty", "Type: Objectidentifier", "Class: ObsoleteAspect", "Class: Ontology", "Ontology-Metadata", "Class: Property", "Class: PropertyExpression", "Class: Restriction", "Type: Sparqlpath", "Type: String", "Class: Subset", "Class: Term", "Class: Thing", "Type: TidyString", "Type: Time", "Class: TransitiveProperty", "Type: URLLiteral", "Type: Uri", "Type: Uriorcurie", "Slot: allValuesFrom", "Slot: alternative_term", "Slot: annotatedProperty", "Slot: annotatedSource", "Slot: annotatedTarget", "Slot: annotations", "Slot: broadMatch", "Slot: cardinality", "Slot: category", "Slot: changeNote", "Slot: closeMatch", "Slot: comment", "Slot: complementOf", "Slot: conformsTo", "Slot: consider", "Slot: contributor", "Slot: core_property", "Slot: created", "Slot: created_by", "Slot: creation_date", "Slot: creator", "Slot: curator_note", "Slot: database_cross_reference", "Slot: date", "Slot: date_retrieved", "Slot: defaultLanguage", "Slot: definition", "Slot: definition_source", "Slot: depicted_by", "Slot: deprecated", "Slot: disconnected_from", "Slot: disjointWith", "Slot: distinctMembers", "Slot: domain", "Slot: editor_note", "Slot: editor_preferred_term", "Slot: equivalentClass", "Slot: equivalentProperty", "Slot: evidence", "Slot: exactMatch", "Slot: example_of_usage", "Slot: excluded_axiom", "Slot: excluded_from_QC_check", "Slot: excluded_subClassOf", "Slot: excluded_synonym", "Slot: external_ontology", "Slot: hasValue", "Slot: has_alternative_id", "Slot: has_axiom_label", "Slot: has_broad_synonym", "Slot: has_curation_status", "Slot: has_exact_synonym", "Slot: has_narrow_synonym", "Slot: has_obo_namespace", "Slot: has_obsolescence_reason", "Slot: has_ontology_root_term", "Slot: has_rank", "Slot: has_related_synonym", "Slot: has_synonym_type", "Slot: id", "Slot: image", "Slot: imported_from", "Slot: imports", "Slot: in_subset", "Ontology Metadata Ontology Schema", "Slot: informative_property", "Slot: intersectionOf", "Slot: inverseOf", "Slot: isDefinedBy", "Slot: is_a_defining_property_chain_axiom", "Slot: is_a_defining_property_chain_axiom_where_second_argument_is_reflexive", "Slot: is_class_level", "Slot: is_cyclic", "Slot: is_inferred", "Slot: is_metadata_tag", "Slot: is_transitive", "Slot: label", "Slot: language", "Slot: license", "Slot: logical_predicate", "Slot: match", "Slot: match_aspect", "Slot: maxQualifiedCardinality", "Slot: members", "Slot: minCardinality", "Slot: minQualifiedCardinality", "Slot: narrowMatch", "Slot: never_in_taxon", "Slot: notes", "Slot: object", "Slot: oboInOwl_id", "Slot: oboInOwl_ontology", "Slot: obsoletion_related_property", "omo-schema", "Slot: onClass", "Slot: onProperty", "Slot: oneOf", "Slot: ontology_term_requester", "Slot: page", "Slot: predicate", "Slot: propertyChainAxiom", "Slot: provenance_property", "Slot: qualifiedCardinality", "Slot: range", "Slot: reification_predicate", "Slot: sameAs", "Slot: seeAlso", "Slot: shortcut_annotation_property", "Slot: shorthand", "Slot: should_conform_to", "Slot: someValuesFrom", "Slot: source", "Slot: subClassOf", "Slot: synonym", "Slot: temporal_interpretation", "Slot: term_editor", "Slot: term_replaced_by", "Slot: term_tracker_item", "Slot: title", "Slot: type", "types", "Slot: unionOf", "Slot: url", "Slot: versionIRI", "Slot: versionInfo", "Slot: version_property", "Type: Boolean", "Enum: BooleanOperator", "Class: ComplexQuery", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Enum: GraphFunction", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: PathExpression", "Class: SearchBaseConfiguration", "Enum: SearchProperty", "Class: SearchResult", "Class: SearchResultSet", "Type: SearchTerm", "Enum: SearchTermSyntax", "Type: Sparqlpath", "Type: String", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: all_of", "Slot: any_of", "Slot: atom", "Slot: categories", "Slot: configuration", "Slot: cursor", "Slot: force_case_insensitive", "Slot: graph_predicates", "Slot: include_aliases", "Slot: include_definition", "Slot: include_id", "Slot: include_label", "Slot: include_obsoletes_in_results", "search datamodel", "Slot: is_complete", "Slot: is_fuzzy", "Slot: is_partial", "Slot: is_regular_expression", "Slot: limit", "Slot: matches_full_search_term", "Slot: none_of", "Slot: object_id", "Slot: object_label", "Slot: object_match_field", "Slot: object_source", "Slot: object_source_version", "Slot: path_to", "Slot: properties", "Slot: rank", "Slot: result_count", "Slot: results", "search-datamodel", "Slot: search_term", "Slot: search_terms", "Slot: snippet", "Slot: syntax", "Slot: traversal", "types", "SemSQL", "Class: BestMatch", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: ItemCount", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: NegativeLogValue", "Type: Nodeidentifier", "Type: NonNegativeFloat", "Type: Objectidentifier", "Class: PairwiseSimilarity", "Type: Sparqlpath", "Type: String", "Class: TermInfo", "Class: TermPairwiseSimilarity", "Class: TermSetPairwiseSimilarity", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Type: ZeroToOne", "Slot: ancestor_id", "Slot: ancestor_information_content", "Slot: ancestor_label", "Slot: ancestor_source", "Slot: average_score", "Slot: best_score", "Slot: cosine_similarity", "Slot: dice_similarity", "Slot: id", "Semantic Similarity", "Slot: information_content", "Slot: intersection_count", "Slot: jaccard_similarity", "Slot: label", "Slot: match_source", "Slot: match_source_label", "Slot: match_subsumer", "Slot: match_subsumer_label", "Slot: match_target", "Slot: match_target_label", "Slot: metric", "Slot: object_best_matches", "Slot: object_id", "Slot: object_information_content", "Slot: object_label", "Slot: object_source", "Slot: object_termset", "Slot: overlap_coefficient", "Slot: phenodigm_score", "Slot: score", "Slot: similarity", "Slot: subject_best_matches", "Slot: subject_id", "Slot: subject_information_content", "Slot: subject_label", "Slot: subject_source", "Slot: subject_termset", "Slot: subsumed_by_score", "Slot: subsumes_score", "types", "Slot: union_count", "SSSOM", "Class: Agent", "Type: Boolean", "Class: ChangeTypeStatistic", "Class: ContributorRole", "Class: ContributorStatistics", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Class: FacetStatistics", "Class: FacetedCount", "Type: Float", "Class: GlobalStatistics", "Class: GroupedStatistics", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: Ontology", "Type: Sparqlpath", "Type: String", "Class: SummaryStatisticCollection", "Class: SummaryStatisticsCalculationActivity", "Class: SummaryStatisticsReport", "Type: Time", "Class: UngroupedStatistics", "Type: Uri", "Type: Uriorcurie", "Slot: acted_on_behalf_of", "Slot: agents", "Slot: annotation_property_count", "Slot: anonymous_class_expression_count", "Slot: anonymous_individual_count", "Slot: by_category", "Slot: by_ontology", "Slot: by_subset", "Slot: by_taxon", "Slot: change_summary", "Slot: class_count", "Slot: class_count_by_category", "Slot: class_count_by_subset", "Slot: class_count_excluding_deprecated", "Slot: class_count_with_definitions", "Slot: class_count_with_text_definitions", "Slot: class_count_without_text_definitions", "Slot: class_statistic_group", "Slot: compared_with", "Slot: contributor_id", "Slot: contributor_name", "Slot: contributor_summary", "Slot: count_statistic", "Slot: datatype_property_count", "Slot: deprecated_class_count", "Slot: deprecated_object_property_count", "Slot: description", "Slot: description_logic_profile", "Slot: distinct_synonym_count", "Slot: edge_count_by_predicate", "Slot: ended_at_time", "Slot: entailed_edge_count_by_predicate", "Slot: equivalent_classes_axiom_count", "Slot: equivalentclasses_axiom_count", "Slot: facet", "Slot: filtered_count", "Slot: id", "Summary Statistics Datamodel", "Slot: individual_count", "Slot: individual_statistic_group", "Slot: label", "Slot: mapping_count", "Slot: mapping_statement_count_by_object_source", "Slot: mapping_statement_count_by_predicate", "Slot: mapping_statement_count_subject_by_object_source", "Slot: merged_class_count", "Slot: metadata_statistic_group", "Slot: named_individual_count", "Slot: non_deprecated_class_count", "Slot: non_deprecated_object_property_count", "Slot: normalization_comments", "Slot: object_property_count", "Slot: ontologies", "Slot: ontology_count", "Slot: owl_axiom_count", "Slot: owl_statistic_group", "Slot: partitions", "Slot: prefix", "Slot: property_count", "Slot: property_statistic_group", "Slot: rdf_triple_count", "Slot: role_counts", "Slot: started_at_time", "Slot: subclass_of_axiom_count", "Slot: subset_count", "summary-statistics", "Slot: synonym_statement_count", "Slot: synonym_statement_count_by_predicate", "Slot: title", "types", "Slot: unsatisfiable_class_count", "Slot: untyped_entity_count", "Slot: version", "Slot: version_info", "Slot: was_associated_with", "Slot: was_generated_by", "Type: Boolean", "Enum: ConfigurationOption", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: PredicateTerm", "Type: Sparqlpath", "Type: String", "Class: SubjectTerm", "Class: Taxon", "Class: TaxonConstraint", "Class: Term", "Type: Time", "Type: Uri", "Type: Uriorcurie", "Slot: asserted", "Slot: candidate", "Slot: comments", "Slot: contradicted_by", "Slot: description", "Slot: evolutionary", "Slot: id", "Taxon Constraints Reporting Datamodel", "Slot: label", "Slot: never_in", "Slot: only_in", "Slot: predicate", "Slot: predicates", "Slot: present_in", "Slot: present_in_ancestor_of", "Slot: redundant", "Slot: redundant_with", "Slot: redundant_with_only_in", "Slot: sources", "Slot: subject", "Slot: taxon", "taxon-constraints", "Slot: unsatisfiable", "Slot: via_terms", "Type: Boolean", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Type: Float", "Class: HasSpan", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Type: Ncname", "Type: Nodeidentifier", "Type: Objectidentifier", "Type: Position", "Type: Sparqlpath", "Type: String", "Class: TextAnnotation", "Class: TextAnnotationConfiguration", "Class: TextAnnotationResultSet", "Class: TextualElement", "Type: Time", "Enum: TransformationType", "Type: Uri", "Type: Uriorcurie", "Slot: annotations", "Slot: categories", "Slot: confidence", "Slot: id", "Slot: include_aliases", "Text Annotator Datamodel", "Slot: info", "Slot: is_longest_match", "Slot: limit", "Slot: match_string", "Slot: match_type", "Slot: matches_whole_text", "Slot: model", "Slot: object_aliases", "Slot: object_categories", "Slot: object_id", "Slot: object_label", "Slot: object_source", "Slot: parent_document", "Slot: predicate_id", "Slot: source_text", "Slot: sources", "Slot: subject_end", "Slot: subject_label", "Slot: subject_source", "Slot: subject_start", "Slot: subject_text_id", "Slot: text", "text-annotator", "Slot: token_exclusion_list", "types", "Type: Boolean", "Class: ConstraintComponent", "Type: Curie", "Type: Date", "Type: DateOrDatetime", "Type: Datetime", "Type: Decimal", "Type: Double", "Class: ExternalReferenceValidationResult", "Type: Float", "Type: Integer", "Type: Jsonpath", "Type: Jsonpointer", "Class: MappingValidationResult", "Class: NamedResource", "Type: Ncname", "Class: Node", "Type: Nodeidentifier", "Type: Objectidentifier", "Class: RepairConfiguration", "Class: RepairOperation", "Class: RepairReport", "Class: Report", "Class: Result", "Enum: SeverityOptions", "Type: Sparqlpath", "Type: String", "Type: Time", "Class: TypeSeverityKeyValue", "Type: Uri", "Type: Uriorcurie", "Class: ValidationConfiguration", "Class: ValidationReport", "Class: ValidationResult", "Enum: ValidationResultType", "Slot: category", "Slot: confidence", "Slot: dry_run", "Slot: http_response_code", "Slot: id", "Validation Results Datamodel", "Slot: info", "Slot: instantiates", "Slot: max_number_results_per_type", "Slot: modified", "Slot: number_of_attempts", "Slot: object", "Slot: object_id", "Slot: object_info", "Slot: object_str", "Slot: predicate", "Slot: predicate_id", "Slot: problem", "Slot: prompt_info", "Slot: repairs", "Slot: results", "Slot: schema_path", "Slot: severity", "Slot: source", "Slot: subject", "Slot: subject_id", "Slot: subject_info", "Slot: successful", "Slot: suggested_modifications", "Slot: suggested_predicate", "Slot: time_checked", "Slot: type", "Slot: type_severity_map", "types", "Slot: url", "Slot: validation_configuration", "validaton-results", "FAQ: Architecture and Design", "FAQ: Command Line", "FAQ: Contributing", "FAQ: General", "FAQ", "FAQ: Ontologies", "FAQ: Troubleshooting", "Glossary", "Aliases and Synonyms", "Associations and Curated Annotations", "OAK Basics", "Identifying entities: CURIEs and URIs", "The OAK Guide", "Learning More", "Logical Definitions", "Mappings and Cross-References", "Obsoletion", "Primary Labels", "Relationships and Graphs", "Computing Similarity between Entities", "FHIR Conversions", "How-To Guides", "<no title>", "<no title>", "How to use Large Language Models (LLMs) with OAK", "How to Validate an OBO ontology using Obo Metadata Ontology schema", "<no title>", "How to write a plugin", "Ontology Access Kit (OAK) Documentation", "Tutorial", "Part 1: Getting Started", "Part 2: Basic Python", "Part 3: Triplestore Backends", "Part 4: OboGraphs", "Part 5: Graph Visualization", "Part 6: Working With OWL", "Part 7: SQLite files", "Part 8: Applying Changes to Ontologies", "Introduction", "<no title>", "Jupyter Notebooks", "Architecture", "Best Practice", "Abstract Class", "Converters", "OBO Graph to CX Converter", "OBO Graph to FHIR Converter", "OBO Graph to OBO Format Converter", "OBO Graph to OWL Converter", "Aggregator Adapter", "Bioportal Adapter", "FunOwl Adapter", "Gilda Adapter", "Implementations", "LLM Adapter", "OBO Graph Adapter", "Ontology Lookup Service (OLS) Adapter", "Ontobee Adapter", "Owlery Adapter", "PantherDB Adapter", "Pronto / OBO Files Adapter", "ROBOT Template Adapter", "Simple OBO Adapter", "Sparql Adapter", "SQL Database Adapter", "Ubergraph Adapter", "OAK Library Documentation", "Association Provider Interface", "Basic Ontology Interface", "Class Enrichment Calculation Interface", "Differ Interface", "Dumper Interface", "Interfaces", "Mapping Provider Interface", "OboGraph Interface", "OWL Interface", "Patcher Interface", "Relation Graph", "Search Interface", "Semantic Similarity Interface", "Subsetting", "Summary Statistics", "Text Annotator Interface", "Validator Interface", "Ontology Adapter Selectors", "oaklib.utilities.apikey_manager", "oaklib.utilities.graph.networkx_bridge", "oaklib.utilities.graph.relationship_walker", "oaklib.utilities.lexical.lexical_indexer", "oaklib.utilities.obograph_utils", "oaklib.utilities.subsets.slimmer_utils", "oaklib.utilities.table_filler", "oaklib.utilities.taxon", "Utilities", "Layering on RDF/OWL", "Search Syntax"], "terms": {"we": [0, 1, 2, 250, 745, 815, 942, 959, 1103, 1104, 1105, 1106, 1108, 1109, 1110, 1111, 1112, 1113, 1116, 1119, 1120, 1121, 1122, 1126, 1129, 1132, 1133, 1134, 1135, 1137, 1138, 1139, 1143, 1163, 1166, 1169, 1170, 1171, 1177, 1186, 1196], "follow": [0, 2, 41, 46, 414, 440, 468, 479, 488, 498, 508, 512, 515, 524, 544, 628, 939, 943, 1102, 1103, 1105, 1109, 1111, 1113, 1116, 1120, 1122, 1126, 1127, 1129, 1132, 1133, 1134, 1135, 1136, 1138, 1140, 1144, 1148, 1162, 1166, 1170, 1176, 1185, 1186], "clig": [0, 1103, 1144], "far": [0, 2, 1103, 1116, 1132, 1134, 1135, 1152, 1163], "possibl": [0, 1, 2, 768, 774, 1103, 1105, 1109, 1110, 1120, 1132, 1134, 1144, 1170, 1185, 1195, 1196], "you": [0, 1, 204, 214, 215, 230, 1103, 1104, 1105, 1107, 1108, 1110, 1111, 1112, 1113, 1115, 1116, 1117, 1118, 1119, 1120, 1121, 1126, 1127, 1129, 1132, 1133, 1135, 1136, 1138, 1143, 1144, 1148, 1152, 1159, 1161, 1162, 1163, 1166, 1169, 1174, 1175, 1180, 1186, 1196], "ar": [0, 1, 2, 3, 17, 22, 31, 41, 46, 66, 67, 87, 88, 142, 155, 165, 204, 216, 267, 275, 281, 284, 293, 312, 313, 328, 331, 335, 345, 348, 353, 354, 367, 370, 376, 383, 384, 387, 388, 389, 396, 397, 408, 414, 416, 420, 425, 426, 437, 440, 446, 448, 451, 461, 463, 478, 696, 697, 720, 734, 738, 740, 768, 774, 831, 843, 845, 885, 900, 944, 956, 966, 992, 996, 1003, 1004, 1011, 1061, 1070, 1073, 1102, 1103, 1104, 1106, 1107, 1108, 1109, 1110, 1111, 1112, 1113, 1116, 1117, 1118, 1119, 1120, 1121, 1122, 1123, 1126, 1127, 1132, 1133, 1134, 1135, 1136, 1137, 1138, 1139, 1140, 1143, 1144, 1146, 1148, 1152, 1154, 1161, 1163, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1174, 1175, 1177, 1178, 1179, 1180, 1181, 1182, 1185, 1186, 1195, 1196], "run": [0, 2, 275, 328, 996, 1105, 1118, 1126, 1131, 1138, 1148, 1180], "thi": [0, 1, 4, 6, 21, 22, 42, 45, 46, 49, 50, 51, 56, 71, 72, 95, 97, 117, 123, 127, 132, 134, 137, 144, 204, 206, 214, 215, 219, 225, 229, 232, 234, 235, 251, 254, 296, 299, 339, 375, 378, 384, 385, 389, 391, 396, 397, 399, 403, 408, 413, 414, 415, 421, 422, 423, 427, 428, 432, 434, 437, 440, 444, 446, 449, 454, 458, 460, 463, 467, 468, 473, 474, 479, 483, 485, 491, 493, 506, 512, 515, 524, 525, 533, 536, 538, 543, 544, 545, 548, 599, 611, 616, 681, 696, 698, 720, 735, 738, 740, 748, 764, 821, 831, 843, 845, 885, 892, 926, 939, 943, 944, 945, 950, 952, 956, 960, 964, 965, 968, 969, 972, 974, 992, 1004, 1011, 1027, 1032, 1052, 1053, 1061, 1070, 1073, 1083, 1102, 1103, 1105, 1107, 1108, 1109, 1110, 1111, 1112, 1113, 1114, 1115, 1116, 1117, 1118, 1119, 1120, 1121, 1122, 1123, 1126, 1129, 1131, 1132, 1133, 1134, 1135, 1137, 1138, 1139, 1140, 1143, 1144, 1145, 1148, 1151, 1152, 1157, 1158, 1159, 1161, 1162, 1163, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1182, 1183, 1184, 1185, 1186, 1195, 1196, 1197], "an": [0, 1, 2, 3, 4, 7, 13, 17, 19, 22, 23, 24, 28, 31, 42, 44, 46, 61, 76, 91, 98, 104, 109, 115, 127, 138, 142, 146, 153, 155, 156, 161, 163, 165, 166, 168, 169, 170, 172, 173, 175, 177, 178, 179, 182, 183, 186, 187, 188, 190, 191, 195, 196, 200, 201, 203, 204, 207, 213, 214, 219, 222, 227, 229, 230, 232, 234, 236, 237, 245, 246, 251, 255, 261, 265, 266, 270, 271, 276, 278, 279, 280, 281, 282, 283, 285, 286, 287, 288, 290, 291, 294, 296, 300, 306, 310, 311, 313, 317, 319, 321, 329, 331, 332, 333, 334, 335, 337, 338, 341, 346, 347, 348, 350, 351, 352, 353, 354, 355, 357, 363, 364, 365, 366, 367, 371, 372, 375, 376, 379, 383, 384, 385, 387, 388, 389, 391, 392, 393, 396, 397, 399, 402, 403, 405, 406, 408, 414, 415, 418, 420, 423, 424, 425, 426, 427, 428, 429, 430, 436, 437, 438, 439, 440, 441, 443, 444, 446, 447, 450, 451, 453, 454, 455, 457, 458, 459, 461, 463, 465, 467, 468, 470, 471, 473, 474, 475, 476, 477, 478, 479, 483, 485, 488, 491, 494, 498, 505, 508, 512, 513, 514, 515, 516, 517, 520, 524, 525, 530, 533, 534, 536, 538, 543, 544, 545, 548, 550, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 583, 585, 586, 587, 589, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 607, 609, 611, 612, 613, 614, 615, 616, 619, 620, 623, 624, 626, 627, 628, 630, 638, 649, 650, 652, 655, 658, 660, 661, 663, 666, 667, 668, 669, 670, 671, 675, 676, 682, 689, 694, 696, 697, 698, 705, 720, 726, 728, 729, 730, 731, 732, 735, 740, 741, 749, 755, 763, 764, 771, 783, 816, 822, 832, 837, 838, 842, 843, 845, 846, 848, 857, 874, 878, 884, 885, 888, 905, 910, 916, 920, 921, 922, 927, 933, 938, 944, 945, 947, 949, 950, 951, 952, 954, 955, 956, 957, 960, 961, 964, 965, 966, 967, 968, 969, 972, 975, 981, 982, 987, 991, 997, 1001, 1004, 1005, 1006, 1008, 1009, 1010, 1012, 1013, 1014, 1015, 1016, 1018, 1021, 1022, 1023, 1024, 1025, 1033, 1038, 1040, 1048, 1050, 1052, 1053, 1059, 1063, 1064, 1068, 1070, 1071, 1072, 1074, 1075, 1076, 1079, 1080, 1084, 1087, 1088, 1089, 1092, 1095, 1096, 1099, 1105, 1106, 1108, 1109, 1110, 1111, 1113, 1114, 1116, 1118, 1119, 1120, 1121, 1122, 1123, 1126, 1130, 1131, 1132, 1133, 1134, 1135, 1136, 1139, 1140, 1143, 1144, 1147, 1148, 1149, 1151, 1152, 1153, 1156, 1157, 1159, 1160, 1161, 1162, 1163, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1184, 1185, 1186, 1196], "intern": [0, 144, 1103, 1110, 1170], "oak": [0, 1, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 236, 237, 238, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 332, 333, 334, 335, 336, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 713, 714, 719, 720, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 828, 829, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 916, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1104, 1106, 1107, 1109, 1113, 1115, 1118, 1119, 1120, 1121, 1122, 1123, 1129, 1131, 1133, 1134, 1135, 1136, 1137, 1138, 1139, 1140, 1141, 1142, 1144, 1146, 1151, 1159, 1161, 1169, 1180, 1184, 1186], "develop": [0, 1102, 1103, 1105, 1107, 1109, 1110, 1116, 1120, 1121, 1126, 1129, 1133, 1135, 1138, 1140, 1143, 1174], "need": [0, 1, 204, 1102, 1106, 1110, 1111, 1116, 1122, 1132, 1138, 1143, 1152, 1161, 1166, 1184, 1196], "preced": [0, 406, 424, 440, 1175], "poetri": [0, 1126, 1129, 1131, 1180], "shell": 0, "The": [0, 1, 2, 3, 4, 9, 14, 15, 17, 21, 22, 23, 25, 30, 31, 36, 39, 40, 41, 42, 43, 46, 52, 54, 55, 66, 67, 68, 69, 70, 73, 74, 75, 76, 77, 79, 84, 86, 87, 88, 89, 91, 92, 95, 96, 100, 105, 106, 111, 112, 118, 119, 121, 122, 124, 125, 126, 127, 128, 129, 131, 132, 133, 134, 135, 140, 147, 148, 150, 155, 156, 157, 165, 167, 168, 170, 171, 172, 173, 174, 175, 177, 179, 180, 181, 182, 183, 184, 187, 188, 189, 191, 192, 193, 195, 196, 197, 199, 200, 201, 209, 214, 216, 217, 218, 219, 223, 225, 232, 234, 236, 237, 238, 239, 241, 244, 245, 246, 247, 249, 257, 262, 263, 266, 272, 275, 281, 294, 302, 307, 308, 311, 322, 323, 325, 326, 328, 335, 372, 376, 381, 383, 384, 388, 391, 394, 395, 396, 397, 399, 400, 405, 407, 408, 409, 411, 413, 414, 415, 420, 421, 425, 426, 428, 437, 439, 440, 447, 451, 455, 461, 463, 478, 496, 518, 519, 541, 616, 684, 690, 691, 696, 697, 698, 701, 702, 720, 728, 729, 730, 731, 738, 740, 751, 757, 758, 765, 768, 775, 783, 784, 786, 796, 797, 806, 807, 824, 831, 833, 834, 839, 843, 845, 885, 923, 929, 934, 935, 940, 942, 944, 956, 960, 961, 962, 968, 969, 977, 981, 983, 984, 989, 991, 992, 1004, 1007, 1011, 1022, 1035, 1038, 1041, 1042, 1043, 1050, 1055, 1063, 1065, 1070, 1071, 1072, 1074, 1080, 1084, 1089, 1092, 1096, 1102, 1105, 1107, 1108, 1109, 1110, 1111, 1112, 1115, 1117, 1118, 1119, 1120, 1121, 1122, 1126, 1127, 1129, 1130, 1131, 1132, 1133, 1134, 1135, 1138, 1139, 1140, 1143, 1144, 1146, 1148, 1152, 1159, 1166, 1169, 1170, 1171, 1172, 1174, 1175, 1179, 1180, 1181, 1184, 1185, 1186, 1196, 1197], "structur": [0, 1, 155, 165, 440, 451, 720, 738, 1064, 1102, 1109, 1110, 1114, 1116, 1118, 1120, 1132, 1148, 1185], "i": [0, 1, 2, 3, 4, 17, 22, 23, 24, 28, 31, 36, 41, 42, 44, 46, 49, 50, 51, 53, 56, 61, 68, 71, 72, 83, 86, 89, 95, 115, 117, 123, 127, 142, 144, 149, 155, 161, 163, 165, 166, 169, 175, 178, 184, 190, 193, 203, 204, 214, 215, 219, 225, 227, 229, 234, 235, 236, 238, 251, 276, 281, 282, 296, 313, 318, 329, 335, 337, 354, 356, 375, 376, 384, 387, 389, 391, 392, 396, 397, 399, 403, 405, 408, 416, 418, 421, 422, 423, 427, 428, 431, 433, 434, 435, 436, 438, 439, 440, 443, 444, 445, 446, 449, 450, 451, 453, 455, 456, 457, 458, 459, 465, 466, 469, 471, 474, 475, 476, 478, 479, 483, 485, 491, 506, 510, 512, 515, 524, 529, 533, 535, 538, 543, 544, 545, 548, 550, 581, 599, 616, 696, 701, 705, 720, 723, 738, 740, 742, 746, 764, 768, 771, 774, 783, 784, 788, 830, 843, 845, 846, 885, 942, 944, 945, 947, 949, 950, 952, 953, 954, 955, 956, 957, 958, 959, 962, 963, 964, 965, 968, 969, 971, 972, 981, 991, 992, 997, 1004, 1022, 1038, 1043, 1052, 1053, 1059, 1063, 1064, 1065, 1066, 1068, 1070, 1071, 1072, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1085, 1087, 1088, 1089, 1090, 1091, 1093, 1094, 1095, 1096, 1099, 1106, 1109, 1110, 1111, 1113, 1114, 1116, 1117, 1118, 1119, 1121, 1122, 1123, 1126, 1127, 1131, 1132, 1133, 1134, 1135, 1136, 1137, 1138, 1139, 1140, 1143, 1144, 1146, 1148, 1151, 1152, 1154, 1156, 1157, 1159, 1161, 1162, 1163, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1186, 1188, 1196, 1197], "input": [0, 2, 326, 335, 1102, 1108, 1109, 1111, 1113, 1118, 1119, 1120, 1122, 1129, 1132, 1133, 1139, 1146, 1148, 1157, 1159, 1161, 1166, 1169, 1170, 1171, 1172, 1175, 1176, 1180, 1184, 1186], "handl": [0, 1, 831, 843, 845, 885, 1112, 1117, 1118, 1132], "arg": [0, 1169, 1172, 1175, 1180, 1184, 1197], "AND": [0, 679, 942, 958, 959, 1152, 1154, 1156], "option": [0, 1, 214, 281, 282, 337, 696, 740, 1105, 1106, 1111, 1113, 1116, 1121, 1122, 1127, 1129, 1132, 1136, 1138, 1139, 1145, 1148, 1151, 1152, 1154, 1156, 1157, 1161, 1162, 1164, 1169, 1170, 1175, 1176, 1181, 1186, 1196], "valu": [0, 1, 3, 4, 5, 14, 15, 17, 20, 21, 22, 23, 24, 25, 46, 61, 76, 80, 93, 94, 95, 96, 105, 106, 112, 127, 128, 129, 130, 131, 136, 147, 148, 155, 157, 159, 165, 205, 214, 215, 217, 218, 219, 223, 225, 234, 236, 247, 251, 252, 253, 262, 263, 264, 265, 266, 267, 271, 272, 281, 296, 297, 298, 307, 308, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 323, 325, 326, 335, 375, 376, 377, 383, 384, 385, 387, 388, 389, 391, 392, 394, 395, 396, 397, 399, 405, 406, 408, 411, 413, 414, 415, 420, 423, 425, 436, 440, 441, 443, 446, 453, 458, 468, 470, 475, 476, 478, 479, 482, 483, 484, 485, 486, 487, 488, 489, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 512, 515, 518, 519, 524, 525, 529, 533, 535, 536, 538, 539, 540, 541, 543, 544, 545, 548, 616, 678, 680, 690, 691, 695, 696, 698, 699, 702, 720, 746, 747, 757, 758, 764, 765, 767, 768, 769, 783, 816, 817, 818, 819, 820, 827, 828, 830, 831, 833, 834, 838, 839, 841, 842, 843, 845, 850, 852, 858, 859, 860, 863, 864, 865, 871, 872, 873, 876, 877, 879, 885, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 901, 902, 907, 912, 914, 915, 918, 924, 934, 935, 939, 940, 942, 943, 944, 945, 956, 960, 973, 981, 983, 984, 989, 991, 992, 993, 994, 1004, 1030, 1031, 1038, 1041, 1042, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1055, 1058, 1061, 1062, 1063, 1070, 1076, 1087, 1096, 1103, 1110, 1116, 1126, 1132, 1167, 1170, 1171, 1172, 1177, 1178, 1179, 1183, 1185], "which": [0, 1, 3, 4, 17, 22, 28, 41, 46, 86, 89, 115, 161, 204, 227, 276, 329, 389, 397, 408, 418, 440, 467, 550, 696, 697, 698, 705, 720, 730, 734, 771, 831, 842, 843, 845, 846, 878, 885, 900, 910, 944, 947, 956, 968, 969, 997, 1038, 1059, 1063, 1064, 1070, 1080, 1089, 1102, 1103, 1105, 1109, 1110, 1111, 1112, 1113, 1114, 1116, 1117, 1118, 1121, 1122, 1126, 1127, 1129, 1132, 1135, 1143, 1144, 1148, 1161, 1166, 1167, 1170, 1174, 1177, 1180, 1184, 1185, 1186, 1196], "can": [0, 1, 2, 23, 46, 61, 76, 142, 219, 225, 232, 275, 281, 313, 328, 335, 348, 392, 408, 409, 440, 451, 510, 513, 514, 530, 553, 587, 601, 603, 604, 609, 616, 696, 697, 720, 819, 884, 885, 996, 1004, 1102, 1106, 1107, 1109, 1110, 1111, 1112, 1113, 1115, 1116, 1117, 1118, 1119, 1120, 1121, 1126, 1127, 1129, 1132, 1133, 1134, 1136, 1138, 1139, 1140, 1143, 1144, 1148, 1159, 1162, 1163, 1164, 1166, 1167, 1170, 1174, 1175, 1183, 1185, 1186, 1196, 1197], "short": [0, 1112, 1132, 1170], "specifi": [0, 335, 339, 340, 431, 440, 696, 710, 712, 713, 719, 720, 721, 722, 723, 725, 734, 740, 742, 942, 956, 958, 959, 962, 1064, 1103, 1105, 1109, 1111, 1116, 1118, 1119, 1120, 1121, 1126, 1129, 1132, 1134, 1138, 1139, 1148, 1157, 1162, 1164, 1166, 1170, 1171, 1176, 1177, 1180, 1182, 1185, 1186, 1196, 1197], "adapt": [0, 1102, 1103, 1105, 1108, 1109, 1110, 1112, 1113, 1117, 1118, 1119, 1120, 1121, 1123, 1129, 1130, 1132, 1133, 1134, 1138, 1140, 1143, 1144, 1155, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1179, 1180, 1182, 1184, 1185], "selector": [0, 1102, 1103, 1105, 1109, 1112, 1120, 1121, 1123, 1130, 1132, 1138, 1152, 1154, 1156, 1157, 1159, 1161, 1163, 1164, 1166, 1167, 1168], "document": [0, 14, 15, 25, 105, 106, 112, 147, 148, 157, 217, 218, 223, 262, 263, 272, 307, 308, 323, 392, 394, 395, 411, 438, 440, 446, 456, 518, 519, 541, 690, 691, 702, 757, 758, 765, 833, 834, 839, 934, 935, 940, 983, 984, 989, 1041, 1042, 1055, 1103, 1104, 1105, 1108, 1109, 1110, 1121, 1129, 1132, 1133, 1134, 1135, 1139, 1143, 1147, 1148, 1149, 1155, 1197], "ubergraph": [0, 1106, 1109, 1113, 1114, 1119, 1120, 1131, 1139, 1143, 1144, 1155, 1165, 1168, 1174, 1180, 1182, 1186], "fbbt": [0, 1132, 1136], "obo": [0, 1, 391, 392, 397, 399, 403, 405, 413, 415, 416, 421, 427, 439, 440, 456, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 939, 942, 943, 945, 955, 956, 1038, 1063, 1096, 1102, 1103, 1104, 1106, 1109, 1111, 1112, 1113, 1114, 1115, 1117, 1118, 1119, 1120, 1121, 1122, 1123, 1126, 1130, 1131, 1133, 1134, 1136, 1138, 1140, 1143, 1144, 1151, 1155, 1156, 1159, 1166, 1167, 1168, 1170, 1171, 1172, 1174, 1175, 1176, 1180, 1184, 1186, 1196], "cl": [0, 942, 956, 1102, 1103, 1107, 1108, 1109, 1113, 1126, 1132, 1133, 1138, 1140, 1156, 1167, 1169, 1180, 1184, 1186], "db": [0, 1108, 1127, 1138, 1139, 1151, 1166, 1169, 1170, 1176, 1180, 1186, 1196], "sqlite": [0, 1102, 1103, 1105, 1106, 1107, 1110, 1111, 1116, 1117, 1118, 1120, 1121, 1123, 1126, 1130, 1131, 1132, 1133, 1134, 1139, 1140, 1143, 1144, 1148, 1151, 1156, 1166, 1170, 1172, 1173, 1174, 1175, 1176, 1179, 1180, 1182, 1185, 1196], "It": [0, 1, 405, 408, 440, 455, 720, 738, 1102, 1103, 1105, 1109, 1110, 1112, 1116, 1117, 1118, 1119, 1121, 1126, 1132, 1143, 1167, 1170, 1180], "us": [0, 1, 3, 4, 19, 23, 24, 31, 36, 46, 91, 95, 109, 149, 153, 155, 165, 204, 214, 215, 219, 222, 225, 229, 230, 236, 242, 252, 264, 265, 266, 267, 270, 271, 275, 279, 281, 287, 297, 309, 310, 311, 312, 313, 317, 318, 319, 321, 325, 326, 328, 333, 335, 352, 376, 383, 385, 387, 388, 389, 391, 392, 396, 397, 399, 402, 405, 406, 409, 413, 414, 415, 420, 421, 440, 441, 456, 479, 482, 483, 487, 488, 491, 492, 510, 513, 514, 515, 521, 522, 523, 524, 525, 529, 530, 534, 535, 536, 538, 539, 543, 545, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 585, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 623, 626, 628, 638, 649, 650, 655, 658, 660, 661, 667, 668, 669, 671, 680, 694, 696, 698, 719, 720, 721, 740, 746, 763, 767, 768, 816, 818, 820, 827, 828, 837, 838, 842, 845, 885, 938, 939, 942, 943, 944, 987, 991, 992, 994, 996, 1004, 1011, 1031, 1038, 1046, 1048, 1050, 1053, 1058, 1061, 1063, 1070, 1071, 1072, 1076, 1079, 1080, 1087, 1088, 1089, 1096, 1106, 1107, 1109, 1111, 1112, 1113, 1114, 1115, 1117, 1118, 1119, 1121, 1122, 1123, 1129, 1130, 1131, 1133, 1134, 1135, 1136, 1138, 1139, 1140, 1143, 1144, 1145, 1146, 1148, 1151, 1152, 1154, 1156, 1157, 1158, 1159, 1161, 1162, 1163, 1164, 1166, 1167, 1170, 1171, 1172, 1173, 1176, 1177, 1178, 1180, 1182, 1183, 1184, 1185, 1186, 1195, 1196], "creat": [0, 2, 39, 40, 46, 479, 483, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 571, 616, 653, 1110, 1116, 1119, 1123, 1131, 1132, 1139, 1147, 1149, 1163, 1166, 1170, 1171, 1175, 1178], "individu": [0, 1, 313, 319, 331, 335, 341, 346, 347, 348, 353, 354, 357, 364, 365, 367, 371, 383, 387, 400, 405, 440, 447, 455, 512, 513, 514, 530, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 628, 638, 649, 650, 658, 661, 667, 668, 669, 671, 696, 698, 720, 726, 728, 729, 730, 731, 732, 735, 740, 741, 764, 783, 845, 852, 885, 886, 895, 944, 949, 950, 951, 952, 954, 956, 960, 961, 964, 965, 966, 967, 968, 969, 972, 981, 991, 1001, 1004, 1005, 1006, 1008, 1009, 1010, 1012, 1013, 1014, 1015, 1016, 1018, 1021, 1022, 1023, 1024, 1025, 1050, 1053, 1063, 1070, 1071, 1072, 1074, 1076, 1079, 1080, 1084, 1087, 1088, 1089, 1092, 1096, 1109, 1112, 1121, 1123, 1144, 1145, 1170, 1176, 1184], "For": [0, 1, 155, 165, 204, 219, 225, 234, 235, 698, 720, 735, 828, 830, 831, 843, 845, 866, 885, 904, 944, 956, 972, 1038, 1063, 1096, 1102, 1103, 1105, 1108, 1109, 1110, 1111, 1112, 1113, 1114, 1115, 1116, 1118, 1119, 1120, 1121, 1122, 1126, 1127, 1132, 1133, 1134, 1135, 1136, 1138, 1139, 1144, 1148, 1163, 1170, 1172, 1173, 1174, 1175, 1177, 1179, 1180, 1182, 1184, 1185, 1196, 1197], "alia": [0, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 219, 225, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 264, 265, 266, 267, 271, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 482, 483, 488, 491, 492, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 521, 522, 523, 524, 525, 530, 533, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 680, 695, 696, 697, 698, 699, 707, 708, 709, 710, 711, 712, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 882, 883, 884, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1058, 1061, 1062, 1063, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1103, 1107, 1110, 1112, 1132, 1170, 1175, 1180, 1186, 1196], "uberon": [0, 942, 956, 1103, 1109, 1110, 1113, 1119, 1120, 1121, 1126, 1127, 1132, 1134, 1138, 1143, 1152, 1159, 1167, 1169, 1170, 1174, 1175, 1180, 1186], "obi": [0, 95, 128, 479, 483, 488, 491, 506, 508, 509, 510, 512, 513, 514, 515, 524, 533, 538, 543, 544, 548, 578, 579, 581, 587, 628, 668, 1103, 1138, 1140, 1163, 1166, 1170], "further": [0, 1112, 1114, 1120], "implement": [0, 1, 992, 1011, 1102, 1105, 1109, 1112, 1114, 1119, 1120, 1123, 1126, 1127, 1130, 1132, 1133, 1136, 1138, 1139, 1144, 1146, 1148, 1151, 1152, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1163, 1164, 1165, 1166, 1168, 1170, 1172, 1174, 1176, 1177, 1180, 1182, 1183, 1184, 1185, 1186], "aggreg": [0, 3, 4, 17, 21, 22, 30, 46, 1114, 1132, 1155, 1168], "wrap": [0, 1121, 1138, 1151, 1153, 1156, 1160, 1162, 1165, 1166, 1167, 1170, 1172, 1173, 1175, 1179, 1180, 1182, 1183, 1185], "multiplex": 0, "over": [0, 1, 265, 280, 281, 287, 310, 334, 335, 352, 397, 427, 521, 522, 523, 696, 697, 720, 734, 738, 1106, 1109, 1110, 1115, 1116, 1119, 1120, 1121, 1126, 1132, 1140, 1143, 1144, 1169, 1170, 1171, 1176, 1180, 1184, 1185], "differ": [0, 1, 4, 142, 155, 159, 163, 165, 168, 169, 170, 172, 173, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 195, 196, 200, 201, 204, 408, 440, 443, 446, 453, 475, 476, 478, 783, 803, 1102, 1103, 1105, 1109, 1111, 1112, 1114, 1115, 1117, 1119, 1120, 1126, 1127, 1132, 1134, 1135, 1139, 1140, 1143, 1146, 1167, 1168, 1174, 1180, 1183, 1184, 1185, 1186, 1196], "endpoint": [0, 1105, 1109, 1132, 1133, 1140, 1143, 1144, 1152, 1158, 1159, 1160, 1165, 1167, 1176, 1180, 1184], "mani": [0, 1, 150, 1102, 1103, 1109, 1110, 1111, 1112, 1113, 1116, 1117, 1119, 1120, 1121, 1123, 1127, 1132, 1135, 1143, 1159, 1170, 1175], "take": [0, 1102, 1103, 1106, 1109, 1110, 1113, 1116, 1121, 1126, 1132, 1133, 1143, 1175, 1197], "primari": [0, 3, 4, 17, 21, 22, 46, 79, 1109, 1110, 1112, 1113, 1114, 1117, 1130, 1196], "argument": [0, 1103, 1105, 1121, 1132, 1145, 1148, 1152, 1154, 1156, 1169, 1170, 1173, 1186], "These": [0, 1, 1102, 1103, 1109, 1110, 1112, 1113, 1116, 1118, 1120, 1121, 1132, 1140, 1143, 1184, 1196], "typic": [0, 1, 31, 46, 214, 229, 236, 275, 328, 396, 397, 437, 440, 463, 942, 956, 996, 1103, 1105, 1109, 1110, 1111, 1112, 1113, 1116, 1121, 1135, 1143, 1148, 1169, 1170, 1180], "one": [0, 1, 2, 4, 36, 142, 150, 155, 163, 165, 166, 168, 169, 170, 172, 173, 177, 178, 179, 182, 183, 186, 187, 188, 190, 191, 195, 196, 200, 201, 204, 384, 440, 479, 483, 488, 491, 511, 512, 515, 524, 533, 536, 538, 543, 544, 548, 563, 696, 720, 725, 768, 774, 845, 892, 939, 943, 1103, 1108, 1109, 1111, 1113, 1114, 1116, 1119, 1120, 1121, 1123, 1126, 1127, 1132, 1135, 1137, 1138, 1143, 1144, 1145, 1147, 1149, 1152, 1155, 1169, 1170, 1172, 1175, 1177, 1185, 1196, 1197], "0000955": [0, 1117], "syntax": [0, 14, 15, 25, 105, 106, 112, 147, 148, 157, 214, 217, 218, 223, 229, 262, 263, 272, 307, 308, 323, 391, 394, 395, 399, 403, 411, 413, 415, 416, 421, 439, 479, 483, 491, 509, 512, 515, 518, 519, 524, 533, 536, 538, 541, 543, 544, 548, 567, 572, 690, 691, 696, 701, 702, 720, 740, 757, 758, 765, 833, 834, 839, 934, 935, 940, 983, 984, 989, 1041, 1042, 1055, 1103, 1105, 1108, 1109, 1112, 1126, 1132, 1151, 1168, 1170, 1173, 1180], "either": [0, 4, 8, 46, 50, 99, 127, 139, 165, 208, 236, 256, 281, 301, 335, 375, 376, 380, 383, 384, 385, 387, 388, 391, 392, 396, 399, 403, 406, 408, 414, 420, 440, 446, 495, 506, 616, 683, 720, 746, 750, 783, 788, 823, 885, 928, 945, 956, 976, 1004, 1034, 1070, 1108, 1109, 1110, 1116, 1119, 1121, 1127, 1132, 1166, 1170, 1175, 1186, 1197], "exact": [0, 409, 410, 488, 845, 892, 943, 1110, 1152, 1180], "match": [0, 142, 155, 163, 165, 167, 181, 184, 187, 188, 189, 190, 193, 195, 196, 197, 199, 313, 319, 325, 331, 335, 341, 346, 347, 348, 353, 354, 357, 359, 364, 365, 367, 371, 479, 483, 488, 491, 498, 507, 512, 515, 524, 533, 538, 543, 544, 548, 558, 562, 574, 591, 616, 633, 638, 696, 698, 701, 710, 713, 720, 723, 726, 728, 729, 730, 731, 741, 746, 783, 792, 981, 991, 992, 1003, 1004, 1022, 1064, 1103, 1116, 1120, 1121, 1126, 1129, 1132, 1140, 1152, 1161, 1169, 1170, 1175, 1177, 1180, 1183, 1184, 1197], "limb": [0, 1120, 1175, 1180], "plasma": 0, "membran": [0, 1120, 1162, 1169, 1170, 1171, 1184], "compound": 0, "t": [0, 1, 2, 204, 942, 956, 981, 991, 1004, 1064, 1102, 1106, 1107, 1109, 1111, 1112, 1113, 1116, 1117, 1120, 1121, 1122, 1126, 1129, 1132, 1138, 1140, 1143, 1152, 1161, 1166, 1170, 1181, 1186, 1196, 1197], "find": [0, 1102, 1106, 1119, 1132, 1169, 1175, 1182, 1184, 1185], "partial": [0, 1110, 1153, 1158, 1168, 1180], "fed": 0, "assum": [0, 701, 1119, 1120, 1121, 1132, 1133, 1139, 1159, 1163, 1166, 1170, 1182, 1186], "abov": [0, 1, 155, 165, 1105, 1116, 1118, 1120, 1121, 1126, 1132, 1133, 1138, 1159, 1170, 1196], "look": [0, 1112, 1114, 1116, 1120, 1129, 1132, 1133, 1170, 1176], "up": [0, 2, 1108, 1109, 1114, 1116, 1120, 1126, 1132, 1133, 1170, 1176, 1182, 1184, 1186], "two": [0, 4, 20, 30, 33, 34, 36, 46, 47, 48, 49, 50, 51, 54, 55, 56, 57, 58, 59, 60, 62, 63, 64, 65, 69, 70, 71, 72, 79, 81, 82, 83, 84, 86, 90, 91, 387, 440, 446, 450, 453, 465, 513, 514, 530, 533, 539, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 583, 585, 586, 587, 589, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 619, 620, 623, 624, 626, 627, 628, 638, 649, 650, 652, 655, 658, 660, 661, 666, 667, 668, 669, 671, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 783, 786, 794, 795, 796, 797, 798, 799, 800, 802, 805, 806, 807, 808, 809, 810, 845, 857, 885, 1103, 1105, 1109, 1112, 1116, 1117, 1119, 1120, 1121, 1133, 1136, 1138, 1165, 1166, 1170, 1171, 1172, 1177], "hand": [0, 142, 165, 1109, 1110, 1112, 1116, 1120, 1132, 1135, 1176, 1180], "foot": [0, 1120], "equival": [0, 384, 388, 391, 435, 440, 446, 448, 461, 474, 845, 880, 885, 1110, 1116, 1118, 1120, 1170], "0002398": [0, 1120, 1159, 1180], "0002397": 0, "shorten": [0, 1109], "p": [0, 21, 45, 46, 94, 95, 127, 128, 129, 130, 387, 440, 1111, 1116, 1120, 1121, 1122, 1126, 1132, 1133, 1136, 1148, 1156, 1159, 1162, 1170, 1171, 1179], "aka": [0, 1109, 1120, 1170, 1186], "type": [0, 1, 3, 4, 17, 20, 21, 22, 23, 24, 41, 43, 76, 77, 94, 95, 96, 155, 159, 184, 190, 193, 204, 214, 215, 219, 225, 229, 234, 251, 252, 264, 265, 266, 267, 271, 275, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 328, 359, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 400, 405, 406, 408, 413, 414, 415, 420, 446, 449, 450, 453, 465, 468, 476, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 512, 515, 524, 525, 529, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 601, 603, 604, 609, 628, 631, 665, 680, 695, 696, 698, 699, 746, 764, 767, 768, 769, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 919, 939, 942, 943, 944, 945, 955, 957, 960, 964, 981, 991, 992, 993, 994, 996, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1058, 1061, 1062, 1063, 1064, 1072, 1073, 1087, 1097, 1103, 1109, 1110, 1111, 1112, 1117, 1118, 1119, 1120, 1121, 1126, 1127, 1132, 1135, 1140, 1151, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1176, 1179, 1186, 1196, 1197], "filter": [0, 845, 850, 852, 858, 859, 860, 863, 864, 871, 872, 873, 876, 877, 879, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 901, 902, 914, 915, 918, 1120, 1169, 1170, 1171, 1175, 1176, 1177], "comma": [0, 1103, 1122], "delimit": [0, 1184], "space": [0, 275, 328, 996, 1132, 1175], "biolog": [0, 1, 31, 46, 1109, 1112, 1118, 1134, 1176], "is_a": [0, 3, 4, 17, 20, 39, 52, 54, 55, 56, 62, 64, 69, 70, 72, 142, 175, 193, 266, 267, 311, 312, 376, 383, 384, 385, 388, 396, 406, 414, 420, 479, 483, 486, 488, 491, 492, 498, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 524, 525, 530, 533, 536, 538, 539, 540, 543, 544, 545, 548, 552, 554, 555, 556, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 591, 592, 594, 595, 596, 598, 599, 600, 601, 602, 603, 604, 606, 607, 611, 612, 613, 618, 619, 628, 629, 630, 634, 635, 636, 637, 638, 646, 647, 648, 649, 650, 652, 654, 655, 657, 661, 662, 663, 664, 665, 667, 668, 669, 671, 673, 675, 676, 768, 769, 775, 780, 781, 784, 785, 786, 797, 801, 802, 807, 811, 812, 814, 827, 830, 831, 841, 845, 850, 851, 852, 858, 863, 864, 871, 872, 873, 876, 880, 886, 889, 893, 895, 896, 897, 899, 901, 902, 906, 908, 911, 912, 914, 918, 919, 939, 942, 943, 1031, 1038, 1043, 1046, 1050, 1051, 1062, 1063, 1102, 1103, 1109, 1120, 1122, 1132, 1134, 1148, 1159, 1169, 1170, 1176, 1179], "rdf": [0, 1, 3, 4, 6, 17, 22, 23, 24, 25, 28, 37, 44, 61, 76, 86, 97, 112, 115, 137, 144, 157, 161, 167, 181, 184, 199, 206, 214, 223, 225, 227, 254, 272, 276, 299, 323, 329, 376, 378, 383, 387, 391, 397, 399, 400, 408, 411, 413, 414, 415, 418, 420, 427, 444, 450, 453, 465, 475, 478, 479, 483, 488, 491, 492, 493, 508, 509, 511, 512, 515, 524, 525, 533, 536, 538, 540, 541, 543, 544, 545, 548, 550, 554, 555, 556, 563, 585, 611, 616, 620, 628, 655, 658, 664, 671, 681, 697, 702, 705, 748, 765, 767, 771, 787, 816, 821, 839, 845, 846, 885, 888, 907, 908, 926, 939, 940, 942, 943, 944, 945, 947, 957, 960, 968, 969, 974, 989, 997, 1032, 1055, 1059, 1103, 1105, 1107, 1109, 1110, 1112, 1113, 1118, 1119, 1120, 1127, 1132, 1133, 1134, 1138, 1139, 1140, 1148, 1162, 1166, 1170, 1186], "subclassof": [0, 387, 389, 391, 434, 440, 491, 492, 538, 540, 616, 631, 1103, 1105, 1109, 1111, 1113, 1120, 1121, 1132, 1133, 1134, 1138, 1140, 1148, 1162, 1166, 1170, 1177, 1179], "part_of": [0, 1103, 1120, 1169, 1176], "bfo": [0, 1, 1103, 1109, 1116, 1120, 1132, 1138, 1162, 1170], "0000050": [0, 1103, 1109, 1110, 1116, 1120, 1132, 1138, 1162, 1170], "so": [0, 2, 1105, 1106, 1110, 1116, 1118, 1120, 1126, 1132, 1135, 1138, 1143, 1152, 1161, 1163, 1174, 1175, 1182, 1186], "interfac": [0, 1, 2, 204, 1105, 1106, 1107, 1109, 1110, 1112, 1115, 1117, 1118, 1119, 1120, 1121, 1123, 1126, 1130, 1131, 1132, 1133, 1134, 1139, 1140, 1144, 1151, 1152, 1155, 1158, 1159, 1161, 1162, 1165, 1166, 1168, 1179, 1182, 1183, 1186, 1195, 1196, 1197], "understand": [0, 1, 214, 229, 1106, 1109, 1112, 1113, 1132, 1196], "shortcut": [0, 1103], "e": [0, 1, 3, 4, 17, 22, 42, 46, 50, 53, 55, 70, 71, 318, 356, 387, 391, 392, 397, 405, 406, 420, 423, 424, 440, 446, 447, 454, 455, 456, 720, 738, 845, 875, 885, 891, 944, 956, 960, 1038, 1063, 1096, 1103, 1105, 1109, 1110, 1111, 1118, 1120, 1121, 1129, 1132, 1140, 1143, 1148, 1151, 1159, 1162, 1167, 1169, 1170, 1172, 1173, 1175, 1177, 1179, 1180, 1182, 1185, 1186], "between": [0, 1, 2, 3, 4, 17, 22, 23, 30, 34, 36, 37, 41, 43, 46, 47, 48, 49, 50, 51, 53, 54, 55, 56, 61, 66, 67, 68, 69, 70, 71, 72, 76, 77, 79, 80, 82, 83, 84, 86, 87, 88, 89, 91, 92, 142, 155, 159, 163, 165, 168, 169, 170, 172, 173, 177, 178, 179, 182, 183, 184, 185, 186, 187, 188, 190, 191, 195, 196, 199, 200, 201, 214, 229, 387, 391, 392, 405, 434, 440, 446, 447, 450, 451, 453, 455, 456, 465, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 783, 786, 794, 795, 796, 797, 798, 799, 800, 802, 805, 806, 807, 808, 809, 810, 845, 857, 885, 942, 959, 1109, 1110, 1111, 1114, 1116, 1120, 1130, 1135, 1145, 1146, 1161, 1169, 1170, 1172, 1176, 1181, 1186], "name": [0, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 156, 159, 163, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 231, 232, 233, 234, 235, 236, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 281, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 328, 331, 332, 333, 334, 335, 336, 341, 342, 343, 344, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 400, 405, 406, 407, 408, 409, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 498, 500, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 520, 521, 522, 523, 524, 525, 529, 530, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 679, 680, 688, 695, 696, 697, 698, 699, 701, 707, 708, 709, 710, 711, 712, 713, 714, 719, 720, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 746, 764, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 882, 883, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 925, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 996, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1054, 1058, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1105, 1108, 1109, 1110, 1113, 1116, 1118, 1119, 1120, 1129, 1132, 1133, 1139, 1154, 1167, 1170, 1171, 1176, 1182, 1186, 1196], "class": [0, 1, 2, 31, 93, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 204, 238, 400, 403, 431, 644, 865, 1102, 1109, 1110, 1111, 1112, 1116, 1118, 1120, 1121, 1129, 1135, 1146, 1147, 1148, 1149, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1168, 1169, 1170, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1186, 1191, 1193, 1196, 1197], "part": [0, 16, 46, 107, 127, 151, 165, 220, 236, 268, 281, 315, 335, 398, 440, 527, 616, 692, 720, 738, 759, 783, 835, 885, 936, 956, 985, 1004, 1045, 1070, 1102, 1103, 1105, 1109, 1112, 1116, 1118, 1120, 1121, 1126, 1128, 1130, 1131, 1161, 1170, 1196], "draw": [0, 1004, 1027], "subgraph": [0, 1159, 1176], "start": [0, 2, 506, 701, 842, 885, 910, 1106, 1109, 1120, 1129, 1130, 1131, 1170, 1176], "from": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 165, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 203, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 713, 714, 715, 716, 717, 718, 719, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1102, 1103, 1105, 1108, 1109, 1110, 1111, 1112, 1113, 1116, 1117, 1118, 1119, 1120, 1121, 1122, 1126, 1127, 1129, 1131, 1133, 1134, 1136, 1138, 1140, 1141, 1143, 1144, 1145, 1147, 1148, 1149, 1151, 1153, 1157, 1159, 1160, 1161, 1162, 1163, 1164, 1165, 1166, 1167, 1168, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1177, 1180, 1181, 1184, 1186, 1196, 1197], "trace": 0, "upward": 0, "through": [0, 696, 1061, 1070, 1083, 1109, 1115, 1126, 1129, 1133, 1138, 1186, 1196], "section": [0, 1103, 1107, 1109, 1112, 1115, 1116, 1126, 1132, 1133, 1136, 1169, 1170], "autogener": [0, 2], "inlin": [0, 3, 17, 22, 24, 32, 80, 85, 159, 185, 214, 215, 219, 237, 239, 240, 241, 265, 266, 280, 285, 287, 310, 311, 314, 334, 350, 352, 391, 392, 434, 438, 445, 449, 456, 466, 469, 769, 795, 800, 805, 810, 820, 830, 831, 843, 845, 849, 857, 859, 860, 866, 869, 877, 879, 890, 891, 892, 900, 904, 909, 915, 944, 969, 972, 993, 999, 1051, 1052, 1061, 1062, 1085, 1097], "doc": [0, 2, 203, 250, 391, 399, 403, 413, 415, 416, 421, 439, 1109, 1126, 1127, 1132, 1138, 1182, 1197], "should": [0, 2, 14, 15, 21, 22, 25, 78, 105, 106, 112, 147, 148, 157, 217, 218, 223, 251, 262, 263, 272, 296, 307, 308, 323, 375, 391, 394, 395, 397, 399, 408, 411, 413, 415, 421, 427, 444, 479, 485, 488, 498, 506, 508, 512, 515, 518, 519, 524, 538, 541, 544, 545, 578, 628, 690, 691, 696, 702, 710, 720, 757, 758, 764, 765, 833, 834, 839, 843, 845, 892, 934, 935, 939, 940, 943, 945, 983, 984, 989, 1041, 1042, 1052, 1053, 1055, 1064, 1106, 1108, 1109, 1110, 1111, 1113, 1114, 1116, 1119, 1126, 1129, 1132, 1138, 1170, 1172, 1173, 1175, 1179, 1180, 1182, 1185, 1196], "get": [0, 1, 1105, 1106, 1110, 1113, 1116, 1117, 1118, 1120, 1127, 1130, 1131, 1152, 1170, 1175, 1176, 1177, 1183, 1186, 1196], "same": [0, 1, 2, 4, 142, 155, 165, 166, 169, 175, 178, 845, 892, 944, 956, 964, 968, 1109, 1110, 1113, 1117, 1119, 1120, 1122, 1126, 1132, 1134, 1140, 1143, 1144, 1169, 1170, 1186], "result": [0, 1, 21, 45, 95, 96, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 131, 132, 134, 135, 155, 159, 164, 165, 176, 194, 204, 696, 698, 699, 720, 725, 726, 728, 729, 730, 731, 732, 735, 738, 741, 992, 993, 999, 1003, 1004, 1027, 1038, 1043, 1050, 1051, 1052, 1058, 1061, 1062, 1063, 1065, 1066, 1068, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1084, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1099, 1105, 1108, 1109, 1116, 1120, 1121, 1126, 1127, 1130, 1139, 1144, 1151, 1169, 1170, 1171, 1172, 1173, 1175, 1179, 1180, 1182, 1184, 1185, 1197], "help": [0, 1106, 1110, 1112, 1127, 1132, 1196], "oaklib": [0, 1102, 1108, 1110, 1113, 1117, 1118, 1119, 1120, 1123, 1126, 1129, 1132, 1133, 1134, 1138, 1140, 1143, 1144, 1145, 1146, 1147, 1148, 1149, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1163, 1164, 1165, 1166, 1167, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1186, 1197], "A": [0, 1, 2, 3, 4, 5, 10, 11, 12, 14, 15, 17, 18, 19, 20, 23, 24, 25, 26, 27, 30, 31, 32, 33, 34, 36, 37, 38, 42, 43, 46, 47, 48, 49, 50, 51, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 76, 77, 79, 80, 81, 82, 83, 84, 86, 87, 88, 89, 90, 91, 92, 93, 95, 96, 101, 102, 103, 105, 106, 108, 109, 112, 113, 114, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 131, 132, 133, 134, 135, 136, 141, 143, 144, 145, 147, 148, 149, 152, 153, 155, 157, 158, 159, 160, 163, 164, 165, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 205, 210, 211, 212, 214, 217, 218, 221, 222, 223, 224, 225, 226, 235, 236, 238, 248, 253, 258, 259, 260, 262, 263, 264, 267, 269, 270, 271, 272, 273, 274, 275, 278, 279, 281, 282, 283, 284, 286, 288, 289, 290, 291, 292, 293, 298, 303, 304, 305, 307, 308, 309, 312, 314, 316, 317, 319, 321, 322, 323, 324, 327, 328, 332, 333, 335, 337, 338, 339, 340, 341, 344, 345, 346, 347, 351, 355, 357, 358, 360, 362, 363, 364, 365, 366, 368, 370, 371, 375, 376, 377, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 394, 395, 396, 397, 399, 401, 402, 403, 405, 406, 408, 409, 411, 412, 414, 416, 417, 420, 421, 422, 423, 424, 427, 429, 430, 431, 433, 434, 435, 438, 439, 440, 441, 443, 444, 445, 446, 447, 448, 449, 451, 453, 455, 456, 457, 459, 461, 466, 467, 468, 469, 470, 471, 475, 476, 477, 478, 482, 483, 488, 489, 490, 497, 498, 499, 501, 505, 506, 507, 508, 509, 510, 511, 513, 514, 518, 519, 520, 526, 528, 530, 533, 534, 539, 541, 542, 543, 544, 547, 549, 553, 554, 555, 556, 557, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 576, 578, 579, 580, 581, 583, 585, 586, 587, 589, 590, 591, 592, 594, 595, 596, 597, 599, 600, 601, 602, 603, 604, 605, 606, 609, 610, 611, 612, 613, 615, 616, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 638, 640, 641, 649, 650, 651, 652, 655, 658, 660, 661, 663, 666, 667, 668, 669, 671, 674, 678, 685, 686, 687, 690, 691, 693, 694, 695, 696, 697, 702, 703, 704, 710, 712, 713, 714, 719, 720, 721, 722, 723, 725, 734, 738, 739, 740, 742, 743, 747, 752, 753, 754, 757, 758, 761, 763, 765, 766, 768, 769, 770, 774, 775, 776, 777, 778, 779, 780, 781, 783, 786, 794, 795, 796, 797, 798, 799, 800, 802, 805, 806, 807, 808, 809, 810, 817, 819, 825, 826, 829, 833, 834, 836, 837, 839, 840, 841, 844, 845, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 866, 869, 871, 872, 873, 875, 876, 877, 879, 880, 884, 885, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 900, 901, 902, 906, 908, 911, 912, 913, 914, 915, 918, 919, 923, 924, 930, 931, 932, 934, 935, 937, 938, 939, 940, 941, 942, 943, 946, 953, 955, 956, 957, 958, 959, 962, 963, 970, 971, 973, 978, 979, 980, 983, 984, 986, 987, 989, 990, 992, 993, 995, 996, 999, 1000, 1004, 1027, 1028, 1030, 1036, 1037, 1038, 1039, 1041, 1042, 1043, 1047, 1048, 1051, 1052, 1055, 1056, 1057, 1062, 1065, 1066, 1068, 1070, 1071, 1072, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1085, 1087, 1088, 1089, 1090, 1091, 1093, 1094, 1095, 1096, 1099, 1101, 1102, 1109, 1111, 1112, 1114, 1116, 1118, 1121, 1129, 1132, 1133, 1134, 1139, 1140, 1144, 1145, 1148, 1166, 1169, 1170, 1172, 1178, 1180, 1184, 1186], "subcommand": [0, 1103, 1105, 1108, 1180], "must": [0, 6, 14, 15, 25, 97, 105, 106, 112, 137, 147, 148, 157, 206, 217, 218, 223, 254, 262, 263, 272, 299, 307, 308, 313, 323, 335, 354, 378, 394, 395, 403, 411, 479, 483, 488, 491, 493, 498, 506, 508, 512, 515, 518, 519, 524, 533, 538, 541, 543, 544, 548, 566, 599, 606, 628, 668, 681, 690, 691, 701, 702, 748, 757, 758, 765, 821, 833, 834, 839, 926, 934, 935, 940, 942, 958, 959, 974, 983, 984, 989, 1032, 1041, 1042, 1055, 1064, 1108, 1132, 1138, 1166, 1170, 1175, 1176, 1186], "pass": [0, 215, 1061, 1070, 1083, 1109, 1110, 1111, 1118, 1121, 1127, 1132, 1136, 1139, 1145, 1148, 1161, 1169, 1173, 1175, 1185, 1186], "most": [0, 1, 21, 78, 376, 389, 397, 408, 414, 420, 478, 698, 735, 768, 774, 783, 1103, 1105, 1109, 1110, 1112, 1113, 1116, 1119, 1120, 1121, 1134, 1135, 1138, 1139, 1143, 1144, 1159, 1167, 1169, 1174, 1175, 1181], "requir": [0, 2, 20, 62, 64, 94, 95, 121, 130, 155, 168, 172, 177, 219, 225, 232, 264, 267, 284, 292, 309, 312, 345, 368, 391, 396, 399, 405, 413, 415, 428, 439, 455, 479, 483, 488, 491, 506, 508, 512, 515, 524, 525, 533, 536, 538, 543, 544, 548, 578, 611, 628, 698, 728, 746, 767, 768, 769, 778, 779, 782, 788, 804, 806, 816, 818, 819, 820, 828, 831, 838, 843, 845, 867, 939, 942, 943, 945, 955, 994, 1002, 1031, 1038, 1044, 1046, 1058, 1063, 1069, 1089, 1096, 1105, 1107, 1110, 1112, 1113, 1120, 1126, 1127, 1129, 1135, 1136, 1143, 1185], "specif": [0, 1, 2, 4, 10, 11, 12, 42, 46, 51, 95, 101, 102, 103, 123, 127, 141, 142, 143, 145, 165, 210, 211, 212, 214, 229, 236, 258, 259, 260, 281, 303, 304, 305, 325, 335, 382, 386, 390, 440, 497, 499, 501, 616, 685, 686, 687, 720, 752, 753, 754, 783, 825, 826, 829, 885, 930, 931, 932, 956, 978, 979, 980, 992, 1004, 1011, 1036, 1037, 1039, 1070, 1105, 1109, 1110, 1111, 1116, 1119, 1120, 1121, 1126, 1127, 1129, 1132, 1138, 1139, 1145, 1159, 1167, 1170, 1180, 1185, 1186], "ani": [0, 27, 42, 46, 111, 114, 127, 160, 165, 204, 219, 225, 226, 232, 236, 251, 266, 274, 281, 285, 296, 311, 327, 335, 350, 375, 408, 417, 440, 446, 479, 483, 488, 491, 498, 506, 512, 515, 524, 533, 538, 543, 544, 547, 548, 556, 566, 598, 616, 668, 697, 704, 720, 738, 770, 783, 844, 885, 946, 956, 995, 1004, 1053, 1057, 1070, 1104, 1106, 1107, 1108, 1109, 1110, 1111, 1112, 1113, 1114, 1116, 1117, 1120, 1121, 1122, 1126, 1129, 1132, 1134, 1135, 1138, 1140, 1143, 1145, 1148, 1152, 1158, 1159, 1162, 1165, 1166, 1169, 1170, 1171, 1172, 1176, 1177, 1178, 1180, 1182, 1183, 1184, 1196, 1197], "g": [0, 1, 4, 50, 55, 70, 71, 318, 356, 391, 392, 405, 406, 420, 440, 456, 720, 738, 845, 875, 891, 944, 960, 1038, 1063, 1096, 1105, 1109, 1110, 1111, 1116, 1118, 1120, 1121, 1129, 1143, 1148, 1151, 1159, 1162, 1167, 1169, 1170, 1172, 1173, 1175, 1179, 1180, 1182, 1185, 1186], "h": 0, "v": [0, 944, 964, 1127, 1138, 1170, 1181], "verbos": [0, 1132], "q": [0, 1161], "quiet": 0, "stacktrac": [0, 1103, 1120, 1126], "If": [0, 2, 4, 21, 42, 45, 46, 56, 72, 78, 155, 165, 184, 190, 193, 384, 403, 421, 440, 473, 696, 740, 768, 774, 942, 944, 952, 956, 965, 971, 992, 1003, 1004, 1103, 1108, 1112, 1116, 1118, 1120, 1121, 1122, 1126, 1129, 1132, 1133, 1136, 1138, 1143, 1144, 1145, 1148, 1161, 1166, 1169, 1170, 1171, 1173, 1175, 1176, 1178, 1184, 1186], "show": [0, 698, 720, 741, 1102, 1112, 1113, 1116, 1118, 1120, 1132, 1134, 1138, 1169, 1170, 1175], "full": [0, 696, 698, 720, 723, 726, 1103, 1105, 1113, 1117, 1122, 1132, 1134, 1143, 1159, 1176, 1183], "error": [0, 1054, 1106, 1116, 1122, 1127, 1148, 1175], "default": [0, 21, 78, 1058, 1061, 1070, 1086, 1105, 1108, 1109, 1110, 1114, 1116, 1117, 1119, 1120, 1122, 1126, 1138, 1148, 1159, 1170, 1171, 1173, 1174, 1176, 1184, 1185], "fals": [0, 3, 5, 21, 46, 78, 93, 95, 125, 127, 136, 165, 205, 214, 236, 239, 253, 281, 298, 313, 335, 348, 377, 440, 479, 483, 488, 489, 491, 508, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 567, 569, 572, 616, 628, 678, 720, 747, 769, 778, 779, 783, 817, 885, 924, 956, 973, 1004, 1030, 1070, 1120, 1122, 1148, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "save": [0, 1139, 1170, 1174, 1178], "save_a": 0, "mutat": [0, 1110, 1139], "where": [0, 1, 142, 387, 440, 696, 720, 723, 1038, 1043, 1064, 1065, 1066, 1068, 1070, 1071, 1072, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1087, 1088, 1089, 1090, 1091, 1093, 1094, 1095, 1096, 1099, 1102, 1106, 1109, 1110, 1112, 1113, 1114, 1116, 1117, 1118, 1119, 1121, 1122, 1126, 1143, 1148, 1170, 1175, 1177, 1179, 1181, 1183, 1195, 1196], "chang": [0, 4, 30, 31, 34, 36, 42, 46, 47, 48, 49, 50, 51, 54, 55, 56, 69, 70, 71, 72, 79, 82, 83, 84, 86, 91, 250, 845, 857, 885, 1050, 1108, 1109, 1111, 1116, 1121, 1122, 1126, 1130, 1131, 1132, 1138, 1143, 1148, 1169, 1170, 1172, 1178, 1186], "autosav": [0, 1139, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "determin": [0, 4, 21, 30, 36, 45, 46, 78, 79, 155, 165, 696, 697, 701, 710, 712, 713, 719, 720, 721, 722, 723, 725, 734, 740, 742, 845, 885, 919, 1038, 1043, 1065, 1066, 1068, 1070, 1071, 1072, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1087, 1088, 1089, 1090, 1091, 1093, 1094, 1095, 1096, 1099, 1109, 1116, 1122, 1148, 1169, 1170, 1175, 1181, 1185], "automat": [0, 2, 4, 50, 1109, 1112, 1118, 1126, 1138, 1161, 1162, 1196], "place": [0, 142, 155, 163, 165, 1102, 1109, 1139, 1145], "named_prefix_map": 0, "prefixcc": 0, "expans": [0, 1, 1170], "metamodel": [0, 202, 295, 373, 472, 672, 744, 813, 917, 1029, 1098, 1170], "metamodel_map": 0, "overrid": [0, 1058, 1061, 1070, 1086, 1097, 1110, 1113, 1170], "properti": [0, 1, 21, 25, 46, 112, 127, 157, 165, 223, 236, 272, 281, 323, 335, 376, 383, 385, 389, 391, 396, 397, 399, 400, 406, 407, 408, 411, 414, 420, 440, 479, 482, 483, 484, 487, 488, 491, 505, 506, 507, 508, 509, 510, 511, 515, 524, 529, 533, 535, 536, 539, 541, 543, 544, 545, 548, 616, 696, 697, 698, 702, 720, 765, 783, 831, 839, 845, 885, 940, 956, 989, 1004, 1038, 1055, 1063, 1070, 1105, 1109, 1110, 1114, 1120, 1121, 1122, 1148, 1170, 1177, 1178, 1179, 1180, 1183, 1185, 1197], "import": [0, 250, 392, 536, 616, 745, 815, 845, 885, 901, 1102, 1108, 1109, 1110, 1111, 1113, 1117, 1118, 1119, 1120, 1121, 1126, 1127, 1129, 1133, 1134, 1138, 1140, 1143, 1144, 1146, 1148, 1151, 1157, 1159, 1161, 1162, 1163, 1166, 1167, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1180, 1184, 1186, 1196, 1197], "depth": [0, 1186], "import_depth": [0, 1186], "maximum": [0, 1, 131, 696, 720, 725, 992, 1004, 1007, 1064, 1119, 1121, 1170, 1186, 1196], "travers": [0, 688, 695, 720, 1105, 1109, 1114, 1132, 1140, 1176, 1186], "current": [0, 14, 15, 25, 105, 106, 112, 147, 148, 157, 217, 218, 223, 262, 263, 272, 307, 308, 323, 384, 394, 395, 411, 425, 518, 519, 541, 690, 691, 702, 757, 758, 765, 833, 834, 839, 934, 935, 940, 983, 984, 989, 1041, 1042, 1055, 1105, 1108, 1109, 1111, 1116, 1120, 1121, 1127, 1131, 1132, 1138, 1139, 1146, 1152, 1154, 1161, 1162, 1163, 1165, 1166, 1169, 1170, 1172, 1173, 1177, 1182, 1185, 1186, 1197], "onli": [0, 1, 214, 229, 385, 391, 397, 427, 434, 942, 944, 956, 959, 964, 966, 992, 1004, 1105, 1109, 1112, 1119, 1121, 1122, 1127, 1132, 1139, 1143, 1146, 1148, 1152, 1161, 1163, 1169, 1170, 1175, 1176, 1182, 1183, 1185], "pronto": [0, 1, 1105, 1108, 1109, 1136, 1143, 1144, 1155, 1157, 1164, 1168, 1170], "locat": [0, 1133, 1138], "associations_typ": 0, "prefer": [0, 1, 2, 697, 1132, 1175], "preferred_languag": [0, 1119], "element": [0, 31, 46, 214, 230, 236, 242, 264, 271, 279, 281, 286, 288, 289, 290, 291, 292, 309, 321, 322, 333, 335, 351, 355, 358, 360, 362, 363, 366, 368, 440, 451, 479, 483, 491, 505, 512, 515, 524, 533, 538, 543, 544, 548, 615, 616, 1064, 1103, 1109, 1110, 1111, 1112, 1121, 1135, 1140, 1144, 1169, 1170, 1176, 1180, 1185], "other": [0, 1, 31, 46, 204, 219, 225, 232, 376, 389, 391, 397, 399, 408, 414, 420, 421, 422, 431, 433, 434, 435, 439, 440, 444, 445, 446, 449, 456, 457, 459, 466, 469, 471, 478, 698, 720, 731, 1103, 1105, 1109, 1110, 1111, 1112, 1114, 1115, 1116, 1117, 1118, 1120, 1121, 1126, 1129, 1131, 1133, 1146, 1162, 1168, 1170, 1172, 1176, 1180, 1185, 1196], "other_languag": 0, "addit": [0, 3, 17, 21, 22, 45, 46, 80, 214, 229, 236, 440, 451, 510, 1038, 1061, 1063, 1070, 1071, 1083, 1109, 1111, 1114, 1117, 1120, 1121, 1122, 1126, 1129, 1131, 1132, 1139, 1145, 1148, 1151, 1169, 1173, 1178, 1184, 1186, 1196], "request": [0, 1180], "requests_cache_db": 0, "all": [0, 1, 21, 155, 159, 165, 184, 185, 190, 193, 264, 265, 275, 280, 281, 287, 289, 309, 310, 313, 314, 328, 334, 335, 352, 354, 360, 388, 391, 392, 434, 438, 440, 446, 448, 449, 461, 484, 485, 616, 644, 843, 849, 866, 884, 885, 900, 923, 993, 996, 999, 1004, 1102, 1103, 1104, 1106, 1108, 1109, 1112, 1113, 1117, 1118, 1119, 1120, 1121, 1122, 1126, 1132, 1134, 1135, 1136, 1138, 1139, 1143, 1144, 1145, 1161, 1163, 1169, 1170, 1171, 1175, 1176, 1177, 1178, 1179, 1181, 1182, 1183, 1184, 1185, 1186, 1196], "http": [0, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 236, 237, 238, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1098, 1099, 1100, 1101, 1102, 1103, 1105, 1109, 1111, 1112, 1113, 1116, 1117, 1119, 1121, 1122, 1126, 1127, 1132, 1137, 1138, 1141, 1148, 1153, 1159, 1160, 1162, 1167, 1170, 1172, 1175, 1180, 1182, 1184, 1186, 1187, 1196], "file": [0, 2, 392, 1102, 1106, 1109, 1112, 1117, 1118, 1119, 1121, 1123, 1127, 1130, 1131, 1133, 1134, 1136, 1143, 1145, 1146, 1148, 1155, 1157, 1164, 1168, 1169, 1170, 1173, 1174, 1184, 1186], "w": [0, 1138, 1154], "wrap_adapt": 0, "anoth": [0, 3, 17, 30, 37, 43, 46, 53, 61, 66, 67, 68, 76, 77, 79, 80, 84, 86, 87, 88, 89, 92, 155, 165, 204, 339, 421, 440, 944, 952, 956, 1103, 1109, 1111, 1119, 1120, 1126, 1132, 1169, 1170, 1172, 1175, 1181, 1196], "llm": [0, 1107, 1123, 1130, 1155, 1168, 1184], "semsimian": [0, 1114], "input_typ": 0, "format": [0, 2, 397, 427, 479, 483, 488, 491, 511, 512, 515, 524, 533, 536, 538, 543, 544, 548, 563, 1106, 1109, 1110, 1111, 1113, 1114, 1116, 1117, 1118, 1120, 1122, 1132, 1133, 1134, 1139, 1140, 1146, 1147, 1148, 1162, 1164, 1169, 1170, 1186, 1196], "permiss": [0, 1161], "vari": [0, 1109, 1110, 1139], "depend": [0, 4, 49, 51, 385, 440, 992, 1011, 1109, 1117, 1129, 1132, 1136, 1138, 1139, 1152, 1170], "context": [0, 1109, 1110, 1114, 1129, 1196], "add": [0, 479, 483, 491, 510, 512, 515, 524, 530, 533, 538, 543, 544, 548, 1062, 1119, 1120, 1126, 1127, 1129, 1133, 1151, 1169, 1170, 1175, 1186], "merg": [0, 1, 385, 479, 483, 491, 502, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 616, 845, 885, 893, 1114, 1119, 1132, 1137, 1138, 1170], "profil": [0, 479, 483, 488, 491, 506, 508, 509, 510, 511, 512, 515, 524, 533, 538, 543, 544, 548, 553, 561, 566, 578, 579, 581, 587, 592, 599, 628, 668, 845, 875, 885, 1113, 1119, 1121, 1182], "0001988": 0, "explicit": [0, 4, 49, 51, 1111, 1132, 1138, 1175, 1186], "fetch": [0, 1105, 1109, 1131, 1170, 1175], "envo": [0, 1121, 1169], "core": [0, 3, 17, 22, 31, 38, 46, 53, 202, 295, 373, 391, 434, 440, 451, 472, 568, 616, 672, 744, 813, 917, 1029, 1098, 1109, 1111, 1113, 1114, 1134, 1143, 1170, 1175], "behavior": [0, 21, 30, 45, 46, 78, 79, 1110, 1122, 1132, 1134, 1135, 1138, 1139, 1148, 1170, 1180, 1197], "simpl": [0, 1, 204, 214, 236, 238, 239, 387, 389, 391, 434, 440, 446, 450, 451, 453, 465, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 783, 786, 794, 795, 796, 797, 798, 799, 800, 802, 805, 806, 807, 808, 809, 810, 1102, 1103, 1107, 1109, 1112, 1114, 1116, 1117, 1120, 1135, 1143, 1155, 1162, 1168, 1170, 1171, 1184, 1195], "datamodel": [0, 1, 120, 164, 165, 203, 250, 275, 281, 282, 283, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 332, 333, 334, 336, 337, 338, 339, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 783, 913, 970, 996, 1027, 1038, 1063, 1096, 1101, 1102, 1109, 1120, 1127, 1130, 1131, 1132, 1134, 1135, 1139, 1143, 1146, 1148, 1151, 1157, 1159, 1169, 1170, 1172, 1175, 1176, 1177, 1183, 1184, 1185, 1186], "tupl": [0, 1102, 1110, 1117, 1120, 1157, 1162, 1164, 1166, 1169, 1170, 1172, 1176, 1177, 1179, 1180, 1181, 1182, 1184, 1197], "being": [0, 1, 31, 46, 204, 384, 425, 426, 440, 446, 473, 474, 479, 483, 491, 509, 512, 513, 514, 515, 524, 530, 533, 536, 538, 543, 544, 548, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 628, 638, 649, 650, 658, 661, 667, 668, 669, 671, 698, 735, 768, 783, 796, 806, 831, 843, 845, 866, 885, 1109, 1110, 1116, 1131, 1132, 1195], "some": [0, 1, 31, 46, 384, 385, 387, 389, 425, 436, 440, 458, 513, 514, 530, 543, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 585, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 623, 626, 628, 638, 649, 650, 655, 658, 660, 661, 667, 668, 669, 671, 942, 956, 971, 1103, 1105, 1109, 1110, 1111, 1112, 1115, 1116, 1117, 1118, 1119, 1120, 1122, 1126, 1132, 1133, 1138, 1139, 1143, 1152, 1162, 1166, 1167, 1169, 1170, 1174, 1176, 1178, 1180, 1184, 1195, 1196], "standard": [0, 1, 2, 275, 328, 375, 397, 414, 421, 423, 440, 468, 996, 1103, 1105, 1107, 1109, 1110, 1111, 1113, 1114, 1117, 1119, 1120, 1121, 1122, 1132, 1134, 1135, 1159, 1162, 1196], "vocabulari": [0, 214, 229, 376, 383, 397, 408, 409, 414, 420, 421, 440, 478, 845, 885, 890, 892, 1038, 1063, 1096, 1102, 1110, 1112, 1117, 1119, 1120, 1122, 1127, 1134, 1159, 1169, 1170, 1176, 1196], "sko": [0, 1, 219, 234, 318, 356, 479, 483, 488, 491, 506, 507, 508, 510, 511, 512, 515, 524, 533, 538, 543, 544, 548, 553, 558, 561, 562, 578, 591, 592, 596, 628, 638, 697, 845, 891, 1109, 1110, 1112, 1113, 1117, 1119, 1132, 1196], "altlabel": [0, 479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 553, 697, 1110], "oboinowl": [0, 414, 440, 468, 483, 488, 533, 538, 543, 548, 590, 597, 623, 624, 625, 626, 627, 640, 660, 674, 1110, 1113, 1117, 1118, 1170, 1196], "etc": [0, 1, 2, 225, 235, 391, 449, 1109, 1121, 1132, 1174, 1186], "know": [0, 1102, 1106, 1110, 1132, 1134, 1166, 1196], "model": [0, 1, 18, 19, 31, 41, 95, 108, 109, 127, 131, 152, 153, 165, 203, 204, 221, 222, 238, 269, 270, 281, 316, 317, 335, 401, 402, 408, 440, 451, 508, 510, 528, 534, 578, 616, 628, 693, 694, 720, 745, 761, 763, 783, 815, 836, 837, 885, 937, 938, 945, 956, 986, 987, 992, 1004, 1027, 1047, 1048, 1050, 1070, 1106, 1107, 1109, 1112, 1114, 1117, 1118, 1120, 1123, 1130, 1143, 1145, 1146, 1155, 1169, 1170, 1184], "give": [0, 1, 155, 165, 1110, 1120, 1126, 1132, 1143, 1177], "back": [0, 1, 397, 427, 1132, 1143, 1144, 1157, 1164], "richer": 0, "data": [0, 1, 31, 41, 203, 204, 238, 407, 440, 451, 745, 815, 827, 885, 913, 1050, 1063, 1070, 1071, 1072, 1076, 1079, 1080, 1087, 1088, 1089, 1096, 1101, 1105, 1106, 1107, 1108, 1109, 1112, 1113, 1114, 1116, 1117, 1122, 1130, 1132, 1135, 1138, 1143, 1145, 1146, 1159, 1161, 1163, 1169, 1183, 1184], "present": [0, 4, 42, 46, 82, 83, 155, 165, 166, 169, 175, 178, 204, 384, 389, 391, 396, 434, 440, 449, 463, 473, 474, 1105, 1120, 1122, 1140, 1148, 1170, 1176, 1177, 1184, 1196], "includ": [0, 1, 2, 21, 45, 46, 391, 434, 440, 449, 451, 505, 506, 507, 508, 509, 510, 511, 513, 514, 530, 544, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 628, 638, 649, 650, 658, 661, 667, 668, 669, 671, 697, 720, 738, 845, 879, 885, 889, 901, 992, 1000, 1003, 1004, 1049, 1070, 1100, 1103, 1104, 1109, 1111, 1112, 1113, 1116, 1117, 1118, 1120, 1121, 1122, 1126, 1129, 1132, 1134, 1139, 1140, 1144, 1148, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1179, 1180, 1182, 1183, 1184, 1185, 1196], "proven": [0, 214, 236, 249, 408, 440, 1111], "In": [0, 1, 2, 214, 229, 945, 956, 1102, 1109, 1110, 1111, 1112, 1113, 1114, 1116, 1118, 1119, 1120, 1121, 1122, 1129, 1132, 1134, 1135, 1138, 1143, 1148, 1161, 1162, 1170, 1177, 1186, 1196], "futur": [0, 1105, 1108, 1109, 1116, 1121, 1126, 1132, 1133, 1138, 1139, 1143, 1162, 1169, 1176, 1177, 1182, 1186], "mai": [0, 1, 2, 4, 6, 21, 45, 49, 51, 97, 137, 204, 206, 214, 229, 254, 299, 339, 378, 385, 421, 493, 681, 748, 821, 828, 830, 831, 904, 926, 942, 943, 944, 955, 956, 957, 962, 969, 974, 1032, 1105, 1108, 1109, 1110, 1111, 1112, 1116, 1117, 1118, 1119, 1120, 1121, 1126, 1129, 1132, 1138, 1139, 1143, 1144, 1152, 1161, 1162, 1170, 1171, 1172, 1174, 1176, 1177, 1178, 1180, 1182, 1183, 1184, 1185, 1186, 1195, 1196], "becom": [0, 4, 42, 46, 49, 51, 318, 356, 1118, 1121, 1148], "true": [0, 3, 4, 5, 17, 20, 21, 22, 24, 32, 33, 36, 37, 38, 41, 42, 45, 46, 49, 50, 51, 53, 62, 64, 66, 67, 71, 78, 80, 82, 83, 84, 85, 87, 88, 90, 92, 93, 94, 95, 96, 121, 127, 130, 133, 136, 155, 159, 165, 166, 167, 168, 169, 172, 175, 177, 178, 181, 184, 185, 186, 190, 191, 193, 198, 199, 205, 214, 215, 219, 225, 229, 230, 232, 235, 236, 237, 239, 240, 241, 242, 249, 251, 253, 264, 265, 266, 267, 271, 280, 281, 284, 285, 286, 287, 289, 292, 293, 296, 298, 309, 310, 311, 312, 313, 314, 319, 321, 322, 334, 335, 341, 345, 346, 347, 348, 350, 351, 352, 354, 357, 360, 364, 365, 368, 370, 371, 375, 376, 377, 383, 384, 385, 388, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 431, 432, 433, 434, 435, 437, 438, 439, 440, 445, 448, 449, 455, 456, 457, 460, 463, 466, 467, 469, 470, 478, 479, 482, 483, 484, 485, 488, 489, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 524, 525, 529, 530, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 553, 557, 558, 561, 562, 563, 565, 566, 567, 568, 571, 572, 573, 574, 575, 578, 579, 580, 583, 585, 586, 587, 588, 589, 591, 592, 593, 595, 596, 597, 599, 601, 603, 604, 605, 607, 609, 610, 611, 613, 615, 616, 617, 631, 632, 633, 638, 639, 640, 644, 647, 650, 652, 653, 655, 656, 657, 658, 659, 660, 662, 663, 664, 665, 667, 669, 671, 677, 678, 680, 695, 696, 698, 699, 707, 708, 710, 714, 720, 727, 728, 729, 734, 737, 740, 746, 747, 764, 767, 768, 769, 782, 783, 784, 788, 795, 800, 803, 804, 805, 806, 810, 816, 817, 818, 819, 820, 827, 828, 830, 831, 838, 843, 845, 849, 857, 859, 860, 865, 866, 867, 869, 877, 879, 885, 887, 890, 891, 892, 894, 900, 903, 904, 907, 909, 915, 924, 939, 942, 943, 944, 945, 950, 951, 952, 955, 956, 958, 959, 961, 962, 963, 964, 965, 966, 967, 969, 971, 972, 973, 981, 991, 992, 993, 994, 999, 1000, 1002, 1003, 1004, 1012, 1013, 1020, 1028, 1030, 1031, 1038, 1044, 1046, 1051, 1052, 1053, 1058, 1061, 1062, 1063, 1069, 1070, 1085, 1089, 1096, 1097, 1109, 1110, 1118, 1120, 1122, 1134, 1145, 1148, 1149, 1161, 1162, 1169, 1170, 1171, 1175, 1176, 1178, 1180, 1181, 1183, 1184, 1185, 1196], "provenancem": 0, "o": [0, 21, 45, 46, 387, 406, 440, 1108, 1113, 1116, 1120, 1121, 1122, 1126, 1127, 1132, 1133, 1136, 1139, 1146, 1148, 1152, 1162, 1163, 1170, 1175], "output": [0, 2, 21, 46, 78, 326, 335, 1103, 1113, 1117, 1122, 1126, 1127, 1132, 1136, 1139, 1145, 1146], "output_typ": 0, "desir": [0, 1109, 1138, 1139, 1175], "": [0, 1, 21, 24, 44, 45, 46, 387, 440, 546, 845, 885, 1064, 1106, 1109, 1111, 1118, 1119, 1120, 1126, 1129, 1133, 1143, 1144, 1170], "given": [0, 1064, 1110, 1111, 1122, 1145, 1148, 1170, 1177, 1181, 1182, 1183, 1184, 1186, 1196], "here": [0, 1, 397, 427, 820, 885, 898, 942, 959, 1104, 1109, 1112, 1116, 1118, 1119, 1120, 1121, 1122, 1126, 1127, 1129, 1132, 1133, 1139, 1141, 1143, 1148, 1163, 1169, 1170, 1175, 1176, 1184], "mean": [0, 1, 111, 142, 150, 216, 275, 328, 391, 400, 404, 407, 408, 409, 410, 440, 445, 498, 679, 688, 697, 701, 768, 783, 802, 925, 996, 1054, 1064, 1108, 1109, 1110, 1112, 1120, 1132, 1134, 1140, 1170], "transit": [0, 513, 514, 530, 548, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 583, 585, 586, 587, 589, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 619, 620, 623, 624, 626, 627, 628, 638, 649, 650, 652, 655, 658, 660, 661, 666, 667, 668, 669, 671, 1105, 1172, 1176, 1177, 1182], "closur": [0, 3, 4, 17, 22, 42, 46, 49, 51, 66, 67, 87, 88, 392, 1105, 1109, 1169], "parent": [0, 155, 165, 167, 168, 170, 171, 175, 181, 187, 188, 189, 193, 387, 450, 1116, 1132, 1133, 1170, 1179, 1183], "just": [0, 1, 2, 1103, 1106, 1118, 1120, 1132], "owl": [0, 1, 203, 204, 375, 384, 385, 387, 388, 389, 391, 396, 397, 400, 406, 407, 408, 424, 430, 436, 440, 446, 454, 457, 458, 461, 463, 473, 477, 479, 483, 488, 491, 492, 506, 512, 515, 524, 533, 536, 538, 539, 540, 543, 544, 545, 548, 552, 554, 555, 556, 559, 563, 564, 569, 572, 581, 583, 584, 588, 589, 598, 607, 611, 614, 616, 618, 619, 630, 634, 635, 636, 637, 646, 647, 648, 652, 654, 657, 662, 663, 670, 671, 673, 675, 676, 827, 830, 838, 841, 845, 865, 875, 885, 902, 920, 921, 945, 1106, 1109, 1111, 1112, 1113, 1115, 1117, 1118, 1120, 1122, 1129, 1130, 1131, 1132, 1134, 1135, 1138, 1140, 1146, 1148, 1162, 1163, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1179, 1180, 1182, 1185, 1186], "4023094": 0, "ancestri": [0, 1105, 1176], "graph": [0, 1, 203, 375, 376, 383, 384, 385, 387, 388, 389, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 422, 433, 434, 435, 439, 440, 444, 445, 446, 449, 451, 456, 457, 466, 469, 1106, 1109, 1114, 1121, 1122, 1130, 1131, 1135, 1138, 1140, 1143, 1155, 1159, 1160, 1165, 1166, 1167, 1168, 1169, 1170, 1174, 1176, 1182, 1185, 1186], "like": [0, 1, 408, 701, 830, 942, 956, 1102, 1103, 1105, 1109, 1110, 1111, 1112, 1116, 1117, 1118, 1119, 1120, 1121, 1126, 1127, 1129, 1132, 1134, 1135, 1139, 1143, 1144, 1152, 1163, 1169, 1174, 1185, 1196], "relat": [0, 1, 3, 17, 22, 46, 66, 67, 87, 88, 155, 159, 163, 164, 165, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 182, 183, 184, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 409, 410, 479, 483, 491, 502, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 616, 644, 745, 845, 885, 899, 942, 959, 1104, 1105, 1109, 1110, 1111, 1114, 1121, 1138, 1140, 1143, 1146, 1166, 1167, 1168, 1174, 1176, 1182], "constrain": [0, 385, 422, 432, 440, 446, 454, 460, 498, 616, 944, 956, 1120, 1132, 1169, 1170, 1175, 1177], "backend": [0, 1102, 1112, 1113, 1130, 1131, 1133, 1140, 1170, 1195], "goblet": 0, "cell": [0, 1107, 1109, 1120, 1121, 1126, 1133, 1138, 1140, 1154, 1170], "go": [0, 1, 31, 46, 391, 392, 405, 440, 456, 479, 483, 488, 491, 506, 508, 510, 512, 515, 524, 533, 538, 543, 544, 548, 566, 578, 581, 599, 628, 668, 830, 831, 904, 942, 956, 1038, 1063, 1096, 1102, 1109, 1110, 1118, 1120, 1121, 1122, 1126, 1129, 1132, 1133, 1135, 1139, 1140, 1146, 1152, 1156, 1157, 1161, 1162, 1166, 1169, 1170, 1171, 1172, 1175, 1176, 1182, 1184, 1186, 1196], "0005773": [0, 1120, 1162, 1170, 1171, 1176], "0005737": [0, 1120, 1162, 1170], "python": [0, 204, 1102, 1106, 1109, 1112, 1113, 1114, 1118, 1121, 1127, 1129, 1130, 1131, 1132, 1135, 1139, 1144, 1163, 1186, 1188, 1195, 1196], "api": [0, 1105, 1106, 1109, 1121, 1126, 1127, 1132, 1139, 1140, 1143, 1151, 1153, 1154, 1155, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1187], "incatool": [0, 498, 1103, 1109, 1127, 1167, 1196], "github": [0, 2, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 483, 491, 498, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 1103, 1105, 1109, 1112, 1127, 1137, 1141, 1142, 1153, 1160, 1163, 1167, 1187, 1196], "io": [0, 391, 399, 403, 413, 415, 416, 421, 439, 1109, 1112, 1126, 1196], "access": [0, 1, 498, 1102, 1103, 1106, 1109, 1111, 1113, 1114, 1117, 1126, 1129, 1132, 1134, 1135, 1138, 1140, 1158, 1159, 1161, 1162, 1163, 1166, 1186, 1187, 1196], "kit": [0, 498, 1103, 1105, 1112, 1126, 1196], "obograph": [0, 1, 204, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 1110, 1130, 1131, 1136, 1146, 1147, 1148, 1149, 1157, 1159, 1168, 1170, 1174], "separ": [0, 1, 2, 1103, 1110, 1111, 1118, 1121, 1122, 1139, 1140, 1144, 1169], "shorthand": [0, 483, 533, 543, 548, 616, 1109, 1111, 1186], "m": [0, 1117, 1126, 1132, 1154, 1170], "method": [0, 1, 1102, 1105, 1106, 1109, 1110, 1116, 1118, 1120, 1121, 1122, 1133, 1134, 1135, 1139, 1144, 1159, 1162, 1169, 1170, 1172, 1174, 1175, 1176, 1182, 1184, 1185, 1186, 1196], "graph_traversal_method": 0, "whether": [0, 1109, 1110, 1118, 1119, 1122, 1140, 1144, 1148, 1165, 1170, 1171, 1172, 1173, 1174, 1175, 1179, 1180, 1182, 1185], "formal": [0, 1, 384, 440, 942, 958, 959, 1103, 1109, 1111, 1112, 1113, 1120, 1126, 1170, 1182], "entail": [0, 142, 155, 165, 845, 879, 885, 1103, 1109, 1114, 1116, 1134, 1170, 1177, 1182, 1183], "walk": [0, 1109, 1120, 1133, 1136, 1176], "hop": [0, 1109, 1120], "each": [0, 1, 142, 155, 163, 165, 204, 275, 325, 328, 335, 369, 440, 451, 830, 996, 1103, 1105, 1109, 1110, 1112, 1120, 1121, 1122, 1126, 1129, 1132, 1135, 1143, 1144, 1148, 1167, 1170, 1172, 1173, 1175, 1179, 1180, 1182, 1184, 1185, 1196], "piec": [0, 1, 1109, 1111, 1112, 1184], "text": [0, 111, 142, 150, 204, 216, 275, 328, 383, 400, 407, 409, 414, 479, 483, 491, 498, 508, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 578, 586, 670, 679, 688, 697, 701, 845, 863, 864, 885, 925, 981, 991, 992, 994, 996, 1001, 1005, 1006, 1008, 1009, 1010, 1012, 1013, 1014, 1015, 1016, 1018, 1021, 1022, 1023, 1024, 1025, 1054, 1064, 1102, 1106, 1109, 1112, 1114, 1116, 1121, 1126, 1129, 1130, 1132, 1140, 1152, 1154, 1168, 1169, 1170, 1174, 1180], "entiti": [0, 1, 3, 4, 17, 22, 23, 24, 31, 41, 44, 46, 61, 68, 86, 95, 127, 134, 135, 144, 159, 165, 176, 194, 214, 229, 230, 231, 233, 236, 238, 239, 241, 242, 243, 244, 249, 375, 376, 383, 384, 385, 387, 388, 391, 392, 396, 397, 399, 406, 408, 413, 414, 415, 420, 421, 423, 427, 429, 430, 439, 440, 441, 443, 444, 446, 453, 459, 467, 468, 470, 471, 475, 476, 477, 478, 498, 520, 525, 616, 697, 720, 738, 746, 768, 774, 783, 792, 796, 798, 799, 806, 808, 809, 845, 885, 892, 919, 992, 1000, 1003, 1004, 1027, 1109, 1110, 1111, 1112, 1114, 1119, 1120, 1130, 1132, 1135, 1144, 1151, 1154, 1157, 1166, 1169, 1170, 1171, 1174, 1175, 1176, 1177, 1178, 1181, 1182, 1183, 1185], "recognit": [0, 1004, 1027, 1184], "bioport": [0, 1, 1106, 1109, 1131, 1139, 1140, 1155, 1168, 1170, 1175, 1184], "have": [0, 1, 2, 214, 229, 408, 440, 451, 479, 483, 488, 491, 498, 506, 510, 511, 512, 513, 514, 515, 524, 530, 533, 536, 538, 543, 544, 548, 553, 563, 587, 601, 603, 604, 609, 616, 819, 884, 885, 939, 943, 944, 956, 972, 1064, 1102, 1103, 1104, 1105, 1106, 1108, 1109, 1111, 1112, 1116, 1117, 1118, 1119, 1120, 1121, 1126, 1127, 1129, 1132, 1134, 1135, 1138, 1139, 1143, 1144, 1152, 1170, 1196], "built": [0, 1109, 1134], "support": [0, 3, 4, 17, 22, 43, 46, 84, 92, 383, 391, 397, 421, 427, 449, 1102, 1106, 1109, 1110, 1114, 1116, 1120, 1121, 1129, 1132, 1134, 1143, 1152, 1154, 1163, 1166, 1169, 1170, 1180, 1185], "case": [0, 1, 28, 115, 142, 161, 227, 275, 276, 328, 329, 389, 418, 550, 696, 705, 713, 720, 771, 846, 947, 996, 997, 1059, 1102, 1105, 1109, 1111, 1112, 1113, 1114, 1117, 1120, 1121, 1122, 1136, 1143, 1148, 1162, 1163, 1170, 1175, 1184, 1186], "function": [0, 1105, 1109, 1112, 1116, 1117, 1118, 1126, 1129, 1132, 1133, 1137, 1139, 1144, 1145, 1168, 1184, 1187, 1188, 1189, 1190, 1191, 1192, 1193, 1195], "enlarg": 0, "nucleu": [0, 1102, 1122, 1129, 1139, 1146, 1157, 1162, 1166, 1170, 1171, 1172, 1175, 1176, 1184, 1186], "peripher": 0, "blood": 0, "basic": [0, 155, 165, 1102, 1105, 1107, 1109, 1114, 1116, 1117, 1118, 1119, 1120, 1121, 1126, 1127, 1130, 1131, 1135, 1143, 1155, 1159, 1168, 1174, 1185], "algorithm": [0, 266, 281, 285, 311, 335, 350], "base": [0, 1, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 18, 19, 25, 26, 27, 28, 29, 42, 46, 49, 50, 51, 93, 95, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 112, 113, 114, 115, 116, 127, 131, 136, 137, 138, 139, 140, 141, 143, 144, 145, 146, 147, 148, 149, 151, 152, 153, 154, 156, 157, 158, 160, 161, 162, 205, 206, 207, 208, 209, 210, 211, 212, 213, 217, 218, 220, 221, 222, 223, 224, 226, 227, 228, 236, 238, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 268, 269, 270, 272, 273, 274, 275, 276, 277, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 315, 316, 317, 320, 323, 324, 326, 327, 328, 329, 330, 335, 349, 377, 378, 379, 380, 381, 382, 386, 390, 393, 394, 395, 398, 401, 402, 403, 411, 412, 416, 417, 418, 419, 421, 452, 489, 490, 493, 494, 495, 496, 497, 499, 501, 516, 517, 518, 519, 520, 526, 527, 528, 534, 541, 542, 546, 547, 549, 550, 551, 678, 681, 682, 683, 684, 685, 686, 687, 689, 690, 691, 692, 693, 694, 700, 702, 703, 704, 705, 706, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 765, 766, 770, 771, 772, 773, 783, 803, 817, 821, 822, 823, 824, 825, 826, 829, 832, 833, 834, 835, 836, 837, 839, 840, 843, 844, 846, 847, 849, 866, 884, 885, 900, 923, 924, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 940, 941, 946, 947, 948, 973, 974, 975, 976, 977, 978, 979, 980, 982, 983, 984, 985, 986, 987, 988, 989, 990, 995, 996, 997, 998, 1030, 1032, 1033, 1034, 1035, 1036, 1037, 1039, 1040, 1041, 1042, 1045, 1047, 1048, 1053, 1055, 1056, 1057, 1059, 1060, 1070, 1105, 1107, 1108, 1109, 1112, 1114, 1116, 1127, 1132, 1143, 1145, 1165, 1170, 1180, 1184, 1186, 1197], "builtin": [0, 1109, 1120], "slow": [0, 1108, 1121, 1126, 1144, 1169], "index": [0, 204, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 321, 334, 335, 352, 830, 1109, 1126, 1130, 1143, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "re": [0, 1138], "everi": [0, 155, 165, 1113, 1116, 1120, 1121, 1132, 1172], "time": [0, 4, 9, 46, 100, 127, 140, 165, 209, 236, 257, 281, 302, 335, 381, 440, 496, 616, 684, 720, 751, 783, 824, 842, 878, 885, 910, 929, 956, 977, 1004, 1035, 1070, 1107, 1115, 1116, 1120, 1132, 1134, 1138, 1139, 1175], "To": [0, 1105, 1108, 1110, 1117, 1118, 1120, 1121, 1130, 1132, 1135, 1139, 1148, 1157, 1159, 1162, 1164, 1166, 1167, 1169, 1170, 1175], "preserv": 0, "On": [0, 1105, 1111, 1113, 1118, 1120, 1138, 1196], "subsequ": [0, 1184], "iter": [0, 696, 1106, 1109, 1135, 1167, 1169, 1170, 1171, 1172, 1175, 1176, 1177, 1179, 1180, 1181, 1182, 1184, 1185, 1195], "reus": [0, 1127], "pars": [0, 21, 30, 45, 46, 78, 79, 421, 1106, 1109, 1162, 1170, 1186], "gilda": [0, 1155, 1168], "instal": [0, 1106, 1123, 1129, 1131, 1138], "extra": [0, 214, 229, 1126, 1132, 1186], "whole": [0, 1127, 1132, 1170, 1181], "perform": [0, 992, 1004, 1050, 1070, 1071, 1074, 1084, 1092, 1105, 1109, 1118, 1120, 1121, 1127, 1132, 1133, 1143, 1154, 1162, 1167, 1174, 1182, 1184], "ground": [0, 992, 1004, 1107, 1110, 1126, 1184], "brca2": 0, "flag": [0, 1111, 1116, 1121, 1122, 1148], "plugin": [0, 1105, 1109, 1123, 1130, 1131, 1184], "oakx": [0, 2, 1129, 1137], "spaci": [0, 1129, 1184], "bero": 0, "myeloid": 0, "deriv": [0, 1138], "suppressor": 0, "yield": [0, 266, 275, 281, 285, 294, 311, 328, 335, 350, 372, 996, 1102, 1109, 1114, 1144, 1169, 1170, 1172, 1175, 1176, 1177, 1179, 1181, 1182, 1184, 1185], "confid": [0, 318, 335, 374, 991, 1004, 1043, 1070, 1132], "0": [0, 2, 3, 4, 17, 20, 21, 22, 23, 24, 95, 96, 131, 150, 155, 159, 214, 215, 219, 225, 264, 265, 266, 267, 271, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 479, 482, 483, 488, 491, 492, 505, 506, 507, 508, 509, 510, 511, 512, 515, 524, 525, 533, 536, 538, 539, 540, 543, 544, 545, 548, 680, 695, 696, 698, 699, 746, 767, 768, 769, 816, 818, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 939, 942, 943, 944, 945, 981, 991, 992, 993, 994, 1038, 1043, 1049, 1050, 1051, 1052, 1058, 1061, 1062, 1063, 1126, 1132, 1137, 1169, 1170, 1171, 1176], "8": [0, 1109, 1120, 1130, 1131, 1170], "object_alias": [0, 991, 1004], "mdsc": 0, "object_id": [0, 698, 720, 768, 783, 991, 1004, 1043, 1070, 1102, 1117, 1132, 1175, 1184], "mesh_d000072737": 0, "object_label": [0, 3, 17, 22, 41, 46, 698, 720, 768, 783, 991, 1004, 1113, 1132, 1138, 1184], "subject_end": [0, 981, 991, 1004, 1022, 1132, 1184], "30": [0, 1170], "subject_start": [0, 981, 991, 1004, 1022, 1132, 1184], "w3id": [0, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 236, 237, 238, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 472, 672, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1098, 1099, 1100, 1101, 1102, 1117, 1127, 1172, 1175, 1180, 1184], "org": [0, 1, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 236, 237, 238, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 391, 392, 405, 440, 456, 472, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1098, 1099, 1100, 1101, 1102, 1105, 1109, 1111, 1112, 1113, 1116, 1117, 1119, 1122, 1127, 1132, 1136, 1148, 1159, 1170, 1172, 1175, 1180, 1182, 1184, 1186, 1196], "word": [0, 275, 328, 996], "span": [0, 696, 720, 723, 1109, 1169], "entir": [0, 830, 831, 849, 866, 884, 885, 900, 904, 923, 992, 1004, 1122, 1127, 1170, 1173, 1176, 1185], "text_fil": [0, 1184], "newlin": 0, "entri": [0, 1118, 1122, 1129, 1148], "distinct": [0, 1, 416, 510, 845, 876, 885, 892, 912, 1109, 1110, 1166, 1169, 1176, 1186], "lexical_index_fil": 0, "recreat": [0, 2], "unless": [0, 28, 115, 161, 227, 276, 329, 418, 550, 705, 771, 846, 947, 997, 1059, 1122, 1132, 1148, 1171, 1186], "column": [0, 1103, 1109, 1116, 1163], "match_column": [0, 1184], "tsv": [0, 1108, 1117, 1127, 1132, 1152, 1163, 1175], "csv": [0, 1116, 1117, 1121, 1132], "train": 0, "en_ner_craft_md": 0, "x": [0, 2, 1118], "exclud": [0, 992, 1004, 1028, 1118, 1170], "token": [0, 992, 1004, 1028], "exclude_token": 0, "prior": [0, 2, 46, 73, 74, 75], "r": [0, 389, 406, 440, 1166, 1170, 1171, 1174, 1176, 1179], "rule": [0, 204, 275, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 406, 424, 479, 483, 491, 506, 512, 515, 524, 529, 533, 538, 543, 544, 548, 566, 599, 606, 668, 944, 949, 1038, 1063, 1064, 1070, 1096, 1105, 1108, 1130, 1184], "rules_fil": 0, "conform": [0, 10, 11, 12, 14, 15, 25, 46, 101, 102, 103, 105, 106, 112, 127, 141, 143, 145, 147, 148, 157, 165, 210, 211, 212, 217, 218, 223, 236, 258, 259, 260, 262, 263, 272, 281, 303, 304, 305, 307, 308, 323, 335, 382, 386, 390, 394, 395, 411, 440, 497, 498, 499, 501, 518, 519, 541, 616, 685, 686, 687, 690, 691, 702, 720, 752, 753, 754, 757, 758, 765, 783, 825, 826, 829, 833, 834, 839, 885, 930, 931, 932, 934, 935, 940, 956, 978, 979, 980, 983, 984, 989, 1004, 1036, 1037, 1039, 1041, 1042, 1055, 1064, 1070, 1102, 1107, 1108, 1109, 1110, 1113, 1117, 1121, 1132, 1134, 1139, 1182, 1184], "c": [0, 387, 391, 434, 440, 1116, 1120, 1122, 1129, 1132, 1170, 1179], "configur": [0, 94, 127, 130, 696, 699, 710, 712, 713, 719, 720, 721, 722, 723, 725, 734, 738, 740, 742, 992, 1000, 1003, 1004, 1007, 1010, 1011, 1020, 1028, 1049, 1061, 1067, 1070, 1073, 1083, 1086, 1097, 1100, 1122, 1126, 1172, 1176, 1177, 1178, 1184, 1185, 1197], "configuration_fil": 0, "config": [0, 1123, 1151, 1180], "patch": [0, 1109, 1178], "kgcl": [0, 204, 1050, 1102, 1109, 1118, 1130, 1131, 1155, 1172, 1178], "com": [0, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 480, 481, 483, 491, 498, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 1103, 1109, 1126, 1127, 1137, 1138, 1141, 1153, 1160, 1162, 1167, 1187], "ttl": [0, 1113, 1170, 1186], "renam": [0, 696, 1163], "0000561": 0, "amacrin": 0, "neuron": [0, 1102, 1133, 1138, 1180, 1184], "simpleobo": [0, 1120, 1164, 1170, 1172], "edit": [0, 1109, 1126, 1139, 1170], "0005634": [0, 1170, 1175, 1176, 1184], "foo": [0, 1118, 1169], "new": [0, 4, 36, 42, 46, 50, 54, 55, 56, 82, 83, 325, 335, 359, 1104, 1109, 1120, 1123, 1126, 1131, 1139, 1163, 1166, 1170], "With": [0, 1120, 1121, 1122, 1130, 1131, 1139, 1148], "uri": [0, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 330, 331, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 744, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 813, 814, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1098, 1099, 1100, 1101, 1109, 1110, 1114, 1122, 1127, 1130, 1145, 1148, 1170, 1176], "purl": [0, 391, 392, 405, 440, 456, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 1111, 1113, 1116, 1122, 1132, 1170, 1186, 1196], "obolibrari": [0, 391, 392, 405, 440, 456, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 1111, 1113, 1116, 1122, 1132, 1136, 1138, 1170, 1186, 1196], "cl_0000561": 0, "still": [0, 1038, 1070, 1109, 1110, 1119, 1170, 1182, 1196], "experiment": [0, 1105, 1116, 1120, 1139, 1153, 1163, 1182, 1197], "thing": [0, 1, 3, 4, 17, 22, 30, 37, 41, 43, 46, 53, 61, 66, 67, 68, 76, 77, 79, 80, 84, 86, 87, 88, 89, 92, 165, 166, 214, 219, 229, 231, 233, 235, 236, 237, 243, 247, 248, 479, 483, 488, 491, 505, 506, 507, 511, 512, 515, 524, 525, 533, 536, 538, 543, 544, 548, 558, 562, 565, 584, 591, 594, 600, 608, 612, 616, 630, 633, 635, 638, 657, 658, 661, 671, 1103, 1109, 1111, 1112, 1113, 1120, 1143, 1163, 1170, 1172, 1173, 1175, 1179, 1180, 1182, 1185, 1186, 1196], "bear": 0, "mind": 0, "work": [0, 1, 2, 696, 720, 1105, 1107, 1108, 1109, 1112, 1116, 1119, 1120, 1123, 1130, 1131, 1133, 1134, 1135, 1138, 1143, 1157, 1163, 1190, 1196], "instead": [0, 414, 441, 1109, 1118, 1120, 1122, 1132, 1139, 1143, 1148, 1167, 1170, 1186], "surround": 0, "changes_output": 0, "changes_input": 0, "changes_format": 0, "json": [0, 2, 14, 15, 46, 105, 106, 127, 147, 148, 165, 217, 218, 236, 262, 263, 281, 307, 308, 335, 394, 395, 440, 518, 519, 616, 690, 691, 720, 757, 758, 783, 833, 834, 885, 934, 935, 956, 983, 984, 1004, 1041, 1042, 1070, 1109, 1122, 1126, 1139, 1146, 1148, 1157, 1162, 1186], "dry": 0, "kcgl": 0, "do": [0, 1, 204, 389, 768, 774, 1106, 1109, 1111, 1116, 1120, 1122, 1126, 1127, 1129, 1132, 1138, 1139, 1143, 1145, 1148, 1163, 1166, 1170, 1172, 1173, 1175, 1176, 1179, 1180, 1182, 1185, 1186], "complex": [0, 440, 451, 1120, 1140, 1166, 1178], "atom": [0, 266, 267, 281, 284, 285, 293, 294, 311, 312, 335, 345, 350, 370, 372, 680, 696, 720, 768, 774, 775, 776, 777, 780, 781, 783, 786, 796, 797, 798, 799, 802, 806, 807, 808, 809, 1178], "ignor": [0, 1170, 1178, 1186], "invalid": [0, 1178], "contributor": [0, 479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 616, 653, 819, 820, 867, 868, 884, 885, 898, 909, 1178], "person": [0, 31, 46, 225, 247, 1109, 1113], "contribut": [0, 383, 831, 843, 845, 849, 885, 1106, 1130], "overwrit": 0, "sourc": [0, 2, 46, 165, 171, 174, 180, 281, 335, 616, 720, 783, 956, 1004, 1070, 1102, 1103, 1105, 1114, 1127, 1132, 1136, 1145, 1147, 1148, 1149, 1151, 1153, 1154, 1156, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1186, 1197], "my": [0, 214, 1106, 1126, 1129, 1133, 1148, 1152, 1161, 1162, 1163], "0002200": 0, "modifi": [0, 30, 32, 33, 34, 36, 37, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 163, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 422, 423, 424, 425, 426, 427, 428, 429, 430, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 513, 514, 530, 552, 553, 554, 555, 556, 557, 558, 559, 560, 562, 563, 564, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 576, 578, 579, 580, 581, 582, 583, 585, 586, 587, 588, 589, 590, 591, 592, 594, 595, 596, 597, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 630, 638, 639, 640, 641, 647, 648, 649, 650, 651, 652, 655, 658, 660, 661, 662, 663, 664, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 707, 708, 709, 710, 711, 712, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 774, 775, 776, 777, 778, 779, 780, 781, 782, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 802, 803, 804, 805, 806, 807, 808, 809, 810, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 866, 867, 868, 869, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 882, 883, 884, 886, 888, 889, 890, 891, 892, 893, 895, 896, 897, 898, 899, 900, 901, 902, 904, 905, 906, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1050, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1111, 1145, 1163, 1169, 1172, 1185], "id": [0, 95, 121, 127, 142, 214, 219, 225, 232, 234, 235, 236, 241, 391, 399, 413, 415, 440, 483, 491, 502, 506, 515, 524, 525, 533, 536, 538, 543, 544, 548, 568, 599, 616, 642, 767, 783, 816, 819, 831, 838, 843, 845, 885, 942, 945, 956, 991, 994, 1004, 1014, 1031, 1038, 1044, 1046, 1063, 1070, 1096, 1110, 1113, 1116, 1118, 1119, 1120, 1121, 1122, 1132, 1133, 1138, 1148, 1161, 1167, 1170, 1175, 1196], "1": [0, 1, 3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 131, 142, 150, 155, 159, 214, 219, 225, 264, 266, 267, 271, 309, 311, 312, 313, 314, 318, 321, 322, 325, 326, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 479, 482, 483, 488, 491, 492, 498, 505, 506, 508, 509, 511, 512, 515, 524, 525, 533, 536, 538, 540, 543, 544, 548, 680, 695, 696, 698, 699, 746, 767, 768, 769, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 939, 942, 943, 944, 945, 981, 991, 992, 994, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1058, 1061, 1063, 1105, 1109, 1116, 1118, 1119, 1121, 1123, 1130, 1131, 1154, 1162, 1171, 1180], "2": [0, 2, 142, 391, 399, 403, 413, 415, 416, 421, 439, 1116, 1118, 1119, 1120, 1123, 1130, 1131, 1132, 1154, 1170, 1175, 1180], "3": [0, 142, 1116, 1119, 1123, 1126, 1130, 1131, 1132, 1137, 1169, 1170, 1171], "chain": [0, 391, 406, 424, 440, 446, 454, 457, 1120, 1131, 1177], "them": [0, 392, 440, 1106, 1109, 1116, 1127, 1132, 1170, 1182, 1185], "redund": [0, 479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 944, 952, 956, 965, 1171, 1182], "more": [0, 1, 4, 14, 25, 42, 46, 49, 51, 95, 105, 112, 117, 123, 127, 142, 147, 157, 203, 204, 214, 217, 223, 229, 236, 262, 272, 307, 323, 384, 394, 411, 440, 451, 479, 483, 488, 491, 511, 512, 515, 518, 524, 533, 536, 538, 541, 543, 544, 548, 563, 690, 702, 745, 757, 765, 815, 833, 839, 934, 940, 944, 969, 983, 989, 1041, 1055, 1061, 1070, 1073, 1102, 1109, 1110, 1111, 1112, 1113, 1114, 1116, 1118, 1119, 1121, 1123, 1126, 1130, 1132, 1135, 1138, 1143, 1144, 1155, 1161, 1167, 1169, 1170, 1171, 1172, 1175, 1176, 1184, 1185, 1186, 1197], "test": [0, 322, 325, 335, 336, 349, 358, 1102, 1104, 1105, 1113, 1119, 1120, 1122, 1123, 1135, 1138, 1144, 1146, 1148, 1157, 1159, 1162, 1166, 1170, 1171, 1172, 1175, 1176, 1184, 1186], "candid": [0, 944, 956, 1195], "form": [0, 14, 15, 105, 106, 147, 148, 155, 190, 217, 218, 262, 263, 275, 307, 308, 328, 391, 394, 395, 406, 424, 434, 435, 440, 479, 498, 508, 512, 515, 518, 519, 524, 544, 578, 690, 691, 757, 758, 833, 834, 934, 935, 983, 984, 996, 1041, 1042, 1103, 1109, 1110, 1111, 1113, 1119, 1121, 1126, 1132, 1139, 1170, 1172], "tripl": [0, 3, 17, 22, 38, 46, 53, 479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 845, 885, 908, 1109, 1117, 1120, 1134, 1166, 1167, 1170, 1196], "period": [0, 1122, 1148], "0005743": 0, "ncbitaxon": [0, 491, 512, 608, 943, 1134, 1143, 1169, 1170], "2759": [0, 1170], "never": [0, 942, 944, 956, 958, 964, 966, 1118, 1143], "evolut": 0, "arxiv": 0, "ab": 0, "1802": 0, "06004": 0, "0000229": 0, "gain": 0, "loss": 0, "eukaryota": [0, 1170], "eval": 0, "evo": 0, "blob": [0, 1141], "main": [0, 1, 400, 440, 1103, 1104, 1105, 1109, 1111, 1120, 1129, 1132, 1151, 1163, 1165, 1170, 1185], "notebook": [0, 1103, 1105, 1127, 1130], "ipynb": 0, "evolution_fil": 0, "contain": [0, 24, 46, 85, 397, 440, 698, 720, 731, 944, 968, 1109, 1110, 1112, 1119, 1120, 1122, 1132, 1134, 1148, 1163, 1176], "lookup": [0, 1105, 1109, 1121, 1132, 1133, 1135, 1140, 1143, 1155, 1168, 1170, 1175, 1186], "hp": [0, 1105, 1110, 1111, 1112, 1118, 1121, 1122, 1126, 1148, 1151, 1156, 1170, 1186], "hpoa": [0, 31, 46, 1111, 1121, 1169], "plu": [0, 214, 229, 230, 231, 233, 236, 239, 241, 242, 243, 244, 249, 942, 956, 971, 1109, 1132, 1136, 1170, 1186, 1190], "0001392": 0, "abnorm": [0, 1109, 1111, 1126, 1148, 1156, 1170], "liver": [0, 1126, 1156], "awkward": 0, "both": [0, 142, 440, 451, 720, 738, 1004, 1027, 1102, 1103, 1106, 1108, 1109, 1110, 1114, 1116, 1117, 1120, 1121, 1172, 1179, 1180, 1196], "bundl": [0, 484, 616, 1137, 1143], "combin": [0, 1, 9, 46, 100, 127, 140, 165, 209, 236, 257, 281, 302, 335, 381, 385, 440, 496, 616, 684, 720, 751, 783, 824, 885, 929, 942, 956, 971, 977, 1004, 1035, 1070, 1105, 1109, 1111, 1121, 1169, 1170, 1176, 1181, 1186, 1196], "togeth": [0, 392, 438, 440, 446, 451, 456, 1119, 1121, 1151, 1169, 1170], "dictybas": 0, "spec": [0, 1146, 1163, 1169, 1171], "src": [0, 1127, 1129, 1133, 1169, 1171], "conf": [0, 1169, 1171], "yaml": [0, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 328, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 400, 405, 406, 407, 408, 409, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 498, 500, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 521, 522, 523, 524, 525, 529, 530, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 679, 680, 688, 695, 696, 697, 698, 699, 701, 707, 708, 709, 710, 711, 712, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 764, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 882, 883, 884, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 925, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 996, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1054, 1058, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1116, 1117, 1126, 1127, 1132, 1139, 1169, 1171, 1186], "0008104": 0, "autolabel": [0, 1161, 1171], "assign": [0, 1109, 1132, 1170], "absent": [0, 1151], "if_abs": 0, "when": [0, 1, 2, 14, 15, 21, 25, 30, 45, 46, 78, 79, 105, 106, 112, 147, 148, 157, 215, 217, 218, 223, 262, 263, 272, 307, 308, 323, 385, 387, 394, 395, 411, 440, 479, 483, 491, 509, 512, 515, 518, 519, 524, 533, 536, 538, 541, 543, 544, 548, 569, 575, 616, 690, 691, 696, 702, 720, 740, 757, 758, 765, 768, 774, 833, 834, 839, 934, 935, 940, 983, 984, 989, 1041, 1042, 1055, 1102, 1109, 1110, 1112, 1116, 1118, 1119, 1120, 1121, 1129, 1132, 1148, 1157, 1162, 1164, 1169, 1170, 1196], "empti": [0, 1169, 1170, 1175], "set_valu": 0, "field": [0, 1, 4, 46, 91, 111, 127, 219, 225, 232, 698, 701, 720, 726, 730, 741, 1102, 1111, 1132, 1169, 1171, 1175], "association_pred": 0, "role": [0, 383, 414, 420, 819, 884, 885, 1170], "terms_rol": 0, "how": [0, 155, 165, 696, 698, 701, 710, 712, 713, 719, 720, 721, 722, 723, 725, 734, 738, 740, 741, 742, 1106, 1109, 1112, 1114, 1116, 1130, 1131, 1132, 1133, 1134, 1139, 1144, 1176, 1186, 1196], "interpret": [0, 397, 440, 696, 701, 720, 742, 1109, 1162], "object": [0, 3, 4, 14, 15, 17, 19, 20, 22, 23, 24, 25, 27, 30, 31, 33, 34, 36, 37, 38, 41, 42, 43, 44, 46, 47, 48, 49, 50, 51, 53, 54, 55, 56, 57, 58, 59, 60, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 76, 77, 79, 80, 81, 82, 83, 84, 86, 87, 88, 89, 90, 91, 92, 105, 106, 109, 112, 114, 127, 142, 147, 148, 150, 153, 155, 157, 160, 165, 166, 167, 168, 169, 170, 171, 175, 182, 184, 187, 188, 189, 190, 193, 217, 218, 222, 223, 226, 236, 262, 263, 270, 272, 274, 281, 307, 308, 313, 317, 323, 327, 335, 348, 376, 383, 387, 389, 394, 395, 402, 407, 408, 411, 414, 417, 420, 436, 440, 450, 451, 475, 479, 482, 483, 488, 491, 506, 512, 513, 514, 515, 518, 519, 524, 525, 530, 533, 534, 538, 539, 541, 543, 544, 547, 548, 553, 556, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 583, 585, 586, 587, 589, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 619, 620, 623, 624, 626, 627, 628, 638, 649, 650, 651, 652, 655, 658, 660, 661, 666, 667, 668, 669, 671, 690, 691, 694, 698, 702, 704, 720, 732, 746, 757, 758, 763, 765, 768, 770, 775, 783, 788, 797, 833, 834, 837, 839, 841, 844, 845, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 866, 869, 871, 872, 873, 875, 876, 877, 879, 880, 884, 885, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 900, 901, 902, 906, 908, 911, 912, 914, 915, 918, 919, 923, 934, 935, 938, 940, 944, 946, 956, 969, 983, 984, 987, 989, 995, 1004, 1038, 1041, 1042, 1046, 1048, 1052, 1055, 1057, 1062, 1063, 1064, 1070, 1085, 1102, 1109, 1111, 1113, 1120, 1127, 1129, 1133, 1135, 1138, 1139, 1143, 1145, 1148, 1157, 1161, 1169, 1170, 1171, 1172, 1175, 1176, 1177, 1178, 1179, 1181], "subject": [0, 3, 4, 17, 20, 22, 23, 30, 31, 33, 37, 38, 41, 43, 46, 53, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 74, 75, 76, 77, 79, 80, 81, 84, 87, 88, 89, 90, 92, 142, 150, 155, 165, 166, 167, 175, 177, 178, 179, 180, 183, 184, 190, 193, 195, 196, 197, 200, 201, 214, 230, 313, 335, 348, 387, 440, 465, 479, 483, 488, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 555, 566, 606, 668, 746, 768, 783, 788, 807, 845, 885, 892, 942, 944, 953, 955, 956, 957, 958, 959, 961, 962, 963, 971, 981, 991, 1004, 1022, 1038, 1046, 1063, 1070, 1072, 1080, 1109, 1111, 1113, 1120, 1121, 1127, 1138, 1143, 1161, 1169, 1170, 1171, 1175, 1176, 1177, 1179, 1181], "group": [0, 4, 24, 38, 44, 46, 85, 91, 251, 264, 265, 281, 289, 292, 296, 309, 310, 335, 360, 368, 375, 385, 408, 422, 432, 440, 443, 446, 453, 454, 460, 475, 476, 478, 479, 483, 484, 488, 491, 509, 512, 513, 514, 515, 524, 530, 533, 538, 543, 544, 548, 553, 558, 560, 562, 563, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 585, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 623, 626, 628, 638, 644, 649, 650, 655, 658, 660, 661, 667, 668, 669, 671, 764, 783, 818, 828, 831, 845, 859, 860, 877, 879, 885, 890, 891, 892, 904, 915, 943, 955, 956, 957, 1109, 1111, 1112, 1116, 1129, 1132, 1172, 1176, 1183], "summarz": 0, "hpo": [0, 1111, 1118, 1121, 1122, 1169, 1170], "number": [0, 10, 11, 12, 46, 95, 101, 102, 103, 127, 134, 135, 141, 143, 145, 165, 210, 211, 212, 236, 258, 259, 260, 281, 303, 304, 305, 335, 382, 386, 390, 440, 497, 499, 501, 616, 685, 686, 687, 696, 698, 720, 725, 735, 752, 753, 754, 768, 783, 786, 818, 825, 826, 828, 829, 845, 850, 851, 852, 858, 859, 860, 863, 864, 871, 872, 873, 876, 877, 879, 880, 885, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 901, 902, 906, 908, 911, 912, 914, 915, 918, 919, 930, 931, 932, 956, 978, 979, 980, 992, 1004, 1007, 1036, 1037, 1039, 1061, 1070, 1073, 1103, 1105, 1109, 1111, 1112, 1116, 1120, 1121, 1126, 1132, 1134, 1135, 1139, 1143, 1146, 1169, 1172, 1196], "direct": [0, 127, 142, 1109, 1114, 1126, 1132, 1138, 1171, 1176, 1179], "diseas": [0, 31, 46, 1109, 1111, 1171], "special": [0, 4, 36, 142, 440, 451, 701, 1109, 1116, 1118, 1132, 1140, 1143, 1159, 1167, 1170, 1185, 1196], "particular": [0, 1, 2, 27, 46, 114, 127, 160, 165, 214, 226, 229, 236, 274, 281, 327, 335, 417, 440, 547, 616, 696, 704, 710, 712, 713, 719, 720, 721, 722, 723, 725, 734, 740, 742, 770, 783, 818, 831, 844, 882, 883, 885, 904, 946, 956, 995, 1004, 1057, 1061, 1063, 1070, 1097, 1102, 1105, 1109, 1110, 1113, 1116, 1121, 1122, 1132, 1133, 1140, 1143, 1167, 1170, 1175, 1186], "databas": [0, 376, 397, 408, 414, 420, 421, 478, 1102, 1105, 1108, 1109, 1120, 1121, 1127, 1132, 1138, 1140, 1143, 1144, 1155, 1168, 1174, 1186], "iea": 0, "amigo": [0, 1169], "limit": [0, 397, 427, 440, 451, 696, 720, 992, 1004, 1105, 1109, 1111, 1116, 1132, 1135, 1163, 1167, 1169, 1170], "f": [0, 387, 440, 1110, 1113, 1120, 1129, 1133, 1140, 1144, 1162, 1169, 1170, 1171, 1176], "evidence_typ": [0, 3, 17, 22, 46], "speci": [0, 46, 127, 165, 236, 281, 335, 440, 616, 720, 783, 885, 943, 944, 955, 956, 957, 969, 1004, 1070, 1110, 1161], "9606": [0, 512, 1161], "accept": [0, 1, 1103, 1138, 1143, 1197], "detail": [0, 1, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 328, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 400, 405, 406, 407, 408, 409, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 498, 500, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 521, 522, 523, 524, 525, 529, 530, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 679, 680, 688, 695, 696, 697, 698, 699, 701, 707, 708, 709, 710, 711, 712, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 764, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 882, 883, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 925, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 996, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1054, 1058, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1102, 1109, 1111, 1112, 1113, 1115, 1121, 1126, 1132, 1138, 1166, 1169, 1174, 1176, 1185], "10": [0, 142, 1105, 1169], "k": 0, "min": 0, "facet": [0, 818, 827, 828, 845, 859, 860, 877, 879, 883, 885, 890, 891, 892, 915], "min_facet_count": 0, "minimum": [0, 131, 508, 578, 616, 628, 1064, 1132, 1181], "group_bi": [0, 1169, 1183], "co": [0, 20, 33, 46, 57, 58, 59, 60, 62, 63, 64, 65, 81, 90, 1169], "wood": 0, "carbon": 0, "et": [0, 1110, 1121], "al": [0, 1110, 1121], "royalsocietypublish": 0, "doi": [0, 1105, 1111], "1098": 0, "rsob": 0, "200149": 0, "0042416": 0, "0014046": 0, "As": [0, 1139, 1176, 1180], "heatmap": 0, "tmp": 0, "png": [0, 318, 374, 1136], "gene": [0, 31, 46, 120, 127, 214, 225, 236, 238, 247, 1109, 1110, 1111, 1116, 1118, 1121, 1126, 1161, 1169, 1171], "otherwis": [0, 1133, 1148], "ofn": 0, "write": [0, 1105, 1108, 1112, 1123, 1126, 1130, 1133, 1134, 1138, 1139, 1144, 1173, 1174, 1185], "funowl": [0, 204, 1105, 1109, 1130, 1137, 1143, 1160, 1162, 1164, 1166, 1177], "axiom_typ": 0, "about": [0, 1, 3, 4, 17, 22, 37, 41, 46, 80, 86, 89, 375, 376, 383, 384, 385, 387, 388, 391, 392, 396, 397, 399, 406, 408, 414, 420, 427, 440, 441, 443, 446, 453, 468, 475, 476, 478, 944, 956, 969, 1038, 1063, 1070, 1071, 1080, 1089, 1102, 1109, 1110, 1111, 1118, 1120, 1131, 1133, 1134, 1136, 1143, 1155, 1170, 1174, 1175, 1177], "refer": [0, 1, 28, 115, 144, 161, 165, 227, 276, 329, 376, 397, 408, 414, 418, 420, 421, 440, 443, 446, 453, 475, 476, 478, 550, 705, 771, 846, 947, 997, 1059, 1109, 1112, 1113, 1114, 1118, 1122, 1129, 1130, 1136, 1148, 1176, 1177, 1186], "pystow": [0, 1108, 1138], "dai": [0, 7, 27, 46, 98, 114, 127, 138, 160, 165, 207, 226, 236, 255, 274, 281, 300, 327, 335, 379, 417, 440, 494, 547, 616, 682, 704, 720, 749, 770, 783, 822, 844, 885, 927, 946, 956, 975, 995, 1004, 1033, 1057, 1070], "old": [0, 4, 36, 42, 46, 50, 69, 70, 71, 72, 82, 83, 1108], "days_old": 0, "anyth": [0, 2, 525, 529, 535, 611, 616, 671, 697, 1102, 1138, 1196, 1197], "than": [0, 2, 95, 117, 123, 127, 409, 479, 483, 488, 491, 511, 512, 515, 524, 533, 536, 538, 543, 544, 548, 563, 944, 949, 956, 1061, 1064, 1070, 1073, 1109, 1110, 1111, 1112, 1114, 1118, 1132, 1139, 1144, 1161, 1170, 1171], "100": 0, "todo": [0, 2, 479, 483, 488, 491, 492, 506, 509, 510, 511, 512, 515, 524, 533, 538, 539, 540, 543, 544, 548, 643, 768, 944, 1124, 1125, 1126, 1127, 1135, 1136, 1137, 1160, 1185, 1186], "unix": [0, 1112], "system": [0, 1, 1109, 1110, 1111, 1112, 1116, 1120, 1122, 1126, 1129, 1138, 1148, 1170], "textual": [0, 383, 414, 420, 440, 443, 446, 453, 475, 476, 478, 1004, 1027, 1112, 1116, 1121, 1126, 1184, 1196], "tropic": 0, "biom": 0, "temper": 0, "d": [0, 387, 391, 434, 440, 443, 446, 453, 475, 476, 478, 1102, 1116, 1132, 1138], "displai": [0, 1105, 1107, 1110, 1132, 1148], "obojson": [0, 1], "fhirjson": [0, 1122, 1148], "nl": [0, 1170], "statement": [0, 488, 554, 555, 556, 557, 563, 570, 574, 576, 590, 597, 600, 603, 610, 616, 621, 622, 625, 628, 640, 658, 663, 674, 845, 885, 914, 915, 944, 954, 956, 1109, 1155, 1166, 1170], "store": [0, 1105, 1109, 1113, 1132, 1134, 1135, 1152, 1169, 1170], "reific": 0, "assai": [0, 1138, 1140, 1163], "heart": [0, 1109, 1110, 1113, 1119], "invers": [0, 479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 1121], "But": [0, 385, 1105, 1109, 1116, 1120, 1121, 1129, 1143, 1196], "potenti": [0, 385, 422, 432, 440, 446, 454, 460, 510, 1109, 1118, 1120, 1144, 1170, 1196], "explos": 0, "especi": [0, 1120], "high": [0, 1109, 1132, 1139, 1143, 1162, 1172], "level": [0, 4, 49, 51, 408, 943, 955, 956, 957, 1109, 1110, 1117, 1129, 1135, 1139, 1143, 1166, 1170, 1172, 1196], "comput": [0, 831, 843, 845, 885, 900, 1109, 1114, 1116, 1120, 1129, 1130, 1132, 1135, 1181], "bar": 0, "produc": [0, 1107, 1144], "html": [0, 391, 399, 403, 413, 415, 416, 421, 439, 1109, 1122, 1126, 1148, 1196], "control": [0, 214, 230, 236, 275, 281, 328, 335, 996, 1004, 1112, 1132, 1170, 1172, 1173, 1175, 1179, 1180, 1182, 1185], "natur": [0, 1107, 1111, 1126], "txt": [0, 1161], "summari": [0, 4, 46, 91, 204, 827, 830, 831, 841, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 866, 869, 871, 872, 873, 875, 876, 877, 878, 879, 880, 884, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 900, 901, 902, 904, 906, 908, 910, 911, 912, 914, 915, 918, 919, 922, 923, 1126, 1130, 1168, 1172, 1174], "accord": [0, 1116, 1126, 1176], "oio": [0, 376, 397, 408, 409, 413, 414, 415, 420, 467, 478, 479, 483, 488, 491, 505, 506, 507, 509, 510, 512, 515, 524, 533, 536, 538, 543, 544, 548, 566, 570, 571, 574, 576, 590, 597, 599, 601, 603, 604, 605, 609, 610, 615, 623, 624, 625, 626, 627, 640, 642, 643, 660, 663, 665, 674, 1107, 1110, 1113, 1117, 1118, 1170], "hasobonamespac": [0, 479, 483, 491, 505, 512, 515, 524, 533, 538, 543, 544, 548, 605, 1118], "partit": [0, 1, 831, 845, 885, 1183], "dictionari": [0, 275, 328, 996, 1135, 1147, 1170, 1172, 1183], "outer": 0, "kei": [0, 3, 17, 22, 46, 80, 214, 219, 232, 236, 241, 264, 265, 267, 280, 281, 282, 284, 287, 292, 309, 310, 312, 334, 335, 337, 345, 352, 368, 405, 408, 440, 443, 446, 453, 455, 475, 476, 478, 818, 820, 827, 828, 830, 853, 854, 855, 856, 867, 1058, 1070, 1087, 1096, 1106, 1132, 1145, 1155, 1170, 1172, 1176, 1179, 1183, 1187], "inner": 0, "__residual__": 0, "tabular": [0, 1116], "out": [0, 1, 830, 831, 904, 1105, 1106, 1118, 1119, 1126, 1133, 1135, 1139, 1151, 1170, 1171], "doe": [0, 1, 397, 423, 440, 698, 720, 726, 1106, 1107, 1108, 1109, 1116, 1120, 1121, 1127, 1129, 1132, 1135, 1140, 1163], "complet": [0, 1, 28, 46, 115, 127, 161, 165, 227, 236, 276, 281, 329, 335, 418, 440, 550, 616, 705, 720, 771, 783, 846, 885, 947, 956, 997, 1004, 1059, 1070, 1105, 1120, 1168, 1170], "robot": [0, 2, 1105, 1116, 1129, 1131, 1138, 1155, 1162, 1168, 1170, 1177], "other_ontologi": [0, 1172], "quick": [0, 1105, 1114, 1132], "change_typ": 0, "classcreat": 0, "edgedelet": 0, "group_by_properti": 0, "isdefinedbi": [0, 479, 483, 491, 509, 512, 515, 522, 524, 533, 536, 538, 543, 544, 548, 616, 1170], "namespac": [0, 391, 392, 405, 440, 456, 1102, 1129], "defin": [0, 1, 214, 229, 384, 391, 396, 425, 426, 428, 433, 437, 440, 445, 446, 457, 463, 473, 474, 944, 960, 1111, 1112, 1116, 1120, 1121, 1140, 1169, 1170, 1176, 1184], "infer": [0, 4, 42, 46, 49, 51, 944, 949, 956, 970, 972, 1109, 1116, 1120, 1132, 1161, 1166, 1170, 1183, 1186], "explicitli": [0, 2, 696, 719, 1132, 1166, 1169, 1170], "sh": [0, 313, 354, 391, 392, 405, 447, 455, 456, 819, 838, 905, 1038, 1051, 1052, 1054, 1062, 1063, 1064, 1071, 1072, 1076, 1080, 1085, 1087, 1089, 1096], "gaf": [0, 31, 46, 1111, 1169], "date": [0, 4, 8, 9, 39, 42, 46, 52, 54, 69, 99, 100, 127, 139, 140, 165, 208, 209, 236, 256, 257, 281, 301, 302, 335, 380, 381, 440, 479, 483, 491, 495, 496, 509, 512, 515, 524, 533, 538, 543, 544, 548, 616, 653, 683, 684, 720, 750, 751, 783, 823, 824, 885, 928, 929, 956, 976, 977, 1004, 1034, 1035, 1070, 1106], "date1": 0, "date2": 0, "download_dir": 0, "public": [0, 3, 4, 17, 22, 42, 46, 82, 83, 383, 1111], "move": [0, 339, 1177], "old_dat": [0, 4, 40, 42, 46], "yyyi": 0, "mm": 0, "dd": 0, "new_dat": [0, 4, 40, 42, 46], "other_associ": 0, "One": [0, 150, 1110, 1120, 1132, 1163, 1171, 1186], "primary_knowledge_sourc": [0, 3, 4, 17, 21, 22, 46, 1186], "compar": [0, 768, 774, 783, 796, 806, 831, 843, 845, 866, 885, 1110, 1114, 1120, 1172], "calcul": [0, 842, 848, 878, 885, 910, 922, 1102, 1105, 1109, 1121, 1168, 1169, 1170, 1174, 1175, 1181], "cross": [0, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 204, 376, 397, 408, 414, 420, 421, 440, 478, 1114, 1116, 1130], "connect": [0, 1, 164, 165, 440, 451, 513, 514, 530, 533, 539, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 583, 585, 586, 587, 589, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 619, 620, 623, 624, 626, 627, 628, 638, 649, 650, 652, 655, 658, 660, 661, 666, 667, 668, 669, 671, 944, 956, 961, 1109, 1110, 1116, 1117, 1131, 1152, 1155, 1158, 1166, 1169, 1170, 1179, 1182], "comparison": [0, 275, 328, 996], "zfa": [0, 1117], "distribut": [0, 1117, 1127, 1169], "within": [0, 14, 15, 24, 25, 46, 85, 105, 106, 112, 147, 148, 155, 157, 165, 166, 169, 175, 178, 217, 218, 223, 262, 263, 272, 307, 308, 323, 394, 395, 411, 479, 488, 508, 512, 515, 518, 519, 524, 541, 544, 628, 690, 691, 702, 757, 758, 765, 833, 834, 839, 934, 935, 940, 944, 956, 964, 983, 984, 989, 1041, 1042, 1055, 1102, 1109, 1110, 1116, 1118, 1126, 1127, 1133, 1167, 1169, 1186, 1196], "provid": [0, 1, 203, 204, 397, 421, 440, 451, 520, 526, 616, 696, 720, 738, 740, 820, 885, 898, 1102, 1103, 1105, 1107, 1109, 1110, 1111, 1112, 1113, 1114, 1116, 1117, 1119, 1121, 1126, 1129, 1132, 1135, 1136, 1139, 1140, 1143, 1144, 1152, 1158, 1159, 1161, 1163, 1166, 1168, 1170, 1171, 1172, 1174, 1176, 1178, 1179, 1180, 1182, 1183, 1184, 1185, 1196], "extern": [0, 214, 229, 383, 420, 440, 443, 446, 453, 475, 476, 478, 845, 885, 890, 892, 1038, 1068, 1070, 1071, 1072, 1075, 1076, 1079, 1080, 1087, 1088, 1089, 1095, 1096, 1099, 1102, 1132, 1139], "ont1": [0, 1172], "ont2": [0, 1172], "sssom": [0, 3, 17, 22, 68, 77, 89, 150, 204, 319, 335, 341, 346, 347, 357, 364, 365, 371, 698, 728, 729, 730, 731, 732, 768, 796, 798, 799, 806, 808, 809, 981, 991, 1001, 1004, 1008, 1014, 1015, 1016, 1018, 1023, 1027, 1102, 1108, 1109, 1114, 1119, 1130, 1152, 1175, 1196], "exist": [0, 2, 375, 384, 389, 391, 399, 413, 415, 440, 444, 1110, 1116, 1118, 1120, 1121, 1123, 1129, 1135, 1139, 1156, 1170], "serial": [0, 6, 28, 97, 115, 137, 161, 206, 227, 254, 267, 276, 281, 284, 293, 299, 312, 329, 335, 345, 370, 378, 418, 493, 550, 681, 705, 748, 771, 821, 846, 926, 947, 974, 997, 1032, 1059, 1105, 1109, 1112, 1122, 1148, 1186], "mp": [0, 1121, 1151], "mapping_input": 0, "other_input": 0, "other_input_typ": 0, "intra": 0, "ident": [0, 142, 155, 190, 391, 399, 413, 415, 444, 1109, 1120], "report": [0, 95, 117, 123, 127, 204, 827, 830, 831, 841, 843, 845, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 866, 869, 871, 872, 873, 875, 876, 877, 879, 880, 884, 885, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 900, 901, 902, 906, 908, 911, 912, 913, 914, 915, 918, 919, 923, 1051, 1053, 1061, 1062, 1070, 1073, 1083, 1085, 1086, 1097, 1130], "ha": [0, 1, 4, 50, 71, 392, 408, 440, 510, 513, 514, 524, 530, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 628, 638, 649, 650, 658, 661, 667, 668, 669, 671, 1102, 1105, 1109, 1110, 1112, 1113, 1116, 1120, 1121, 1122, 1132, 1134, 1138, 1144, 1148, 1159, 1167, 1170, 1174, 1186], "bidirect": 0, "left": [0, 142, 155, 159, 165, 167, 168, 170, 171, 172, 173, 174, 175, 176, 177, 179, 180, 181, 184, 198, 199, 1116], "right": [0, 142, 155, 159, 165, 167, 181, 184, 187, 188, 189, 190, 193, 194, 195, 196, 197, 198, 199, 1110, 1116, 1132], "perspect": [0, 142, 155, 165, 204, 1118, 1175], "leav": [0, 21, 78, 1110, 1120, 1132, 1175, 1176], "off": [0, 1105, 1157], "pairwis": [0, 764, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 783, 786, 794, 795, 796, 797, 798, 799, 800, 802, 805, 806, 807, 808, 809, 810, 1109, 1121, 1181], "setwis": 0, "union": [0, 384, 440, 474, 696, 740, 768, 783, 786, 1103, 1197], "involv": [0, 1105, 1106, 1109, 1120, 1139, 1143, 1169, 1170, 1195], "express": [0, 155, 163, 165, 168, 169, 170, 172, 173, 177, 178, 179, 182, 183, 186, 187, 188, 190, 191, 195, 196, 200, 201, 203, 384, 389, 425, 426, 431, 436, 440, 446, 458, 473, 474, 485, 492, 539, 616, 701, 845, 851, 885, 1064, 1107, 1109, 1116, 1121, 1132, 1133, 1139, 1140, 1169, 1170, 1176, 1177, 1180, 1185], "easier": [0, 1108], "brows": 0, "desc": [0, 1103, 1116, 1121, 1126, 1156], "immun": [0, 1140], "export": [0, 1122, 1132, 1139, 1148, 1173], "pato": [0, 1120, 1138, 1186], "turtl": [0, 1109, 1112, 1118, 1134, 1186, 1196], "parameter": [0, 696, 720, 738, 740, 1109, 1196], "process": [0, 831, 843, 845, 885, 923, 992, 1004, 1028, 1105, 1109, 1118, 1126, 1140, 1167, 1176], "convert": [0, 385, 397, 427, 1105, 1108, 1119, 1122, 1130, 1144, 1145, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1168, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1186], "fhir": [0, 1112, 1123, 1130, 1146, 1149], "fhir_config": 0, "block": [0, 1126, 1144], "remot": [0, 1105, 1109, 1126, 1133, 1134, 1140, 1144, 1165, 1166, 1167, 1176, 1184, 1186, 1195], "avoid": [0, 2, 1102, 1132, 1138, 1143, 1167], "killer": 0, "config_fil": 0, "param": [0, 252, 266, 281, 297, 311, 335, 1148, 1170, 1176, 1178, 1186], "enforc": [0, 1105, 1108, 1145], "canon": [0, 1121, 1145, 1148], "order": [0, 214, 216, 236, 244, 275, 328, 996, 1102, 1103, 1145, 1169], "forc": [0, 696, 713, 720, 1138], "dif": 0, "analysi": [0, 1123, 1156], "sampl": [0, 95, 127, 134, 135, 1109, 1120, 1163, 1171], "identifi": [0, 236, 440, 616, 1103, 1109, 1111, 1112, 1114, 1118, 1119, 1130, 1169, 1170, 1176, 1180, 1196], "return": [0, 696, 720, 725, 992, 1004, 1007, 1110, 1113, 1116, 1117, 1118, 1119, 1120, 1132, 1135, 1143, 1144, 1145, 1147, 1148, 1149, 1152, 1163, 1166, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1186, 1197], "repres": [0, 1, 18, 19, 27, 31, 46, 108, 109, 114, 120, 127, 144, 152, 153, 160, 164, 165, 204, 214, 219, 221, 222, 226, 236, 237, 238, 239, 241, 250, 269, 270, 274, 281, 282, 283, 316, 317, 327, 335, 337, 338, 376, 383, 385, 387, 388, 391, 392, 397, 401, 402, 403, 406, 408, 409, 414, 416, 417, 420, 421, 422, 424, 433, 434, 435, 439, 440, 441, 443, 444, 445, 446, 449, 451, 453, 454, 456, 457, 461, 466, 468, 469, 475, 476, 478, 528, 534, 547, 616, 693, 694, 704, 720, 738, 745, 761, 763, 764, 770, 783, 815, 836, 837, 844, 885, 937, 938, 939, 943, 946, 955, 956, 957, 970, 986, 987, 995, 1004, 1027, 1047, 1048, 1057, 1070, 1109, 1111, 1112, 1114, 1116, 1117, 1136, 1146, 1166, 1169, 1170, 1196], "gene2anat": 0, "g2t": 0, "u": [0, 1109, 1120, 1161], "recommend": [0, 214, 396, 405, 437, 455, 463, 483, 491, 533, 538, 543, 548, 698, 729, 1038, 1063, 1096, 1105, 1108, 1116, 1126, 1127, 1129, 1132, 1169, 1171, 1178, 1185, 1196], "alwai": [0, 1, 396, 463, 1108, 1109, 1129, 1132, 1169], "background": [0, 95, 118, 119, 127, 1114, 1120, 1171], "consid": [0, 2, 391, 399, 413, 415, 444, 479, 483, 487, 491, 502, 506, 512, 515, 524, 533, 535, 538, 543, 544, 548, 616, 644, 1116, 1118, 1144, 1162, 1169, 1170, 1181, 1182, 1183, 1196], "experi": [0, 1112], "subsum": [0, 944, 956, 966, 1179], "lower": [0, 1120], "alreadi": [0, 1121, 1132, 1152], "pseudo": 0, "fake": 0, "simpli": [0, 1112, 1119, 1139, 1175], "reflex": [0, 155, 165, 1109, 1120, 1121, 1176], "itself": [0, 1, 408, 1109, 1112, 1120, 1163], "summar": [0, 1116, 1126], "meaning": [0, 1120, 1132], "treat": [0, 28, 115, 161, 227, 276, 329, 418, 550, 696, 705, 740, 771, 846, 947, 997, 1059, 1103, 1109, 1110, 1111, 1118, 1121, 1134, 1138, 1148, 1169, 1183, 1196], "cutoff": [0, 94, 127, 130, 1171], "greater": [0, 1064, 1171], "05": [0, 1169, 1171], "sample_fil": 0, "b": [0, 387, 389, 391, 434, 440, 720, 738, 1120, 1121, 1127, 1132, 1166], "background_fil": 0, "allow": [0, 1, 414, 440, 468, 696, 720, 723, 1061, 1064, 1070, 1083, 1086, 1097, 1103, 1109, 1110, 1117, 1119, 1126, 1129, 1132, 1135, 1136, 1139, 1151, 1159, 1180, 1186], "well": [0, 1, 2, 31, 46, 391, 408, 440, 449, 1103, 1109, 1111, 1112, 1113, 1132, 1135, 1143, 1170, 1177, 1180], "attribute_slim": 0, "value_slim": 0, "sub": [0, 24, 44, 387, 440, 830, 845, 885, 1120, 1152, 1154, 1166], "singl": [0, 1, 95, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 131, 132, 134, 135, 391, 392, 396, 397, 427, 437, 440, 498, 1111, 1119, 1139, 1166, 1170, 1175, 1183, 1185, 1196], "node": [0, 18, 28, 46, 108, 115, 127, 142, 152, 161, 165, 181, 199, 221, 227, 236, 269, 276, 281, 316, 325, 329, 335, 375, 376, 383, 384, 385, 387, 388, 391, 392, 396, 397, 400, 401, 406, 407, 408, 409, 413, 414, 415, 418, 420, 422, 433, 434, 435, 439, 440, 444, 445, 446, 448, 450, 451, 453, 456, 457, 459, 461, 465, 466, 469, 471, 528, 550, 616, 693, 705, 720, 761, 768, 771, 780, 783, 836, 846, 885, 937, 947, 956, 986, 997, 1004, 1038, 1044, 1047, 1059, 1063, 1069, 1070, 1072, 1076, 1080, 1089, 1109, 1110, 1118, 1120, 1121, 1135, 1148, 1169, 1170, 1174, 1176, 1196], "No": [0, 1105, 1106, 1120, 1132, 1170], "dangl": [0, 1, 1170, 1174, 1176], "edg": [0, 142, 155, 163, 165, 167, 168, 169, 170, 171, 172, 173, 174, 175, 177, 178, 179, 180, 181, 182, 183, 184, 186, 187, 188, 189, 190, 191, 193, 195, 196, 197, 199, 200, 201, 375, 376, 383, 384, 385, 388, 389, 391, 392, 396, 397, 399, 406, 408, 414, 415, 420, 422, 423, 427, 429, 430, 433, 435, 439, 440, 444, 445, 446, 449, 450, 451, 453, 456, 457, 465, 466, 467, 469, 470, 477, 478, 828, 845, 877, 879, 885, 1109, 1111, 1114, 1121, 1135, 1139, 1148, 1155, 1166, 1170, 1174, 1176, 1178, 1182, 1183], "even": [0, 1, 2, 1110, 1112, 1119, 1120, 1132, 1143, 1144, 1170, 1196], "wish": [0, 214, 215, 230, 1116, 1118, 1126, 1138, 1185], "fulli": [0, 1105, 1109, 1118, 1132, 1196, 1197], "anc": [0, 1103, 1120], "split": 0, "seed": [0, 1176, 1182], "Then": [0, 1120, 1126, 1129, 1132, 1133, 1136, 1138, 1162, 1182], "idfil": [0, 1121], "miss": [0, 142, 155, 165, 1116, 1120, 1127, 1152, 1170, 1185], "util": [0, 1109, 1130, 1144, 1146, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1168, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "table_fil": [0, 1168], "popul": [0, 1, 1116, 1122, 1148, 1170, 1175], "unpopul": 0, "row": [0, 1116], "revers": 0, "blank": [0, 1109, 1170], "scenario": [0, 1, 1170], "convent": [0, 3, 4, 17, 22, 23, 61, 86, 498, 1105, 1112, 1114, 1119, 1122, 1196], "header": 0, "later": [0, 2, 1120, 1121, 1132, 1169], "don": [0, 1, 2, 204, 1103, 1106, 1111, 1120, 1122, 1129, 1132, 1138, 1143, 1152, 1166, 1196], "By": [0, 1108, 1116, 1119, 1170, 1171], "throw": [0, 1176], "success": [0, 1050, 1070, 1132, 1178], "relax": [0, 421, 1170], "cannot": [0, 155, 165, 479, 483, 488, 491, 511, 512, 515, 524, 533, 536, 538, 543, 544, 548, 563, 1135, 1170], "remain": 0, "no_data": 0, "recogn": [0, 1110, 1129, 1184], "uniqu": [0, 1, 2, 155, 165, 166, 169, 175, 178, 219, 225, 232, 391, 399, 413, 415, 439, 440, 479, 488, 508, 512, 515, 524, 544, 628, 816, 819, 831, 838, 843, 845, 885, 1109, 1112, 1113, 1129, 1132, 1170], "procedur": 0, "denorm": [0, 41, 46, 1111], "foo_id": 0, "foo_nam": 0, "implicit": [0, 1111, 1186, 1197], "wai": [0, 1, 1102, 1105, 1107, 1109, 1110, 1111, 1112, 1113, 1116, 1117, 1118, 1119, 1121, 1122, 1126, 1127, 1129, 1132, 1136, 1138, 1144, 1166, 1167, 1169, 1171, 1180, 1185, 1186, 1196], "linkml": [0, 2, 8, 99, 139, 154, 171, 174, 180, 189, 192, 197, 202, 208, 256, 283, 295, 301, 337, 338, 339, 373, 380, 472, 495, 672, 683, 715, 716, 717, 718, 724, 744, 750, 813, 823, 853, 854, 855, 856, 861, 862, 881, 917, 928, 976, 1029, 1030, 1032, 1033, 1034, 1035, 1036, 1037, 1039, 1040, 1041, 1042, 1045, 1047, 1048, 1055, 1056, 1057, 1059, 1060, 1070, 1098, 1101, 1116, 1126, 1127, 1185], "first": [0, 2, 165, 175, 768, 783, 806, 808, 809, 1103, 1109, 1111, 1119, 1121, 1129, 1131, 1132, 1135, 1136, 1152, 1172, 1182], "cl_identifi": 0, "cl_display_label": 0, "sai": 0, "primary_kei": 0, "dependent_column": 0, "2nd": [0, 1120], "schema": [0, 1, 2, 204, 236, 238, 452, 537, 1070, 1109, 1112, 1113, 1123, 1126, 1130, 1134, 1138, 1162, 1166, 1170, 1184, 1185, 1186], "least": [0, 2, 1120, 1129], "slot": [0, 28, 115, 161, 204, 227, 276, 329, 418, 550, 705, 771, 846, 947, 997, 1059, 1064, 1127], "slot_uri": [0, 3, 4, 17, 21, 22, 23, 24, 30, 37, 44, 61, 68, 73, 74, 75, 76, 77, 79, 84, 86, 89, 95, 128, 167, 181, 184, 199, 214, 219, 225, 229, 230, 237, 239, 242, 244, 245, 246, 249, 313, 354, 376, 383, 387, 391, 392, 396, 397, 399, 405, 408, 413, 414, 415, 420, 427, 429, 430, 444, 447, 450, 453, 455, 456, 463, 465, 467, 475, 477, 479, 483, 488, 491, 492, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 521, 522, 523, 524, 525, 530, 533, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 609, 610, 612, 613, 614, 615, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 634, 635, 636, 637, 638, 639, 640, 642, 643, 646, 647, 648, 649, 650, 652, 654, 655, 657, 658, 660, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 698, 728, 729, 730, 731, 732, 767, 768, 787, 796, 798, 799, 806, 808, 809, 816, 838, 842, 848, 874, 878, 888, 905, 910, 916, 920, 921, 922, 939, 942, 943, 944, 945, 957, 958, 959, 960, 962, 968, 969, 981, 991, 1001, 1008, 1014, 1015, 1016, 1018, 1023, 1038, 1051, 1052, 1062, 1063, 1071, 1076, 1085, 1087, 1089, 1096], "attribut": [0, 3, 4, 17, 20, 21, 22, 23, 24, 45, 94, 95, 96, 155, 159, 214, 215, 219, 225, 229, 264, 265, 266, 267, 271, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 479, 482, 483, 488, 491, 492, 505, 506, 507, 508, 509, 510, 511, 512, 515, 524, 525, 533, 536, 538, 539, 540, 543, 544, 545, 548, 680, 695, 696, 698, 699, 746, 767, 768, 769, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 939, 942, 943, 944, 945, 981, 991, 992, 993, 994, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1058, 1061, 1062, 1063, 1064, 1102, 1109, 1170], "power": [0, 1126, 1135, 1143], "soon": [0, 1116, 1143], "now": [0, 1106, 1115, 1116, 1120, 1121, 1132, 1133, 1134, 1135, 1179, 1186], "pleas": [0, 1105, 1108, 1138, 1186], "issu": [0, 396, 437, 463, 479, 483, 491, 498, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 1038, 1043, 1054, 1063, 1065, 1070, 1071, 1087, 1103, 1108, 1110, 1123, 1144, 1154], "question": [0, 2, 1103, 1111, 1120, 1126], "fuzzi": 0, "detect": [0, 1129], "inconsist": 0, "optim": [0, 1169], "whichev": [0, 1129], "post": [0, 1103, 1169, 1171], "missing_value_token": 0, "comment": [0, 3, 17, 21, 22, 23, 46, 214, 318, 384, 391, 396, 397, 399, 405, 413, 415, 440, 479, 483, 488, 491, 506, 508, 511, 512, 515, 524, 533, 536, 538, 543, 544, 548, 616, 617, 696, 697, 746, 830, 831, 845, 942, 944, 956, 1118, 1170, 1174], "indic": [0, 408, 440, 488, 698, 720, 735, 1109, 1111, 1112, 1118, 1132, 1196, 1197], "begin": [0, 1180], "string": [0, 1, 3, 4, 6, 14, 15, 16, 17, 20, 22, 25, 37, 39, 40, 41, 46, 52, 54, 67, 68, 69, 77, 88, 89, 91, 95, 97, 105, 106, 107, 112, 122, 127, 137, 144, 147, 148, 149, 151, 155, 156, 157, 165, 175, 181, 184, 193, 198, 199, 206, 214, 217, 218, 219, 220, 223, 225, 231, 232, 233, 236, 242, 243, 254, 262, 263, 264, 266, 267, 268, 271, 272, 279, 281, 284, 285, 292, 294, 299, 307, 308, 309, 311, 312, 313, 315, 318, 319, 320, 321, 322, 323, 325, 326, 331, 333, 335, 336, 341, 342, 343, 345, 346, 347, 349, 350, 356, 357, 358, 359, 361, 362, 364, 365, 368, 371, 372, 376, 378, 383, 384, 385, 387, 388, 389, 391, 394, 395, 396, 397, 398, 399, 403, 405, 406, 408, 411, 413, 414, 415, 416, 420, 421, 424, 427, 432, 436, 440, 442, 443, 444, 448, 450, 453, 454, 455, 458, 460, 461, 462, 465, 467, 471, 475, 476, 477, 479, 482, 483, 488, 490, 491, 492, 493, 505, 506, 509, 510, 511, 512, 513, 514, 515, 518, 519, 520, 521, 522, 523, 524, 526, 527, 530, 533, 536, 538, 539, 540, 541, 543, 544, 546, 548, 549, 552, 553, 559, 560, 561, 563, 564, 568, 569, 570, 571, 573, 575, 576, 577, 579, 583, 585, 587, 590, 592, 593, 596, 597, 602, 605, 606, 614, 616, 617, 621, 622, 629, 631, 632, 633, 640, 641, 642, 643, 644, 649, 650, 651, 652, 653, 654, 655, 656, 659, 660, 662, 663, 667, 669, 673, 674, 676, 677, 680, 681, 690, 691, 692, 698, 700, 702, 712, 720, 726, 728, 729, 730, 731, 732, 733, 741, 746, 748, 757, 758, 759, 765, 767, 768, 776, 777, 782, 783, 787, 788, 789, 791, 792, 793, 798, 799, 803, 808, 809, 816, 818, 820, 821, 827, 828, 830, 831, 833, 834, 835, 838, 839, 841, 843, 845, 865, 868, 874, 875, 876, 882, 883, 884, 885, 887, 888, 894, 898, 903, 905, 907, 916, 920, 921, 926, 934, 935, 936, 939, 940, 942, 943, 944, 945, 951, 953, 956, 957, 974, 981, 983, 984, 985, 989, 991, 992, 994, 1000, 1004, 1005, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1018, 1019, 1020, 1022, 1023, 1026, 1028, 1032, 1038, 1041, 1042, 1043, 1045, 1050, 1055, 1061, 1063, 1065, 1070, 1071, 1077, 1078, 1079, 1081, 1083, 1086, 1088, 1090, 1091, 1093, 1094, 1095, 1099, 1109, 1110, 1119, 1132, 1135, 1149, 1154, 1184, 1186, 1196], "correspond": [0, 1, 2, 155, 165, 167, 184, 191, 192, 193, 397, 423, 440, 1038, 1063, 1096, 1109, 1117, 1120, 1129, 1170], "relation_fil": 0, "extens": [0, 498, 616, 1111, 1112, 1116, 1120, 1126, 1139, 1163], "foodon": 0, "03315258": 0, "style": [0, 510, 701, 1116, 1126], "hint": [0, 1126], "pretenti": 0, "food": [0, 1121], "critic": 0, "pancak": 0, "humbl": 0, "delight": 0, "realm": [0, 1111], "breakfast": 0, "fare": 0, "delect": 0, "disc": 0, "gastronom": 0, "style_hint": 0, "descript": [0, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 165, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 232, 233, 234, 235, 236, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 281, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 328, 332, 333, 334, 335, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 400, 404, 405, 406, 407, 408, 409, 410, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 491, 492, 498, 500, 502, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 524, 525, 526, 529, 530, 531, 532, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 578, 579, 580, 581, 582, 583, 585, 586, 587, 588, 589, 590, 591, 592, 594, 595, 596, 597, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 630, 633, 638, 639, 640, 641, 644, 647, 648, 649, 650, 651, 652, 655, 658, 660, 661, 662, 663, 664, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 679, 680, 688, 695, 696, 697, 698, 699, 701, 707, 708, 709, 710, 711, 712, 713, 714, 719, 720, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 764, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 802, 803, 804, 805, 806, 807, 808, 809, 810, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 866, 867, 868, 869, 871, 872, 873, 875, 876, 877, 878, 879, 880, 882, 883, 884, 885, 886, 888, 889, 890, 891, 892, 893, 895, 896, 897, 898, 899, 900, 901, 902, 904, 905, 906, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 925, 939, 942, 943, 944, 945, 949, 950, 951, 952, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 996, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1054, 1058, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1109, 1120, 1121, 1126, 1129, 1143, 1178], "written": [0, 1112, 1119, 1136], "patch_format": 0, "iao": [0, 397, 429, 479, 483, 488, 491, 506, 508, 509, 510, 511, 512, 515, 524, 530, 533, 536, 538, 543, 544, 548, 553, 573, 578, 579, 586, 587, 592, 600, 602, 606, 607, 613, 649, 667, 668, 669, 1110, 1118, 1170], "spatial": 0, "min_descend": 0, "duplic": 0, "lso": 0, "foo_rul": 0, "foo_syn": 0, "NOT": [0, 479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 679, 942, 958, 1127, 1138, 1163, 1170, 1186], "directli": [0, 1, 22, 28, 115, 161, 227, 251, 276, 296, 329, 375, 408, 418, 485, 538, 544, 545, 550, 705, 764, 771, 843, 846, 945, 947, 997, 1052, 1053, 1059, 1109, 1113, 1116, 1121, 1126, 1132, 1136, 1139, 1143, 1144, 1145, 1159, 1166, 1169], "y": 0, "nuclear": [0, 1170], "veri": [0, 1, 1103, 1105, 1107, 1110, 1112, 1117, 1119, 1126, 1132, 1143, 1158, 1163], "rules_datamodel": 0, "matcher_rul": [0, 275, 328], "rules_express": 0, "encod": [0, 1, 14, 15, 25, 46, 105, 106, 112, 127, 147, 148, 157, 165, 217, 218, 223, 236, 262, 263, 272, 281, 307, 308, 323, 335, 394, 395, 411, 440, 518, 519, 541, 616, 690, 691, 702, 720, 757, 758, 765, 783, 833, 834, 839, 885, 934, 935, 940, 956, 983, 984, 989, 1004, 1041, 1042, 1055, 1070, 1117, 1121, 1134], "patterns_fil": 0, "origin": [0, 46, 73, 74, 75, 271, 279, 281, 321, 333, 335, 1118, 1170], "analyz": 0, "consist": [0, 155, 165, 184, 190, 193, 1051, 1062, 1070, 1085, 1103, 1109, 1112, 1113, 1116, 1135, 1176, 1177], "progress": [0, 1123], "unmelt": 0, "wide": [0, 1109, 1110, 1111, 1119, 1126], "minim": [0, 408, 440, 1105, 1170, 1175], "few": [0, 275, 328, 996, 1105, 1108, 1143, 1163], "xref": [0, 376, 383, 397, 408, 414, 420, 423, 440, 845, 885, 889, 891, 1110, 1117, 1120, 1132, 1180], "multivalu": [0, 3, 4, 17, 20, 22, 24, 32, 33, 36, 37, 66, 67, 80, 84, 85, 87, 88, 90, 92, 96, 133, 155, 159, 185, 186, 190, 191, 214, 215, 225, 229, 230, 235, 239, 240, 241, 242, 249, 264, 265, 266, 267, 271, 280, 285, 286, 287, 289, 293, 309, 310, 311, 312, 314, 319, 321, 322, 334, 341, 346, 347, 350, 351, 352, 357, 360, 364, 365, 370, 371, 376, 383, 384, 385, 388, 391, 392, 396, 397, 406, 408, 414, 420, 422, 423, 424, 425, 426, 427, 431, 432, 433, 434, 435, 437, 438, 445, 448, 449, 456, 457, 460, 463, 466, 467, 469, 470, 478, 479, 483, 488, 491, 492, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 524, 525, 530, 533, 536, 538, 539, 540, 543, 544, 545, 548, 553, 557, 558, 561, 562, 563, 565, 566, 567, 569, 571, 572, 573, 574, 575, 578, 579, 580, 583, 585, 586, 587, 588, 589, 591, 592, 595, 596, 597, 599, 601, 603, 604, 605, 607, 609, 610, 613, 615, 628, 638, 639, 640, 647, 650, 652, 655, 657, 658, 660, 662, 663, 664, 665, 667, 669, 671, 680, 695, 696, 699, 707, 708, 710, 714, 727, 734, 737, 740, 769, 795, 800, 805, 810, 820, 830, 831, 843, 845, 849, 857, 859, 860, 866, 869, 877, 879, 890, 891, 892, 900, 904, 909, 915, 942, 944, 951, 952, 958, 959, 961, 962, 963, 965, 967, 972, 991, 992, 993, 999, 1000, 1012, 1013, 1020, 1028, 1051, 1052, 1061, 1062, 1085, 1097], "mixtur": [0, 1102], "boolean": [0, 3, 4, 17, 21, 22, 42, 45, 46, 47, 48, 49, 50, 51, 53, 71, 78, 82, 83, 95, 117, 123, 127, 165, 166, 169, 178, 236, 271, 281, 291, 313, 321, 335, 348, 366, 397, 414, 430, 440, 441, 479, 483, 488, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 581, 616, 623, 624, 625, 626, 627, 696, 698, 713, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 726, 783, 885, 942, 944, 949, 950, 954, 956, 964, 966, 971, 991, 992, 1003, 1004, 1006, 1043, 1049, 1050, 1067, 1070, 1074, 1082, 1092, 1170], "stato": 0, "ontobe": [0, 830, 1106, 1109, 1131, 1134, 1139, 1144, 1155, 1165, 1168], "0000286": 0, "0000287": 0, "forest": 0, "subtyp": [0, 407, 440, 1145], "hypothesi": 0, "oper": [0, 251, 281, 296, 335, 696, 720, 1051, 1070, 1085, 1103, 1105, 1109, 1111, 1116, 1120, 1121, 1131, 1132, 1133, 1135, 1139, 1140, 1143, 1155, 1170, 1172, 1173, 1174, 1175, 1176, 1178, 1179, 1180, 1182, 1185], "frequenc": [0, 1121, 1181], "equal": [0, 1064, 1175], "divid": [0, 768, 780, 783, 786, 1109, 1121], "total": [0, 95, 119, 127, 135, 1121], "corpu": [0, 1121, 1181], "ic": [0, 768, 775, 783, 784, 797, 807, 1121, 1181], "4023093": 0, "ones": [0, 1112], "multilingu": [0, 1114, 1170, 1174, 1196], "sql": [0, 701, 745, 1102, 1103, 1105, 1109, 1120, 1127, 1132, 1134, 1138, 1140, 1143, 1144, 1155, 1168, 1170, 1185, 1186], "restrict": [0, 1, 384, 385, 389, 391, 396, 422, 425, 436, 440, 458, 479, 483, 486, 488, 491, 492, 506, 509, 511, 512, 515, 524, 533, 538, 539, 543, 544, 548, 552, 555, 556, 559, 564, 571, 579, 583, 585, 588, 598, 606, 616, 618, 619, 647, 648, 652, 655, 657, 658, 662, 664, 669, 673, 1109, 1116, 1120, 1135, 1167, 1170, 1176], "fr": [0, 2, 142, 1119, 1170], "hpintern": 0, "0020110": 0, "pivot": 0, "per": [0, 397, 427, 1061, 1073, 1103, 1109, 1119, 1121, 1170, 1182, 1196], "multi": [0, 392, 1110, 1132], "lingual": 0, "rather": [0, 2, 944, 949, 956, 1109, 1118, 1120, 1139, 1144], "avail": [0, 1105, 1109, 1137, 1138, 1177, 1184, 1186], "cob": [0, 1109, 1170], "wrapper": [0, 1109, 1126, 1148], "onto": [0, 845, 885, 1109, 1111, 1126, 1148], "basicontologyinterfac": [0, 1, 204, 1110, 1118, 1133, 1143, 1151, 1170, 1172, 1174, 1179, 1182, 1185, 1186, 1196], "basic_ontology_interfac": [0, 1151, 1170], "tool": [0, 1, 4, 49, 51, 214, 229, 1105, 1109, 1111, 1116, 1121, 1123, 1129, 1136, 1163], "preprocess": 0, "step": [0, 1123, 1131, 1139, 1184], "addl": 0, "second": [0, 165, 193, 768, 783, 796, 798, 799, 1109, 1121, 1127, 1170, 1172], "member": [0, 510, 513, 514, 530, 553, 587, 601, 603, 604, 609, 616, 631], "omit": [0, 1, 1119, 1136, 1166, 1170, 1186], "trivial": [0, 1109, 1113, 1116, 1170], "reciproc": [0, 944, 968, 1178], "feed": [0, 1132], "nativ": [0, 3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 96, 155, 159, 214, 215, 219, 225, 229, 251, 252, 264, 265, 266, 267, 271, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 512, 515, 524, 525, 529, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 680, 695, 696, 698, 699, 746, 764, 767, 768, 769, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 939, 942, 943, 944, 945, 981, 991, 992, 993, 994, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1058, 1061, 1062, 1063, 1102, 1109, 1122, 1139, 1148], "faster": [0, 1121, 1170], "custom": [0, 1110, 1114, 1116, 1129, 1163, 1166], "match_rul": 0, "packag": [0, 2, 339, 1105, 1113, 1126, 1129, 1132, 1133, 1136, 1148, 1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177, 1188, 1197], "lexical_index": [0, 283, 337, 338, 1168, 1174, 1184], "modul": [0, 1129, 1130, 1144, 1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "fragment": [0, 1122], "local": [0, 27, 46, 114, 127, 160, 165, 226, 236, 274, 281, 327, 335, 417, 440, 547, 616, 704, 720, 770, 783, 844, 885, 946, 956, 995, 1004, 1057, 1070, 1106, 1109, 1113, 1119, 1131, 1134, 1139, 1140, 1143, 1144, 1161, 1162, 1163, 1165, 1166, 1169, 1174, 1184, 1186, 1196], "semant": [0, 1, 2, 204, 376, 383, 385, 397, 408, 414, 420, 478, 745, 1103, 1109, 1111, 1113, 1119, 1121, 1127, 1130, 1134, 1138, 1166, 1168, 1174, 1186, 1196], "load": [0, 1105, 1106, 1111, 1120, 1121, 1138, 1140, 1143, 1148, 1157, 1162, 1164, 1166, 1176, 1186], "ensur": [0, 1135, 1138, 1144, 1157, 1162, 1164], "strict": [0, 1109, 1111, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "clean": 0, "befor": [0, 313, 335, 354, 1108, 1116, 1132, 1151], "highli": [0, 1109, 1122, 1143, 1152, 1170, 1185], "incomplet": [0, 1121, 1152, 1163, 1164], "syntact": [0, 1105], "whitespac": [0, 275, 328, 996], "trail": 0, "compliant": 0, "execut": [0, 1049, 1061, 1067, 1070, 1073, 1083, 1086, 1097, 1100, 1109, 1170], "mode": [0, 202, 295, 373, 472, 672, 744, 813, 917, 1029, 1098], "workflow": [0, 1126], "emit": [0, 1134], "manual": [0, 4, 50, 1116, 1118, 1180, 1196], "check": [0, 1, 19, 109, 153, 222, 270, 317, 402, 534, 694, 763, 837, 938, 987, 1038, 1043, 1048, 1063, 1065, 1066, 1068, 1070, 1071, 1072, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1087, 1088, 1089, 1090, 1091, 1093, 1094, 1095, 1096, 1099, 1116, 1127, 1170, 1177, 1185], "examin": [0, 155, 165, 1183], "report_format": 0, "propos": [0, 479, 483, 488, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 570, 571, 944, 950, 956, 1109, 1129, 1139], "noth": [0, 1170, 1172, 1173, 1175, 1179, 1180, 1182, 1185], "branch": [0, 1126, 1183], "physic": 0, "qualiti": [0, 1132], "render": 0, "definedclassid": [0, 396, 440, 1116], "0045071": 0, "genusid": [0, 396, 440, 1116, 1176], "0001439": 0, "fillerid": [0, 389, 440, 1116, 1176], "0000461": 0, "propertyid": [0, 389, 440, 1116, 1176], "ro": [0, 488, 491, 533, 548, 621, 622, 639, 666, 939, 942, 958, 959, 962, 1103, 1109, 1116, 1120, 1133, 1134, 1138, 1140, 1170], "0015010": 0, "flatten": 0, "choos": [0, 1112, 1113, 1116, 1120, 1135, 1170, 1176, 1184, 1185], "ax": 0, "filler": [0, 389, 436, 440, 1116, 1140, 1170, 1176, 1179], "genu": [0, 396, 428, 437, 440, 446, 463, 479, 498, 508, 512, 515, 524, 544, 578, 1126, 1176], "repeat": [0, 1143], "prop_1": 0, "prop_2": 0, "differentia": [0, 396, 440, 463, 479, 498, 508, 512, 515, 524, 544, 578, 1126, 1176], "what": [0, 1, 768, 774, 1106, 1109, 1114, 1120, 1123, 1126, 1135], "inspect": 0, "nest": [0, 408, 1116], "logicaldefinit": 0, "matrix_ax": 0, "retriev": [0, 1118, 1169, 1170, 1183, 1196], "subset_siren": 0, "maps_to_sourc": 0, "mapper": [0, 1119, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "rewir": [0, 1178], "instanc": [0, 1, 14, 15, 25, 105, 106, 112, 147, 148, 157, 217, 218, 223, 262, 263, 272, 307, 308, 323, 384, 394, 395, 411, 440, 479, 512, 513, 514, 518, 519, 524, 530, 541, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 628, 638, 649, 650, 658, 661, 667, 668, 669, 671, 690, 691, 702, 757, 758, 765, 833, 834, 839, 934, 935, 939, 940, 943, 983, 984, 989, 1038, 1041, 1042, 1055, 1063, 1064, 1070, 1071, 1072, 1076, 1079, 1080, 1087, 1088, 1089, 1096, 1109, 1112, 1158, 1170], "target": [0, 2, 387, 450, 1110, 1145, 1147, 1148, 1149, 1169, 1171, 1175, 1176], "src1": 0, "tgt1": 0, "src2": 0, "tgt2": 0, "migrate_curi": [0, 1174, 1178], "patcherinterfac": [0, 1139, 1174, 1178], "patcher": [0, 1102, 1109, 1164, 1168, 1174], "patcher_interfac": [0, 1178], "curie_pair": 0, "updat": [0, 40, 46, 479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 575, 616, 1139, 1140, 1163], "translat": [0, 28, 115, 161, 227, 276, 329, 385, 389, 391, 418, 434, 550, 705, 771, 846, 947, 997, 1059, 1118, 1169, 1171], "hgnc": [0, 225, 235, 1161], "ncbigen": [0, 1161], "0000187": 0, "0000188": 0, "taxonconstraint": [0, 939, 942, 943, 949, 950, 951, 952, 954, 956, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 972], "replaced_bi": [0, 479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599], "pre": [0, 1108, 1120, 1121, 1138, 1167, 1175, 1181, 1184, 1186], "yet": [0, 1118, 1127, 1170, 1186, 1196], "shortest": [0, 1176], "cytoplasm": [0, 1120, 1162, 1170], "thylakoid": 0, "4": [0, 1109, 1110, 1116, 1119, 1126, 1128, 1130, 1131, 1162], "end": [0, 2, 397, 414, 423, 440, 468, 842, 878, 885, 1120, 1132, 1166, 1170, 1176], "start_nod": 0, "end_nod": 0, "weight": [0, 318, 335], "0001": 0, "999": 0, "after": [0, 2, 1103, 1105, 1132, 1136, 1152, 1159, 1170, 1172, 1173, 1175, 1178, 1179, 1180, 1182, 1185, 1197], "visual": [0, 1120, 1130, 1131, 1135], "narrow": [0, 318, 356, 409, 410], "gap": 0, "flat": [0, 1102, 1118], "point": [0, 14, 15, 105, 106, 147, 148, 217, 218, 262, 263, 307, 308, 394, 395, 518, 519, 690, 691, 757, 758, 833, 834, 934, 935, 942, 956, 958, 959, 983, 984, 1041, 1042, 1120, 1121, 1129, 1170, 1196], "exclude_pred": 0, "predicate_weight": [0, 1176], "stylemap": 0, "berkeleybop": 0, "kgviz": 0, "round": [0, 1171], "declar": [0, 214, 391, 392, 405, 440, 447, 455, 456, 1177], "thei": [0, 1, 204, 1107, 1109, 1116, 1118, 1120, 1121, 1122, 1132, 1134, 1135, 1138, 1143, 1148, 1165, 1170, 1171, 1174], "appear": [0, 1, 1122, 1148], "shacl": [0, 498, 616, 1038, 1063, 1096, 1127, 1185], "prefixdeclar": [0, 391, 392, 440, 447, 455, 456], "cl_": [0, 1113], "prefixmap": [0, 1114], "arbitrari": [0, 3, 10, 17, 22, 46, 80, 101, 127, 141, 165, 210, 236, 258, 281, 303, 335, 382, 408, 440, 451, 497, 616, 685, 720, 752, 783, 825, 885, 930, 956, 978, 1004, 1036, 1070, 1105, 1170, 1180], "sparql": [0, 25, 46, 112, 127, 157, 165, 223, 236, 272, 281, 323, 335, 411, 440, 541, 616, 702, 720, 765, 783, 839, 885, 940, 956, 989, 1004, 1055, 1070, 1109, 1119, 1134, 1140, 1143, 1144, 1155, 1159, 1167, 1168, 1170, 1186], "label_field": 0, "down": [0, 828, 882, 883, 885, 1176], "lung": 0, "And": [0, 1, 1112, 1116, 1120, 1126, 1129, 1132, 1133, 1134], "arteri": 0, "suppli": [0, 1113, 1175, 1176], "0002178": 0, "indirect": [0, 845, 879, 885, 1120, 1179], "tbox": 0, "subclass": [0, 385, 391, 422, 440, 845, 885, 911, 1103, 1118, 1132, 1145, 1170, 1177, 1196], "existenti": [0, 384, 389, 391, 425, 434, 436, 440, 458, 1109, 1116, 1120, 1170], "abox": 0, "assert": [0, 142, 376, 383, 397, 414, 420, 440, 441, 443, 446, 453, 468, 470, 475, 476, 478, 845, 885, 914, 915, 944, 956, 970, 972, 1109, 1118, 1120, 1132, 1134, 1169, 1170, 1171, 1185], "dimens": 0, "remaind": 0, "wb": 0, "0032502": 0, "0007568": 0, "0048869": 0, "0098727": 0, "0008152": [0, 1], "0009056": 0, "0044238": 0, "1901275": 0, "0050896": 0, "0051716": 0, "0051606": 0, "0014823": 0, "0023052": 0, "wbgene00000417": 0, "wbgene00000912": 0, "wbgene00000898": 0, "wbgene00006752": 0, "object_group": 0, "top": [0, 1112, 1129, 1135, 1196], "sometim": [0, 1, 1109, 1110, 1116, 1117, 1118, 1121, 1126, 1135, 1186], "unintuit": 0, "has_prefix": 0, "disk": [0, 1105, 1134, 1186], "substr": [0, 325, 335, 342, 361], "rank": [0, 3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 313, 314, 318, 319, 321, 325, 326, 328, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 400, 405, 406, 407, 408, 409, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 483, 488, 491, 492, 498, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 521, 522, 523, 524, 525, 530, 533, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 679, 680, 688, 695, 696, 697, 698, 699, 701, 707, 708, 709, 710, 711, 713, 714, 719, 720, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 736, 737, 739, 740, 741, 742, 743, 746, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 820, 828, 831, 838, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 925, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 996, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1054, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1132, 1152, 1180], "your": [0, 2, 1103, 1108, 1113, 1123, 1126, 1129, 1131, 1132, 1133, 1144, 1152, 1161, 1163], "broad": [0, 1, 31, 46, 318, 356, 383, 409, 410, 1109, 1126, 1134], "relev": [0, 698, 720, 735, 1109, 1132, 1152, 1180], "There": [0, 1103, 1105, 1109, 1110, 1111, 1120, 1121, 1132, 1134, 1135, 1138, 1143], "stream": [0, 1102, 1127], "ctrl": [0, 1132], "stop": 0, "unifi": [0, 720, 738, 1110, 1132], "across": [0, 164, 165, 392, 440, 479, 488, 508, 512, 515, 524, 544, 628, 1108, 1134], "keyval": 0, "set1": 0, "terms1": 0, "set2": 0, "terms2": 0, "altern": [0, 322, 335, 358, 362, 1110, 1112, 1123, 1157, 1159, 1162, 1164, 1171], "term_1": 0, "term_2": 0, "term_n": 0, "term_m": 0, "select": [0, 768, 774, 1105, 1109, 1114, 1123, 1166, 1182], "ma": [0, 1117], "mix": [0, 41, 42, 166, 167, 175, 181, 184, 193, 198, 199, 484, 492, 500, 505, 506, 507, 508, 509, 510, 511, 529, 535, 539, 540, 633, 981], "pipelin": [0, 265, 267, 271, 281, 310, 312, 321, 335, 1184], "phenotyp": [0, 31, 46, 1109, 1111, 1112, 1121, 1170], "0000118": [0, 479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 553, 1110, 1170], "done": [0, 155, 165, 1109, 1112, 1113, 1120, 1121, 1126, 1138], "compactli": 0, "set1_fil": 0, "set2_fil": 0, "jaccard": [0, 768, 783, 802, 1109, 1114, 1181], "min_jaccard_similar": [0, 1181], "score": [0, 746, 768, 775, 780, 781, 783, 784, 785, 786, 797, 801, 802, 807, 811, 812, 814, 1121, 1167, 1169, 1181], "min_ancestor_information_cont": [0, 1181], "main_score_field": 0, "phenodigm_scor": [0, 768, 783, 803], "information_content_fil": 0, "varieti": [0, 1105, 1109, 1110, 1111, 1119, 1132, 1140, 1174], "metric": [0, 769, 783, 1121, 1183], "deprec": [0, 397, 414, 440, 441, 479, 480, 483, 488, 491, 502, 506, 509, 512, 515, 521, 522, 523, 524, 529, 531, 533, 535, 538, 543, 544, 548, 566, 570, 571, 590, 597, 599, 606, 616, 623, 624, 625, 626, 627, 640, 643, 644, 660, 668, 674, 696, 719, 721, 845, 872, 873, 885, 893, 896, 897, 1064, 1118, 1170, 1175, 1186, 1196], "0000540": [0, 1102], "0000000": 0, "hard": 0, "0001750": 0, "stage": [0, 1143, 1144], "found": [0, 1, 155, 165, 698, 720, 730, 942, 956, 958, 959, 1119, 1126, 1156, 1167, 1170, 1174, 1176], "adult": [0, 1132], "mrca": [0, 768, 774, 1121, 1181], "upheno": 0, "anatomi": [0, 1110, 1121, 1132], "0010922": 0, "0010616": 0, "0000001": [0, 1109, 1120, 1148, 1175], "pr": [0, 2, 1104, 1109, 1133, 1137, 1181], "break": [0, 830], "collect": [0, 1, 20, 24, 32, 33, 46, 57, 58, 59, 60, 62, 63, 64, 65, 81, 90, 96, 127, 133, 159, 165, 176, 185, 194, 204, 267, 281, 284, 293, 312, 314, 335, 344, 345, 362, 370, 375, 376, 383, 384, 385, 387, 388, 391, 392, 396, 397, 399, 406, 408, 414, 420, 422, 423, 427, 429, 430, 433, 434, 435, 438, 439, 440, 444, 445, 446, 449, 456, 457, 466, 467, 469, 470, 477, 478, 513, 514, 530, 543, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 585, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 623, 626, 628, 638, 649, 650, 655, 658, 660, 661, 667, 668, 669, 671, 830, 993, 999, 1004, 1051, 1052, 1062, 1070, 1085, 1109, 1126, 1140, 1143, 1163, 1169, 1170, 1175, 1176, 1181], "Its": 0, "non": [0, 1, 6, 21, 45, 46, 97, 137, 142, 206, 254, 275, 299, 328, 378, 483, 485, 488, 493, 513, 514, 530, 553, 554, 555, 556, 557, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 576, 578, 579, 580, 581, 585, 586, 587, 590, 591, 592, 594, 595, 596, 597, 599, 600, 601, 602, 603, 604, 605, 606, 609, 610, 611, 612, 613, 615, 616, 620, 621, 622, 623, 625, 626, 628, 638, 640, 649, 650, 655, 658, 660, 661, 663, 667, 668, 669, 671, 674, 681, 748, 821, 845, 885, 896, 897, 926, 974, 996, 1032, 1105, 1109, 1114, 1126, 1132, 1159, 1182, 1196], "lot": [0, 1, 1102, 1110, 1112, 1117, 1120, 1132], "mechan": [0, 1126, 1196], "releas": [0, 1, 1105, 1120, 1123, 1170], "product": [0, 768, 780, 783, 1111, 1116, 1118], "complic": [0, 1116], "naiv": [0, 1182], "kind": [0, 1, 408, 440, 443, 446, 453, 475, 476, 478, 720, 738, 783, 803, 818, 882, 883, 885, 1104, 1109, 1110, 1111, 1112, 1116, 1126, 1139, 1140, 1170, 1185], "summarystatist": [0, 1183], "broken": [0, 828, 830, 831, 882, 883, 885, 904], "dynam": [0, 1126], "rel": [0, 1110, 1120, 1121, 1133, 1134, 1140, 1162, 1170], "v2": 0, "v1": 0, "stat": [0, 830, 831, 904, 1183], "accordingli": 0, "residu": 0, "compare_with": 0, "concept": [0, 2, 491, 720, 738, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 783, 784, 786, 794, 795, 796, 797, 798, 799, 800, 802, 805, 806, 807, 808, 809, 810, 1109, 1110, 1113, 1114, 1115, 1116, 1117, 1118, 1120, 1122, 1131, 1132, 1139, 1148, 1170, 1176, 1184], "goslim_gener": [0, 1170], "portion": [0, 981, 991, 1004, 1022, 1112, 1163], "ncbi": [0, 1121, 1161], "taxonomi": [0, 1112], "0034357": [0, 1171], "0003884": [0, 1174], "0003941": 0, "taxon_constraints_util": 0, "ancestr": 0, "category_system": 0, "biolink": [0, 3, 4, 17, 21, 22, 30, 73, 74, 75, 79, 84, 219, 225, 234, 247, 479, 483, 491, 505, 512, 515, 524, 533, 538, 543, 544, 548, 560, 1109, 1167], "dbpedia": 0, "hasdbxref": [0, 376, 408, 414, 420, 478, 479, 483, 488, 491, 507, 512, 515, 524, 533, 538, 543, 544, 548, 574, 1117, 1170], "without": [0, 845, 864, 885, 1102, 1105, 1109, 1117, 1120, 1131, 1139, 1170, 1171, 1174], "prontolib": [0, 1162], "objectproperti": [0, 1, 407, 479, 483, 487, 491, 513, 514, 515, 524, 529, 530, 535, 536, 538, 539, 543, 545, 548, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 583, 585, 586, 587, 589, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 619, 620, 623, 624, 626, 627, 628, 633, 638, 649, 650, 652, 655, 658, 660, 661, 666, 667, 668, 669, 671, 845, 873, 897, 899, 1109, 1170], "omo": [0, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 1061, 1070, 1086, 1110, 1118, 1119], "annotationproperti": [0, 1, 407, 479, 487, 488, 491, 513, 514, 515, 524, 529, 530, 533, 535, 536, 538, 543, 545, 548, 553, 554, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 585, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 610, 611, 612, 613, 615, 616, 620, 623, 626, 628, 638, 649, 650, 655, 658, 660, 661, 667, 668, 669, 671, 845, 850, 1109, 1170, 1185], "owl_typ": [0, 1170, 1174], "vacuol": [0, 1120, 1170, 1176], "ascii": [0, 1132], "markdown": 0, "instruct": [0, 1107, 1108, 1126, 1133], "analog": [0, 142, 1126], "too": [0, 1105, 1106, 1110, 1112, 1116], "00000372": 0, "00000094": 0, "volcan": 0, "featur": [0, 2, 396, 440, 463, 1104, 1105, 1111, 1112, 1120, 1129, 1132, 1138, 1139, 1140, 1197], "00000247": 0, "volcano": 0, "00000403": 0, "shield": 0, "pyroclast": 0, "view": [0, 1, 204, 1109, 1110, 1116, 1135, 1166, 1170, 1176, 1196], "explod": 0, "subglaci": 0, "alongsid": [0, 1102, 1111, 1127, 1132], "intermedi": [0, 1120], "mud": 0, "recent": [0, 768, 774, 783, 1121, 1181], "max": [0, 1169], "distanc": [0, 1132, 1138, 1176], "00000407": 0, "though": 0, "highlight": [0, 1132], "asterisk": 0, "length": [0, 768, 780, 783, 1064], "extend": [0, 1120, 1121, 1131, 1144, 1176], "max_hop": 0, "trim": [0, 275, 328, 996], "skip": [0, 1116], "against": [0, 319, 335, 341, 346, 347, 357, 364, 365, 371, 831, 843, 845, 866, 885, 1038, 1063, 1096, 1105, 1109, 1169, 1172, 1181, 1185], "ecto": 0, "ontology_metadata": [0, 1127], "heurist": [0, 1116, 1170], "align": [0, 1, 376, 397, 408, 414, 420, 478, 1109, 1140], "guid": [0, 1, 1103, 1106, 1107, 1109, 1112, 1115, 1126, 1130, 1169, 1182, 1185], "howto": [0, 1185], "50": [0, 1176], "presenc": 0, "mine": [0, 1114], "machin": [0, 397, 440, 1109, 1114, 1129, 1154, 1196], "action": [0, 2], "initi": [0, 1109, 1129, 1155, 1159, 1167], "lag": [0, 1132], "0002053": 0, "hierarchi": [0, 1112], "larg": [0, 1, 830, 1105, 1107, 1109, 1110, 1116, 1118, 1121, 1123, 1130, 1132, 1143, 1144, 1174, 1179, 1180], "focus": [0, 1120, 1121], "sole": [0, 1109], "bad": 0, "attempt": [0, 1110, 1112, 1122, 1127, 1132, 1134, 1148, 1167], "download": [0, 1105, 1112, 1127, 1131, 1132, 1136, 1140, 1143, 1176, 1186], "resolv": 0, "foreign": 0, "nnnnnnn": 0, "wildcard": [0, 701], "applic": [0, 21, 1102, 1105, 1109, 1110, 1135, 1143, 1144, 1178], "determinist": [0, 1126], "exactmatch": [0, 479, 483, 491, 507, 512, 515, 524, 533, 538, 543, 544, 545, 548, 616, 632], "cardin": [0, 1, 3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 96, 150, 155, 159, 165, 182, 200, 214, 215, 219, 225, 251, 252, 264, 265, 266, 267, 271, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 512, 515, 524, 525, 529, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 616, 631, 680, 695, 696, 698, 699, 746, 764, 767, 768, 769, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 939, 942, 943, 944, 945, 981, 991, 992, 993, 994, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1058, 1061, 1062, 1063, 1064], "expect": [0, 1113, 1116, 1161], "bespok": 0, "might": [0, 1, 31, 46, 383, 1109, 1112, 1116, 1121, 1129, 1132, 1184, 1185, 1196], "boomer": 0, "probabilist": 0, "reason": [0, 397, 427, 845, 885, 893, 944, 949, 1106, 1109, 1114, 1118, 1122, 1129, 1132, 1170, 1177, 1185], "qualit": 0, "adapter_map": 0, "except": [0, 1117, 1118, 1170, 1176, 1178], "want": [0, 1106, 1110, 1111, 1114, 1120, 1121, 1129, 1132, 1138, 1139, 1186], "obographviz": [0, 1131, 1135], "meant": 0, "0002202": [0, 1120, 1138, 1140], "abbrevi": [0, 416, 1131], "open": [0, 31, 46, 397, 414, 423, 440, 468, 480, 481, 1107, 1111, 1120, 1134, 1136, 1169, 1170], "imag": [0, 479, 483, 487, 491, 511, 512, 513, 514, 524, 529, 530, 533, 535, 536, 538, 543, 544, 545, 548, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 613, 615, 616, 617, 620, 628, 638, 649, 650, 658, 661, 667, 668, 669, 671, 1132, 1163], "meta": [0, 375, 376, 383, 384, 385, 387, 388, 391, 392, 396, 399, 406, 408, 414, 420, 423, 427, 429, 430, 440, 451, 467, 470, 477, 478, 1170, 1176], "note": [1, 2, 4, 21, 22, 49, 51, 78, 219, 225, 232, 251, 296, 339, 375, 389, 391, 408, 416, 434, 485, 488, 538, 544, 545, 616, 746, 764, 788, 843, 942, 945, 959, 1052, 1053, 1105, 1108, 1109, 1110, 1112, 1114, 1116, 1118, 1119, 1121, 1126, 1132, 1139, 1143, 1152, 1161, 1163, 1166, 1169, 1170, 1172, 1175, 1176, 1177, 1183, 1195, 1196], "replac": [1, 325, 335, 506, 697, 1110, 1118, 1122, 1148, 1170, 1175, 1176, 1178, 1196], "describ": [1, 4, 30, 31, 34, 36, 46, 47, 48, 49, 50, 51, 54, 55, 56, 69, 70, 71, 72, 79, 82, 83, 84, 86, 91, 214, 236, 242, 1050, 1127, 1139, 1143, 1172, 1186], "arch": 1, "librari": [1, 204, 1105, 1109, 1112, 1114, 1121, 1129, 1130, 1131, 1135, 1136, 1137, 1138, 1140, 1143, 1159, 1162, 1166, 1186, 1195], "impos": [1, 1113], "own": [1, 1110, 1112, 1113, 1122, 1123, 1131, 1170, 1186], "world": [1, 1111, 1185], "intend": [1, 720, 738, 1105, 1107, 1109, 1110, 1111, 1116, 1119, 1143, 1164, 1170, 1171, 1196], "lingua": 1, "franca": 1, "keep": [1, 2, 21, 46, 78], "rang": [1, 3, 4, 17, 20, 21, 22, 23, 24, 28, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 115, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 155, 159, 161, 163, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 214, 215, 219, 225, 227, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 276, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 329, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 418, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 521, 522, 523, 524, 525, 529, 530, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 550, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 680, 695, 696, 698, 699, 705, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 764, 767, 768, 769, 771, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 846, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 939, 942, 943, 944, 945, 947, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 997, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1058, 1059, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1105, 1111, 1126, 1132, 1159, 1186], "address": [1, 1109], "user": [1, 397, 427, 696, 710, 712, 713, 719, 720, 721, 722, 723, 725, 734, 740, 742, 1105, 1110, 1112, 1116, 1120, 1121, 1132, 1135, 1144, 1166, 1182, 1184, 1186], "quit": [1, 1169], "straightforward": 1, "someth": [1, 214, 229, 409, 526, 616, 1107, 1109, 1110, 1111, 1126, 1129], "paper": 1, "2000": 1, "thousand": [1, 1144], "inter": [1, 1145], "term": [1, 4, 31, 46, 50, 55, 70, 71, 95, 117, 123, 127, 214, 230, 236, 264, 266, 271, 275, 278, 279, 281, 282, 285, 286, 288, 289, 290, 291, 294, 309, 311, 321, 328, 332, 333, 335, 337, 350, 351, 355, 360, 363, 366, 372, 391, 396, 409, 428, 437, 440, 445, 446, 451, 463, 479, 483, 487, 488, 491, 502, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 524, 525, 529, 530, 533, 535, 536, 538, 543, 545, 548, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 585, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 623, 626, 628, 638, 649, 650, 655, 658, 660, 661, 663, 667, 668, 669, 671, 696, 698, 701, 720, 723, 728, 729, 731, 732, 740, 742, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 783, 786, 794, 795, 796, 797, 798, 799, 800, 802, 805, 806, 807, 808, 809, 810, 939, 942, 943, 944, 953, 955, 956, 957, 958, 959, 961, 962, 963, 968, 971, 972, 996, 1109, 1110, 1111, 1112, 1116, 1118, 1120, 1121, 1122, 1126, 1131, 1133, 1136, 1139, 1140, 1144, 1152, 1169, 1170, 1171, 1175, 1179, 1180, 1181, 1182, 1184, 1185, 1186, 1196, 1197], "howev": [1, 1105, 1107, 1109, 1110, 1111, 1113, 1116, 1120, 1121, 1122, 1126, 1132, 1134, 1144, 1166, 1196], "turn": [1, 1119, 1195], "flexibl": [1, 1109], "malleabl": 1, "prov": [1, 214, 249, 251, 296, 479, 483, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 567, 572, 816, 842, 848, 878, 910, 922, 1062], "logic": [1, 391, 397, 431, 440, 445, 483, 488, 498, 513, 514, 530, 533, 539, 553, 554, 555, 556, 557, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 576, 578, 579, 580, 581, 583, 585, 586, 587, 589, 590, 591, 592, 594, 595, 596, 597, 599, 600, 601, 602, 603, 604, 605, 606, 609, 610, 611, 612, 613, 615, 616, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 638, 640, 649, 650, 652, 655, 658, 660, 661, 663, 666, 667, 668, 669, 671, 674, 845, 875, 885, 1103, 1107, 1109, 1111, 1112, 1114, 1120, 1134, 1170, 1176, 1185, 1196], "artifact": 1, "exampl": [1, 204, 214, 219, 225, 232, 235, 236, 249, 479, 483, 491, 511, 512, 515, 524, 533, 538, 543, 544, 548, 592, 645, 697, 828, 830, 831, 904, 1102, 1106, 1107, 1108, 1109, 1110, 1112, 1114, 1116, 1118, 1119, 1121, 1122, 1123, 1126, 1127, 1130, 1131, 1132, 1134, 1136, 1144, 1148, 1155, 1168, 1169, 1171, 1172, 1174, 1176, 1177, 1180, 1184, 1185, 1196, 1197], "countri": 1, "knowledg": [1, 3, 4, 17, 21, 22, 30, 46, 79, 1107, 1109, 1112, 1121, 1126, 1132, 1133, 1134, 1167, 1169], "entireti": 1, "wikidata": [1, 1058, 1134], "try": [1, 1108, 1132, 1133, 1138, 1139, 1186, 1196], "pluralist": [1, 1102, 1109, 1110, 1135, 1196], "appropri": [1, 1134, 1139], "abstract": [1, 22, 251, 296, 375, 408, 485, 538, 544, 545, 568, 593, 616, 617, 631, 632, 644, 653, 656, 659, 665, 677, 764, 783, 784, 803, 843, 849, 866, 884, 885, 900, 923, 945, 1052, 1053, 1070, 1109, 1119, 1132, 1135, 1138, 1143, 1146, 1163, 1165, 1174, 1179], "commun": [1, 1109, 1114, 1117, 1139], "serv": [1, 1109, 1112, 1140, 1143, 1167, 1170, 1175], "classic": [1, 1121], "those": [1, 214, 229, 397, 423, 440, 1109, 1111, 1117, 1170, 1176], "conceiv": [1, 1121, 1135, 1176], "loos": [1, 1109], "thought": [1, 1120, 1196], "persist": [1, 1109, 1139], "variou": [1, 1109, 1121, 1132, 1139, 1190], "metadata": [1, 4, 50, 204, 214, 229, 230, 231, 233, 236, 239, 241, 242, 243, 244, 249, 375, 376, 383, 384, 385, 387, 388, 391, 392, 396, 397, 399, 406, 408, 414, 420, 440, 446, 508, 578, 628, 645, 845, 850, 885, 1109, 1111, 1112, 1114, 1117, 1122, 1123, 1130, 1134, 1152, 1170, 1175, 1176, 1178, 1180, 1185], "associ": [1, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 204, 405, 408, 440, 443, 446, 447, 453, 475, 476, 478, 842, 885, 922, 1102, 1109, 1110, 1114, 1121, 1130, 1161, 1162, 1165, 1166, 1168, 1170, 1171, 1174, 1186], "predomin": 1, "purpos": [1, 204, 391, 399, 413, 415, 444, 513, 514, 530, 543, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 585, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 623, 626, 628, 638, 649, 650, 655, 658, 660, 661, 667, 668, 669, 671, 720, 738, 1109, 1110, 1111, 1113, 1116, 1120, 1126, 1138, 1143], "necessarili": [1, 1109, 1196], "disjoint": [1, 384, 425, 426, 431, 440, 474, 1109, 1170, 1176, 1177], "categori": [1, 142, 155, 165, 214, 236, 479, 483, 491, 505, 512, 515, 523, 524, 533, 538, 543, 544, 548, 616, 617, 696, 720, 830, 845, 853, 859, 885, 992, 1004, 1043, 1070, 1109, 1120, 1167, 1170], "ambigu": [1, 1109, 1111, 1170], "equat": [1, 384, 440, 473, 1109], "broadli": [1, 1109, 1121], "encompass": [1, 31, 46, 1109, 1170], "scotland": 1, "denot": [1, 1109, 1110, 1112], "strictli": [1, 1108], "three": [1, 1105, 1111], "datatypeproperti": [1, 407, 845, 871, 1109, 1170], "discrimin": 1, "confus": [1, 1106, 1109, 1120, 1186], "ask": [1, 1111, 1120, 1126, 1135, 1170], "think": [1, 1109, 1196], "would": [1, 219, 225, 234, 235, 1105, 1109, 1114, 1116, 1118, 1120, 1121, 1126, 1129, 1143, 1196], "also": [1, 155, 165, 408, 440, 1103, 1105, 1109, 1110, 1111, 1112, 1113, 1116, 1117, 1118, 1120, 1121, 1126, 1129, 1132, 1133, 1134, 1138, 1148, 1155, 1156, 1158, 1159, 1162, 1163, 1167, 1169, 1170, 1175, 1176, 1178, 1180, 1186], "accustom": 1, "stand": [1, 1105, 1112, 1120], "alon": 1, "monolith": 1, "make": [1, 830, 1102, 1104, 1108, 1109, 1110, 1111, 1119, 1120, 1121, 1122, 1126, 1127, 1129, 1132, 1133, 1138, 1139, 1144, 1196], "assumpt": [1, 155, 165, 1119, 1122], "fact": [1, 1112, 1116, 1120, 1132, 1143], "organ": [1, 830, 856, 1109, 1112, 1120, 1167, 1195], "modular": 1, "compon": [1, 498, 616, 1118, 1129, 1176, 1184], "much": [1, 1106, 1143, 1196], "softwar": [1, 1129, 1136], "evolv": 1, "program": [1, 1109, 1112, 1129, 1132, 1133], "incorpor": [1, 1120, 1132], "design": [1, 165, 175, 193, 204, 1106, 1109, 1120, 1126, 1130, 1143, 1148], "worri": [1, 1102, 1132, 1143, 1174], "everyth": [1, 440, 451, 1103, 1109, 1112, 1113, 1120], "were": [1, 1118, 1126, 1134, 1156, 1170], "actual": [1, 945, 956, 1102, 1109, 1120], "let": [1, 1120, 1133], "explor": [1, 1114, 1115, 1121, 1180], "composit": 1, "driven": [1, 1127], "infrastructur": 1, "web": [1, 1107, 1109, 1112, 1113, 1119, 1134, 1136, 1196], "stack": 1, "scienc": [1, 1109, 1132], "bioinformat": [1, 1109, 1120, 1135, 1154], "bridg": [1, 1134], "essenti": [1, 1120], "expand": [1, 6, 97, 137, 206, 254, 275, 299, 328, 378, 493, 681, 748, 821, 926, 974, 996, 1032, 1170, 1176, 1178], "contract": [1, 1170], "seem": [1, 1116, 1143], "surpris": [1, 1132], "construct": [1, 375, 440, 1105, 1109, 1112, 1120, 1122, 1148, 1170, 1196], "call": [1, 1106, 1109, 1111, 1121, 1132, 1139, 1143, 1151, 1170, 1195], "owlinterfac": [1, 204, 1131, 1153, 1174, 1177], "rdfinterfac": 1, "common": [1, 31, 46, 318, 374, 768, 774, 783, 1107, 1109, 1110, 1112, 1116, 1118, 1119, 1120, 1121, 1130, 1132, 1140, 1143, 1144, 1174, 1181], "opaqu": 1, "exactli": [1, 142, 155, 163, 165, 166, 1144], "human": [1, 31, 46, 149, 165, 167, 391, 397, 399, 413, 415, 440, 444, 512, 513, 514, 520, 526, 530, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 628, 638, 649, 650, 658, 661, 667, 668, 669, 671, 697, 939, 942, 943, 945, 956, 957, 1109, 1110, 1111, 1112, 1113, 1114, 1120, 1121, 1196], "represent": [1, 6, 97, 137, 206, 254, 299, 378, 420, 440, 451, 490, 493, 549, 616, 681, 748, 821, 926, 974, 1032, 1109, 1112, 1114, 1118, 1120, 1121, 1162, 1171], "univers": [1, 385, 391, 422, 440, 1110, 1119], "preflabel": [1, 219, 234, 479, 488, 508, 512, 515, 524, 544, 628, 991, 1015, 1109, 1119, 1196], "share": [1, 202, 264, 281, 289, 292, 295, 309, 335, 360, 368, 373, 472, 672, 744, 813, 917, 1029, 1098, 1108, 1109, 1111, 1117, 1121, 1170], "multipl": [1, 214, 215, 229, 385, 392, 397, 422, 427, 432, 440, 446, 451, 454, 460, 696, 740, 768, 774, 1052, 1070, 1085, 1109, 1110, 1111, 1119, 1121, 1123, 1132, 1151, 1166, 1167, 1170, 1180, 1183, 1186, 1196, 1197], "intent": [1, 1170, 1196], "languag": [1, 376, 383, 408, 414, 420, 440, 443, 616, 617, 1107, 1109, 1114, 1119, 1123, 1130, 1139, 1170, 1174, 1186, 1196], "unintent": 1, "version": [1, 2, 155, 165, 397, 440, 676, 698, 720, 732, 838, 845, 857, 885, 921, 1110, 1113, 1120, 1123, 1132, 1170, 1175, 1186], "freedom": 1, "littl": [1, 1132, 1143], "disallow": 1, "suit": [1, 1109, 1122], "qc": [1, 1135, 1185], "dashboard": 1, "aim": [1, 1103, 1110, 1196], "conveni": [1, 1105, 1109, 1111, 1170], "certain": [1, 1105, 1113, 1170], "ol": [1, 1105, 1109, 1116, 1131, 1139, 1140, 1155, 1168, 1170], "roughli": [1, 1120], "adher": [1, 1109, 1135], "welcom": [2, 1103, 1104, 1106, 1131], "tracker": [2, 1103, 1123], "bug": [2, 1104, 1122, 1148], "enhanc": [2, 1126], "tutori": [2, 1106, 1114, 1120, 1128, 1130, 1132, 1133, 1136, 1138, 1166, 1197], "resid": 2, "folder": [2, 1103, 1105, 1127, 1132, 1138, 1152, 1163], "build": [2, 265, 281, 287, 310, 335, 352, 1109, 1121, 1129, 1131, 1166, 1184], "live": [2, 479, 483, 491, 502, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 616, 1127], "diataxi": 2, "rst": 2, "md": [2, 1105], "docstr": [2, 1105], "read": [2, 1107, 1112, 1114, 1139], "architectur": [2, 1106, 1130, 1132, 1168], "best": [2, 1108, 1121, 1126, 1169, 1186], "practic": [2, 1108, 1110, 1116, 1118, 1119, 1121, 1170, 1196], "sooner": 2, "mark": [2, 1118, 1120], "draft": 2, "readi": [2, 1127, 1131], "review": [2, 1116, 1126], "sure": [2, 1129, 1132], "unit": [2, 265, 280, 281, 287, 310, 325, 334, 335, 352, 369, 1105], "print": [2, 1102, 1110, 1113, 1117, 1118, 1119, 1120, 1129, 1133, 1134, 1140, 1143, 1144, 1148, 1151, 1157, 1159, 1161, 1162, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1180, 1184, 1196], "ing": 2, "log": [2, 783, 784, 1121], "diagnost": [2, 1121], "captur": [2, 375, 440, 446, 1111, 1170], "see": [2, 203, 250, 745, 815, 1102, 1105, 1107, 1108, 1109, 1110, 1111, 1112, 1113, 1114, 1115, 1117, 1120, 1121, 1122, 1126, 1127, 1128, 1129, 1132, 1134, 1135, 1137, 1142, 1143, 1144, 1146, 1148, 1156, 1159, 1160, 1167, 1169, 1170, 1172, 1175, 1176, 1178, 1180, 1182, 1183, 1184, 1185, 1186, 1187, 1191, 1197], "exemplar": 2, "regist": [2, 421], "scheme": [2, 1129, 1157, 1164, 1166, 1168], "__init__": [2, 1159, 1160, 1165, 1167], "py": [2, 815, 1133, 1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "__post_init__": [2, 1129], "cli": [2, 1105, 1123, 1126, 1132, 1144, 1186, 1196], "refactor": 2, "substanti": 2, "ad": [2, 214, 229, 236, 1110, 1115, 1116, 1120, 1126, 1129, 1139, 1140, 1141], "diff": [2, 4, 42, 46, 56, 72, 91, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 204, 818, 831, 843, 845, 866, 882, 883, 885, 1109, 1130, 1172, 1174, 1178], "coordin": 2, "advanc": [2, 1105, 1109, 1110, 1115, 1120, 1131, 1138, 1154, 1170, 1184], "dev": [2, 1138], "environ": [2, 1112, 1126, 1132], "test_implement": 2, "test_util": 2, "author": 2, "makefil": 2, "set": [2, 3, 4, 17, 21, 22, 30, 36, 42, 45, 46, 66, 67, 78, 79, 82, 83, 87, 88, 120, 127, 215, 236, 240, 322, 335, 358, 362, 384, 391, 392, 396, 425, 426, 428, 435, 437, 438, 440, 446, 456, 463, 473, 474, 769, 778, 779, 783, 794, 795, 800, 805, 810, 845, 860, 885, 912, 944, 952, 956, 960, 964, 965, 1058, 1061, 1070, 1073, 1087, 1096, 1105, 1107, 1109, 1112, 1113, 1116, 1119, 1120, 1121, 1126, 1132, 1133, 1134, 1139, 1143, 1144, 1152, 1163, 1169, 1170, 1171, 1174, 1175, 1176, 1178, 1181, 1182, 1183, 1185, 1196], "vx": 2, "click": [2, 1144], "button": 2, "tweak": 2, "emphasi": 2, "titl": [2, 536, 616, 838, 885], "githu": 2, "clear": [2, 1110], "concis": [2, 1129], "changelog": 2, "goe": 2, "trigger": [2, 1163], "publish": [2, 479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 620, 1129], "fail": [2, 1162], "fix": [2, 1104, 1170, 1185], "delet": [2, 1108, 1118, 1140, 1170], "again": [2, 1132], "gener": [3, 4, 23, 30, 31, 36, 37, 42, 43, 46, 49, 53, 61, 66, 67, 68, 76, 77, 79, 80, 84, 86, 87, 88, 89, 92, 95, 117, 127, 214, 236, 249, 251, 281, 296, 322, 325, 335, 358, 359, 362, 375, 408, 440, 443, 446, 453, 475, 476, 478, 498, 720, 738, 831, 843, 845, 885, 892, 923, 944, 969, 1104, 1106, 1109, 1111, 1112, 1114, 1120, 1121, 1122, 1126, 1127, 1130, 1132, 1134, 1135, 1136, 1139, 1144, 1146, 1161, 1167, 1169, 1172, 1176, 1178, 1181, 1183, 1184, 1185, 1196, 1197], "oa": [3, 4, 17, 22, 23, 61, 86, 981, 991, 1023, 1169], "annot": [3, 31, 46, 204, 375, 376, 383, 384, 385, 387, 388, 391, 392, 397, 399, 406, 407, 408, 414, 420, 423, 427, 429, 430, 440, 446, 449, 467, 470, 477, 478, 484, 488, 510, 616, 641, 651, 827, 830, 841, 845, 885, 981, 991, 992, 993, 1001, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1018, 1021, 1022, 1023, 1024, 1025, 1028, 1064, 1102, 1106, 1109, 1110, 1112, 1114, 1118, 1121, 1123, 1129, 1130, 1140, 1152, 1155, 1168, 1169, 1170, 1171, 1174, 1175, 1177, 1196], "positiveornegativeassoci": [3, 4, 17, 21, 23, 30, 37, 41, 43, 46, 53, 61, 66, 67, 68, 76, 77, 79, 80, 84, 86, 87, 88, 89, 92], "uriorcuri": [3, 4, 17, 20, 21, 22, 23, 24, 30, 36, 43, 44, 46, 55, 56, 61, 62, 64, 66, 70, 72, 73, 74, 75, 76, 79, 84, 86, 87, 92, 95, 121, 127, 144, 165, 214, 219, 225, 229, 230, 234, 235, 236, 247, 249, 271, 278, 281, 288, 290, 321, 332, 335, 355, 363, 440, 479, 483, 491, 506, 512, 515, 517, 524, 525, 533, 536, 538, 543, 544, 545, 548, 599, 611, 616, 671, 675, 695, 696, 710, 714, 720, 746, 768, 769, 774, 783, 790, 794, 796, 806, 819, 820, 867, 885, 939, 942, 943, 944, 945, 955, 956, 967, 994, 1002, 1004, 1017, 1031, 1044, 1046, 1058, 1069, 1070], "predic": [3, 4, 17, 22, 23, 36, 38, 42, 46, 49, 51, 56, 66, 67, 72, 87, 88, 142, 155, 165, 167, 172, 173, 174, 175, 183, 190, 191, 193, 199, 201, 271, 281, 313, 318, 321, 335, 348, 356, 376, 383, 387, 389, 406, 408, 414, 415, 420, 424, 440, 453, 458, 482, 488, 554, 616, 828, 845, 860, 877, 879, 885, 891, 915, 939, 944, 956, 1038, 1046, 1063, 1070, 1102, 1103, 1105, 1109, 1110, 1111, 1113, 1116, 1117, 1120, 1121, 1122, 1127, 1131, 1134, 1138, 1148, 1159, 1166, 1169, 1170, 1171, 1176, 1179, 1181, 1182, 1196], "relationship": [3, 17, 22, 23, 41, 46, 76, 77, 142, 155, 165, 184, 214, 229, 264, 271, 278, 279, 281, 286, 288, 290, 291, 309, 321, 332, 333, 335, 351, 355, 363, 366, 387, 391, 440, 446, 449, 450, 451, 453, 465, 828, 939, 944, 955, 956, 957, 960, 1103, 1109, 1111, 1112, 1113, 1114, 1130, 1131, 1133, 1135, 1138, 1140, 1162, 1170, 1174, 1176, 1179, 1182], "ontologi": [3, 17, 22, 23, 24, 31, 41, 44, 46, 61, 68, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 204, 250, 264, 265, 271, 278, 279, 280, 281, 282, 283, 286, 287, 288, 289, 290, 291, 292, 309, 310, 321, 332, 333, 334, 335, 337, 338, 351, 352, 355, 360, 363, 366, 368, 375, 376, 383, 384, 385, 387, 388, 391, 392, 396, 397, 399, 406, 408, 414, 420, 421, 423, 427, 429, 430, 438, 439, 440, 444, 446, 451, 459, 467, 470, 471, 477, 478, 479, 483, 488, 491, 498, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 524, 525, 530, 533, 538, 543, 544, 545, 548, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 607, 609, 611, 612, 613, 614, 615, 620, 628, 630, 638, 643, 645, 649, 650, 658, 661, 663, 667, 668, 669, 670, 671, 675, 676, 698, 720, 731, 738, 745, 815, 816, 819, 830, 831, 842, 843, 845, 848, 850, 851, 852, 854, 855, 857, 858, 859, 860, 863, 864, 866, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 884, 885, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 901, 902, 905, 906, 908, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 942, 944, 945, 949, 955, 956, 957, 971, 1102, 1106, 1109, 1110, 1111, 1113, 1114, 1116, 1117, 1118, 1120, 1121, 1122, 1123, 1126, 1129, 1131, 1132, 1133, 1134, 1135, 1140, 1144, 1146, 1148, 1152, 1154, 1155, 1159, 1162, 1163, 1166, 1167, 1168, 1169, 1171, 1172, 1174, 1175, 1176, 1177, 1178, 1180, 1181, 1182, 1183, 1184, 1185, 1190], "property_valu": [3, 17, 22, 23, 46, 1183], "propertyvalu": [3, 17, 22, 46, 61, 76, 80, 375, 376, 383, 384, 385, 387, 388, 391, 392, 396, 397, 399, 406, 414, 415, 420, 440, 443, 446, 453, 475, 476, 478, 1111], "pair": [3, 17, 22, 42, 46, 80, 150, 155, 159, 164, 165, 182, 185, 200, 482, 616, 641, 651, 1058, 1070, 1087, 1096, 1103, 1109, 1116, 1120, 1121, 1126, 1169, 1170, 1177, 1181, 1182], "subject_label": [3, 17, 22, 41, 46, 768, 783, 981, 991, 1004, 1113, 1117, 1132, 1138, 1169], "label": [3, 17, 22, 41, 46, 68, 77, 89, 95, 122, 127, 155, 165, 170, 173, 175, 179, 181, 184, 188, 191, 193, 196, 199, 225, 313, 325, 335, 342, 361, 367, 391, 399, 413, 415, 440, 444, 479, 481, 483, 488, 491, 504, 506, 508, 510, 512, 515, 524, 529, 532, 533, 535, 538, 543, 544, 548, 568, 601, 603, 604, 609, 616, 665, 697, 698, 720, 729, 767, 768, 776, 783, 798, 808, 816, 885, 939, 942, 943, 945, 956, 1102, 1107, 1109, 1110, 1112, 1113, 1114, 1118, 1120, 1126, 1127, 1130, 1132, 1133, 1134, 1138, 1140, 1143, 1144, 1145, 1146, 1147, 1148, 1149, 1151, 1157, 1162, 1163, 1169, 1170, 1171, 1174, 1176, 1178, 1180, 1184, 1197], "predicate_label": [3, 17, 22, 41, 46, 1113, 1138], "negat": [3, 17, 21, 22, 30, 37, 43, 46, 61, 66, 67, 68, 76, 77, 78, 79, 80, 84, 86, 87, 88, 89, 92, 1111], "evid": [3, 17, 22, 43, 46, 488, 616, 1109, 1111], "supporting_object": [3, 17, 22, 46], "aggregator_knowledge_sourc": [3, 4, 17, 21, 22, 46, 1186], "subject_closur": [3, 17, 22, 46], "via": [3, 17, 22, 46, 66, 67, 87, 88, 1102, 1105, 1108, 1109, 1111, 1112, 1116, 1117, 1119, 1120, 1123, 1132, 1138, 1139, 1158, 1166, 1169, 1177, 1180, 1196], "th": [3, 4, 17, 22, 42, 46, 384, 438, 440, 446, 456, 992, 1004], "subject_closure_label": [3, 17, 22, 46], "object_closur": [3, 17, 22, 46], "object_closure_label": [3, 17, 22, 46], "rollupgroup": [3, 32, 44, 46, 85], "pairwisecoassoci": [3, 33, 46, 57, 58, 59, 60, 62, 63, 64, 65, 81, 90, 1169], "associations_for_subjects_in_common": [3, 20, 46], "self": [3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 96, 155, 159, 214, 215, 219, 225, 251, 252, 264, 265, 266, 267, 271, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 512, 515, 524, 525, 529, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 680, 695, 696, 698, 699, 746, 764, 767, 768, 769, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 939, 942, 943, 944, 945, 981, 991, 992, 993, 994, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1058, 1061, 1062, 1063, 1171, 1176], "ontoassoc": [3, 4, 17, 20, 21, 22, 23, 24, 32, 33, 34, 35, 36, 38, 39, 40, 41, 42, 43, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 62, 63, 64, 65, 66, 67, 69, 70, 71, 72, 78, 80, 81, 82, 83, 85, 87, 88, 90, 91, 92], "from_schema": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 328, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 400, 405, 406, 407, 408, 409, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 498, 500, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 521, 522, 523, 524, 525, 529, 530, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 679, 680, 688, 695, 696, 697, 698, 699, 701, 707, 708, 709, 710, 711, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 764, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 925, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 996, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1054, 1058, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100], "slot_usag": [3, 17, 383, 397, 414, 420, 479, 488, 491, 512, 535, 536, 538, 1051, 1062], "domain_of": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 36, 37, 43, 44, 45, 47, 48, 49, 50, 51, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 155, 159, 163, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 214, 215, 219, 225, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 264, 265, 266, 267, 271, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 482, 483, 488, 491, 492, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 524, 525, 530, 533, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 562, 563, 564, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 576, 578, 579, 580, 581, 582, 583, 585, 586, 587, 588, 589, 590, 591, 592, 594, 595, 596, 597, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 630, 638, 639, 640, 641, 647, 648, 649, 650, 651, 652, 655, 658, 660, 661, 662, 663, 664, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 680, 695, 696, 698, 699, 707, 708, 709, 710, 711, 712, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 802, 803, 804, 805, 806, 807, 808, 809, 810, 816, 818, 819, 820, 828, 831, 838, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 866, 867, 868, 869, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 882, 883, 884, 886, 888, 889, 890, 891, 892, 893, 895, 896, 897, 898, 899, 900, 901, 902, 904, 905, 906, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1058, 1061, 1062, 1063, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100], "equals_express": [3, 17, 506, 529, 535, 768, 802, 827, 830, 841, 845, 852], "class_uri": [3, 214, 219, 225, 251, 252, 296, 297, 375, 388, 389, 391, 399, 405, 413, 415, 479, 483, 487, 488, 491, 512, 515, 524, 533, 536, 538, 540, 543, 545, 816, 819, 838, 944, 945, 991, 1062, 1063], "induc": [3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 96, 155, 159, 214, 215, 219, 225, 251, 252, 264, 265, 266, 267, 271, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 512, 515, 524, 525, 529, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 680, 695, 696, 698, 699, 746, 764, 767, 768, 769, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 939, 942, 943, 944, 945, 981, 991, 992, 993, 994, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1058, 1061, 1062, 1063], "ontolog": [3, 4, 17, 22, 23, 61, 86, 1109, 1117], "descriptor": [3, 4, 17, 22, 23, 31, 46, 61, 86, 1109, 1112, 1169, 1186], "exact_map": [3, 4, 17, 22, 23, 61, 73, 74, 75, 86, 150, 376, 408, 414, 420, 478, 479, 483, 488, 491, 506, 508, 510, 511, 512, 515, 524, 533, 536, 538, 543, 544, 548, 553, 554, 555, 556, 578, 592, 596, 608, 628, 629, 663, 668, 943, 981, 991, 1014, 1015, 1021, 1022, 1023, 1024, 1038, 1054, 1063, 1072], "hasbodi": [3, 4, 17, 22, 86, 981, 991, 1023], "1000": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 313, 314, 318, 319, 321, 325, 326, 328, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 400, 405, 406, 407, 408, 409, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 483, 488, 491, 492, 498, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 521, 522, 523, 524, 525, 530, 533, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 679, 680, 688, 695, 696, 697, 698, 699, 701, 707, 708, 709, 710, 711, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 820, 828, 831, 838, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 925, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 996, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1054, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1184], "owner": [3, 4, 17, 20, 21, 22, 23, 24, 45, 78, 94, 95, 96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 155, 159, 163, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 214, 215, 219, 225, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 264, 265, 266, 267, 271, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 425, 426, 428, 437, 447, 455, 463, 473, 474, 479, 482, 483, 488, 491, 492, 505, 506, 507, 508, 509, 510, 511, 512, 515, 524, 525, 533, 536, 538, 539, 540, 543, 544, 545, 548, 680, 695, 696, 698, 699, 707, 708, 709, 710, 711, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 767, 768, 769, 782, 787, 788, 789, 790, 791, 792, 793, 804, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 866, 867, 868, 869, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 886, 888, 889, 890, 891, 892, 893, 895, 896, 897, 898, 899, 900, 901, 902, 904, 905, 906, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1058, 1061, 1062, 1063, 1065, 1066, 1067, 1068, 1069, 1073, 1074, 1075, 1077, 1078, 1081, 1082, 1083, 1084, 1086, 1090, 1091, 1092, 1093, 1094, 1095, 1097, 1099, 1100], "associationchang": [3, 17, 21, 22, 30, 34, 36, 42, 46, 47, 48, 49, 50, 51, 54, 55, 56, 69, 70, 71, 72, 79, 82, 83, 84, 86, 91], "slot_group": [3, 4, 17, 22, 23, 61, 76, 86, 827, 830, 841, 845, 850, 851, 852, 858, 859, 860, 863, 864, 871, 872, 873, 875, 876, 877, 879, 880, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 902, 906, 908, 911, 914, 915, 918], "core_tripl": [3, 4, 17, 22, 23, 46, 61, 76, 86], "hastarget": [3, 17, 22, 23, 61], "mixin": [3, 4, 17, 22, 46, 47, 48, 49, 50, 51, 54, 55, 56, 68, 69, 70, 71, 72, 77, 82, 83, 89, 155, 168, 169, 170, 172, 173, 177, 178, 179, 183, 187, 188, 190, 191, 195, 196, 201, 491, 513, 514, 530, 533, 544, 548, 553, 587, 588, 589, 601, 603, 604, 609, 616, 632, 657, 991], "denormalized_slot": [3, 17, 22, 46, 68, 77, 89], "parserconfigur": [3, 4, 17, 22, 30, 45, 46, 78, 79], "inherit": [4, 19, 20, 21, 23, 24, 94, 95, 96, 109, 153, 155, 159, 214, 215, 219, 222, 225, 252, 264, 265, 270, 271, 297, 309, 310, 313, 314, 317, 318, 319, 321, 322, 325, 326, 387, 389, 391, 392, 397, 399, 402, 405, 413, 415, 482, 487, 488, 529, 534, 535, 680, 694, 695, 696, 698, 699, 746, 763, 767, 816, 818, 819, 820, 828, 837, 838, 842, 938, 944, 981, 987, 992, 993, 994, 1048, 1049, 1058, 1061, 1110], "summary_group": [4, 46], "publication_is_ad": [4, 42, 46], "wa": [4, 39, 40, 42, 46, 49, 51, 52, 82, 479, 483, 491, 502, 506, 509, 512, 515, 524, 533, 538, 543, 544, 548, 575, 599, 616, 698, 720, 730, 741, 820, 842, 885, 898, 922, 1105, 1112, 1118], "prese": [4, 42, 46], "publication_is_delet": [4, 42, 46], "presen": [4, 42, 46], "old_pred": [4, 42, 46, 76], "new_pred": [4, 42, 46, 76], "old_object": [4, 42, 46, 61], "new_object": [4, 42, 46, 61], "old_object_obsolet": [4, 42, 46], "is_migr": [4, 42, 46], "is_gener": [4, 42, 46], "is_speci": [4, 42, 46], "is_creat": [4, 42, 46], "is_delet": [4, 42, 46], "closure_pred": [4, 46], "sp": [4, 46, 1064], "closure_delta": [4, 46], "integ": [4, 20, 34, 46, 57, 58, 59, 60, 95, 110, 118, 119, 124, 127, 132, 134, 135, 154, 165, 219, 236, 245, 281, 335, 440, 616, 634, 636, 637, 696, 698, 699, 720, 725, 735, 736, 756, 783, 818, 827, 828, 830, 841, 845, 850, 851, 852, 858, 861, 862, 863, 864, 870, 871, 872, 873, 876, 880, 881, 885, 886, 889, 893, 895, 896, 897, 899, 901, 902, 906, 908, 911, 912, 914, 918, 919, 956, 988, 992, 1004, 1007, 1038, 1061, 1068, 1070, 1073, 1075], "diff_slot": [4, 40, 46, 47, 48, 49, 50, 51, 54, 55, 56, 61, 69, 70, 71, 72, 76, 82, 83], "been": [4, 50, 71, 1111, 1117, 1118, 1134, 1135, 1159], "obsolet": [4, 50, 71, 479, 483, 488, 491, 506, 509, 512, 515, 524, 529, 533, 535, 538, 543, 544, 548, 570, 571, 581, 616, 845, 872, 873, 885, 893, 896, 897, 1114, 1130, 1139, 1170, 1174, 1178], "migrat": [4, 49, 50, 51, 1139], "binari": [5, 46, 93, 127, 136, 165, 205, 236, 253, 281, 298, 335, 377, 440, 489, 616, 678, 720, 747, 783, 817, 885, 924, 956, 973, 1004, 1030, 1070], "xsd": [5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 25, 26, 27, 28, 29, 46, 93, 97, 98, 100, 101, 102, 103, 104, 105, 106, 107, 110, 112, 113, 114, 115, 116, 127, 136, 137, 138, 140, 141, 143, 145, 146, 147, 148, 149, 151, 156, 157, 158, 160, 161, 162, 165, 205, 206, 207, 209, 210, 211, 212, 213, 217, 218, 220, 223, 224, 226, 227, 228, 236, 253, 254, 255, 257, 258, 259, 260, 261, 262, 263, 268, 272, 273, 274, 276, 277, 281, 298, 299, 300, 302, 303, 304, 305, 306, 307, 308, 315, 320, 323, 324, 327, 329, 330, 335, 377, 378, 379, 381, 382, 386, 390, 393, 394, 395, 398, 403, 411, 412, 416, 417, 418, 419, 421, 440, 462, 489, 490, 493, 494, 496, 497, 499, 501, 516, 517, 518, 519, 520, 526, 527, 541, 542, 546, 547, 549, 550, 551, 616, 678, 681, 682, 684, 685, 686, 687, 689, 690, 691, 692, 700, 702, 703, 704, 705, 706, 715, 716, 717, 718, 720, 724, 747, 748, 749, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 762, 765, 766, 770, 771, 772, 773, 783, 817, 821, 822, 824, 825, 826, 827, 829, 830, 832, 833, 834, 835, 839, 840, 841, 844, 846, 847, 861, 862, 881, 885, 924, 926, 927, 929, 930, 931, 932, 933, 934, 935, 936, 940, 941, 946, 947, 948, 956, 973, 974, 975, 977, 978, 979, 980, 982, 983, 984, 985, 988, 989, 990, 995, 997, 998, 1004, 1030, 1032, 1033, 1035, 1036, 1037, 1039, 1040, 1041, 1042, 1045, 1055, 1056, 1057, 1059, 1060, 1070, 1119, 1196], "bool": [5, 93, 136, 205, 253, 298, 377, 489, 678, 747, 817, 924, 973, 1030, 1145, 1147, 1148, 1149, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1197], "repr": [5, 6, 7, 8, 9, 14, 15, 16, 18, 19, 25, 27, 28, 29, 93, 97, 98, 99, 100, 105, 106, 107, 108, 109, 112, 114, 115, 116, 136, 137, 138, 139, 140, 144, 147, 148, 151, 152, 153, 157, 160, 161, 162, 205, 206, 207, 208, 209, 217, 218, 220, 221, 222, 223, 226, 227, 228, 253, 254, 255, 256, 257, 262, 263, 268, 269, 270, 272, 274, 276, 277, 298, 299, 300, 301, 302, 307, 308, 315, 316, 317, 323, 327, 329, 330, 377, 378, 379, 380, 381, 394, 395, 398, 401, 402, 411, 417, 418, 419, 489, 493, 494, 495, 496, 517, 518, 519, 527, 528, 534, 541, 547, 550, 551, 678, 681, 682, 683, 684, 690, 691, 692, 693, 694, 702, 704, 705, 706, 747, 748, 749, 750, 751, 757, 758, 759, 761, 763, 765, 770, 771, 772, 817, 821, 822, 823, 824, 833, 834, 835, 836, 837, 839, 844, 846, 847, 924, 926, 927, 928, 929, 934, 935, 936, 937, 938, 940, 946, 947, 948, 973, 974, 975, 976, 977, 983, 984, 985, 986, 987, 989, 995, 997, 998, 1030, 1032, 1033, 1034, 1035, 1041, 1042, 1045, 1047, 1048, 1055, 1057, 1059, 1060], "compact": [6, 46, 97, 127, 137, 165, 206, 236, 254, 281, 299, 335, 378, 440, 493, 616, 681, 720, 748, 783, 821, 885, 926, 956, 974, 1004, 1032, 1070, 1109, 1116, 1120, 1132], "str": [6, 7, 8, 9, 14, 15, 16, 18, 19, 25, 26, 27, 28, 29, 97, 98, 99, 100, 105, 106, 107, 108, 109, 112, 113, 114, 115, 116, 137, 138, 139, 140, 144, 147, 148, 149, 151, 152, 153, 156, 157, 158, 160, 161, 162, 206, 207, 208, 209, 217, 218, 220, 221, 222, 223, 224, 226, 227, 228, 254, 255, 256, 257, 262, 263, 268, 269, 270, 272, 273, 274, 276, 277, 299, 300, 301, 302, 307, 308, 315, 316, 317, 320, 323, 324, 327, 329, 330, 378, 379, 380, 381, 394, 395, 398, 401, 402, 403, 411, 412, 416, 417, 418, 419, 421, 490, 493, 494, 495, 496, 517, 518, 519, 520, 526, 527, 528, 534, 541, 542, 546, 547, 549, 550, 551, 681, 682, 683, 684, 690, 691, 692, 693, 694, 700, 702, 703, 704, 705, 706, 748, 749, 750, 751, 757, 758, 759, 761, 763, 765, 766, 770, 771, 772, 821, 822, 823, 824, 833, 834, 835, 836, 837, 839, 840, 844, 846, 847, 926, 927, 928, 929, 934, 935, 936, 937, 938, 940, 941, 946, 947, 948, 974, 975, 976, 977, 983, 984, 985, 986, 987, 989, 990, 995, 997, 998, 1032, 1033, 1034, 1035, 1041, 1042, 1045, 1047, 1048, 1055, 1056, 1057, 1059, 1060, 1133, 1145, 1147, 1148, 1149, 1157, 1158, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1186, 1197], "year": [7, 46, 98, 127, 138, 165, 207, 236, 255, 281, 300, 335, 379, 440, 494, 616, 682, 720, 749, 783, 822, 885, 927, 956, 975, 1004, 1033, 1070], "month": [7, 46, 98, 127, 138, 165, 207, 236, 255, 281, 300, 335, 379, 440, 494, 616, 682, 720, 749, 783, 822, 885, 927, 956, 975, 1004, 1033, 1070], "ideal": [7, 46, 98, 127, 138, 165, 207, 236, 255, 281, 300, 335, 379, 440, 494, 616, 682, 720, 749, 783, 822, 885, 927, 956, 975, 1004, 1033, 1070], "calendar": [7, 46, 98, 127, 138, 165, 207, 236, 255, 281, 300, 335, 379, 440, 494, 616, 682, 720, 749, 783, 822, 885, 927, 956, 975, 1004, 1033, 1070], "xsddate": [7, 98, 138, 207, 255, 300, 379, 494, 682, 749, 822, 927, 975, 1033], "datetim": [8, 46, 99, 127, 139, 165, 208, 236, 256, 281, 301, 335, 380, 440, 495, 616, 683, 720, 750, 783, 823, 842, 878, 885, 910, 928, 956, 976, 1004, 1034, 1070], "xsddatetim": [9, 100, 140, 209, 257, 302, 381, 496, 684, 751, 824, 929, 977, 1035], "real": [10, 11, 12, 46, 101, 102, 103, 127, 141, 143, 145, 165, 210, 211, 212, 236, 258, 259, 260, 281, 303, 304, 305, 335, 382, 386, 390, 440, 497, 499, 501, 616, 685, 686, 687, 720, 752, 753, 754, 783, 825, 826, 829, 885, 930, 931, 932, 956, 978, 979, 980, 1004, 1036, 1037, 1039, 1070], "precis": [10, 46, 101, 127, 141, 165, 210, 236, 258, 281, 303, 335, 382, 440, 497, 616, 685, 720, 752, 783, 825, 885, 930, 956, 978, 1004, 1036, 1070, 1110, 1120, 1126], "float": [11, 20, 35, 46, 81, 94, 95, 102, 125, 126, 127, 128, 129, 130, 131, 143, 165, 211, 236, 259, 281, 304, 314, 318, 335, 344, 374, 386, 440, 499, 616, 686, 720, 746, 753, 760, 762, 768, 769, 773, 778, 779, 780, 783, 826, 885, 931, 956, 979, 991, 1001, 1004, 1037, 1043, 1066, 1070, 1166, 1169, 1176, 1181], "int": [13, 104, 110, 146, 154, 213, 261, 306, 393, 516, 689, 755, 756, 832, 933, 982, 988, 1040, 1161, 1166, 1169, 1176, 1183, 1186], "path": [14, 25, 46, 105, 112, 127, 147, 155, 157, 165, 190, 217, 223, 236, 262, 272, 281, 307, 323, 335, 394, 411, 440, 518, 541, 616, 690, 695, 702, 714, 720, 739, 743, 757, 765, 783, 833, 839, 885, 934, 940, 956, 983, 989, 1004, 1041, 1055, 1070, 1109, 1120, 1129, 1132, 1138, 1157, 1162, 1163, 1164, 1166, 1170, 1173, 1174, 1176, 1186], "derefer": [14, 15, 25, 105, 106, 112, 147, 148, 157, 217, 218, 223, 262, 263, 272, 307, 308, 323, 394, 395, 411, 518, 519, 541, 690, 691, 702, 757, 758, 765, 833, 834, 839, 934, 935, 940, 983, 984, 989, 1041, 1042, 1055], "zero": [14, 25, 105, 112, 147, 157, 217, 223, 262, 272, 307, 323, 394, 411, 518, 541, 690, 702, 757, 765, 833, 839, 934, 940, 983, 989, 1041, 1055, 1113, 1120, 1170], "valid": [14, 15, 25, 105, 106, 112, 147, 148, 157, 204, 217, 218, 223, 262, 263, 272, 307, 308, 323, 385, 394, 395, 405, 411, 455, 518, 519, 541, 690, 691, 702, 757, 758, 765, 833, 834, 839, 934, 935, 940, 983, 984, 989, 1038, 1041, 1042, 1043, 1049, 1055, 1058, 1061, 1062, 1063, 1065, 1066, 1067, 1068, 1071, 1072, 1073, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1101, 1102, 1105, 1123, 1129, 1130, 1131, 1155, 1168, 1174, 1177, 1179], "tree": [14, 15, 105, 106, 147, 148, 217, 218, 262, 263, 307, 308, 394, 395, 518, 519, 690, 691, 757, 758, 833, 834, 934, 935, 983, 984, 1041, 1042, 1103, 1105, 1131, 1135], "pointer": [15, 46, 106, 127, 148, 165, 218, 236, 263, 281, 308, 335, 395, 440, 519, 616, 691, 720, 758, 783, 834, 885, 935, 956, 984, 1004, 1042, 1070], "prefix": [16, 46, 107, 127, 151, 165, 220, 236, 268, 281, 315, 322, 325, 326, 335, 391, 392, 398, 405, 438, 440, 446, 447, 527, 616, 692, 720, 759, 783, 835, 838, 845, 885, 890, 892, 936, 956, 985, 1004, 1045, 1070, 1109, 1114, 1118, 1119, 1121, 1126, 1148, 1169, 1170, 1175, 1183, 1186, 1197], "curi": [16, 18, 19, 29, 46, 107, 108, 109, 116, 127, 151, 152, 153, 162, 165, 219, 220, 221, 222, 225, 228, 232, 236, 268, 269, 270, 277, 281, 315, 316, 317, 330, 335, 391, 392, 398, 401, 402, 403, 419, 421, 440, 456, 490, 527, 528, 534, 549, 551, 616, 692, 693, 694, 698, 706, 720, 728, 759, 761, 763, 772, 783, 835, 836, 837, 847, 885, 936, 937, 938, 939, 942, 943, 945, 948, 955, 956, 985, 986, 987, 998, 1004, 1045, 1047, 1048, 1060, 1070, 1107, 1109, 1110, 1111, 1112, 1114, 1117, 1120, 1122, 1130, 1132, 1133, 1139, 1140, 1144, 1145, 1148, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "bnode": [18, 46, 108, 127, 152, 165, 221, 236, 269, 281, 316, 335, 401, 440, 528, 616, 693, 720, 761, 783, 836, 885, 937, 956, 986, 1004, 1047, 1070], "shex": [18, 19, 108, 109, 152, 153, 221, 222, 269, 270, 316, 317, 401, 402, 528, 534, 693, 694, 761, 763, 836, 837, 937, 938, 986, 987, 1047, 1048], "nonliter": [18, 108, 152, 221, 269, 316, 401, 528, 693, 761, 836, 937, 986, 1047], "iri": [19, 109, 153, 222, 270, 317, 391, 392, 402, 456, 513, 514, 517, 524, 525, 530, 534, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 628, 638, 649, 650, 658, 661, 667, 668, 669, 671, 694, 698, 720, 732, 763, 837, 938, 987, 1048, 1109, 1113, 1177], "elementidentifi": [19, 109, 153, 222, 270, 317, 402, 534, 694, 763, 837, 938, 987, 1048], "object1": [20, 46, 61, 1169], "object2": [20, 46, 61, 1169], "object1_label": [20, 46], "object2_label": [20, 46], "number_subjects_in_common": [20, 46, 1169], "proportion_subjects_in_common": [20, 46], "number_subjects_in_union": [20, 46], "number_subject_unique_to_entity1": [20, 46], "number_subject_unique_to_entity2": [20, 46], "subjects_in_common": [20, 46], "preserve_negated_associ": [21, 46], "parser": [21, 45, 46, 78, 1108], "include_association_attribut": [21, 46], "attr": [21, 46], "resourc": [21, 144, 399, 830, 831, 838, 849, 866, 874, 884, 885, 900, 904, 916, 920, 921, 923, 1038, 1070, 1109, 1113, 1115, 1117, 1122, 1129, 1139, 1148, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1186], "remov": [21, 78, 275, 328, 996, 1139, 1171, 1178, 1182], "defens": [21, 78], "slower": [21, 45], "instanti": [22, 251, 296, 375, 384, 408, 440, 485, 538, 544, 545, 764, 843, 945, 1038, 1046, 1052, 1053, 1063, 1070, 1109, 1143, 1161, 1170, 1186], "negatedassoci": [22, 23, 30, 37, 43, 46, 53, 61, 66, 67, 68, 76, 77, 79, 80, 84, 86, 87, 88, 89, 92], "tag": [23, 46, 61, 76, 214, 236, 242, 389, 396, 827, 830, 841, 845, 850, 852, 858, 859, 860, 863, 864, 865, 871, 872, 873, 876, 877, 879, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 901, 902, 907, 914, 915, 918, 1064, 1110, 1111, 1112, 1117, 1118, 1119, 1170, 1196], "group_object": [24, 46], "ancestor": [24, 44, 46, 768, 774, 776, 783, 1102, 1103, 1105, 1109, 1114, 1121, 1131, 1135, 1136, 1159, 1174, 1176, 1181], "sub_group": [24, 46], "rollup": [24, 46, 85, 1169], "nassoci": [24, 44], "inlined_as_list": [24, 32, 85, 266, 285, 311, 350, 391, 392, 431, 434, 438, 445, 449, 831, 843, 845, 849, 866, 900, 944, 972, 1051, 1052, 1062, 1085], "charact": [26, 46, 113, 127, 158, 165, 224, 236, 273, 275, 281, 324, 328, 335, 412, 440, 542, 616, 703, 720, 766, 783, 840, 885, 941, 956, 990, 996, 1004, 1056, 1070], "independ": [27, 46, 114, 127, 160, 165, 226, 236, 274, 275, 281, 327, 328, 335, 417, 440, 547, 616, 704, 720, 770, 783, 844, 885, 946, 956, 995, 996, 1004, 1057, 1070, 1120], "xsdtime": [27, 114, 160, 226, 274, 327, 417, 547, 704, 770, 844, 946, 995, 1057], "anyuri": [28, 29, 115, 116, 161, 162, 227, 228, 276, 277, 329, 330, 418, 419, 517, 550, 551, 705, 706, 771, 772, 846, 847, 947, 948, 997, 998, 1059, 1060], "liter": [28, 115, 161, 227, 276, 329, 418, 550, 705, 771, 846, 947, 997, 1059, 1109, 1110, 1119, 1127, 1170, 1196], "w3": [31, 46, 154, 1004, 1027, 1113, 1169, 1170], "bioscienc": [31, 46], "aspect": [31, 46, 1111, 1116, 1121, 1139, 1190], "drug": [31, 46], "chemic": [31, 46, 1120], "none": [38, 41, 42, 46, 63, 65, 90, 111, 142, 150, 154, 166, 171, 174, 175, 180, 189, 192, 197, 236, 275, 281, 328, 335, 404, 410, 426, 428, 437, 440, 473, 616, 633, 679, 688, 697, 701, 720, 783, 827, 830, 841, 925, 996, 1004, 1054, 1064, 1070, 1110, 1113, 1118, 1119, 1120, 1132, 1133, 1138, 1140, 1145, 1147, 1148, 1149, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1186, 1197], "is_grouping_slot": [38, 865, 887, 894, 903, 907], "last": [40, 46, 52, 275, 328, 996], "modification_d": [40, 46], "creation_d": [40, 46, 479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 616, 653], "domain": [41, 42, 166, 167, 175, 181, 184, 193, 198, 199, 385, 391, 433, 440, 479, 483, 491, 506, 512, 515, 524, 529, 533, 535, 538, 543, 544, 548, 566, 581, 599, 606, 616, 631, 633, 668, 1102, 1109, 1111, 1120, 1139], "pertain": [42, 46], "_an": 44, "_": [44, 155, 405, 1103, 1109, 1112, 1120, 1122, 1148, 1162, 1196], "closure_information_content_delta": 46, "original_object": 46, "normal": [46, 73, 74, 75, 264, 281, 282, 289, 292, 309, 313, 335, 337, 360, 367, 368, 820, 885, 898, 1118, 1126, 1129, 1138, 1154, 1161, 1162, 1165, 1166, 1169, 1170, 1171, 1174, 1175, 1186], "original_pred": 46, "original_subject": 46, "inform": [46, 440, 745, 783, 815, 1070, 1109, 1110, 1111, 1112, 1114, 1115, 1118, 1120, 1129, 1133, 1134, 1136, 1140, 1146, 1167, 1170, 1172, 1181, 1186, 1196], "dateordatetim": [46, 127, 165, 236, 281, 335, 440, 616, 720, 783, 885, 956, 1004, 1070], "decim": [46, 127, 165, 236, 281, 335, 440, 616, 720, 783, 885, 956, 1004, 1070], "doubl": [46, 127, 165, 236, 281, 335, 440, 616, 720, 783, 885, 956, 1004, 1070], "jsonpath": [46, 127, 165, 236, 281, 335, 440, 616, 720, 783, 885, 956, 1004, 1070], "jsonpoint": [46, 127, 165, 236, 281, 335, 440, 616, 720, 783, 885, 956, 1004, 1070], "ncname": [46, 127, 165, 236, 281, 335, 405, 440, 455, 616, 720, 783, 885, 956, 1004, 1070], "nodeidentifi": [46, 127, 165, 236, 281, 335, 440, 616, 720, 783, 885, 956, 1004, 1070], "objectidentifi": [46, 127, 165, 236, 281, 335, 440, 616, 720, 783, 885, 956, 1004, 1070], "sparqlpath": [46, 127, 165, 236, 281, 335, 440, 616, 720, 783, 885, 956, 1004, 1070], "ye": [53, 453, 475, 478, 558, 562, 574, 578, 591, 611, 628, 630, 638, 664, 670, 675, 676, 1085, 1103, 1105], "enrich": [93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 1102, 1126, 1134, 1155, 1168, 1174], "search": [94, 127, 130, 204, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 992, 1000, 1003, 1004, 1007, 1010, 1011, 1020, 1028, 1103, 1106, 1112, 1114, 1121, 1126, 1130, 1131, 1138, 1140, 1143, 1151, 1155, 1159, 1163, 1168, 1169, 1170, 1174], "ontoenrich": [94, 95, 96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 129, 130, 131, 132, 133, 134, 135], "p_value_cutoff": [94, 127], "class_id": [95, 127, 1171], "class_label": [95, 127, 1171], "p_valu": [95, 111, 127, 1171], "p_value_adjust": [95, 127, 1171], "adjust": [95, 127, 129, 1171], "false_discovery_r": [95, 127], "discoveri": [95, 125, 127], "rate": [95, 125, 127], "fold_enrich": [95, 127], "fold": [95, 126, 127], "probabl": [95, 127, 783, 784, 1109, 1121, 1181], "estim": [95, 127, 131], "approach": [95, 127, 131, 1102, 1114, 1134, 1144, 1169], "sample_count": [95, 127, 1171], "sample_tot": [95, 127], "background_count": [95, 127, 1171], "count": [95, 118, 127, 818, 828, 882, 883, 885, 1132, 1172, 1176], "background_tot": [95, 127], "ancestor_of_more_informative_result": [95, 127], "previous": [95, 117, 123, 127, 1118, 1132, 1134], "descendant_of_more_informative_result": [95, 127], "classenrichmentresultset": [95, 127, 133], "0000175": [95, 128], "minimum_valu": [95, 131, 1064], "maximum_valu": [95, 131, 1064], "enrichemt": [96, 127, 133], "classenrichmentresult": [96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 131, 132, 133, 134, 135, 1171], "typeof": [110, 144, 149, 156, 214, 229, 320, 403, 416, 421, 490, 517, 520, 526, 546, 549, 700, 756, 760, 762, 773, 988], "sort": [111, 127, 1110, 1118, 1120, 1151, 1170, 1171, 1176, 1180], "permissible_valu": [111, 142, 150, 216, 275, 328, 400, 407, 409, 498, 679, 688, 697, 701, 925, 996, 1054, 1064], "classenrichmentconfigur": [127, 130], "sortfieldenum": 127, "posit": [127, 219, 236, 318, 335, 374, 981, 991, 1004, 1021, 1024, 1132, 1170], "side": [142, 155, 165, 175, 181, 184, 193, 199, 1116, 1171], "morespecificpredicateonright": 142, "lessspecificpredicateonright": 142, "less": [142, 1064, 1109, 1110, 1132, 1164, 1171, 1186, 1196], "leftentailedbyright": 142, "rightentailedbyleft": 142, "indirectformofedgeonright": 142, "ent": 142, "rightnodesareident": 142, "nonentailedrelationship": 142, "norelationship": 142, "missingmap": 142, "missingsubjectmap": 142, "missingobjectmap": 142, "lack": [142, 155, 163, 165, 214, 230, 485, 616, 1107, 1110], "5": [142, 318, 374, 391, 399, 403, 413, 415, 416, 421, 439, 1116, 1119, 1126, 1130, 1131, 1184], "neither": [142, 506, 1170], "nor": [142, 506, 1170], "20": 142, "99": 142, "readabl": [149, 165, 167, 391, 399, 413, 415, 440, 444, 520, 526, 616, 697, 939, 942, 943, 945, 956, 957, 1109, 1120, 1196], "n": [150, 155, 1133], "subject_mapping_cardin": [150, 155, 165], "object_mapping_cardin": [150, 155, 165], "mapping_cardinality_enum": 150, "www": [154, 1004, 1027, 1109, 1113, 1159, 1170, 1196], "2001": 154, "xmlschema": 154, "cross_ontology_diff": 154, "__": [155, 232, 375, 958, 959, 962], "categor": [155, 165, 214, 230, 236], "left_object": [155, 165], "right_object": [155, 165], "right_": 155, "predicate_": 155, "left_subject": [155, 165], "right_subject": [155, 165], "figur": [155, 165, 1120], "classif": [155, 165, 1116, 1120], "xodiff": [155, 159, 163, 166, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 200, 201], "diffcategori": [155, 163, 165], "left_subject_id": [155, 165, 175, 184, 199, 201], "entityrefer": [155, 165, 168, 172, 175, 177, 181, 183, 184, 186, 187, 190, 193, 195, 199, 201], "child": [155, 165, 167, 175, 177, 179, 180, 193, 195, 196, 197, 199, 387, 465, 1170, 1179], "left_object_id": [155, 165, 175, 181, 183, 184, 199], "left_predicate_id": [155, 165, 175, 184], "left_subject_label": [155, 165, 167, 175, 199], "left_object_label": [155, 165, 167, 175, 181], "left_predicate_label": [155, 165, 167, 175, 184], "right_subject_id": [155, 165, 184, 193, 199, 201], "matchabl": [155, 165, 167, 181, 187, 188, 189, 193, 195, 196, 197, 199], "right_object_id": [155, 165, 181, 183, 184, 193, 199], "right_predicate_id": [155, 165, 167, 184, 191, 192, 193], "right_subject_label": [155, 165, 167, 193, 199], "right_object_label": [155, 165, 167, 181, 193], "right_predicate_label": [155, 165, 167, 184, 193], "left_subject_is_funct": [155, 165, 166, 175], "ontol": [155, 165, 166, 175], "left_object_is_funct": [155, 165, 166, 175], "subject_mapping_pred": [155, 165, 184, 199], "hold": [155, 165, 183, 184, 199, 201, 944, 949, 954, 956, 1119, 1122, 1170, 1196], "object_mapping_pred": [155, 165, 184, 199], "right_intermediate_id": [155, 165], "mappingcardinalityenum": [155, 165, 182, 200], "structurediffresultset": [155, 165, 176, 185, 194], "nanoth": 155, "nontologi": 155, "nfor": 155, "nif": 155, "nthe": 155, "ni": 155, "nleft_object": 155, "nleft_subject": 155, "left_sid": [155, 165, 168, 169, 170, 172, 173, 177, 178, 179, 198], "right_sid": [155, 165, 187, 188, 190, 191, 195, 196, 198], "otherrelationship": [155, 190], "is_funct": [155, 165, 169, 178], "act": [156, 165, 701, 842, 848, 885, 1126], "relationaldiff": [159, 163, 165, 168, 169, 170, 172, 173, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 195, 196, 200, 201], "left_sourc": [159, 165], "right_sourc": [159, 165], "map": [164, 165, 204, 236, 440, 616, 815, 885, 1070, 1102, 1105, 1109, 1112, 1114, 1119, 1123, 1130, 1132, 1145, 1148, 1155, 1158, 1159, 1166, 1168, 1169, 1170, 1174, 1176, 1178, 1179, 1180, 1181, 1184, 1185, 1186, 1190, 1196, 1197], "arbitrarili": [165, 175, 193], "ed": 165, "text_annot": [171, 174, 180, 189, 192, 197, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1129, 1184], "definit": [202, 295, 373, 376, 383, 391, 396, 397, 423, 440, 443, 445, 446, 453, 472, 475, 476, 478, 479, 481, 483, 491, 498, 504, 508, 512, 515, 524, 532, 533, 538, 543, 544, 548, 568, 616, 672, 697, 744, 813, 845, 863, 864, 885, 917, 1029, 1098, 1103, 1109, 1112, 1122, 1123, 1133, 1134, 1140, 1148, 1170, 1174, 1176, 1177, 1183, 1185, 1196], "axiom": [203, 204, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 406, 408, 414, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 437, 439, 440, 444, 445, 446, 449, 451, 454, 456, 457, 460, 463, 466, 467, 469, 470, 473, 474, 477, 478, 479, 482, 483, 487, 491, 507, 508, 509, 510, 511, 512, 513, 514, 515, 524, 525, 530, 533, 536, 538, 539, 543, 544, 545, 548, 553, 554, 555, 556, 557, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 576, 578, 579, 580, 581, 583, 585, 586, 587, 589, 590, 591, 592, 594, 595, 596, 597, 599, 600, 601, 602, 603, 604, 605, 606, 609, 610, 611, 612, 613, 615, 616, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 638, 640, 649, 650, 652, 655, 658, 660, 661, 663, 666, 667, 668, 669, 671, 674, 845, 880, 885, 902, 911, 1107, 1109, 1110, 1111, 1112, 1114, 1116, 1117, 1120, 1126, 1135, 1140, 1143, 1166, 1170, 1172, 1177, 1196], "orient": [203, 440, 451, 1102, 1107, 1111, 1133, 1135, 1176], "contrast": [203, 1109, 1135], "intention": [204, 376, 383, 397, 408, 414, 420, 478, 1111, 1135, 1170], "overlap": [204, 1120], "lossi": [204, 1170], "respect": [204, 1120, 1132, 1184], "datatyp": [204, 376, 383, 408, 414, 420, 440, 476, 845, 871, 885, 1109], "enumer": 204, "subset": [204, 391, 397, 449, 479, 483, 487, 491, 505, 512, 513, 514, 515, 524, 529, 530, 533, 535, 536, 538, 544, 545, 548, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 585, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 608, 609, 611, 612, 613, 615, 620, 623, 626, 628, 638, 649, 650, 655, 658, 660, 661, 667, 668, 669, 671, 696, 723, 830, 845, 850, 851, 852, 855, 858, 859, 860, 863, 864, 871, 872, 873, 875, 876, 877, 879, 880, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 901, 902, 906, 908, 911, 912, 914, 915, 918, 919, 1105, 1107, 1109, 1120, 1126, 1139, 1163, 1168, 1169, 1170, 1172, 1174, 1181, 1183], "similar": [204, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 805, 806, 807, 808, 809, 810, 811, 812, 814, 1103, 1109, 1110, 1111, 1114, 1117, 1118, 1126, 1129, 1130, 1135, 1168, 1169, 1174], "statist": [204, 818, 820, 827, 830, 831, 841, 842, 843, 845, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 863, 864, 866, 867, 868, 869, 871, 872, 873, 875, 876, 877, 878, 879, 880, 882, 883, 884, 886, 889, 890, 891, 892, 893, 895, 896, 897, 898, 899, 900, 901, 902, 904, 906, 908, 909, 910, 911, 912, 914, 915, 918, 919, 922, 923, 1121, 1130, 1131, 1168, 1174], "taxon": [204, 830, 856, 942, 944, 945, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 971, 972, 1130, 1161], "constraint": [204, 498, 616, 942, 944, 945, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 1064, 1130, 1170, 1185], "lexic": [204, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 309, 310, 311, 312, 321, 322, 332, 333, 334, 335, 338, 339, 340, 345, 350, 351, 352, 355, 358, 360, 362, 363, 366, 368, 370, 372, 1106, 1112, 1116, 1130, 1132, 1143, 1168, 1170, 1185], "item": [205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 238, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 818, 828, 885, 1140, 1170, 1171, 1181], "list": [205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 322, 376, 383, 385, 391, 392, 397, 406, 408, 414, 420, 422, 423, 424, 427, 431, 433, 435, 438, 440, 445, 457, 467, 468, 470, 478, 696, 719, 783, 992, 1000, 1004, 1028, 1102, 1105, 1109, 1110, 1112, 1113, 1116, 1117, 1120, 1122, 1126, 1132, 1134, 1135, 1143, 1144, 1148, 1151, 1157, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1186], "itemlistel": [214, 219, 236], "listitem": [214, 225, 232, 234, 236, 237, 239, 241, 245, 246], "numberofitem": [214, 216, 236], "itemlistordertyp": [214, 236, 244], "itemmetadatamap": [214, 219, 236], "keyword": [214, 230, 236, 1148, 1186], "additionaltyp": [214, 236], "wasgeneratedbi": [214, 236], "script": [214, 236, 249], "itemlistcollect": [214, 236, 240], "close": [214, 376, 397, 408, 409, 414, 420, 478, 491, 1109, 1133, 1141, 1185], "close_map": [214, 376, 408, 414, 420, 478, 479, 483, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 567, 569, 572, 575, 620, 676], "henc": 214, "mtor": 214, "pathwai": [214, 1169], "shop": 214, "bui": 214, "supermarket": 214, "singular_nam": [214, 230, 239, 242], "uncontrol": [214, 230], "dcterm": [214, 230, 479, 483, 488, 491, 505, 506, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 565, 567, 569, 572, 575, 620, 629, 630, 663, 668, 670, 838, 874, 916], "microdata": [214, 229], "rdfa": [214, 229], "better": [214, 229, 1104, 1121, 1132, 1144], "weaker": [214, 229], "itemlist": [215, 219, 225, 229, 230, 231, 232, 233, 234, 235, 236, 239, 241, 242, 243, 244, 247, 248, 249, 1171], "catalog": 215, "around": [215, 1107, 1108, 1109, 1110, 1132, 1138, 1176], "ascend": 216, "itemlistorderascend": 216, "descend": [216, 942, 956, 958, 959, 962, 1102, 1103, 1105, 1109, 1111, 1121, 1126, 1135, 1138, 1169, 1171, 1174, 1176], "itemlistorderdescend": 216, "unord": 216, "itemlistunord": 216, "enum_uri": 216, "elementid": [219, 236], "idtyp": [219, 236], "previousitem": [219, 236], "previou": [219, 236, 246, 1120, 1132], "proper": [219, 225, 232, 1181], "symbol": [219, 225, 232, 234, 235, 701, 1132, 1186], "url": [225, 236, 421, 488, 549, 616, 1038, 1070, 1109, 1113, 1122, 1148, 1170], "mgi": [225, 235], "lexicaltransformationpipelin": [251, 265, 266, 271, 281, 284, 286, 287, 293, 296, 310, 311, 321, 335, 345, 351, 352, 370], "lexicaltransform": [251, 252, 267, 281, 285, 293, 294, 296, 297, 312, 335, 350, 370, 372], "ontolexindex": [251, 252, 264, 265, 266, 267, 271, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294], "relationshiptoterm": [264, 267, 278, 279, 281, 286, 288, 289, 290, 291, 309, 312, 332, 333, 335, 351, 355, 360, 363, 366], "lexicalindex": [264, 267, 280, 281, 287, 309, 312, 334, 335, 352, 1184], "lexicalgroup": [265, 271, 280, 281, 289, 292, 310, 321, 334, 335, 360, 368], "transform": [266, 267, 275, 281, 284, 285, 294, 311, 312, 328, 335, 345, 350, 372, 996, 1004, 1116], "appli": [266, 267, 275, 281, 284, 285, 293, 294, 311, 312, 313, 325, 328, 335, 345, 350, 353, 370, 372, 392, 440, 820, 885, 898, 944, 956, 968, 996, 1004, 1109, 1118, 1121, 1130, 1131, 1140, 1155, 1178, 1184, 1196], "activ": [266, 267, 281, 311, 312, 335, 842, 848, 878, 885, 910, 922, 1118, 1121, 1132, 1172, 1178], "transformationtyp": [266, 281, 294, 311, 335, 372, 1004], "paramet": [266, 281, 285, 311, 335, 350, 1049, 1061, 1067, 1070, 1073, 1083, 1086, 1097, 1100, 1122, 1131, 1145, 1147, 1148, 1149, 1166, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1186, 1197], "fashion": [267, 281, 312, 335, 1109], "element_term": [271, 281, 321, 335], "synonym": [271, 275, 281, 313, 321, 322, 326, 328, 331, 335, 342, 343, 358, 359, 361, 362, 369, 376, 397, 409, 414, 416, 423, 440, 441, 443, 446, 453, 468, 475, 476, 478, 479, 483, 488, 491, 510, 512, 513, 514, 515, 524, 530, 533, 538, 543, 544, 548, 553, 587, 601, 603, 604, 609, 616, 697, 845, 876, 885, 914, 915, 992, 1003, 1004, 1106, 1109, 1112, 1114, 1130, 1140, 1148, 1170, 1180, 1184, 1196], "stem": [275, 328, 996, 1122, 1148], "wo": [275, 328, 996], "lemmat": [275, 328, 996], "contextu": [275, 328, 996, 1110, 1111], "reduct": [275, 328, 996, 1182], "its": [275, 328, 506, 942, 958, 959, 996, 1110, 1112, 1117, 1118, 1122, 1126, 1140, 1186], "wordordernorm": [275, 328, 996], "reorder": [275, 328, 996], "deplur": [275, 328, 996], "plural": [275, 328, 996], "singular": [275, 328, 996], "casenorm": [275, 328, 996], "lowercas": [275, 328, 996], "whitespacenorm": [275, 328, 996], "condens": [275, 328, 996], "white": [275, 328, 996], "termexpanson": [275, 328, 996], "fa": [284, 293, 345, 370], "transf": [285, 294, 350, 372], "mappingrul": [296, 297, 309, 310, 311, 312, 314, 318, 319, 321, 322, 325, 326, 331, 332, 333, 334, 335, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374], "precondit": [313, 331, 335, 341, 346, 347, 348, 353, 357, 364, 365, 367, 371, 506], "postcondit": [313, 331, 335, 348, 354, 356, 367, 374, 506, 529], "onewai": [313, 335], "switch": [313, 335, 348, 1132], "invert": [313, 318, 335, 348, 356], "criteria": [313, 335, 354, 1177], "fire": [313, 335, 354], "condit": [313, 335, 353, 354, 1170, 1175], "mappingrulecollect": [313, 322, 335, 344, 362, 1184], "ifabs": [313, 348], "minimum_confid": [314, 335], "ruleset": [314, 325, 326, 335, 358, 362], "tree_root": 314, "predicate_id": [318, 335, 991, 1004, 1043, 1070, 1117, 1132], "increas": [318, 335, 374, 1110, 1120], "neg": [318, 335, 374, 783, 784, 1176], "decreas": [318, 335, 374], "see_also": [318, 374, 391, 396, 399, 413, 415, 437, 439, 463, 479, 483, 491, 498, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599], "en": [318, 374, 1110, 1119, 1126, 1170, 1196], "wikipedia": [318, 374, 1102, 1121, 1129, 1132, 1175], "wiki": [318, 374, 480, 481], "logit": [318, 374], "upload": [318, 374, 480, 481, 1122, 1148], "wikimedia": [318, 374], "57": [318, 374], "pattern": [319, 335, 341, 346, 347, 357, 364, 365, 371, 479, 506, 512, 529, 535, 546, 1064, 1113, 1122, 1126, 1130, 1132, 1135, 1139, 1144, 1146, 1167, 1169], "subject_source_one_of": [319, 335], "object_source_one_of": [319, 335], "mapping_source_one_of": [319, 335], "subject_match_field_one_of": [319, 335], "object_match_field_one_of": [319, 335], "transformations_included_in": [319, 335], "predicate_id_one_of": [319, 335], "qualifi": [322, 325, 326, 335], "reg": [325, 335, 342, 343, 361], "ex": [325, 335, 342, 343, 361], "match_scop": [325, 335], "scope": [325, 335, 343, 409, 416, 440, 510, 720, 738, 845, 885, 915, 1105, 1118, 1170], "app": [331, 348, 353, 354, 367], "regularexpressionstr": 335, "mapping_rules_datamodel": 339, "domainrangeaxiom": [375, 387, 391, 397, 406, 422, 432, 440, 446, 451, 454, 460], "equivalentnodesset": [375, 391, 397, 440, 446, 448, 461], "logicaldefinitionaxiom": [375, 389, 391, 397, 428, 437, 440, 446, 451, 463, 1176], "disjointclassexpressionsaxiom": [375, 389, 397, 425, 426, 440, 446, 473, 474, 1176], "propertychainaxiom": [375, 385, 391, 397, 424, 440, 446, 454, 533, 548, 616, 631], "geneontologi": [375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 1113, 1182, 1196], "alias": [375, 376, 383, 385, 387, 388, 391, 392, 399, 406, 413, 414, 415, 420, 479, 483, 506, 512, 515, 524, 533, 538, 543, 548, 992, 1003, 1004, 1107, 1112, 1114, 1130, 1170, 1175, 1180, 1196], "graphdocu": [375, 376, 383, 384, 385, 387, 388, 391, 396, 397, 399, 405, 406, 408, 414, 420, 438, 440, 446, 451, 456, 1147, 1148, 1149, 1157], "pred": [376, 383, 387, 408, 409, 414, 415, 420, 440, 1107, 1110, 1169], "val": [376, 383, 408, 414, 420, 440, 1110], "xrefstr": [376, 383, 408, 414, 420, 440, 478], "valtyp": [376, 383, 408, 414, 420, 440], "lang": [376, 383, 408, 414, 420, 440, 1170], "synonympropertyvalu": [376, 383, 387, 397, 408, 415, 420, 440, 441, 443, 446, 453, 468, 470, 475, 476, 478, 1176], "synonymtypedefinit": [376, 383, 387, 391, 399, 408, 413, 414, 420, 439, 440, 444, 453], "websit": [376, 383, 397, 408, 414, 420, 421, 478, 1104], "weak": [376, 397, 408, 414, 420, 478, 1111], "seealso": [376, 397, 408, 414, 420, 478, 479, 483, 488, 491, 511, 512, 515, 524, 533, 538, 543, 544, 545, 548, 616, 1170], "agent": [383, 483, 487, 491, 509, 512, 513, 514, 515, 524, 529, 530, 533, 535, 536, 538, 543, 544, 545, 548, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 628, 638, 649, 650, 658, 661, 667, 668, 669, 671, 819, 831, 838, 842, 843, 845, 848, 884, 885, 888, 922, 1061, 1070, 1083], "link": [383, 1038, 1068, 1070, 1071, 1072, 1075, 1076, 1079, 1080, 1087, 1088, 1089, 1095, 1096, 1099, 1109, 1113, 1117, 1121, 1134, 1159], "plai": [383, 1132], "mutual": [384, 388, 425, 426, 440, 446, 448, 461, 473, 474, 1132], "classid": [384, 440, 474], "classexpress": [384, 389, 440, 474, 486, 491, 500, 533, 539, 540, 544, 548, 559, 564, 583, 588, 616, 618, 633, 646, 648, 664, 673], "existentialrestrictionexpress": [384, 396, 425, 436, 440, 458, 463, 474], "unionequivalentto": [384, 440], "disjointunion": [384, 440, 473, 1177], "unionequivalenttoexpress": [384, 389, 440], "ot": [384, 440, 474], "predicateid": [385, 406, 440], "domainclassid": [385, 440], "rangeclassid": [385, 440], "allvaluesfromedg": [385, 387, 391, 440], "subpropertyof": [387, 391, 434, 440], "equivalentto": [387, 440], "obj": [387, 440], "head": [387, 465], "tail": [387, 450, 1143], "cliqu": [388, 391, 435, 440, 446, 448, 461, 1176], "equivalentclass": [388, 396, 491, 492, 540, 616, 631, 633, 1116, 1117, 1132, 1171, 1177], "representativenodeid": [388, 440], "cliq": [388, 440], "nodeid": [388, 440], "fstring": [389, 396], "objectsomevaluesfrom": [389, 1170, 1179], "oboidentifierstr": [391, 399, 413, 415, 439, 440], "lbl": [391, 399, 413, 415, 440], "subsetdefinit": [391, 399, 415, 439, 440, 444], "ter": [391, 440], "owlcollab": [391, 399, 403, 413, 415, 416, 421, 439, 1109], "oboformat": [391, 399, 403, 413, 415, 416, 421, 439, 1109], "legaci": [391, 399, 413, 415, 421, 444], "0008150": [391, 392, 456, 1170], "go_0008150": [391, 392, 456], "objectpropertyassert": [391, 434, 1177], "frequent": [392, 1109, 1111], "differenti": [396, 440, 463, 1116, 1172], "objectintersectionof": 396, "89": [396, 437, 463], "somevaluesfrom": [396, 463, 540, 616, 631, 1105, 1111, 1170], "affect": [397, 440], "belong": [397, 440, 467, 479, 483, 491, 505, 512, 515, 524, 533, 538, 543, 544, 548, 615, 616, 1122, 1170], "definitionpropertyvalu": [397, 408, 429, 440, 443, 446, 453, 475, 476, 478], "xrefpropertyvalu": [397, 408, 440, 443, 446, 453, 475, 476, 478], "basicpropertyvalu": [397, 408, 440, 443, 446, 453, 475, 476, 478], "predef": [397, 440], "insubset": [397, 467, 479, 483, 491, 505, 512, 515, 524, 533, 538, 543, 544, 548, 615], "versioninfo": [397, 477, 536, 616, 677, 838, 921], "histor": [397, 427, 1110, 1111, 1112, 1117], "carri": [397, 427], "awar": [397, 427], "0000115": [397, 429, 479, 483, 491, 508, 512, 515, 524, 533, 538, 543, 544, 548, 578, 1118], "predefin": [397, 423], "propertytyp": [399, 407, 440], "propertytypeenum": [399, 440, 459], "namedindividu": [400, 479, 483, 487, 491, 509, 512, 513, 514, 515, 529, 530, 533, 535, 536, 538, 543, 544, 545, 548, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 628, 638, 649, 650, 658, 661, 666, 667, 668, 669, 671, 827, 830, 841, 845, 895, 1170], "prefixedid": 403, "unprefixedid": 403, "info": [404, 410, 827, 830, 838, 841, 885, 921, 991, 1004, 1038, 1043, 1050, 1054, 1061, 1063, 1070, 1083, 1103, 1110, 1113, 1127, 1132, 1138, 1140, 1163], "hasexactsynonym": [404, 409, 479, 483, 488, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 603, 1107, 1110, 1118], "hasnarrowsynonym": [404, 409, 479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 604, 1110], "hasbroadsynonym": [404, 409, 479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 601, 1110], "hasrelatedsynonym": [404, 409, 479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 609, 1107, 1110], "go_": [405, 440, 1170], "strongli": [405, 455], "r1": [406, 440], "rn": [406, 440], "chainpredicateid": [406, 440], "claus": [406, 424, 440], "prope": [406, 440], "broader": [409, 1109, 1132], "bu": 409, "subsetproperti": [413, 1170], "synonymtyp": [414, 415, 440, 441, 1110], "synonymtypeidentifierstr": [414, 440, 468], "isexact": [414, 440], "scopeenum": [414, 440], "commonli": [416, 1109, 1196], "plain": [416, 701, 1110], "pmid": [420, 1111, 1132], "12345": 420, "registri": [421, 1186], "bioregistri": 421, "usag": [422, 432, 440, 446, 454, 460, 1109, 1110, 1112, 1121, 1131, 1132, 1168, 1172, 1178], "propert": [422, 432, 446, 454, 460], "principl": [440, 451, 1038, 1063, 1096, 1120], "attach": [440, 451, 697, 1170, 1178], "metedata": [440, 451], "Not": [440, 451, 1120, 1143, 1160], "obographs_datamodel": 440, "expr": 440, "nodetypeenum": 440, "objec": [443, 446, 453, 475, 476, 478], "benchmark": 452, "scopesenum": 464, "namedobject": [479, 483, 488, 491, 512, 515, 524, 533, 536, 538, 543, 544, 545, 548, 555, 611, 616, 671], "hassynonym": [479, 483, 484, 488, 491, 512, 513, 514, 515, 524, 525, 530, 533, 538, 543, 544, 548, 553, 587, 601, 603, 604, 609, 616, 665], "haslifecycl": [479, 483, 484, 487, 491, 512, 515, 524, 525, 529, 533, 535, 538, 543, 544, 545, 548, 566, 581, 594, 595, 596, 599, 606, 616, 661, 668], "hasproven": [479, 483, 484, 488, 491, 512, 515, 524, 525, 533, 536, 538, 543, 544, 548, 567, 569, 570, 571, 572, 575, 579, 586, 613, 616, 620, 649, 667, 669], "hasmap": [479, 483, 484, 488, 491, 512, 515, 524, 525, 533, 538, 543, 544, 545, 548, 558, 562, 574, 591, 616, 638], "hascategori": [479, 483, 484, 491, 512, 515, 524, 525, 533, 538, 543, 544, 545, 548, 560, 565, 605, 615, 616], "hasuserinform": [479, 483, 484, 488, 491, 512, 515, 524, 525, 533, 536, 538, 543, 544, 545, 548, 563, 573, 580, 592, 602, 612, 616, 650, 658], "hasminimalmetadata": [479, 483, 484, 488, 491, 512, 515, 524, 525, 533, 538, 543, 544, 548, 578, 616, 628], "has_exact_synonym": [479, 483, 488, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 616, 665], "labeltyp": [479, 483, 488, 491, 508, 510, 512, 515, 524, 533, 538, 543, 544, 548, 601, 603, 604, 609, 616, 628, 665], "has_narrow_synonym": [479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 616, 665], "has_broad_synonym": [479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 616, 665], "has_related_synonym": [479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 616], "alternative_term": [479, 480, 483, 491, 510, 512, 513, 514, 515, 524, 530, 533, 538, 543, 544, 548, 587, 601, 603, 604, 616, 665], "isa_alternative_term": [479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 553, 616], "iedb_alternative_term": [479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 553, 616], "editor_preferred_term": [479, 483, 491, 510, 512, 515, 524, 531, 533, 538, 543, 544, 548, 553, 616], "obo_foundry_unique_label": [479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 553, 616], "has_obsolescence_reason": [479, 483, 491, 506, 512, 515, 524, 533, 535, 538, 543, 544, 548, 616, 644], "term_replaced_bi": [479, 480, 483, 487, 491, 502, 506, 512, 515, 524, 531, 533, 535, 538, 543, 544, 548, 616, 644], "has_alternative_id": [479, 483, 491, 502, 506, 512, 515, 524, 529, 533, 538, 543, 544, 548, 616, 644], "excluded_from_qc_check": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 545, 548, 593, 616], "excluded_subclassof": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 593, 616], "excluded_synonym": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 593, 616], "should_conform_to": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 545, 548, 593, 616], "created_bi": [479, 483, 488, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 616, 653], "creator": [479, 483, 488, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 570, 616, 653, 1178], "came": [479, 483, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 569, 616], "editor_not": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 616, 653], "narrativetext": [479, 483, 491, 508, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 578, 586, 616, 670], "term_editor": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 616, 653], "definition_sourc": [479, 483, 491, 509, 512, 515, 521, 524, 531, 533, 538, 543, 544, 548, 616, 653], "ontology_term_request": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 616, 653], "imported_from": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 616, 653], "term_tracker_item": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 616, 653], "broadmatch": [479, 483, 491, 507, 512, 515, 524, 533, 538, 543, 544, 545, 548, 616, 632], "closematch": [479, 483, 491, 507, 512, 515, 524, 533, 538, 543, 544, 545, 548, 616, 632, 697, 1132], "narrowmatch": [479, 483, 491, 507, 512, 515, 524, 533, 538, 543, 544, 545, 548, 616, 632], "database_cross_refer": [479, 483, 488, 491, 507, 512, 515, 524, 533, 538, 543, 544, 548, 616, 632], "curieliter": [479, 483, 488, 491, 507, 512, 515, 524, 533, 538, 543, 544, 548, 574, 616], "has_obo_namespac": [479, 483, 491, 505, 512, 515, 524, 533, 538, 543, 544, 548, 616], "in_subset": [479, 483, 488, 491, 505, 506, 508, 509, 510, 511, 512, 515, 524, 533, 538, 543, 544, 548, 553, 561, 566, 578, 579, 581, 587, 592, 599, 616, 628, 668], "conformsto": [479, 483, 491, 505, 512, 515, 524, 533, 538, 543, 544, 545, 548, 616, 617], "example_of_usag": [479, 480, 483, 491, 511, 512, 515, 524, 533, 538, 543, 544, 548, 616, 617], "curator_not": [479, 483, 491, 511, 512, 515, 524, 533, 538, 543, 544, 548, 616, 653], "has_curation_statu": [479, 483, 491, 511, 512, 515, 524, 533, 538, 543, 544, 548, 616, 617], "depicted_bi": [479, 483, 491, 511, 512, 515, 524, 533, 538, 543, 544, 548, 616, 617], "page": [479, 483, 491, 511, 512, 515, 524, 533, 538, 543, 544, 548, 616, 617, 1109, 1112], "transitiveproperti": [479, 487, 491, 513, 514, 515, 524, 529, 530, 533, 535, 536, 538, 543, 545, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 583, 585, 586, 587, 589, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 619, 620, 623, 624, 626, 627, 628, 638, 649, 650, 652, 655, 658, 660, 661, 666, 667, 668, 669, 671, 1170], "homosapien": [479, 487, 491, 513, 514, 515, 524, 529, 530, 535, 536, 543, 545, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 628, 638, 649, 650, 658, 661, 667, 668, 669, 671], "orcid": [479, 512, 1110], "omoschema": [479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 498, 500, 505, 506, 507, 508, 509, 510, 511, 512, 515, 524, 525, 529, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 557, 568, 582, 593, 594, 595, 596, 608, 611, 617, 631, 632, 633, 641, 644, 651, 653, 656, 659, 661, 677], "id_prefix": [479, 512, 939, 943, 1170], "disjoint_with": [479, 483, 488, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 603], "allotrop": [479, 480, 481, 483, 488, 491, 506, 508, 510, 511, 512, 515, 524, 533, 538, 543, 544, 548, 553, 561, 578, 581, 592, 628, 668], "permit": [479, 483, 488, 491, 506, 509, 510, 511, 512, 515, 524, 533, 538, 543, 544, 548, 553, 561, 566, 579, 581, 587, 592, 599, 668], "0001847": [479, 483, 491, 510, 512, 514, 515, 524, 533, 538, 543, 544, 548], "9991118": [479, 483, 491, 510, 512, 513, 515, 524, 533, 538, 543, 544, 548], "0000111": [479, 483, 491, 510, 512, 515, 524, 533, 538, 543, 544, 548, 587], "uniquekei": [479, 483, 491, 510, 512, 515, 524, 530, 533, 538, 543, 544, 548], "0000589": [479, 483, 491, 510, 512, 515, 524, 530, 533, 538, 543, 544, 548], "obsoletion_related_properti": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 566, 581, 599, 606, 616, 668], "obsoleteaspect": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 566, 581, 606, 616, 668], "0000231": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 606, 1118], "isreplacedbi": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 668], "0100001": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 668, 1118, 1170], "owlc": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599], "owlapi": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 1177], "317": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599], "notobsoleteaspect": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 616], "hasalternativeid": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 599, 1118], "excluded_axiom": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 594, 595, 596, 616, 661], "hiddensynonym": [479, 483, 491, 506, 512, 515, 524, 533, 538, 543, 544, 548, 596], "2022": [479, 483, 488, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 570, 571, 1154], "04": [479, 483, 488, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 570, 571], "12": [479, 483, 488, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 570, 571], "deprecated_element_has_exact_replac": [479, 483, 488, 491, 509, 512, 515, 521, 522, 523, 524, 533, 538, 543, 544, 548, 570, 571, 627, 643], "provenance_properti": [479, 483, 488, 491, 509, 511, 512, 515, 524, 533, 536, 538, 543, 544, 548, 567, 569, 570, 571, 572, 573, 575, 576, 579, 586, 600, 613, 616, 649, 663, 667, 669], "wasattributedto": [479, 483, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 567, 572], "structured_pattern": [479, 483, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 567, 572], "orcid_regex": [479, 483, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 567, 572], "interpol": [479, 483, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 567, 572], "partial_match": [479, 483, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 567, 572], "pav": [479, 483, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 569, 575, 620, 676], "createdon": [479, 483, 491, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 569], "authoredon": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 575], "importedfrom": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 620], "0000116": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 586], "narr": [479, 483, 491, 508, 509, 512, 515, 524, 533, 536, 538, 543, 544, 548, 578, 586, 670], "0000117": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 667], "0000119": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 579], "0000234": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 649], "0000412": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 613], "0000233": [479, 483, 491, 509, 512, 515, 524, 533, 538, 543, 544, 548, 669], "informative_properti": [479, 483, 488, 491, 505, 511, 512, 515, 524, 533, 536, 538, 543, 544, 548, 560, 561, 563, 565, 577, 580, 592, 602, 607, 612, 616, 629, 630, 650], "sdo": [479, 483, 491, 511, 512, 515, 524, 533, 538, 543, 544, 548, 612], "0000112": [479, 483, 491, 511, 512, 515, 524, 533, 538, 543, 544, 548, 592], "0000232": [479, 483, 491, 511, 512, 515, 524, 533, 538, 543, 544, 548, 573], "0000114": [479, 483, 491, 511, 512, 515, 524, 533, 538, 543, 544, 548, 602], "foaf": [479, 483, 491, 511, 512, 515, 524, 533, 538, 543, 544, 548, 580, 650, 1119, 1196], "guidelin": [479, 488, 508, 512, 515, 524, 544, 628, 1103, 1130, 1144], "core_properti": [479, 483, 488, 491, 508, 512, 515, 524, 525, 533, 536, 538, 543, 544, 548, 578, 611, 616, 628], "aristotelian": [479, 508, 512, 515, 524, 544, 578, 1116], "logical_pred": [479, 483, 491, 492, 512, 515, 524, 525, 533, 536, 538, 539, 540, 543, 544, 545, 548, 552, 559, 564, 583, 584, 585, 588, 589, 598, 616, 618, 619, 634, 635, 636, 637, 646, 647, 648, 652, 654, 655, 657, 662, 664, 671, 673], "designates_typ": [479, 483, 491, 512, 515, 524, 525, 533, 536, 538, 543, 544, 545, 548, 671], "gitlab": [480, 481], "devop": [480, 481], "allotrope_framework_term_curation_style_guid": [480, 481], "pdf": [480, 481, 498], "changenot": [480, 616, 617], "reifi": [482, 616, 641, 651], "relational_rol": [482, 488, 554, 555, 556, 641, 651], "represents_relationship": [482, 488], "is_class_level": [483, 533, 538, 543, 548, 616], "is_metadata_tag": [483, 533, 538, 543, 548, 616], "annotatedproperti": [483, 488, 616, 656], "has_synonym_typ": [483, 488, 616], "root": [485, 616, 1109, 1132, 1170, 1174, 1176, 1183], "anonymousclassexpress": [485, 540, 616], "anonym": [486, 540, 616, 845, 851, 852, 885, 886, 1116, 1170], "annotatedtarget": [487, 488, 616, 656], "annotatedsourc": [488, 525, 616, 656], "is_inf": [488, 616], "has_axiom_label": [488, 545, 616, 653], "is_a_defining_property_chain_axiom": [488, 616], "is_a_defining_property_chain_axiom_where_second_argument_is_reflex": [488, 616], "date_retriev": [488, 616, 653], "external_ontologi": [488, 616], "reification_pred": [488, 554, 555, 556, 616], "dc": [488, 536, 663], "0010000": [488, 600], "0002581": [488, 621], "0002582": [488, 622], "hassynonymtyp": [488, 610], "never_in_taxon": [491, 616], "disconnected_from": [491, 616, 659], "has_rank": [491, 545, 616], "disjointwith": [491, 492, 533, 539, 540, 548, 616, 631], "intersectionof": [491, 492, 540, 616, 631], "complementof": [491, 492, 540, 616, 631], "oneof": [491, 492, 540, 616, 631], "unionof": [491, 492, 540, 616, 631], "has_ontology_root_term": [491, 536, 616, 617], "0002161": [491, 639, 942, 958], "shortcut_annotation_properti": [491, 582, 616], "taxslim": [491, 608], "propertyexpress": [491, 492, 500, 533, 538, 540, 548, 583, 616, 647], "match_aspect": [491, 492, 533, 540, 548, 558, 562, 574, 588, 589, 591, 616, 631, 632, 638, 657], "definitionconstraint": 498, "dcc": 498, "problem": [498, 1043, 1070, 1185, 1196], "definitionpres": 498, "s0": 498, "s1": 498, "harmon": 498, "genusdifferentiaform": 498, "s3": [498, 1127, 1138, 1186], "singlegenu": 498, "circular": [498, 1116], "s7": 498, "matchtextandlog": 498, "s11": 498, "305": 498, "philpap": 498, "archiv": 498, "sepgfw": 498, "annotationpropertymixin": [505, 506, 507, 508, 509, 510, 511, 616], "namedth": [505, 506, 507, 508, 509, 510, 511, 513, 514, 530, 544, 553, 558, 560, 562, 563, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 578, 579, 580, 581, 586, 587, 591, 592, 594, 595, 596, 599, 601, 602, 603, 604, 605, 606, 609, 611, 612, 613, 615, 616, 620, 628, 638, 649, 650, 658, 661, 667, 668, 669, 671], "slot_condit": [506, 529, 535], "any_of": [506, 680, 720], "none_of": [506, 529, 680, 720], "absolut": [508, 578, 616, 628], "whose": [510, 513, 514, 530, 553, 587, 601, 603, 604, 609, 616, 845, 885, 919, 1109, 1110, 1120, 1140], "four": 510, "subproperti": 510, "0000101": 515, "tidi": 520, "ncit": [521, 522, 523, 1110, 1170], "p378": 521, "p384": 522, "p383": 523, "temporal_interpret": [524, 533, 548, 616], "auto": [529, 535, 616, 1170, 1172, 1173, 1175, 1179, 1180, 1182, 1185], "classifi": [529, 535, 616, 1120], "classification_rul": [529, 535], "jsonobj": [529, 1180, 1184, 1197], "is_cycl": [533, 548, 616], "is_transit": [533, 548, 616, 1120], "equivalentproperti": [533, 538, 548, 616, 631, 633], "inverseof": [533, 538, 548, 616, 631], "0001900": [533, 548, 666], "licens": [536, 545, 616, 617], "versioniri": [536, 616, 677, 838, 920], "0000700": [536, 607], "version_properti": [536, 616, 675, 676], "onproperti": [539, 540, 616, 631], "allvaluesfrom": [540, 616, 631], "proteg": 577, "defaultlanguag": [616, 617], "distinctmemb": [616, 631], "hasvalu": [616, 631], "maxqualifiedcardin": [616, 631], "mincardin": [616, 631], "minqualifiedcardin": [616, 631], "ncit_definition_sourc": 616, "ncit_term_sourc": 616, "ncit_term_typ": 616, "oboinowl_id": 616, "oboinowl_ontologi": 616, "lifecycl": [616, 644, 1118], "onclass": [616, 631], "qualifiedcardin": [616, 631], "samea": [616, 631, 633, 1117], "definitionconstraintcompon": 616, "irityp": 616, "tidystr": 616, "urlliter": 616, "allotropepermittedprofil": 616, "allotroperequiredprofil": 616, "gopermittedprofil": 616, "gorecommendedprofil": 616, "gorequiredprofil": 616, "obipermittedprofil": 616, "obirequiredprofil": 616, "dce": 629, "OR": [679, 1105, 1175, 1186, 1197], "xor": 679, "ontosearch": [680, 695, 696, 698, 699, 707, 708, 709, 710, 711, 712, 713, 714, 719, 721, 722, 723, 725, 726, 727, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743], "all_of": [680, 720], "path_to": [680, 720], "searchbaseconfigur": [680, 695, 699, 709, 710, 711, 712, 713, 719, 720, 721, 722, 723, 725, 734, 739, 740, 742], "descendant_of": 688, "ancestor_of": 688, "proper_descendant_of": 688, "proper_ancestor_of": 688, "parent_of": 688, "child_of": 688, "queri": [695, 696, 714, 720, 739, 740, 743, 1106, 1107, 1109, 1111, 1114, 1117, 1118, 1119, 1120, 1126, 1127, 1131, 1133, 1134, 1136, 1138, 1140, 1143, 1151, 1166, 1167, 1169, 1170, 1174, 1176, 1180, 1185, 1186, 1196], "graphfunct": [695, 720, 743], "graph_pred": [695, 720], "search_term": [695, 696, 720, 1180], "searchterm": [696, 720, 740], "searchtermsyntax": [696, 720, 742, 1151, 1180, 1197], "searchproperti": [696, 720, 734, 1180], "batch": [696, 720, 725, 1144, 1167], "cursor": [696, 699, 720], "exce": [696, 720], "iterat": [696, 720], "is_parti": [696, 720, 721, 1180], "is_complet": [696, 720], "include_obsoletes_in_result": [696, 720], "is_fuzzi": [696, 720], "force_case_insensit": [696, 720], "insensit": [696, 713, 720], "complexqueri": [696, 707, 708, 709, 720, 727, 733], "pathexpress": [696, 714, 720, 739, 743], "searchresultset": [696, 698, 711, 712, 720, 736, 737], "searchconfigur": [696, 1151, 1174, 1180, 1197], "replacement_identifi": 697, "mapped_identifi": [697, 1180], "informative_text": 697, "low": [698, 720, 735, 1144], "object_sourc": [698, 720, 768, 783, 845, 885, 890, 892, 991, 1004, 1117, 1132, 1175], "object_source_vers": [698, 720], "object_match_field": [698, 720], "matches_full_search_term": [698, 720], "snippet": [698, 720], "searchresult": [699, 720, 726, 728, 729, 730, 731, 732, 735, 737, 741], "result_count": [699, 720], "plaintext": [701, 1197], "regular_express": [701, 1151, 1180, 1197], "regular": [701, 1064, 1132, 1180], "ecmascript": 701, "percent": 701, "lucen": 701, "solr": [701, 1140], "starts_with": 701, "searc": 701, "operat": [710, 712, 713, 719, 721, 722, 723, 725, 734, 740, 742], "search_datamodel": [715, 716, 717, 718, 724], "layer": [720, 738, 1112, 1138, 1166], "servic": [720, 738, 1105, 1109, 1154, 1155, 1161, 1168, 1171, 1186], "cover": [720, 738], "googl": [720, 738, 1126], "although": [720, 738, 1109, 1110, 1112, 1113, 1118, 1121, 1161], "could": [720, 738, 845, 885, 919, 1102, 1109, 1112, 1126, 1144], "booleanoper": 720, "orm": [745, 1131, 1155], "sim": [746, 764, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 788, 789, 790, 791, 792, 793, 794, 795, 797, 800, 801, 802, 803, 804, 805, 807, 810, 811, 812, 814, 1169], "match_sourc": [746, 783], "match_source_label": [746, 783], "match_target": [746, 783], "match_target_label": [746, 783], "match_subsum": [746, 783], "match_subsumer_label": [746, 783], "termpairwisesimilar": [746, 764, 774, 775, 776, 777, 780, 781, 783, 786, 796, 797, 798, 799, 802, 804, 806, 807, 808, 809, 1181], "termsetpairwisesimilar": [746, 764, 767, 778, 779, 783, 794, 795, 800, 805, 810, 1121, 1169], "subject_best_match": [746, 769, 783], "object_best_match": [746, 769, 783], "subject_termset": [767, 769, 783], "object_termset": [767, 769, 783], "pairwisesimilar": [768, 769, 783], "subject_id": [768, 783, 1043, 1070, 1102, 1117, 1132, 1175], "subject_sourc": [768, 783, 981, 991, 1004, 1117, 1132], "ancestor_id": [768, 783], "ancestor_label": [768, 783], "ancestor_sourc": [768, 783], "object_information_cont": [768, 783, 784], "negativelogvalu": [768, 775, 783, 784, 797, 807], "subject_information_cont": [768, 783, 784], "ancestor_information_cont": [768, 783, 784], "jaccard_similar": [768, 783, 802, 803], "zerotoon": [768, 781, 783, 786, 801, 811, 812], "intersect": [768, 783, 786], "cosine_similar": [768, 783, 803], "dot": [768, 780, 783], "embed": [768, 780, 783, 1121], "dice_similar": [768, 783, 803], "nonnegativefloat": [768, 783, 802], "geometr": [768, 783, 802], "content": [768, 783, 802, 1109, 1134, 1167, 1170, 1173, 1181], "bestmatch": [768, 769, 783, 788, 789, 790, 791, 792, 793, 795, 803, 804, 805], "decid": [768, 774, 1120, 1169, 1185], "ancesto": [768, 774], "information_cont": [768, 775, 783, 797, 802, 803, 807], "sqrt": [768, 802], "terminfo": [769, 782, 783, 787, 800, 810], "average_scor": [769, 783], "best_scor": [769, 783], "intersection_count": [783, 803], "overlap_coeffici": [783, 803], "subsumed_by_scor": [783, 803], "subsumes_scor": [783, 803], "union_count": [783, 803], "itemcount": [783, 785, 814], "summarystatisticsreport": [816, 819, 831, 838, 842, 845, 849, 866, 884, 885, 900, 923], "groupedstatist": [816, 838, 842, 843, 845, 849, 866, 884, 885, 900, 904, 923, 1183], "ungroupedstatist": [816, 818, 820, 828, 831, 838, 842, 843, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 866, 869, 871, 872, 873, 875, 876, 877, 879, 880, 884, 885, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 900, 901, 902, 904, 906, 908, 911, 912, 914, 915, 918, 919, 923, 1183], "summarystatisticscalculationact": [816, 831, 843, 845, 848, 878, 885, 910, 922, 923], "was_associated_with": [816, 842, 885], "acted_on_behalf_of": [816, 842, 885], "summary_statist": [816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 916, 918, 919, 920, 921, 922, 923], "contributorrol": [816, 831, 838, 843, 845, 884, 885], "filtered_count": [818, 828, 885], "change_summari": [818, 845, 885], "facetedcount": [818, 820, 845, 859, 860, 877, 879, 882, 883, 885, 890, 891, 892, 909, 915], "contributor_id": [820, 885], "contributor_nam": [820, 885], "normalization_com": [820, 885], "role_count": [820, 828, 885], "contributor_summari": [820, 845, 885], "summarystatisticcollect": [827, 830], "class_count": [827, 830, 841, 845, 870, 885], "anonymous_class_expression_count": [827, 830, 841, 845, 870, 885], "unsatisfiable_class_count": [827, 830, 841, 845, 870, 885], "class_count_excluding_deprec": [827, 830, 841], "class_count_with_definit": [827, 830, 841], "property_count": [827, 830, 841, 845, 870, 885], "object_property_count": [827, 830, 841, 845, 870, 885], "datatype_property_count": [827, 830, 841, 845, 870, 885], "annotation_property_count": [827, 830, 841, 845, 870, 885], "individual_count": [827, 830, 841, 845, 852, 870, 885], "named_individual_count": [827, 830, 841, 845, 852, 870, 885], "anonymous_individual_count": [827, 830, 841, 845, 870, 885], "untyped_entity_count": [827, 830, 841, 845, 870, 885], "description_logic_profil": [827, 830, 841, 845, 885], "owl_axiom_count": [827, 830, 841, 845, 870, 885], "rdf_triple_count": [827, 830, 841, 845, 870, 885], "subclass_of_axiom_count": [827, 830, 841, 845, 870, 885], "equivalentclasses_axiom_count": [827, 830, 841], "distinct_synonym_count": [827, 830, 841, 845, 870, 885], "synonym_statement_count": [827, 830, 841, 845, 870, 885], "mapping_count": [827, 830, 841, 845, 870, 885], "ontology_count": [827, 830, 841, 845, 870, 885], "globalstatist": [827, 841], "by_categori": [827, 830], "by_taxon": [827, 830], "by_ontologi": [827, 830], "by_subset": [827, 830], "count_statist": [827, 830, 841, 845, 850, 851, 852, 858, 861, 862, 863, 864, 871, 872, 873, 876, 880, 881, 885, 886, 889, 893, 895, 896, 897, 899, 901, 902, 906, 908, 911, 912, 914, 918, 919], "class_statistic_group": [827, 830, 841, 845, 851, 858, 863, 864, 872, 885, 893, 896, 918], "property_statistic_group": [827, 830, 841, 845, 850, 871, 873, 885, 897, 899, 906], "individual_statistic_group": [827, 830, 841, 845, 852, 885, 886, 895], "count_of": [827, 830, 841, 865, 907], "owl_statistic_group": [827, 830, 841, 845, 875, 880, 885, 902, 908, 911], "metadata_statistic_group": [827, 830, 841, 845, 859, 860, 876, 877, 879, 885, 889, 890, 891, 892, 914, 915], "edge_count_by_pred": [828, 845, 885], "entailed_edge_count_by_pred": [828, 845, 885], "synonym_statement_count_by_pred": [828, 845, 885], "class_count_by_subset": [828, 845, 885], "class_count_by_categori": [828, 845, 885], "mapping_statement_count_by_pred": [828, 845, 885], "mapping_statement_count_by_object_sourc": [828, 845, 885, 892], "mapping_statement_count_subject_by_object_sourc": [828, 845, 885], "contributorstatist": [828, 845, 867, 868, 869, 885, 898, 909], "changetypestatist": [828, 845, 857, 882, 883, 885], "facetstatist": [830, 841, 853, 854, 855, 856], "mf": [830, 831, 904], "bp": [830, 831, 904], "cc": [830, 831, 904], "sens": [830, 1109, 1112, 1116, 1143], "metagenomics_slim": 830, "compared_with": [831, 838, 843, 845, 885], "was_generated_bi": [831, 842, 843, 845, 885], "version_info": [838, 885], "started_at_tim": [842, 885], "ended_at_tim": [842, 885], "behalf": [842, 848, 885], "startedattim": [842, 910], "endedattim": [842, 878], "wasassociatedwith": [842, 922], "actedonbehalfof": [842, 848], "unsatisfi": [845, 885, 918, 942, 956, 1129, 1185], "deprecated_class_count": [845, 870, 885], "non_deprecated_class_count": [845, 870, 885], "merged_class_count": [845, 870, 885], "class_count_with_text_definit": [845, 870, 885], "class_count_without_text_definit": [845, 870, 885], "deprecated_object_property_count": [845, 870, 885], "non_deprecated_object_property_count": [845, 870, 885], "subset_count": [845, 870, 885], "slim": [845, 860, 885, 912, 1170], "equivalent_classes_axiom_count": [845, 870, 885], "exter": [845, 885], "notdeprec": [845, 896, 897], "hastextdefinit": [845, 863], "nothastextdefinit": [845, 864], "anonymousindividu": [845, 852], "el": [845, 875], "dl": [845, 875], "entailededg": [845, 879, 1155, 1166], "objectsourc": [845, 890, 892], "reportby_categori": 853, "reportby_ontologi": 854, "reportby_subset": 855, "reportby_taxon": 856, "reportclass_count_excluding_deprec": 861, "reportclass_count_with_definit": 862, "reportequivalentclasses_axiom_count": 881, "taxon_constraint": [924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972], "excluderedund": 925, "includeredund": 925, "includeneverinifredundantwithonlyin": 925, "excludeneverinifredundantwithonlyin": 925, "tc": [939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 961, 963, 964, 965, 966, 967, 971, 972], "come": [942, 956, 1103, 1108, 1109, 1120, 1135, 1137, 1143], "lead": [942, 956, 971, 1120], "cont": [942, 956], "only_in": [942, 944, 956], "state": [942, 956, 958, 959, 1120, 1170, 1185], "never_in": [942, 944, 956, 960], "present_in": [942, 944, 956], "present_in_ancestor_of": [942, 944, 956], "via_term": [942, 944, 956, 961], "contradict": [942, 971], "conflat": [942, 959], "0002160": [942, 959, 1134, 1170], "0002175": [942, 962], "taxonom": [943, 955, 956, 957], "higher": [943, 955, 956, 957, 1132, 1166, 1196], "ncbitaxon_union": 943, "subjectterm": [944, 945, 953, 955, 956, 957, 958, 959, 962, 963, 968, 971, 972], "predicateterm": [944, 945, 955, 956, 957, 960, 961], "evolutionari": [944, 956], "nev": [944, 956], "redundant_with_only_in": [944, 956], "redundant_with": [944, 956], "contradicted_bi": [944, 956], "conflict": [944, 952, 956], "taxo": [944, 956], "in_taxon": [944, 960], "configurationopt": 956, "ann": [981, 991, 992, 993, 994, 999, 1000, 1002, 1003, 1005, 1006, 1007, 1009, 1010, 1011, 1012, 1013, 1017, 1019, 1020, 1021, 1022, 1024, 1025, 1026, 1028], "subject_text_id": [981, 991, 994, 1004], "textualel": [981, 991, 1002, 1004, 1017, 1019, 1025, 1026], "textannot": [981, 992, 993, 994, 999, 1001, 1004, 1005, 1006, 1008, 1009, 1010, 1012, 1013, 1014, 1015, 1016, 1018, 1021, 1022, 1023, 1024, 1025, 1174, 1184], "bpa": [981, 991, 1014, 1015, 1021, 1022, 1024], "hasspan": [991, 994, 1004, 1021, 1022, 1023, 1024, 1025], "object_categori": [991, 1004], "match_str": [991, 1004, 1132], "is_longest_match": [991, 1004, 1132], "matches_whole_text": [991, 992, 1004, 1132], "match_typ": [991, 1004, 1132], "textannotationresultset": [991, 999, 1004], "annotatedclass": [991, 1014, 1015], "textannotationconfigur": [991, 1000, 1003, 1004, 1007, 1010, 1011, 1020, 1028, 1184], "token_exclusion_list": [992, 1004], "include_alias": [992, 1004], "grounding_mod": 992, "source_text": [994, 1004], "parent_docu": [994, 1004], "upon": [1004, 1027, 1122, 1132, 1169], "tr": [1004, 1027, 1170], "validation_result": [1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1101], "vm": [1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1058, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1072, 1073, 1074, 1075, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1086, 1088, 1090, 1091, 1092, 1093, 1094, 1095, 1097, 1099, 1100], "namedresourc": [1031, 1046, 1069, 1070], "validationresult": [1031, 1038, 1043, 1046, 1050, 1053, 1058, 1062, 1070, 1071, 1072, 1076, 1079, 1080, 1084, 1087, 1088, 1089, 1096, 1185], "externalreferencevalidationresult": [1031, 1046, 1063, 1068, 1070, 1071, 1072, 1075, 1076, 1079, 1080, 1087, 1088, 1089, 1095, 1096, 1099], "time_check": [1038, 1070], "number_of_attempt": [1038, 1070], "http_response_cod": [1038, 1070], "constraintcompon": [1038, 1044, 1063, 1069, 1070, 1096], "sever": [1038, 1054, 1058, 1061, 1063, 1070, 1096, 1097, 1111, 1127], "severityopt": [1038, 1058, 1063, 1070, 1087], "object_str": [1038, 1063, 1070], "sourceconstraintcompon": [1038, 1063, 1096], "typeseveritykeyvalu": [1038, 1061, 1063, 1070, 1087, 1096, 1097], "resultsever": [1038, 1063, 1087], "severity_opt": [1038, 1054, 1058, 1063, 1087], "focusnod": [1038, 1063, 1089], "sourceshap": [1038, 1063, 1072], "related_map": [1038, 1063, 1080], "resultpath": [1038, 1063, 1080], "resultmessag": [1038, 1063, 1071], "mappingvalidationresult": [1038, 1050, 1053, 1063, 1065, 1066, 1070, 1071, 1077, 1078, 1081, 1082, 1090, 1091, 1093, 1094, 1185], "repairoper": [1038, 1043, 1051, 1053, 1063, 1070, 1071, 1074, 1084, 1092, 1185], "correct": [1043, 1065, 1066, 1070, 1071, 1077, 1078, 1081, 1082, 1090, 1091, 1093, 1094, 1103, 1118], "subject_info": [1043, 1070], "object_info": [1043, 1070], "suggested_pred": [1043, 1070], "suggested_modif": [1043, 1070], "repair": [1049, 1050, 1051, 1063, 1067, 1070, 1071, 1074, 1085, 1092, 1100, 1174, 1185], "validation_configur": [1049, 1061, 1070], "validationconfigur": [1049, 1058, 1070, 1073, 1083, 1086, 1097, 1100, 1185], "dry_run": [1049, 1070, 1185], "repairreport": [1050, 1052, 1070, 1085], "integr": [1050, 1109, 1132, 1151], "abl": [1050, 1110, 1112, 1121, 1180], "holder": [1052, 1070, 1085], "validationreport": [1052, 1063, 1070, 1085], "fatal": 1054, "violat": [1054, 1185], "warn": 1054, "type_severity_map": [1058, 1061, 1070], "conforms_to": 1058, "q4818718": 1058, "max_number_results_per_typ": [1061, 1070], "truncat": [1061, 1070, 1073, 1132], "schema_path": [1061, 1070], "prompt_info": [1061, 1070], "ai": [1061, 1070, 1083, 1109], "prompt": [1061, 1070, 1083], "repairconfigur": [1061, 1067, 1070, 1100, 1185], "aris": [1063, 1070, 1071, 1072, 1076, 1079, 1080, 1087, 1088, 1089, 1096], "datatypeconstraintcompon": [1064, 1127], "mincountconstraintcompon": [1064, 1127], "spe": 1064, "maxcountconstraintcompon": [1064, 1127], "deprecatedpropertycompon": [1064, 1127], "maxlengthconstraintcompon": 1064, "minlengthconstraintcompon": 1064, "patternconstraintcompon": 1064, "closedconstraintcompon": [1064, 1127], "ruleconstraintcompon": 1064, "validaton": 1070, "validationresulttyp": 1070, "parti": [1071, 1072, 1076, 1079, 1080, 1087, 1088, 1089, 1096], "focu": [1102, 1109, 1138, 1143], "code": [1102, 1104, 1105, 1109, 1119, 1122, 1126, 1129, 1131, 1134, 1136, 1140, 1143, 1144, 1146, 1148, 1155, 1163, 1170, 1174, 1186], "talk": [1102, 1105, 1133, 1176, 1184], "get_adapt": [1102, 1110, 1113, 1117, 1118, 1119, 1120, 1126, 1129, 1133, 1134, 1140, 1143, 1144, 1151, 1157, 1159, 1161, 1162, 1163, 1166, 1167, 1169, 1170, 1171, 1172, 1174, 1175, 1176, 1180, 1184, 1186], "0011103": 1102, "sympathet": 1102, "underli": [1102, 1118, 1120, 1138], "basic_ontology_imerfac": 1102, "doesn": [1102, 1112, 1113, 1116, 1120, 1121, 1132, 1161, 1196], "task": [1102, 1105, 1107, 1109, 1110, 1112, 1126], "often": [1102, 1105, 1109, 1110, 1112, 1116], "coupl": 1102, "notat": 1102, "sssom_map": [1102, 1117, 1174, 1175], "0005886": [1102, 1175], "cell_membran": [1102, 1175], "scalabl": 1102, "amen": 1102, "runoak": [1103, 1105, 1107, 1108, 1110, 1111, 1112, 1113, 1116, 1117, 1118, 1120, 1121, 1122, 1126, 1127, 1129, 1132, 1136, 1138, 1139, 1140, 1146, 1148, 1151, 1152, 1154, 1156, 1157, 1159, 1161, 1162, 1163, 1164, 1167, 1169, 1175, 1180, 1196], "global": 1103, "jupyt": [1103, 1105, 1130], "directori": [1103, 1132, 1142, 1162], "our": [1103, 1107, 1120, 1186], "eventu": 1103, "repositori": [1103, 1107, 1109, 1132, 1138, 1140, 1166, 1176], "easiest": [1103, 1127], "myontid": 1103, "chebi": [1103, 1118, 1132, 1134, 1143], "cystein": [1103, 1132], "almost": 1103, "disjunct": 1103, "handi": 1103, "memor": 1103, "devic": 1103, "l": [1103, 1132, 1163, 1180, 1197], "pameter": 1103, "bone": 1103, "forelimb": [1103, 1120], "pipe": 1103, "interneuron": [1103, 1132, 1133], "next": [1103, 1126, 1131, 1133], "0002405": 1103, "0002039": 1103, "0000893": 1103, "0001042": 1103, "0000935": 1103, "chainabl": 1103, "slack": [1103, 1104], "channel": [1103, 1104], "copi": [1103, 1108, 1118, 1126, 1163, 1178], "idea": [1104, 1126], "improv": [1104, 1108, 1132], "stylist": 1104, "suggest": [1104, 1123], "free": [1104, 1127, 1133], "repo": [1104, 1105, 1127, 1142], "workspac": 1104, "join": [1104, 1110], "technic": 1105, "site": [1105, 1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "academi": [1105, 1112, 1115], "command": [1105, 1107, 1109, 1110, 1111, 1112, 1113, 1114, 1116, 1117, 1118, 1120, 1121, 1122, 1126, 1130, 1131, 1138, 1148, 1155, 1157, 1162, 1164, 1168, 1178, 1186, 1196], "line": [1105, 1107, 1109, 1110, 1111, 1112, 1113, 1114, 1118, 1120, 1126, 1130, 1131, 1132, 1148, 1155, 1168, 1184, 1186, 1196], "5281": 1105, "zenodo": 1105, "7708963": 1105, "monarch": [1105, 1109], "video": 1105, "throughout": 1105, "chosen": 1105, "mirror": 1105, "companion": 1105, "odk": [1105, 1138], "homag": 1105, "oakland": 1105, "onc": [1105, 1138, 1196, 1197], "consult": [1105, 1129, 1138], "ontoport": [1105, 1109, 1131, 1152, 1184], "speak": 1105, "allianc": [1105, 1132], "expens": 1105, "excel": 1105, "bank": 1105, "brown": 1105, "fox": 1105, "synchron": 1105, "addition": [1105, 1119, 1120, 1134, 1186], "capabl": [1105, 1108, 1126, 1134, 1140, 1173], "particularli": [1105, 1120], "simpleobo_implement": 1105, "fast": [1105, 1108, 1122], "rigor": 1105, "major": 1105, "blocker": 1105, "maintain": 1105, "small": [1105, 1112, 1143, 1163], "consum": [1105, 1116], "compil": [1105, 1163], "sqlite3": [1105, 1108, 1131, 1186], "sparql_implement": [1105, 1165], "wider": [1105, 1132], "abil": [1105, 1107, 1126], "plan": [1105, 1143, 1166], "rust": [1105, 1121], "whelk": 1105, "viz": [1105, 1112, 1120, 1132, 1135, 1136], "variant": [1105, 1112], "runnabl": 1106, "am": 1106, "familiar": [1106, 1133], "me": [1106, 1126], "why": [1106, 1111, 1114, 1120, 1143], "bio": [1106, 1107, 1109, 1110, 1111, 1120], "portal": [1106, 1143], "matport": 1106, "triplestor": [1106, 1109, 1119, 1130, 1131, 1132, 1139], "chatgpt": [1106, 1126], "stai": 1106, "troubleshoot": [1106, 1130], "messag": 1106, "won": 1106, "long": [1106, 1121, 1143], "cach": [1106, 1132, 1138, 1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1170, 1176, 1177, 1184], "fine": [1107, 1119, 1143, 1144], "tune": [1107, 1167], "impress": 1107, "pure": [1107, 1118, 1121, 1174], "answer": [1107, 1111, 1126, 1143], "good": [1107, 1116, 1118, 1169, 1180], "interest": [1107, 1116, 1121, 1161], "fusion": 1107, "research": 1107, "ontogpt": [1107, 1109, 1123, 1184], "project": [1107, 1109, 1120, 1122, 1123, 1131, 1166, 1185], "theoret": [1107, 1135], "easili": 1107, "0000084": [1107, 1140], "lymphocyt": [1107, 1140], "immatur": 1107, "matur": 1107, "becaus": [1108, 1109, 1116, 1118, 1119, 1122, 1132, 1170, 1196], "ont": [1108, 1113, 1119, 1126, 1134, 1148, 1170, 1196], "lexmatch": [1108, 1117], "guidanc": 1108, "rdflib": [1108, 1137, 1159, 1160, 1165, 1167, 1186], "sparql_adapt": 1108, "known": [1108, 1109, 1112, 1113, 1116, 1120, 1121, 1155, 1169, 1170], "sql_adapt": 1108, "made": [1108, 1118, 1127, 1131, 1186, 1196], "manag": [1108, 1109, 1113, 1126, 1133, 1135, 1184, 1187], "purg": 1108, "stale": 1108, "rm": [1108, 1138], "necessari": [1108, 1112, 1118, 1120, 1132, 1144], "gz": [1108, 1138], "strive": 1108, "fill": 1108, "feedback": 1108, "deeper": 1109, "dive": 1109, "discret": 1109, "artefact": [1109, 1143], "0000948": [1109, 1113, 1119], "technologi": 1109, "uniform": [1109, 1111, 1134, 1196], "peopl": [1109, 1121, 1129, 1132, 1186], "usual": [1109, 1111], "literatur": 1109, "learn": [1109, 1114, 1129, 1130, 1132, 1133, 1154], "neo4j": 1109, "upper": [1109, 1120], "seen": [1109, 1116, 1120, 1132], "nuanc": 1109, "despit": 1109, "terminologi": [1109, 1110, 1112], "confusingli": 1109, "curat": [1109, 1112, 1114, 1130, 1132, 1169], "conceptu": 1109, "due": [1109, 1129, 1132], "emploi": 1109, "numer": [1109, 1113, 1140, 1161, 1166], "obscur": 1109, "finger": [1109, 1116, 1126, 1135, 1176], "vertex": 1109, "scoliosi": 1109, "vertebr": 1109, "overload": 1109, "programmat": [1109, 1126, 1129, 1131, 1132], "counterpart": [1109, 1116], "Of": 1109, "reachabl": 1109, "convers": [1109, 1123, 1130], "mucopolysaccharidosi": 1109, "lysosom": 1109, "storag": 1109, "singleton": [1109, 1170, 1174], "musculoskelet": 1109, "behind": [1109, 1134, 1143], "scene": [1109, 1134, 1143], "obook": [1109, 1112, 1115], "harold": 1109, "solbrig": 1109, "easi": [1109, 1121, 1126, 1139, 1196], "popular": [1109, 1122, 1188], "outsid": [1109, 1111, 1117, 1120, 1127, 1132, 1136, 1138], "genom": 1109, "sphere": 1109, "althono": 1109, "primer": [1109, 1115, 1170], "john": 1109, "characterist": [1109, 1116, 1120, 1121, 1140, 1170, 1177], "silent": 1109, "coher": [1109, 1129, 1174, 1185], "comprehens": [1109, 1132], "expos": [1109, 1117, 1170], "bioontologi": [1109, 1132], "framework": [1109, 1112, 1123], "agroport": 1109, "ecoport": 1109, "oppos": 1109, "isn": [1109, 1120], "tautologi": [1109, 1170], "strategi": [1109, 1114, 1182, 1184], "oborel": 1109, "ebi": [1109, 1158], "ac": 1109, "uk": 1109, "awai": [1109, 1138, 1174], "while": [1109, 1119, 1139, 1169], "measur": [1109, 1114, 1170, 1181], "wherea": [1109, 1111], "log2": [1109, 1181], "taken": [1109, 1111], "account": [1109, 1121, 1132], "observ": 1109, "realpython": 1109, "regardless": [1109, 1118, 1133, 1138, 1140, 1144], "worldview": 1109, "distinguish": [1110, 1161], "reflect": 1110, "occasion": 1110, "urea": 1110, "cycl": 1110, "ornithin": 1110, "biosynthesi": 1110, "boost": 1110, "below": 1110, "reli": [1110, 1169], "phrase": 1110, "pten": 1110, "risk": 1110, "breast": 1110, "cancer": 1110, "malign": 1110, "neoplasm": 1110, "funk": 1110, "2016": 1110, "neutral": [1110, 1180], "priorit": 1110, "manu": [1110, 1120, 1180], "scientif": 1110, "medic": 1110, "favor": [1110, 1133, 1135, 1183], "layperson": 1110, "vasilevski": 1110, "diagnosi": 1110, "70": 1110, "sweet": 1110, "mint": 1110, "variat": 1110, "area": 1110, "consensu": 1110, "english": [1110, 1119, 1170], "untyp": 1110, "entity_alias": [1110, 1170, 1174], "0001698": 1110, "fluid": 1110, "pericardi": 1110, "effus": 1110, "simplist": [1110, 1170], "alias_relationship": 1110, "exclude_label": 1110, "tabl": [1110, 1113, 1121, 1132, 1166, 1185], "obograph_datamodel": 1110, "spv": 1110, "synonym_property_valu": 1110, "0000": 1110, "0002": 1110, "6548": 1110, "5200": 1110, "ag": 1111, "onset": 1111, "challeng": [1111, 1134], "administr": 1111, "constitut": 1111, "pragmat": 1111, "emphas": 1111, "invari": 1111, "conting": 1111, "treatment": 1111, "beyond": [1111, 1170, 1196], "gruber": 1111, "todai": 1111, "biomed": [1111, 1132, 1154], "minimalist": 1111, "supplement": 1111, "lacrim": 1111, "gland": [1111, 1151], "morphologi": [1111, 1120, 1148], "wget": [1111, 1113, 1127, 1132, 1138], "0011482": 1111, "unif": 1111, "biologi": 1111, "inclus": 1112, "quickstart": 1112, "intro": 1112, "environment": 1112, "glacier": 1112, "lake": 1112, "ocean": 1112, "hierarch": [1112, 1132, 1170], "articl": 1112, "shown": 1112, "drawn": 1112, "patient": [1112, 1186], "rich": 1112, "introduct": [1112, 1114, 1130, 1131], "book": [1112, 1115], "xml": [1112, 1138, 1162, 1186], "manchest": [1112, 1186], "thesauri": 1112, "clinic": [1112, 1121], "rrf": 1112, "lightweight": [1112, 1133], "0005671": 1112, "bilater": 1112, "intracerebr": 1112, "calcif": 1112, "0005676": 1112, "rudimentari": 1112, "postaxi": 1112, "polydactyli": 1112, "0005678": 1112, "anterior": [1112, 1120], "atlanto": 1112, "occipit": 1112, "disloc": 1112, "oboacademi": 1112, "themselv": [1112, 1121, 1143, 1169, 1181], "compress": [1113, 1148, 1170], "uberon_0000948": 1113, "foundri": [1113, 1119, 1134, 1159, 1170], "under": [1113, 1117, 1121, 1132, 1166], "hood": [1113, 1117, 1166], "similarli": 1113, "curie_to_uri": [1113, 1170, 1174], "po": 1113, "po_": 1113, "poro": 1113, "poro_": 1113, "2002": 1113, "07": [1113, 1144], "2004": 1113, "02": 1113, "suffic": 1113, "soil_oi": 1113, "soil": [1113, 1119], "nt": [1113, 1119], "prefix_map": [1113, 1119, 1170, 1174], "soilprofil": [1113, 1119], "anzsoil": [1113, 1119], "def": [1113, 1119, 1132, 1133], "au": [1113, 1119], "asl": [1113, 1119], "uppercas": 1113, "pad": 1113, "7": [1113, 1130, 1131, 1175], "digit": [1113, 1116, 1134, 1180], "latest": 1113, "schemaorg": 1113, "explan": 1114, "nlp": 1114, "signatur": [1114, 1169, 1177, 1196], "accompani": [1114, 1196], "vector": 1114, "overview": [1116, 1132], "realli": 1116, "browser": [1116, 1136], "fingernail": 1116, "uberon_0009565": 1116, "dedic": 1116, "parthood": 1116, "autom": 1116, "amount": [1116, 1122, 1144, 1148], "deal": 1116, "mistak": 1116, "0009565": 1116, "0001705": 1116, "0002389": 1116, "definedclassid_label": 1116, "genusids_label": 1116, "restrictionspropertyid": 1116, "restrictionspropertyids_label": 1116, "restrictionsfillerid": 1116, "restrictionsfillerids_label": 1116, "0009567": 1116, "pedal": 1116, "0001466": 1116, "0011273": 1116, "0001463": 1116, "0011274": 1116, "0003622": 1116, "0011275": 1116, "0003623": 1116, "0011276": 1116, "0003624": 1116, "0011277": 1116, "0003625": 1116, "0011278": 1116, "0003631": 1116, "0011279": 1116, "0003632": 1116, "0011280": 1116, "0003633": 1116, "0011281": 1116, "0003634": 1116, "0011282": 1116, "0003635": 1116, "matrix": 1116, "intersection_of": 1116, "ahead": [1116, 1120], "prone": 1116, "templat": [1116, 1155, 1168], "dosdp": 1116, "ottr": 1116, "experienc": [1116, 1133], "aid": 1116, "creation": [1116, 1175], "saw": [1116, 1132], "At": [1116, 1132, 1143], "lattic": 1116, "brain": [1117, 1152, 1163], "0000008": 1117, "mapping_justif": 1117, "semapv": 1117, "unspecifiedmatch": 1117, "hba": 1117, "4005": 1117, "0000168": 1117, "mat": 1117, "0000098": 1117, "caloha": 1117, "0095": 1117, "dhba": 1117, "10155": 1117, "efo": 1117, "0000302": 1117, "interchang": [1118, 1196], "longer": 1118, "discov": 1118, "fairli": [1118, 1120, 1134, 1196], "myo": [1118, 1196], "123456": [1118, 1196], "is_obsolet": [1118, 1196], "0040180": 1118, "hyperkeratosi": 1118, "pilari": 1118, "0040193": 1118, "pinealoblastoma": 1118, "0040199": 1118, "midfac": 1118, "older": [1118, 1196], "obsoleteclass": [1118, 1196], "evalu": [1118, 1196], "entity_metadata": [1118, 1196], "0000005": [1118, 1196], "assist": 1118, "assembli": 1118, "ribosom": 1118, "subunit": 1118, "vivo": 1118, "assembl": 1118, "0042254": 1118, "0044183": 1118, "0051082": 1118, "chaperon": 1118, "molecular_funct": [1118, 1126, 1156, 1170], "molecular": 1118, "mondo": [1118, 1169, 1170], "extrem": [1118, 1119], "lost": 1118, "alt_id": [1118, 1170], "x1": 1118, "0000227": 1118, "stanza": [1118, 1170], "nodeobsolet": 1118, "guarante": [1119, 1162, 1172, 1196], "ontologymetadatamapp": [1119, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "vocab": 1119, "curie_convert": [1119, 1145, 1146, 1147, 1148, 1149], "use_skos_profil": 1119, "ontology_metamodel_mapp": [1119, 1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "void": 1119, "crack": 1119, "medium": 1119, "coars": 1119, "happen": 1119, "infrequ": 1119, "interer": 1119, "idiom": 1120, "perhap": 1120, "surprisingli": 1120, "heavili": 1120, "pe": 1120, "0002387": 1120, "0002103": 1120, "0006871": 1120, "0002551": 1120, "0001445": 1120, "0002470": 1120, "0008784": 1120, "0002102": 1120, "0006875": 1120, "0001442": 1120, "0008785": 1120, "hindlimb": 1120, "embryon": 1120, "footplat": 1120, "skeleton": 1120, "autopod": [1120, 1134], "region": [1120, 1163], "segment": 1120, "handplat": 1120, "triad": 1120, "0000002": 1120, "continu": [1120, 1132], "0000004": 1120, "0000040": 1120, "materi": [1120, 1132], "0000026": 1120, "appendag": [1120, 1132], "0000061": 1120, "anatom": [1120, 1132, 1170], "0000153": 1120, "bodi": [1120, 1132, 1169], "0000465": 1120, "0000468": 1120, "multicellular": 1120, "0000475": 1120, "subdivis": [1120, 1134], "0001062": [1120, 1134], "0002101": [1120, 1152, 1169, 1175], "deduct": [1120, 1185], "tell": 1120, "hope": [1120, 1138], "furthermor": 1120, "meaningless": 1120, "concret": 1120, "0012505": [1120, 1170], "endomembran": [1120, 1170], "0110165": [1120, 1170], "cellular": [1120, 1170], "has_part": [1120, 1170], "0043231": [1120, 1162, 1170, 1176], "intracellular": [1120, 1162, 1170], "bound": [1120, 1162, 1170], "organel": [1120, 1157, 1162, 1170, 1184], "0043227": 1120, "0043226": [1120, 1157, 1184], "0043229": 1120, "typedef": 1120, "0000051": [1120, 1170], "inverse_of": 1120, "0002131": 1120, "holds_over_chain": 1120, "simplifi": [1120, 1143, 1170, 1186], "demo": [1120, 1133], "len": [1120, 1171, 1176], "obograph_interfac": [1120, 1176], "graphtraversalmethod": [1120, 1176], "advantag": [1120, 1132, 1139, 1144], "include_entail": [1120, 1134, 1170, 1183], "_e": 1120, "target_curi": [1120, 1176], "liquid": 1120, "0001735": 1120, "hop_anc": 1120, "ent_anc": 1120, "9": [1120, 1132, 1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "recal": 1120, "mislead": 1120, "has_part_with_characterist": 1120, "odd": 1120, "imagin": 1120, "charg": 1120, "anticip": 1120, "care": [1120, 1143], "topic": 1120, "reader": 1120, "who": 1120, "wonder": 1120, "mention": 1120, "mesentericvein": 1120, "drain": 1120, "smallintestin": 1120, "vein": [1120, 1132, 1136], "closer": 1121, "music": 1121, "genr": 1121, "favorit": 1121, "newer": 1121, "theori": [1121, 1138, 1143], "j": 1121, "frac": 1121, "cap": 1121, "cup": 1121, "choic": [1121, 1169], "partof": 1121, "indirectli": 1121, "resnik": 1121, "kg": 1121, "leaf": [1121, 1170, 1174], "bia": 1121, "e1": 1121, "e2": 1121, "goal": [1121, 1127, 1185, 1196], "simplest": 1121, "max_": 1121, "t1": 1121, "t2": 1121, "averag": 1121, "bma": 1121, "sum_": 1121, "termset": 1121, "0010771": 1121, "0002169": 1121, "0005391": 1121, "0005389": 1121, "0005367": 1121, "substitut": 1121, "formul": [1121, 1170, 1179], "hot": 1121, "bit": [1121, 1132], "cosin": 1121, "numpi": 1121, "effici": [1121, 1132, 1138, 1185], "reduc": 1121, "dimension": 1121, "grape": 1121, "ml": 1121, "curategpt": [1121, 1123], "lord": 1121, "pubm": 1121, "nlm": 1121, "nih": 1121, "gov": 1121, "12603061": 1121, "koehler": 1121, "genet": 1121, "19800049": 1121, "healthcar": 1122, "interoper": 1122, "exchang": [1122, 1169], "codesystem": [1122, 1148, 1149], "agre": [1122, 1169], "server": [1122, 1126, 1144, 1148, 1159], "dump": [1122, 1145, 1146, 1147, 1148, 1149, 1172, 1173, 1174], "fhir_config_exampl": 1122, "code_system_id": [1122, 1148], "_the": 1122, "identif": [1122, 1148], "hl7": [1122, 1148], "code_system_url": [1122, 1148], "_canon": 1122, "native_uri_stem": [1122, 1148], "_a": 1122, "omim": [1122, 1148], "phenotypicseri": [1122, 1148], "include_all_pred": [1122, 1148], "maxim": [1122, 1148], "use_curies_native_concept": [1122, 1148], "_fhir": [1122, 1148], "convention": [1122, 1148], "use_curies_foreign_concept": [1122, 1148], "_typic": 1122, "predicate_period_replac": [1122, 1148], "_predic": 1122, "hapi": [1122, 1148], "caus": [1122, 1148], "underscor": [1122, 1129, 1148], "hp_": 1122, "obtain": [1123, 1176], "caveat": 1123, "discuss": 1123, "pypi": [1123, 1131], "talisman": 1123, "conjunct": 1123, "mixtral": 1123, "ollama": 1123, "litellm": 1123, "groq": 1123, "leverag": [1126, 1177, 1184], "extract": [1126, 1176, 1182, 1184], "autosuggest": 1126, "window": 1126, "datasett": 1126, "pipx": 1126, "inject": 1126, "proxi": [1126, 1170], "unpredict": 1126, "ey": [1126, 1156], "toe": 1126, "gpt": 1126, "jsonl": 1126, "turbo": 1126, "awesom": [1126, 1129], "gemini": 1126, "pro": [1126, 1140, 1143], "cd": [1126, 1132, 1133], "openai": 1126, "stabl": 1126, "model_nam": 1126, "model_id": 1126, "api_bas": 1126, "8000": 1126, "soup": 1126, "hardwar": 1126, "llama2": 1126, "bash": 1126, "8x7b": 1126, "32768": 1126, "yourself": 1127, "bucket": 1127, "amazonaw": [1127, 1138], "bbop": [1127, 1138], "pip": [1127, 1129, 1132], "caro": 1127, "0000003": [1127, 1170], "0000006": 1127, "validatorinterfac": [1127, 1174, 1185], "sqldatabas": [1127, 1166, 1177, 1185], "cmungal": 1127, "plug": [1129, 1132], "ins": 1129, "enabl": [1129, 1163], "nltk": 1129, "wouldn": 1129, "drop": 1129, "my_awesome_plugin": 1129, "unsat": 1129, "get_resource_from_shorthand": [1129, 1186], "discovered_plugin": 1129, "oakx_robot": 1129, "robot_implement": 1129, "robotimplement": 1129, "owl_noth": 1129, "oi": [1129, 1157, 1159], "is_coher": [1129, 1174, 1185], "congratul": 1129, "els": [1129, 1138], "usatisfi": 1129, "unsatisfiable_class": [1129, 1174, 1185], "someon": 1129, "rememb": 1129, "pollut": 1129, "pyproject": 1129, "toml": 1129, "setuptool": 1129, "6": [1130, 1131], "glossari": 1130, "faq": 1130, "graphviz": 1131, "docker": 1131, "rdbmss": 1131, "drosophila": 1132, "fruit": 1132, "fly": [1132, 1175], "mkdir": 1132, "virtual": 1132, "python3": [1132, 1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "venv": 1132, "bin": 1132, "pythonpath": 1132, "invok": [1132, 1136], "wing": [1132, 1136], "00004751": [1132, 1136], "shorter": 1132, "sound": 1132, "introduc": [1132, 1135], "00004754": 1132, "axillari": 1132, "00004759": 1132, "l1": 1132, "00004760": 1132, "l2": 1132, "00046009": 1132, "presumpt": 1132, "00046030": 1132, "00046031": 1132, "l3": 1132, "00004761": 1132, "00004762": 1132, "l4": 1132, "00004763": 1132, "l5": 1132, "00004764": 1132, "l6": 1132, "filenam": 1132, "got": 1132, "cuticl": 1132, "00004729": 1132, "00007000": 1132, "effect": 1132, "visit": [1132, 1138, 1170], "00007245": 1132, "cuticular": 1132, "00006015": 1132, "blade": 1132, "00007010": 1132, "tissu": 1132, "00004551": 1132, "thorax": 1132, "10000000": 1132, "00007016": 1132, "00007001": 1132, "00007013": 1132, "acellular": 1132, "unbound": 1132, "tempt": 1132, "partonomi": 1132, "sinc": [1132, 1170, 1175, 1186], "00047212": 1132, "longitudin": 1132, "brief": 1132, "referenti": 1132, "blazegraph": 1132, "tradeoff": 1132, "obviou": 1132, "15356": 1132, "sulfur": 1132, "amino": 1132, "acid": 1132, "propano": 1132, "sulfanyl": 1132, "beilstein": 1132, "1721406": 1132, "ca": [1132, 1181], "3374": 1132, "22": [1132, 1176], "33704": 1132, "alpha": [1132, 1139], "26167": 1132, "polar": 1132, "26834": 1132, "isa": [1132, 1170], "life": 1132, "apikei": [1132, 1152], "kill": 1132, "rout": 1132, "forebrain": 1132, "0000099": 1132, "pref": 1132, "11": [1132, 1184], "0001890": 1132, "16": 1132, "24": 1132, "breadth": 1132, "offer": [1132, 1139], "mapping_provid": 1132, "25181601": 1132, "unspecifi": 1132, "cdno": 1132, "17439666": 1132, "kegg": 1132, "c00736": 1132, "knapsack": 1132, "c00007323": 1132, "zp": 1132, "feel": 1133, "advis": 1133, "stick": 1133, "adaptor": 1133, "connector": 1133, "my_oak_demo": 1133, "4023017": 1133, "sst": 1133, "gabaerg": 1133, "cortic": 1133, "cerebr": 1133, "cortex": [1133, 1154], "somatostatin": 1133, "outgo": [1133, 1170], "0002292": 1133, "000015665": 1133, "0010011": 1133, "show_info": 1133, "term_id": [1133, 1134], "outgoing_relationship": [1133, 1170, 1174], "queryabl": 1134, "lov": 1134, "bspo": 1134, "0002544": 1134, "32523": 1134, "0005881": 1134, "compos": 1135, "philosophi": 1135, "illustr": [1135, 1141], "obographinterfac": [1135, 1136, 1174, 1176], "dao": 1135, "smarter": 1135, "network": [1136, 1143, 1144], "javascript": 1136, "npm": 1136, "yarn": 1136, "preview": 1136, "temp": 1136, "immedi": 1136, "test_obograph_util": 1136, "until": 1137, "v0": 1137, "wait": [1137, 1144], "pull": 1137, "1686": 1137, "gzip": 1138, "enter": 1138, "center": [1138, 1176], "0007011": 1138, "0002005": 1138, "nervou": [1138, 1148], "0002100": 1138, "soma": 1138, "0002607": 1138, "migratori": 1138, "neural": 1138, "crest": 1138, "0000029": 1138, "0000107": 1138, "autonom": 1138, "suffix": [1138, 1167, 1186], "shape": [1138, 1185], "semsql": [1138, 1166], "pwd": 1138, "ti": 1138, "odkful": 1138, "recip": 1138, "prerequisit": 1138, "rdftab": [1138, 1166], "riot": 1138, "maco": 1138, "homebrew": 1138, "brew": 1138, "jena": 1138, "seamlessli": 1138, "rdbm": 1138, "tester": 1139, "fraction": 1139, "dsl": 1139, "optimis": 1139, "obsolete_class": 1139, "classobsolet": 1139, "queue": 1139, "deploi": 1139, "inapplic": 1139, "memori": [1139, 1143, 1144, 1157], "toolkit": 1140, "modif": 1140, "filesystem": [1140, 1166], "basic_search": [1140, 1151, 1174, 1180], "outgoing_relationship_map": [1140, 1170, 1174], "receptor": 1140, "0000827": 1140, "0002215": 1140, "0002456": 1140, "mediat": 1140, "0000542": 1140, "logo": 1141, "jmcmurri": 1141, "master": 1141, "mostli": 1143, "pictur": 1143, "client": [1143, 1152, 1158, 1161], "0001825": 1143, "paranas": 1143, "sinu": 1143, "great": 1143, "latenc": [1143, 1144], "burden": 1143, "dron": 1143, "80": [1143, 1170], "demand": 1143, "terminolog": 1143, "unlik": 1143, "scalar": [1143, 1170], "dict": [1143, 1147, 1157, 1158, 1162, 1164, 1166, 1169, 1170, 1172, 1175, 1176, 1178, 1181, 1183, 1184, 1185], "autocomplet": 1143, "robust": 1144, "hsapdv": 1144, "0000013": 1144, "0000014": [1144, 1170], "anti": 1144, "carnegi": 1144, "08": 1144, "ineffici": [1144, 1176], "sizeabl": 1144, "iterator_util": 1144, "curie_it": 1144, "slightli": 1144, "boilerpl": 1144, "consider": 1144, "test_click": 1144, "data_model_convert": 1145, "datamodelconvert": [1145, 1146], "callabl": [1145, 1147, 1148, 1149, 1180, 1184, 1197], "enforce_canonical_ord": [1145, 1146, 1147, 1148, 1149, 1173], "kwarg": [1145, 1147, 1148, 1149, 1166, 1169, 1170, 1172, 1173, 1175, 1176, 1178, 1180, 1181, 1184, 1186, 1197], "obograph_util": [1146, 1168], "load_obograph_docu": 1146, "graph_doc": 1146, "obographtofhirconvert": [1146, 1148], "obographtooboformatconvert": [1146, 1149], "as_bytes_io": [1146, 1149], "obo_graph_to_cx_convert": 1147, "obographtocxconvert": 1147, "obo_graph_to_fhir_convert": 1148, "concept_": 1148, "conceptproperty_": 1148, "direct_predicate_map": 1148, "conceptdesignation_": 1148, "coding_": 1148, "scope_map": 1148, "my_prefix": 1148, "my_expans": 1148, "codingsystem": 1148, "linkml_runtim": [1148, 1166, 1172], "dumper": [1148, 1168, 1172, 1174], "json_dump": 1148, "loader": 1148, "json_load": 1148, "hp_test": 1148, "target_class": 1148, "code_system": 1148, "0012639": 1148, "anomali": [1148, 1170], "obo_graph_to_obo_format_convert": 1149, "use_shorthand": 1149, "bytesio": 1149, "obodocu": [1149, 1164], "aggregator_implement": 1151, "aggregatorimplement": [1151, 1155], "ontologyresourc": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185, 1186], "_multilingu": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "factori": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "exclude_owl_top_and_bottom": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "ontology_metadata_mapp": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "_convert": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "auto_relax_axiom": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "cache_lookup": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "property_cach": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "keyval_cach": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "keyvalcach": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "_edge_index": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "edge_index": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "edgeindex": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "_entailed_edge_index": [1151, 1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167, 1169, 1170, 1171, 1172, 1173, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1182, 1183, 1184, 1185], "farm": 1151, "weav": 1151, "cfg": [1151, 1180, 1197], "agg": 1151, "parathyroid": 1151, "0000860": 1151, "hypoplasia": 1151, "0000680": 1151, "tentacl": 1152, "multiword": 1152, "octopu": 1152, "crucial": 1152, "funowl_implement": 1153, "funowlimplement": 1153, "functional_writ": [1153, 1160, 1162, 1164, 1166, 1177], "writer": [1153, 1160, 1162, 1164, 1166, 1177], "functionalwrit": [1153, 1160, 1162, 1164, 1166, 1177], "home": [1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "runner": [1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "pypoetri": [1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "virtualenv": [1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "5bvmowl": [1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "py3": [1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "lib": [1153, 1159, 1160, 1162, 1164, 1165, 1166, 1167, 1177], "ontology_docu": 1153, "ontologydocu": 1153, "_kwarg": [1153, 1154, 1157, 1158, 1159, 1160, 1161, 1162, 1164, 1165, 1166, 1167], "hsolbrig": 1153, "gildaimplement": [1154, 1155], "grounder": 1154, "gyori2021": 1154, "benjamin": 1154, "gyori": 1154, "charl": 1154, "taplei": 1154, "hoyt": 1154, "albert": 1154, "steppi": 1154, "2021": 1154, "disambigu": 1154, "volum": 1154, "vbac034": 1154, "prontoimplement": [1155, 1162], "sqlimplement": [1155, 1166, 1186], "alchemi": 1155, "olsimplement": [1155, 1158], "simpleoboimplement": [1155, 1164], "obographimplement": [1155, 1157], "sparqlimplement": [1155, 1165, 1167], "ubergraphimplement": [1155, 1167], "relationgraphenum": [1155, 1167], "ontobeeimplement": [1155, 1159], "pantherdb": [1155, 1168], "pantherdbimplement": [1155, 1161], "use_llm": 1156, "mappergpt": 1156, "rhea": 1156, "obograph_implement": [1157, 1162], "obograph_docu": 1157, "_relationship_index_cach": [1157, 1162, 1164], "node_id": 1157, "embl": 1158, "oxo": 1158, "ols_implement": 1158, "label_cach": 1158, "_prefix_map": [1158, 1166], "focus_ontologi": 1158, "ontobee_implement": 1159, "sparql_wrapp": [1159, 1160, 1165, 1167], "sparqlwrapp": [1159, 1160, 1165, 1167], "_list_of_named_graph": [1159, 1160, 1165, 1167], "Or": [1159, 1162, 1163, 1170, 1196], "vaccin": 1159, "vo": 1159, "uncom": 1159, "owlery_implement": 1160, "owleryimplement": 1160, "phenoscap": 1160, "uniprotkb": [1161, 1175], "p04217": 1161, "pantherdb_implement": 1161, "_association_index": [1161, 1162, 1165, 1166, 1169, 1171], "association_index": [1161, 1162, 1165, 1166, 1169, 1171], "associationindex": [1161, 1162, 1165, 1166, 1169, 1171], "association_provider_interfac": [1161, 1162, 1165, 1166, 1169, 1171], "entitynorm": [1161, 1162, 1165, 1166, 1169, 1171], "_requests_sess": 1161, "requests_cach": 1161, "session": 1161, "cachedsess": 1161, "taxon_id": 1161, "use_protein_id": 1161, "assoc": [1161, 1169, 1171], "0005576": 1161, "pronto_implement": 1162, "wrapped_ontologi": 1162, "_alt_id_to_replacement_map": [1162, 1164], "slug": [1162, 1186], "fastobo": 1162, "tabularinterfac": 1163, "drive": 1163, "biobank": 1163, "specimen": 1163, "robottempl": 1163, "templatestempl": 1163, "facilit": 1163, "0002516": [1163, 1170], "0003357": 1163, "atla": 1163, "new_templ": 1163, "simple_obo_implement": 1164, "obo_docu": 1164, "simple_obo_pars": 1164, "_uses_legacy_properti": 1164, "primarili": 1164, "abandon": 1164, "sqlitefil": 1166, "sqldb": 1166, "sql_implement": [1166, 1186], "engin": 1166, "_session": 1166, "_connect": 1166, "_ontology_metadata_model": 1166, "schemaview": 1166, "_information_content_cach": 1166, "_relationships_by_subject_index": 1166, "max_items_for_in_claus": 1166, "can_store_associ": 1166, "ontologyinterfac": [1166, 1170, 1173, 1186], "postgresql": 1166, "sqlalchemi": 1166, "classmethod": 1166, "sqla": 1166, "ever": 1166, "craft": 1166, "throttl": 1167, "overus": 1167, "larger": [1167, 1183], "hippocampu": [1167, 1184], "ubergraph_implement": 1167, "ug": 1167, "relationship_walk": 1168, "networkx_bridg": 1168, "slimmer_util": 1168, "apikey_manag": 1168, "associationproviderinterfac": [1169, 1174, 1186], "mpo": 1169, "gpad": 1169, "kgx": 1169, "augment": 1169, "inputspecif": [1169, 1186], "pombas": [1169, 1171], "amigo_implement": 1169, "10090": 1169, "mous": 1169, "property_filt": 1169, "subject_closure_pred": 1169, "predicate_closure_pred": 1169, "object_closure_pred": [1169, 1171, 1181], "include_modifi": 1169, "add_closure_field": 1169, "spac1142": [1169, 1171], "02c": [1169, 1171], "spac3h1": [1169, 1171], "06": [1169, 1171], "spac4g8": [1169, 1171], "0006620": [1169, 1171], "protein": [1169, 1171], "endoplasm": [1169, 1171], "reticulum": [1169, 1171], "sgt2": 1169, "associations_subject": [1169, 1174], "0045047": 1169, "spbc1271": 1169, "05c": 1169, "associations_subject_search": [1169, 1174], "subject_prefix": [1169, 1175], "include_similarity_object": 1169, "sort_by_similar": 1169, "semanticsimilarityinterfac": [1169, 1174, 1181], "association_pairwise_coassoci": [1169, 1174], "curies1": 1169, "curies2": 1169, "inputs_are_subject": 1169, "include_reciproc": 1169, "include_diagon": 1169, "include_ent": 1169, "0000910": 1169, "0006281": 1169, "0006412": 1169, "coassoc": 1169, "add_associ": [1169, 1174, 1186], "association_count": [1169, 1174], "association_subject_count": [1169, 1174], "num": 1169, "0051668": 1169, "map_associ": [1169, 1174], "subset_ent": 1169, "map2slim": 1169, "normalize_associ": [1169, 1174], "payload": [1170, 1184], "fit": [1170, 1196], "horsetail": 1170, "granular": 1170, "BE": 1170, "children": [1170, 1176], "rais": [1170, 1175, 1176, 1178], "transact": [1170, 1172, 1173, 1175, 1179, 1180, 1182, 1185], "commit": [1170, 1172, 1173, 1175, 1178, 1179, 1180, 1182, 1185], "default_prefix_map": 1170, "get_prefix_map": [1170, 1174], "go_0005634": 1170, "set_metamodel_map": [1170, 1174], "uri_to_curi": [1170, 1174], "use_uri_fallback": 1170, "entailed_edge_index": [1170, 1174], "default_languag": [1170, 1174], "null": 1170, "ontology_curi": [1170, 1174], "all_ontology_curi": [1170, 1174], "include_merg": 1170, "obsolesc": 1170, "obsoletes_migration_relationship": [1170, 1174], "all_obsolete_curi": [1170, 1174], "refus": 1170, "ontology_vers": [1170, 1174], "ontology_metadata_map": [1170, 1174], "filter_obsolet": 1170, "owl_object_properti": 1170, "metaclass": 1170, "all_entity_curi": [1170, 1174], "synonymtypeproperti": 1170, "owl2": 1170, "entity_declar": 1170, "pun": 1170, "defined_bi": [1170, 1174], "ignore_owl_th": 1170, "annotated_root": 1170, "0100026": 1170, "exhibit": 1170, "messi": 1170, "0003674": 1170, "0005575": 1170, "cellular_compon": 1170, "biological_process": 1170, "artifici": 1170, "ignore_owl_noth": 1170, "goslim_drosophila": 1170, "goslim_flybase_ribbon": 1170, "subset_curi": [1170, 1174], "all_subset_curi": [1170, 1174], "subset_memb": [1170, 1174], "0005635": 1170, "envelop": 1170, "terms_subset": [1170, 1174], "goslim_yeast": 1170, "goslim_chembl": 1170, "terms_categori": [1170, 1174], "curies_by_subset": [1170, 1174], "internation": 1170, "ph\u00e9notypiqu": 1170, "get_label_by_curi": [1170, 1174], "allow_non": 1170, "multilingual_label": [1170, 1174], "fenotypisch": 1170, "abnormaliteit": 1170, "get_labels_for_curi": [1170, 1174], "set_label": [1170, 1174], "curies_by_label": [1170, 1174], "circumst": 1170, "get_curies_by_label": [1170, 1174], "0016772": [1170, 1175], "31": 1170, "snip": 1170, "include_tbox": 1170, "include_abox": 1170, "exclude_blank": 1170, "incom": 1170, "relationships_metadata": [1170, 1174], "0009831": 1170, "c9005": 1170, "hierarchical_par": [1170, 1174], "isa_onli": 1170, "fresh": 1170, "invoc": [1170, 1184], "rp": [1170, 1179], "incoming_relationship_map": [1170, 1174], "ref": 1170, "incoming_relationship": [1170, 1174], "all_relationship": [1170, 1174], "defn": 1170, "include_metadata": [1170, 1176], "goc": 1170, "go_cur": 1170, "isbn": 1170, "0198547684": 1170, "include_miss": 1170, "get_definition_by_curi": [1170, 1174], "simple_mappings_by_curi": [1170, 1174], "sophist": 1170, "mappingproviderinterfac": [1170, 1174, 1175], "simple_map": [1170, 1174], "lump": 1170, "aliases_by_curi": [1170, 1174], "entity_alias_map": [1170, 1174], "deem": 1170, "alias_map_by_curi": [1170, 1174], "alias_map": 1170, "entity_metadata_map": [1170, 1174], "entities_metadata_stat": [1170, 1174], "include_nested_metadata": 1170, "add_missing_property_valu": [1170, 1174], "metadata_map": 1170, "create_ent": [1170, 1174], "delete_ent": [1170, 1174], "thu": 1170, "portabl": 1170, "clone": [1170, 1174], "precompute_lookup": [1170, 1174], "precomput": 1170, "repeatedli": 1170, "class_enrichment_calculation_interfac": 1171, "classenrichmentcalculationinterfac": [1171, 1174], "membership": 1171, "enriched_class": [1171, 1174], "item_list": 1171, "hypothes": 1171, "filter_redund": 1171, "sort_bi": 1171, "signific": 1171, "threshold": 1171, "odds_ratio": 1171, "create_self_associ": [1171, 1174], "0031965": 1171, "0016020": [1171, 1184], "004": 1171, "differ_interfac": 1172, "differinterfac": [1172, 1174], "grouped_diff": [1172, 1174], "diffconfigur": 1172, "yaml_dump": 1172, "path1": 1172, "path2": 1172, "noderenam": [1172, 1178], "old_valu": 1172, "catalyt": 1172, "new_valu": 1172, "enzym": 1172, "about_nod": 1172, "0003824": 1172, "sequenc": 1172, "diff_summari": [1172, 1174], "compare_ontology_term_list": [1172, 1174], "dumper_interfac": 1173, "dumperinterfac": [1173, 1174], "stdout": 1173, "search_interfac": [1174, 1180], "searchinterfac": [1174, 1180], "multiterm_search": [1174, 1180], "subsetterinterfac": [1174, 1182], "extract_subset_ontologi": [1174, 1182], "gap_fill_relationship": [1174, 1182], "term_curies_without_definit": [1174, 1185], "validate_map": [1174, 1185], "relationgraphinterfac": [1174, 1179], "entailed_outgoing_relationship": [1174, 1179], "entailed_incoming_relationship": [1174, 1179], "entailed_relationships_between": [1174, 1179], "sssom_mappings_by_sourc": [1174, 1175], "all_sssom_map": [1174, 1175], "get_sssom_mappings_by_curi": [1174, 1175], "get_transitive_mappings_by_curi": [1174, 1175], "normalize_prefix": [1174, 1175], "create_normalization_map": [1174, 1175], "enable_transitive_query_cach": [1174, 1176], "disable_transitive_query_cach": [1174, 1176], "synonym_map_for_curi": [1174, 1176], "ancestor_graph": [1174, 1176], "descendant_graph": [1174, 1176], "descendant_count": [1174, 1176], "subgraph_from_travers": [1174, 1176], "extract_graph": [1174, 1176], "relationships_to_graph": [1174, 1176], "walk_up_relationship_graph": [1174, 1176], "logical_definit": [1174, 1176], "disjoint_class_expressions_axiom": [1174, 1176], "add_metadata": [1174, 1176], "as_obograph": [1174, 1176], "load_graph": [1174, 1176], "traversalconfigur": [1174, 1176], "textannotatorinterfac": [1174, 1184], "cache_directori": [1174, 1184], "rule_collect": [1174, 1184], "annotate_text": [1174, 1184], "annotate_fil": [1174, 1184], "annotate_tabular_fil": [1174, 1184], "summarystatisticsinterfac": [1174, 1183], "global_summary_statist": [1174, 1183], "branch_summary_statist": [1174, 1183], "metadata_property_summary_statist": [1174, 1183], "summary_statistic_descript": [1174, 1183], "auto_add_contributor_us": [1174, 1178], "ignore_invalid_chang": [1174, 1178], "apply_patch": [1174, 1178], "expand_chang": [1174, 1178], "undo": [1174, 1178], "reverse_chang": [1174, 1178], "cached_information_content_map": [1174, 1181], "most_recent_common_ancestor": [1174, 1181], "setwise_most_recent_common_ancestor": [1174, 1181], "multiset_most_recent_common_ancestor": [1174, 1181], "common_ancestor": [1174, 1181], "get_information_cont": [1174, 1181], "information_content_scor": [1174, 1181], "pairwise_similar": [1174, 1181], "all_by_all_pairwise_similar": [1174, 1181], "subclass_axiom": [1174, 1177], "equivalence_axiom": [1174, 1177], "annotation_assertion_axiom": [1174, 1177], "disjoint_pair": [1174, 1177], "is_disjoint": [1174, 1177], "is_satisfi": [1174, 1177], "reasoner_configur": [1174, 1177], "axiom_is_about": [1174, 1177], "axiom_refer": [1174, 1177], "property_characterist": [1174, 1177], "transitive_object_properti": [1174, 1177], "simple_subproperty_of_chain": [1174, 1177], "overridden": 1174, "mapping_provider_interfac": 1175, "sssom_util": 1175, "central": 1175, "ec": 1175, "subject_or_object_sourc": 1175, "target_prefix": 1175, "source_prefix": 1175, "prefix_alias_map": 1175, "uniprot": 1175, "p12345": 1175, "nmap": 1175, "cell_nucleu": 1175, "object_prefix": 1175, "expand_curi": 1176, "start_curi": 1176, "interact": 1176, "opposit": 1176, "downward": 1176, "up_dist": 1176, "down_dist": 1176, "27": 1176, "ldef": 1176, "0009892": 1176, "regul": 1176, "metabol": 1176, "decor": 1176, "notimplementederror": 1176, "impract": 1176, "owl_interfac": 1177, "_funowl_datamodel": 1177, "owleri": 1177, "py4j": 1177, "superclass": 1177, "reasonerconfigur": 1177, "criterion": 1177, "annotationassert": 1177, "disjointclass": 1177, "subobjectpropertyof": 1177, "equivalentobjectproperti": 1177, "disjointobjectproperti": 1177, "inverseobjectproperti": 1177, "objectpropertydomain": 1177, "objectpropertyrang": 1177, "functionalobjectproperti": 1177, "inversefunctionalobjectproperti": 1177, "reflexiveobjectproperti": 1177, "irreflexiveobjectproperti": 1177, "symmetricobjectproperti": 1177, "asymmetricobjectproperti": 1177, "transitiveobjectproperti": 1177, "subdatapropertyof": 1177, "equivalentdataproperti": 1177, "disjointdataproperti": 1177, "datapropertydomain": 1177, "datapropertyrang": 1177, "functionaldataproperti": 1177, "datatypedefinit": 1177, "haskei": 1177, "sameindividu": 1177, "differentindividu": 1177, "classassert": 1177, "negativeobjectpropertyassert": 1177, "datapropertyassert": 1177, "negativedatapropertyassert": 1177, "subannotationpropertyof": 1177, "annotationpropertydomain": 1177, "annotationpropertyrang": 1177, "super": 1177, "propag": 1178, "dct": 1178, "tbd": 1178, "curie_map": 1178, "namebecomessynonym": 1178, "newsynonym": 1178, "relation_graph_interfac": 1179, "honor": 1180, "sqldatabaseimplement": [1180, 1185], "fulfil": 1180, "inexact": 1180, "fma": 1180, "9712": 1180, "0007723": 1180, "interphalang": 1180, "joint": 1180, "0007729": 1180, "_if_miss": [1180, 1184, 1197], "alter": [1180, 1197], "semsim_interfac": 1181, "include_owl_th": 1181, "asymmetr": 1181, "subject_ancestor": 1181, "object_ancestor": 1181, "use_associ": 1181, "term_to_entities_map": 1181, "freq": 1181, "subsetter_interfac": 1182, "roll": 1182, "seed_curi": 1182, "subsetstrategi": 1182, "basi": 1182, "summary_statistics_interfac": 1183, "branch_nam": 1183, "branch_root": 1183, "metadata_properti": 1183, "summary_statistics_datamodel": 1183, "text_annotator_interfac": 1184, "occurr": 1184, "cr": 1184, "mitochondrion": 1184, "hippocamp": 1184, "obviat": 1184, "scispaci": 1184, "oger": 1184, "ner": 1184, "35": 1184, "42": 1184, "18": 1184, "26": 1184, "textiowrapp": 1184, "result_column": 1184, "matched_id": 1184, "result_label_column": 1184, "matched_label": 1184, "match_multipl": 1184, "include_unmatch": 1184, "validator_interfac": 1185, "overal": 1185, "ontologymetadata": 1185, "quickli": 1185, "checker": 1185, "exclude_noth": 1185, "tautolog": 1185, "bewild": 1186, "constantli": 1186, "trip": 1186, "ld": 1186, "huh": 1186, "moment": 1186, "bioportalimplement": 1186, "colon": 1186, "guess": 1186, "get_implementation_from_shorthand": 1186, "get_implementation_class_from_schem": 1186, "activest": 1187, "appdir": 1187, "standalon": 1195, "fundament": 1196, "wild": 1196, "solv": 1196, "whilst": 1196, "retain": 1196, "intuit": 1196, "myontologi": 1196, "get_implentation_from_shorthand": 1196, "iao_0100001": 1196, "preliminari": 1197, "search1": 1197, "search2": 1197, "search3": 1197, "subtract": 1197, "create_search_configur": 1197}, "objects": {"oaklib.converters.data_model_converter": [[1145, 0, 1, "", "DataModelConverter"]], "oaklib.converters.data_model_converter.DataModelConverter": [[1145, 1, 1, "", "convert"], [1145, 2, 1, "", "curie_converter"], [1145, 1, 1, "", "dump"], [1145, 2, 1, "", "enforce_canonical_ordering"], [1145, 2, 1, "", "labeler"]], "oaklib.converters.obo_graph_to_cx_converter": [[1147, 0, 1, "", "OboGraphToCXConverter"]], "oaklib.converters.obo_graph_to_cx_converter.OboGraphToCXConverter": [[1147, 1, 1, "", "convert"], [1147, 1, 1, "", "dump"]], "oaklib.converters.obo_graph_to_fhir_converter": [[1148, 0, 1, "", "OboGraphToFHIRConverter"]], "oaklib.converters.obo_graph_to_fhir_converter.OboGraphToFHIRConverter": [[1148, 1, 1, "", "code"], [1148, 1, 1, "", "convert"], [1148, 1, 1, "", "dump"]], "oaklib.converters.obo_graph_to_obo_format_converter": [[1149, 0, 1, "", "OboGraphToOboFormatConverter"]], "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter": [[1149, 1, 1, "", "as_bytes_io"], [1149, 1, 1, "", "convert"], [1149, 1, 1, "", "dump"], [1149, 1, 1, "", "dumps"]], "oaklib.datamodels": [[1197, 3, 0, "-", "search"]], "oaklib.datamodels.search": [[1197, 0, 1, "", "SearchConfiguration"], [1197, 4, 1, "", "create_search_configuration"]], "oaklib.datamodels.text_annotator": [[1184, 0, 1, "", "TextAnnotation"]], "oaklib.implementations.aggregator.aggregator_implementation": [[1151, 0, 1, "", "AggregatorImplementation"]], "oaklib.implementations.funowl.funowl_implementation": [[1153, 0, 1, "", "FunOwlImplementation"]], "oaklib.implementations.gilda": [[1154, 0, 1, "", "GildaImplementation"]], "oaklib.implementations.obograph.obograph_implementation": [[1157, 0, 1, "", "OboGraphImplementation"]], "oaklib.implementations.ols.ols_implementation": [[1158, 0, 1, "", "OlsImplementation"]], "oaklib.implementations.ontobee.ontobee_implementation": [[1159, 0, 1, "", "OntobeeImplementation"]], "oaklib.implementations.owlery.owlery_implementation": [[1160, 0, 1, "", "OwleryImplementation"]], "oaklib.implementations.pantherdb.pantherdb_implementation": [[1161, 0, 1, "", "PantherDBImplementation"]], "oaklib.implementations.pronto.pronto_implementation": [[1162, 0, 1, "", "ProntoImplementation"]], "oaklib.implementations.simpleobo.simple_obo_implementation": [[1164, 0, 1, "", "SimpleOboImplementation"]], "oaklib.implementations.sparql.sparql_implementation": [[1165, 0, 1, "", "SparqlImplementation"]], "oaklib.implementations.sqldb.sql_implementation": [[1166, 0, 1, "", "SqlImplementation"]], "oaklib.implementations.sqldb.sql_implementation.SqlImplementation": [[1166, 1, 1, "", "create"]], "oaklib.implementations.ubergraph.ubergraph_implementation": [[1167, 0, 1, "", "RelationGraphEnum"], [1167, 0, 1, "", "UbergraphImplementation"]], "oaklib.interfaces.association_provider_interface": [[1169, 0, 1, "", "AssociationProviderInterface"]], "oaklib.interfaces.association_provider_interface.AssociationProviderInterface": [[1169, 1, 1, "", "add_associations"], [1169, 1, 1, "", "association_counts"], [1169, 1, 1, "", "association_pairwise_coassociations"], [1169, 1, 1, "", "association_subject_counts"], [1169, 1, 1, "", "associations"], [1169, 1, 1, "", "associations_subject_search"], [1169, 1, 1, "", "associations_subjects"], [1169, 1, 1, "", "map_associations"], [1169, 1, 1, "", "normalize_association"], [1169, 1, 1, "", "normalize_associations"]], "oaklib.interfaces.basic_ontology_interface": [[1170, 0, 1, "", "BasicOntologyInterface"]], "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface": [[1170, 1, 1, "", "add_missing_property_values"], [1170, 1, 1, "", "alias_map_by_curie"], [1170, 1, 1, "", "aliases_by_curie"], [1170, 1, 1, "", "all_entity_curies"], [1170, 1, 1, "", "all_obsolete_curies"], [1170, 1, 1, "", "all_ontology_curies"], [1170, 1, 1, "", "all_relationships"], [1170, 1, 1, "", "all_subset_curies"], [1170, 2, 1, "", "auto_relax_axioms"], [1170, 2, 1, "", "autosave"], [1170, 2, 1, "", "cache_lookups"], [1170, 1, 1, "", "clone"], [1170, 1, 1, "", "comments"], [1170, 5, 1, "", "converter"], [1170, 1, 1, "", "create_entity"], [1170, 1, 1, "", "curie_to_uri"], [1170, 1, 1, "", "curies_by_label"], [1170, 1, 1, "", "curies_by_subset"], [1170, 1, 1, "", "dangling"], [1170, 5, 1, "", "default_language"], [1170, 1, 1, "", "defined_by"], [1170, 1, 1, "", "defined_bys"], [1170, 1, 1, "", "definition"], [1170, 1, 1, "", "definitions"], [1170, 1, 1, "", "delete_entity"], [1170, 5, 1, "", "edge_index"], [1170, 5, 1, "", "entailed_edge_index"], [1170, 1, 1, "", "entities"], [1170, 1, 1, "", "entities_metadata_statements"], [1170, 1, 1, "", "entity_alias_map"], [1170, 1, 1, "", "entity_aliases"], [1170, 1, 1, "", "entity_metadata_map"], [1170, 2, 1, "", "exclude_owl_top_and_bottom"], [1170, 1, 1, "", "get_curies_by_label"], [1170, 1, 1, "", "get_definition_by_curie"], [1170, 1, 1, "", "get_label_by_curie"], [1170, 1, 1, "", "get_labels_for_curies"], [1170, 1, 1, "", "get_prefix_map"], [1170, 1, 1, "", "hierarchical_parents"], [1170, 1, 1, "", "incoming_relationship_map"], [1170, 1, 1, "", "incoming_relationships"], [1170, 1, 1, "", "label"], [1170, 1, 1, "", "labels"], [1170, 1, 1, "", "languages"], [1170, 1, 1, "", "leafs"], [1170, 5, 1, "", "multilingual"], [1170, 1, 1, "", "multilingual_labels"], [1170, 1, 1, "", "obsoletes"], [1170, 1, 1, "", "obsoletes_migration_relationships"], [1170, 1, 1, "", "ontologies"], [1170, 1, 1, "", "ontology_curies"], [1170, 1, 1, "", "ontology_metadata_map"], [1170, 2, 1, "", "ontology_metamodel_mapper"], [1170, 1, 1, "", "ontology_versions"], [1170, 1, 1, "", "outgoing_relationship_map"], [1170, 1, 1, "", "outgoing_relationships"], [1170, 1, 1, "", "owl_type"], [1170, 1, 1, "", "owl_types"], [1170, 1, 1, "", "precompute_lookups"], [1170, 1, 1, "", "prefix_map"], [1170, 1, 1, "", "query"], [1170, 1, 1, "", "relationships"], [1170, 1, 1, "", "relationships_metadata"], [1170, 1, 1, "", "roots"], [1170, 1, 1, "", "save"], [1170, 1, 1, "", "set_label"], [1170, 1, 1, "", "set_metamodel_mappings"], [1170, 1, 1, "", "simple_mappings"], [1170, 1, 1, "", "simple_mappings_by_curie"], [1170, 1, 1, "", "singletons"], [1170, 2, 1, "", "strict"], [1170, 1, 1, "", "subset_curies"], [1170, 1, 1, "", "subset_members"], [1170, 1, 1, "", "subsets"], [1170, 1, 1, "", "terms_categories"], [1170, 1, 1, "", "terms_subsets"], [1170, 1, 1, "", "uri_to_curie"]], "oaklib.interfaces.class_enrichment_calculation_interface": [[1171, 0, 1, "", "ClassEnrichmentCalculationInterface"]], "oaklib.interfaces.class_enrichment_calculation_interface.ClassEnrichmentCalculationInterface": [[1171, 1, 1, "", "create_self_associations"], [1171, 1, 1, "", "enriched_classes"]], "oaklib.interfaces.differ_interface": [[1172, 0, 1, "", "DifferInterface"]], "oaklib.interfaces.differ_interface.DifferInterface": [[1172, 2, 1, "", "autosave"], [1172, 1, 1, "", "compare_ontology_term_lists"], [1172, 1, 1, "", "diff"], [1172, 1, 1, "", "diff_summary"], [1172, 2, 1, "", "exclude_owl_top_and_bottom"], [1172, 1, 1, "", "grouped_diff"]], "oaklib.interfaces.dumper_interface": [[1173, 0, 1, "", "DumperInterface"]], "oaklib.interfaces.dumper_interface.DumperInterface": [[1173, 2, 1, "", "autosave"], [1173, 1, 1, "", "dump"], [1173, 2, 1, "", "exclude_owl_top_and_bottom"]], "oaklib.interfaces.mapping_provider_interface": [[1175, 0, 1, "", "MappingProviderInterface"]], "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface": [[1175, 1, 1, "", "all_sssom_mappings"], [1175, 2, 1, "", "autosave"], [1175, 1, 1, "", "create_normalization_map"], [1175, 2, 1, "", "exclude_owl_top_and_bottom"], [1175, 1, 1, "", "get_sssom_mappings_by_curie"], [1175, 1, 1, "", "get_transitive_mappings_by_curie"], [1175, 1, 1, "", "normalize"], [1175, 1, 1, "", "normalize_prefix"], [1175, 1, 1, "", "sssom_mappings"], [1175, 1, 1, "", "sssom_mappings_by_source"]], "oaklib.interfaces.obograph_interface": [[1176, 0, 1, "", "OboGraphInterface"], [1176, 0, 1, "", "TraversalConfiguration"]], "oaklib.interfaces.obograph_interface.OboGraphInterface": [[1176, 1, 1, "", "add_metadata"], [1176, 1, 1, "", "ancestor_graph"], [1176, 1, 1, "", "ancestors"], [1176, 1, 1, "", "as_obograph"], [1176, 1, 1, "", "descendant_count"], [1176, 1, 1, "", "descendant_graph"], [1176, 1, 1, "", "descendants"], [1176, 1, 1, "", "disable_transitive_query_cache"], [1176, 1, 1, "", "disjoint_class_expressions_axioms"], [1176, 1, 1, "", "edges"], [1176, 1, 1, "", "enable_transitive_query_cache"], [1176, 1, 1, "", "extract_graph"], [1176, 1, 1, "", "load_graph"], [1176, 1, 1, "", "logical_definitions"], [1176, 1, 1, "", "node"], [1176, 1, 1, "", "nodes"], [1176, 1, 1, "", "paths"], [1176, 1, 1, "", "relationships_to_graph"], [1176, 1, 1, "", "subgraph_from_traversal"], [1176, 1, 1, "", "synonym_map_for_curies"], [1176, 1, 1, "", "walk_up_relationship_graph"]], "oaklib.interfaces.owl_interface": [[1177, 0, 1, "", "OwlInterface"]], "oaklib.interfaces.owl_interface.OwlInterface": [[1177, 1, 1, "", "annotation_assertion_axioms"], [1177, 1, 1, "", "axiom_is_about"], [1177, 1, 1, "", "axiom_references"], [1177, 1, 1, "", "disjoint_pairs"], [1177, 1, 1, "", "equivalence_axioms"], [1177, 1, 1, "", "is_disjoint"], [1177, 1, 1, "", "is_satisfiable"], [1177, 1, 1, "", "property_characteristics"], [1177, 1, 1, "", "reasoner_configurations"], [1177, 1, 1, "", "simple_subproperty_of_chains"], [1177, 1, 1, "", "subclass_axioms"], [1177, 1, 1, "", "transitive_object_properties"]], "oaklib.interfaces.patcher_interface": [[1178, 0, 1, "", "PatcherInterface"]], "oaklib.interfaces.patcher_interface.PatcherInterface": [[1178, 1, 1, "", "apply_patch"], [1178, 2, 1, "", "auto_add_contributor_using"], [1178, 1, 1, "", "expand_change"], [1178, 1, 1, "", "expand_changes"], [1178, 2, 1, "", "ignore_invalid_changes"], [1178, 1, 1, "", "migrate_curies"], [1178, 1, 1, "", "reverse_changes"], [1178, 1, 1, "", "save"], [1178, 1, 1, "", "undo"]], "oaklib.interfaces.relation_graph_interface": [[1179, 0, 1, "", "RelationGraphInterface"]], "oaklib.interfaces.relation_graph_interface.RelationGraphInterface": [[1179, 2, 1, "", "autosave"], [1179, 1, 1, "", "entailed_incoming_relationships"], [1179, 1, 1, "", "entailed_outgoing_relationships"], [1179, 1, 1, "", "entailed_relationships_between"], [1179, 2, 1, "", "exclude_owl_top_and_bottom"]], "oaklib.interfaces.search_interface": [[1180, 0, 1, "", "SearchConfiguration"], [1180, 0, 1, "", "SearchInterface"]], "oaklib.interfaces.search_interface.SearchInterface": [[1180, 2, 1, "", "autosave"], [1180, 1, 1, "", "basic_search"], [1180, 2, 1, "", "exclude_owl_top_and_bottom"], [1180, 1, 1, "", "multiterm_search"]], "oaklib.interfaces.semsim_interface": [[1181, 0, 1, "", "SemanticSimilarityInterface"]], "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface": [[1181, 1, 1, "", "all_by_all_pairwise_similarity"], [1181, 2, 1, "", "cached_information_content_map"], [1181, 1, 1, "", "common_ancestors"], [1181, 1, 1, "", "get_information_content"], [1181, 1, 1, "", "information_content_scores"], [1181, 1, 1, "", "most_recent_common_ancestors"], [1181, 1, 1, "", "multiset_most_recent_common_ancestors"], [1181, 1, 1, "", "pairwise_similarity"], [1181, 1, 1, "", "setwise_most_recent_common_ancestors"]], "oaklib.interfaces.subsetter_interface": [[1182, 0, 1, "", "SubsetterInterface"]], "oaklib.interfaces.subsetter_interface.SubsetterInterface": [[1182, 2, 1, "", "autosave"], [1182, 2, 1, "", "exclude_owl_top_and_bottom"], [1182, 1, 1, "", "extract_subset_ontology"], [1182, 1, 1, "", "gap_fill_relationships"]], "oaklib.interfaces.summary_statistics_interface": [[1183, 0, 1, "", "SummaryStatisticsInterface"]], "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface": [[1183, 1, 1, "", "branch_summary_statistics"], [1183, 1, 1, "", "global_summary_statistics"], [1183, 1, 1, "", "metadata_property_summary_statistics"], [1183, 1, 1, "", "summary_statistic_description"]], "oaklib.interfaces.text_annotator_interface": [[1184, 0, 1, "", "TextAnnotatorInterface"]], "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface": [[1184, 1, 1, "", "annotate_file"], [1184, 1, 1, "", "annotate_tabular_file"], [1184, 1, 1, "", "annotate_text"], [1184, 2, 1, "", "cache_directory"], [1184, 2, 1, "", "lexical_index"], [1184, 2, 1, "", "rule_collection"]], "oaklib.interfaces.validator_interface": [[1185, 0, 1, "", "ValidatorInterface"]], "oaklib.interfaces.validator_interface.ValidatorInterface": [[1185, 2, 1, "", "autosave"], [1185, 2, 1, "", "exclude_owl_top_and_bottom"], [1185, 1, 1, "", "is_coherent"], [1185, 1, 1, "", "repair"], [1185, 1, 1, "", "term_curies_without_definitions"], [1185, 1, 1, "", "unsatisfiable_classes"], [1185, 1, 1, "", "validate"], [1185, 1, 1, "", "validate_mappings"]], "oaklib": [[1186, 3, 0, "-", "selector"]], "oaklib.selector": [[1186, 4, 1, "", "add_associations"], [1186, 4, 1, "", "get_adapter"], [1186, 4, 1, "", "get_implementation_class_from_scheme"], [1186, 4, 1, "", "get_implementation_from_shorthand"], [1186, 4, 1, "", "get_resource_from_shorthand"]], "oaklib.utilities": [[1187, 3, 0, "-", "apikey_manager"], [1191, 3, 0, "-", "obograph_utils"], [1193, 3, 0, "-", "table_filler"], [1194, 3, 0, "-", "taxon"]], "oaklib.utilities.graph": [[1188, 3, 0, "-", "networkx_bridge"], [1189, 3, 0, "-", "relationship_walker"]], "oaklib.utilities.lexical": [[1190, 3, 0, "-", "lexical_indexer"]], "oaklib.utilities.subsets": [[1192, 3, 0, "-", "slimmer_utils"]], "semsql.sqla.semsql": [[1166, 0, 1, "", "Edge"], [1166, 0, 1, "", "EntailedEdge"], [1166, 0, 1, "", "Statements"]], "runoak-aliases": [[0, 6, 1, "cmdoption-runoak-aliases-obo-model", "--no-obo-model"], [0, 6, 1, "cmdoption-runoak-aliases-obo-model", "--obo-model"], [0, 6, 1, "cmdoption-runoak-aliases-o", "--output"], [0, 6, 1, "cmdoption-runoak-aliases-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-aliases-O", "-O"], [0, 6, 1, "cmdoption-runoak-aliases-o", "-o"], [0, 6, 1, "cmdoption-runoak-aliases-arg-TERMS", "TERMS"]], "runoak-ancestors": [[0, 6, 1, "cmdoption-runoak-ancestors-M", "--graph-traversal-method"], [0, 6, 1, "cmdoption-runoak-ancestors-statistics", "--no-statistics"], [0, 6, 1, "cmdoption-runoak-ancestors-o", "--output"], [0, 6, 1, "cmdoption-runoak-ancestors-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-ancestors-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-ancestors-statistics", "--statistics"], [0, 6, 1, "cmdoption-runoak-ancestors-M", "-M"], [0, 6, 1, "cmdoption-runoak-ancestors-O", "-O"], [0, 6, 1, "cmdoption-runoak-ancestors-o", "-o"], [0, 6, 1, "cmdoption-runoak-ancestors-p", "-p"], [0, 6, 1, "cmdoption-runoak-ancestors-arg-TERMS", "TERMS"]], "runoak-annotate": [[0, 6, 1, "cmdoption-runoak-annotate-C", "--configuration-file"], [0, 6, 1, "cmdoption-runoak-annotate-x", "--exclude-tokens"], [0, 6, 1, "cmdoption-runoak-annotate-include-aliases", "--include-aliases"], [0, 6, 1, "cmdoption-runoak-annotate-L", "--lexical-index-file"], [0, 6, 1, "cmdoption-runoak-annotate-A", "--match-column"], [0, 6, 1, "cmdoption-runoak-annotate-W", "--matches-whole-text"], [0, 6, 1, "cmdoption-runoak-annotate-m", "--model"], [0, 6, 1, "cmdoption-runoak-annotate-W", "--no-W"], [0, 6, 1, "cmdoption-runoak-annotate-include-aliases", "--no-include-aliases"], [0, 6, 1, "cmdoption-runoak-annotate-W", "--no-matches-whole-text"], [0, 6, 1, "cmdoption-runoak-annotate-o", "--output"], [0, 6, 1, "cmdoption-runoak-annotate-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-annotate-R", "--rules-file"], [0, 6, 1, "cmdoption-runoak-annotate-text-file", "--text-file"], [0, 6, 1, "cmdoption-runoak-annotate-A", "-A"], [0, 6, 1, "cmdoption-runoak-annotate-C", "-C"], [0, 6, 1, "cmdoption-runoak-annotate-L", "-L"], [0, 6, 1, "cmdoption-runoak-annotate-O", "-O"], [0, 6, 1, "cmdoption-runoak-annotate-R", "-R"], [0, 6, 1, "cmdoption-runoak-annotate-W", "-W"], [0, 6, 1, "cmdoption-runoak-annotate-m", "-m"], [0, 6, 1, "cmdoption-runoak-annotate-o", "-o"], [0, 6, 1, "cmdoption-runoak-annotate-x", "-x"], [0, 6, 1, "cmdoption-runoak-annotate-arg-WORDS", "WORDS"]], "runoak-apply-obsolete": [[0, 6, 1, "cmdoption-runoak-apply-obsolete-expand", "--expand"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-ignore-invalid-changes", "--ignore-invalid-changes"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-expand", "--no-expand"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-ignore-invalid-changes", "--no-ignore-invalid-changes"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-o", "--output"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-O", "-O"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-o", "-o"], [0, 6, 1, "cmdoption-runoak-apply-obsolete-arg-TERMS", "TERMS"]], "runoak-apply-taxon-constraints": [[0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-E", "--evolution-file"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-M", "--graph-traversal-method"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-o", "--output"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-E", "-E"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-M", "-M"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-o", "-o"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-p", "-p"], [0, 6, 1, "cmdoption-runoak-apply-taxon-constraints-arg-CONSTRAINTS", "CONSTRAINTS"]], "runoak-apply": [[0, 6, 1, "cmdoption-runoak-apply-changes-format", "--changes-format"], [0, 6, 1, "cmdoption-runoak-apply-changes-input", "--changes-input"], [0, 6, 1, "cmdoption-runoak-apply-changes-output", "--changes-output"], [0, 6, 1, "cmdoption-runoak-apply-contributor", "--contributor"], [0, 6, 1, "cmdoption-runoak-apply-dry-run", "--dry-run"], [0, 6, 1, "cmdoption-runoak-apply-expand", "--expand"], [0, 6, 1, "cmdoption-runoak-apply-ignore-invalid-changes", "--ignore-invalid-changes"], [0, 6, 1, "cmdoption-runoak-apply-dry-run", "--no-dry-run"], [0, 6, 1, "cmdoption-runoak-apply-expand", "--no-expand"], [0, 6, 1, "cmdoption-runoak-apply-ignore-invalid-changes", "--no-ignore-invalid-changes"], [0, 6, 1, "cmdoption-runoak-apply-overwrite", "--no-overwrite"], [0, 6, 1, "cmdoption-runoak-apply-o", "--output"], [0, 6, 1, "cmdoption-runoak-apply-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-apply-overwrite", "--overwrite"], [0, 6, 1, "cmdoption-runoak-apply-O", "-O"], [0, 6, 1, "cmdoption-runoak-apply-o", "-o"], [0, 6, 1, "cmdoption-runoak-apply-arg-COMMANDS", "COMMANDS"]], "runoak-associations-counts": [[0, 6, 1, "cmdoption-runoak-associations-counts-add-closure-fields", "--add-closure-fields"], [0, 6, 1, "cmdoption-runoak-associations-counts-association-predicates", "--association-predicates"], [0, 6, 1, "cmdoption-runoak-associations-counts-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-associations-counts-F", "--filter"], [0, 6, 1, "cmdoption-runoak-associations-counts-group-by", "--group-by"], [0, 6, 1, "cmdoption-runoak-associations-counts-L", "--limit"], [0, 6, 1, "cmdoption-runoak-associations-counts-min-facet-count", "--min-facet-count"], [0, 6, 1, "cmdoption-runoak-associations-counts-add-closure-fields", "--no-add-closure-fields"], [0, 6, 1, "cmdoption-runoak-associations-counts-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-associations-counts-o", "--output"], [0, 6, 1, "cmdoption-runoak-associations-counts-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-associations-counts-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-associations-counts-Q", "--terms-role"], [0, 6, 1, "cmdoption-runoak-associations-counts-F", "-F"], [0, 6, 1, "cmdoption-runoak-associations-counts-L", "-L"], [0, 6, 1, "cmdoption-runoak-associations-counts-O", "-O"], [0, 6, 1, "cmdoption-runoak-associations-counts-Q", "-Q"], [0, 6, 1, "cmdoption-runoak-associations-counts-o", "-o"], [0, 6, 1, "cmdoption-runoak-associations-counts-p", "-p"], [0, 6, 1, "cmdoption-runoak-associations-counts-arg-TERMS", "TERMS"]], "runoak-associations-matrix": [[0, 6, 1, "cmdoption-runoak-associations-matrix-association-predicates", "--association-predicates"], [0, 6, 1, "cmdoption-runoak-associations-matrix-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-associations-matrix-include-entities", "--include-entities"], [0, 6, 1, "cmdoption-runoak-associations-matrix-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-associations-matrix-include-entities", "--no-include-entities"], [0, 6, 1, "cmdoption-runoak-associations-matrix-o", "--output"], [0, 6, 1, "cmdoption-runoak-associations-matrix-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-associations-matrix-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-associations-matrix-Q", "--terms-role"], [0, 6, 1, "cmdoption-runoak-associations-matrix-O", "-O"], [0, 6, 1, "cmdoption-runoak-associations-matrix-Q", "-Q"], [0, 6, 1, "cmdoption-runoak-associations-matrix-o", "-o"], [0, 6, 1, "cmdoption-runoak-associations-matrix-p", "-p"], [0, 6, 1, "cmdoption-runoak-associations-matrix-arg-TERMS", "TERMS"]], "runoak-associations": [[0, 6, 1, "cmdoption-runoak-associations-add-closure-fields", "--add-closure-fields"], [0, 6, 1, "cmdoption-runoak-associations-association-predicates", "--association-predicates"], [0, 6, 1, "cmdoption-runoak-associations-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-associations-if-absent", "--if-absent"], [0, 6, 1, "cmdoption-runoak-associations-add-closure-fields", "--no-add-closure-fields"], [0, 6, 1, "cmdoption-runoak-associations-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-associations-o", "--output"], [0, 6, 1, "cmdoption-runoak-associations-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-associations-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-associations-S", "--set-value"], [0, 6, 1, "cmdoption-runoak-associations-Q", "--terms-role"], [0, 6, 1, "cmdoption-runoak-associations-O", "-O"], [0, 6, 1, "cmdoption-runoak-associations-Q", "-Q"], [0, 6, 1, "cmdoption-runoak-associations-S", "-S"], [0, 6, 1, "cmdoption-runoak-associations-o", "-o"], [0, 6, 1, "cmdoption-runoak-associations-p", "-p"], [0, 6, 1, "cmdoption-runoak-associations-arg-TERMS", "TERMS"]], "runoak-axioms": [[0, 6, 1, "cmdoption-runoak-axioms-about", "--about"], [0, 6, 1, "cmdoption-runoak-axioms-axiom-type", "--axiom-type"], [0, 6, 1, "cmdoption-runoak-axioms-o", "--output"], [0, 6, 1, "cmdoption-runoak-axioms-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-axioms-references", "--references"], [0, 6, 1, "cmdoption-runoak-axioms-O", "-O"], [0, 6, 1, "cmdoption-runoak-axioms-o", "-o"], [0, 6, 1, "cmdoption-runoak-axioms-arg-TERMS", "TERMS"]], "runoak-cache-clear": [[0, 6, 1, "cmdoption-runoak-cache-clear-days-old", "--days-old"]], "runoak-definitions": [[0, 6, 1, "cmdoption-runoak-definitions-additional-metadata", "--additional-metadata"], [0, 6, 1, "cmdoption-runoak-definitions-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-definitions-D", "--display"], [0, 6, 1, "cmdoption-runoak-definitions-if-absent", "--if-absent"], [0, 6, 1, "cmdoption-runoak-definitions-additional-metadata", "--no-additional-metadata"], [0, 6, 1, "cmdoption-runoak-definitions-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-definitions-o", "--output"], [0, 6, 1, "cmdoption-runoak-definitions-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-definitions-S", "--set-value"], [0, 6, 1, "cmdoption-runoak-definitions-D", "-D"], [0, 6, 1, "cmdoption-runoak-definitions-O", "-O"], [0, 6, 1, "cmdoption-runoak-definitions-S", "-S"], [0, 6, 1, "cmdoption-runoak-definitions-o", "-o"], [0, 6, 1, "cmdoption-runoak-definitions-arg-TERMS", "TERMS"]], "runoak-descendants": [[0, 6, 1, "cmdoption-runoak-descendants-D", "--display"], [0, 6, 1, "cmdoption-runoak-descendants-M", "--graph-traversal-method"], [0, 6, 1, "cmdoption-runoak-descendants-o", "--output"], [0, 6, 1, "cmdoption-runoak-descendants-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-descendants-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-descendants-D", "-D"], [0, 6, 1, "cmdoption-runoak-descendants-M", "-M"], [0, 6, 1, "cmdoption-runoak-descendants-O", "-O"], [0, 6, 1, "cmdoption-runoak-descendants-o", "-o"], [0, 6, 1, "cmdoption-runoak-descendants-p", "-p"], [0, 6, 1, "cmdoption-runoak-descendants-arg-TERMS", "TERMS"]], "runoak-diff-associations": [[0, 6, 1, "cmdoption-runoak-diff-associations-g", "--associations"], [0, 6, 1, "cmdoption-runoak-diff-associations-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-diff-associations-group-by", "--group-by"], [0, 6, 1, "cmdoption-runoak-diff-associations-new-date", "--new-date"], [0, 6, 1, "cmdoption-runoak-diff-associations-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-diff-associations-old-date", "--old-date"], [0, 6, 1, "cmdoption-runoak-diff-associations-X", "--other-associations"], [0, 6, 1, "cmdoption-runoak-diff-associations-o", "--output"], [0, 6, 1, "cmdoption-runoak-diff-associations-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-diff-associations-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-diff-associations-O", "-O"], [0, 6, 1, "cmdoption-runoak-diff-associations-X", "-X"], [0, 6, 1, "cmdoption-runoak-diff-associations-g", "-g"], [0, 6, 1, "cmdoption-runoak-diff-associations-o", "-o"], [0, 6, 1, "cmdoption-runoak-diff-associations-p", "-p"]], "runoak-diff-terms": [[0, 6, 1, "cmdoption-runoak-diff-terms-other-ontology", "--other-ontology"], [0, 6, 1, "cmdoption-runoak-diff-terms-o", "--output"], [0, 6, 1, "cmdoption-runoak-diff-terms-o", "-o"], [0, 6, 1, "cmdoption-runoak-diff-terms-arg-TERMS", "TERMS"]], "runoak-diff-via-mappings": [[0, 6, 1, "cmdoption-runoak-diff-via-mappings-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-bidirectional", "--bidirectional"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-filter-category-identical", "--filter-category-identical"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-include-identity-mappings", "--include-identity-mappings"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-intra", "--intra"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-mapping-input", "--mapping-input"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-bidirectional", "--no-bidirectional"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-filter-category-identical", "--no-filter-category-identical"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-include-identity-mappings", "--no-include-identity-mappings"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-intra", "--no-intra"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-X", "--other-input"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-other-input-type", "--other-input-type"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-o", "--output"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-S", "--source"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-O", "-O"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-S", "-S"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-X", "-X"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-o", "-o"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-p", "-p"], [0, 6, 1, "cmdoption-runoak-diff-via-mappings-arg-TERMS", "TERMS"]], "runoak-diff": [[0, 6, 1, "cmdoption-runoak-diff-change-type", "--change-type"], [0, 6, 1, "cmdoption-runoak-diff-group-by-defined-by", "--group-by-defined-by"], [0, 6, 1, "cmdoption-runoak-diff-group-by-obo-namespace", "--group-by-obo-namespace"], [0, 6, 1, "cmdoption-runoak-diff-group-by-prefix", "--group-by-prefix"], [0, 6, 1, "cmdoption-runoak-diff-group-by-property", "--group-by-property"], [0, 6, 1, "cmdoption-runoak-diff-group-by-defined-by", "--no-group-by-defined-by"], [0, 6, 1, "cmdoption-runoak-diff-group-by-obo-namespace", "--no-group-by-obo-namespace"], [0, 6, 1, "cmdoption-runoak-diff-group-by-prefix", "--no-group-by-prefix"], [0, 6, 1, "cmdoption-runoak-diff-simple", "--no-simple"], [0, 6, 1, "cmdoption-runoak-diff-statistics", "--no-statistics"], [0, 6, 1, "cmdoption-runoak-diff-X", "--other-ontology"], [0, 6, 1, "cmdoption-runoak-diff-o", "--output"], [0, 6, 1, "cmdoption-runoak-diff-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-diff-simple", "--simple"], [0, 6, 1, "cmdoption-runoak-diff-statistics", "--statistics"], [0, 6, 1, "cmdoption-runoak-diff-O", "-O"], [0, 6, 1, "cmdoption-runoak-diff-X", "-X"], [0, 6, 1, "cmdoption-runoak-diff-o", "-o"]], "runoak-disjoints": [[0, 6, 1, "cmdoption-runoak-disjoints-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-disjoints-named-classes-only", "--named-classes-only"], [0, 6, 1, "cmdoption-runoak-disjoints-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-disjoints-named-classes-only", "--no-named-classes-only"], [0, 6, 1, "cmdoption-runoak-disjoints-o", "--output"], [0, 6, 1, "cmdoption-runoak-disjoints-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-disjoints-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-disjoints-O", "-O"], [0, 6, 1, "cmdoption-runoak-disjoints-o", "-o"], [0, 6, 1, "cmdoption-runoak-disjoints-p", "-p"], [0, 6, 1, "cmdoption-runoak-disjoints-arg-TERMS", "TERMS"]], "runoak-dump": [[0, 6, 1, "cmdoption-runoak-dump-c", "--config-file"], [0, 6, 1, "cmdoption-runoak-dump-enforce-canonical-ordering", "--enforce-canonical-ordering"], [0, 6, 1, "cmdoption-runoak-dump-enforce-canonical-ordering", "--no-enforce-canonical-ordering"], [0, 6, 1, "cmdoption-runoak-dump-o", "--output"], [0, 6, 1, "cmdoption-runoak-dump-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-dump-O", "-O"], [0, 6, 1, "cmdoption-runoak-dump-c", "-c"], [0, 6, 1, "cmdoption-runoak-dump-o", "-o"], [0, 6, 1, "cmdoption-runoak-dump-arg-TERMS", "TERMS"]], "runoak-enrichment": [[0, 6, 1, "cmdoption-runoak-enrichment-allow-labels", "--allow-labels"], [0, 6, 1, "cmdoption-runoak-enrichment-association-predicates", "--association-predicates"], [0, 6, 1, "cmdoption-runoak-enrichment-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-enrichment-B", "--background-file"], [0, 6, 1, "cmdoption-runoak-enrichment-cutoff", "--cutoff"], [0, 6, 1, "cmdoption-runoak-enrichment-filter-redundant", "--filter-redundant"], [0, 6, 1, "cmdoption-runoak-enrichment-allow-labels", "--no-allow-labels"], [0, 6, 1, "cmdoption-runoak-enrichment-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-enrichment-filter-redundant", "--no-filter-redundant"], [0, 6, 1, "cmdoption-runoak-enrichment-ontology-only", "--no-ontology-only"], [0, 6, 1, "cmdoption-runoak-enrichment-ontology-only", "--ontology-only"], [0, 6, 1, "cmdoption-runoak-enrichment-o", "--output"], [0, 6, 1, "cmdoption-runoak-enrichment-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-enrichment-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-enrichment-U", "--sample-file"], [0, 6, 1, "cmdoption-runoak-enrichment-B", "-B"], [0, 6, 1, "cmdoption-runoak-enrichment-O", "-O"], [0, 6, 1, "cmdoption-runoak-enrichment-U", "-U"], [0, 6, 1, "cmdoption-runoak-enrichment-o", "-o"], [0, 6, 1, "cmdoption-runoak-enrichment-p", "-p"], [0, 6, 1, "cmdoption-runoak-enrichment-arg-TERMS", "TERMS"]], "runoak-expand-subsets": [[0, 6, 1, "cmdoption-runoak-expand-subsets-o", "--output"], [0, 6, 1, "cmdoption-runoak-expand-subsets-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-expand-subsets-o", "-o"], [0, 6, 1, "cmdoption-runoak-expand-subsets-p", "-p"], [0, 6, 1, "cmdoption-runoak-expand-subsets-arg-SUBSETS", "SUBSETS"]], "runoak-extract": [[0, 6, 1, "cmdoption-runoak-extract-dangling", "--dangling"], [0, 6, 1, "cmdoption-runoak-extract-include-metadata", "--include-metadata"], [0, 6, 1, "cmdoption-runoak-extract-dangling", "--no-dangling"], [0, 6, 1, "cmdoption-runoak-extract-include-metadata", "--no-include-metadata"], [0, 6, 1, "cmdoption-runoak-extract-o", "--output"], [0, 6, 1, "cmdoption-runoak-extract-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-extract-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-extract-O", "-O"], [0, 6, 1, "cmdoption-runoak-extract-o", "-o"], [0, 6, 1, "cmdoption-runoak-extract-p", "-p"], [0, 6, 1, "cmdoption-runoak-extract-arg-TERMS", "TERMS"]], "runoak-fill-table": [[0, 6, 1, "cmdoption-runoak-fill-table-allow-missing", "--allow-missing"], [0, 6, 1, "cmdoption-runoak-fill-table-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-fill-table-comment", "--comment"], [0, 6, 1, "cmdoption-runoak-fill-table-delimiter", "--delimiter"], [0, 6, 1, "cmdoption-runoak-fill-table-missing-value-token", "--missing-value-token"], [0, 6, 1, "cmdoption-runoak-fill-table-allow-missing", "--no-allow-missing"], [0, 6, 1, "cmdoption-runoak-fill-table-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-fill-table-o", "--output"], [0, 6, 1, "cmdoption-runoak-fill-table-relation", "--relation"], [0, 6, 1, "cmdoption-runoak-fill-table-relation-file", "--relation-file"], [0, 6, 1, "cmdoption-runoak-fill-table-schema", "--schema"], [0, 6, 1, "cmdoption-runoak-fill-table-o", "-o"], [0, 6, 1, "cmdoption-runoak-fill-table-arg-TABLE_FILE", "TABLE_FILE"]], "runoak-generate-definitions": [[0, 6, 1, "cmdoption-runoak-generate-definitions-apply-patch", "--apply-patch"], [0, 6, 1, "cmdoption-runoak-generate-definitions-apply-patch", "--no-apply-patch"], [0, 6, 1, "cmdoption-runoak-generate-definitions-o", "--output"], [0, 6, 1, "cmdoption-runoak-generate-definitions-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-generate-definitions-patch", "--patch"], [0, 6, 1, "cmdoption-runoak-generate-definitions-patch-format", "--patch-format"], [0, 6, 1, "cmdoption-runoak-generate-definitions-style-hints", "--style-hints"], [0, 6, 1, "cmdoption-runoak-generate-definitions-O", "-O"], [0, 6, 1, "cmdoption-runoak-generate-definitions-o", "-o"], [0, 6, 1, "cmdoption-runoak-generate-definitions-arg-TERMS", "TERMS"]], "runoak-generate-disjoints": [[0, 6, 1, "cmdoption-runoak-generate-disjoints-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-exclude-existing", "--exclude-existing"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-M", "--min-descendants"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-exclude-existing", "--no-exclude-existing"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-o", "--output"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-M", "-M"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-O", "-O"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-o", "-o"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-p", "-p"], [0, 6, 1, "cmdoption-runoak-generate-disjoints-arg-TERMS", "TERMS"]], "runoak-generate-lexical-replacements": [[0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-apply-patch", "--apply-patch"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-apply-patch", "--no-apply-patch"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-o", "--output"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-patch", "--patch"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-patch-format", "--patch-format"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-Y", "--rules-expression"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-R", "--rules-file"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-O", "-O"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-R", "-R"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-Y", "-Y"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-o", "-o"], [0, 6, 1, "cmdoption-runoak-generate-lexical-replacements-arg-TERMS", "TERMS"]], "runoak-generate-logical-definitions": [[0, 6, 1, "cmdoption-runoak-generate-logical-definitions-analyze", "--analyze"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-fill", "--fill"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-analyze", "--no-analyze"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-fill", "--no-fill"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-parse", "--no-parse"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-show-extract", "--no-show-extract"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-unmelt", "--no-unmelt"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-o", "--output"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-parse", "--parse"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-P", "--patterns-file"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-show-extract", "--show-extract"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-unmelt", "--unmelt"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-O", "-O"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-P", "-P"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-o", "-o"], [0, 6, 1, "cmdoption-runoak-generate-logical-definitions-arg-TERMS", "TERMS"]], "runoak-generate-synonyms": [[0, 6, 1, "cmdoption-runoak-generate-synonyms-apply-patch", "--apply-patch"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-apply-patch", "--no-apply-patch"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-o", "--output"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-patch", "--patch"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-patch-format", "--patch-format"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-R", "--rules-file"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-O", "-O"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-R", "-R"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-o", "-o"], [0, 6, 1, "cmdoption-runoak-generate-synonyms-arg-TERMS", "TERMS"]], "runoak-info": [[0, 6, 1, "cmdoption-runoak-info-D", "--display"], [0, 6, 1, "cmdoption-runoak-info-o", "--output"], [0, 6, 1, "cmdoption-runoak-info-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-info-D", "-D"], [0, 6, 1, "cmdoption-runoak-info-O", "-O"], [0, 6, 1, "cmdoption-runoak-info-o", "-o"], [0, 6, 1, "cmdoption-runoak-info-arg-TERMS", "TERMS"]], "runoak-information-content": [[0, 6, 1, "cmdoption-runoak-information-content-use-associations", "--no-use-associations"], [0, 6, 1, "cmdoption-runoak-information-content-o", "--output"], [0, 6, 1, "cmdoption-runoak-information-content-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-information-content-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-information-content-use-associations", "--use-associations"], [0, 6, 1, "cmdoption-runoak-information-content-O", "-O"], [0, 6, 1, "cmdoption-runoak-information-content-o", "-o"], [0, 6, 1, "cmdoption-runoak-information-content-p", "-p"], [0, 6, 1, "cmdoption-runoak-information-content-arg-TERMS", "TERMS"]], "runoak-labels": [[0, 6, 1, "cmdoption-runoak-labels-all-languages", "--all-languages"], [0, 6, 1, "cmdoption-runoak-labels-D", "--display"], [0, 6, 1, "cmdoption-runoak-labels-if-absent", "--if-absent"], [0, 6, 1, "cmdoption-runoak-labels-all-languages", "--no-all-languages"], [0, 6, 1, "cmdoption-runoak-labels-pivot-languages", "--no-pivot-languages"], [0, 6, 1, "cmdoption-runoak-labels-o", "--output"], [0, 6, 1, "cmdoption-runoak-labels-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-labels-pivot-languages", "--pivot-languages"], [0, 6, 1, "cmdoption-runoak-labels-S", "--set-value"], [0, 6, 1, "cmdoption-runoak-labels-D", "-D"], [0, 6, 1, "cmdoption-runoak-labels-O", "-O"], [0, 6, 1, "cmdoption-runoak-labels-S", "-S"], [0, 6, 1, "cmdoption-runoak-labels-o", "-o"], [0, 6, 1, "cmdoption-runoak-labels-arg-TERMS", "TERMS"]], "runoak-leafs": [[0, 6, 1, "cmdoption-runoak-leafs-filter-obsoletes", "--filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-leafs-filter-obsoletes", "--no-filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-leafs-o", "--output"], [0, 6, 1, "cmdoption-runoak-leafs-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-leafs-o", "-o"], [0, 6, 1, "cmdoption-runoak-leafs-p", "-p"]], "runoak-lexmatch": [[0, 6, 1, "cmdoption-runoak-lexmatch-add-labels", "--add-labels"], [0, 6, 1, "cmdoption-runoak-lexmatch-ensure-strict-prefixes", "--ensure-strict-prefixes"], [0, 6, 1, "cmdoption-runoak-lexmatch-L", "--lexical-index-file"], [0, 6, 1, "cmdoption-runoak-lexmatch-add-labels", "--no-add-labels"], [0, 6, 1, "cmdoption-runoak-lexmatch-ensure-strict-prefixes", "--no-ensure-strict-prefixes"], [0, 6, 1, "cmdoption-runoak-lexmatch-recreate", "--no-recreate"], [0, 6, 1, "cmdoption-runoak-lexmatch-o", "--output"], [0, 6, 1, "cmdoption-runoak-lexmatch-recreate", "--recreate"], [0, 6, 1, "cmdoption-runoak-lexmatch-R", "--rules-file"], [0, 6, 1, "cmdoption-runoak-lexmatch-L", "-L"], [0, 6, 1, "cmdoption-runoak-lexmatch-R", "-R"], [0, 6, 1, "cmdoption-runoak-lexmatch-o", "-o"], [0, 6, 1, "cmdoption-runoak-lexmatch-arg-TERMS", "TERMS"]], "runoak-lint": [[0, 6, 1, "cmdoption-runoak-lint-dry-run", "--dry-run"], [0, 6, 1, "cmdoption-runoak-lint-dry-run", "--no-dry-run"], [0, 6, 1, "cmdoption-runoak-lint-o", "--output"], [0, 6, 1, "cmdoption-runoak-lint-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-lint-report-format", "--report-format"], [0, 6, 1, "cmdoption-runoak-lint-O", "-O"], [0, 6, 1, "cmdoption-runoak-lint-o", "-o"]], "runoak-logical-definitions": [[0, 6, 1, "cmdoption-runoak-logical-definitions-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-logical-definitions-if-absent", "--if-absent"], [0, 6, 1, "cmdoption-runoak-logical-definitions-matrix-axes", "--matrix-axes"], [0, 6, 1, "cmdoption-runoak-logical-definitions-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-logical-definitions-unmelt", "--no-unmelt"], [0, 6, 1, "cmdoption-runoak-logical-definitions-o", "--output"], [0, 6, 1, "cmdoption-runoak-logical-definitions-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-logical-definitions-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-logical-definitions-S", "--set-value"], [0, 6, 1, "cmdoption-runoak-logical-definitions-unmelt", "--unmelt"], [0, 6, 1, "cmdoption-runoak-logical-definitions-O", "-O"], [0, 6, 1, "cmdoption-runoak-logical-definitions-S", "-S"], [0, 6, 1, "cmdoption-runoak-logical-definitions-o", "-o"], [0, 6, 1, "cmdoption-runoak-logical-definitions-p", "-p"], [0, 6, 1, "cmdoption-runoak-logical-definitions-arg-TERMS", "TERMS"]], "runoak-mappings": [[0, 6, 1, "cmdoption-runoak-mappings-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-mappings-mapper", "--mapper"], [0, 6, 1, "cmdoption-runoak-mappings-M", "--maps-to-source"], [0, 6, 1, "cmdoption-runoak-mappings-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-mappings-o", "--output"], [0, 6, 1, "cmdoption-runoak-mappings-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-mappings-M", "-M"], [0, 6, 1, "cmdoption-runoak-mappings-O", "-O"], [0, 6, 1, "cmdoption-runoak-mappings-o", "-o"], [0, 6, 1, "cmdoption-runoak-mappings-arg-TERMS", "TERMS"]], "runoak-migrate-curies": [[0, 6, 1, "cmdoption-runoak-migrate-curies-replace", "--no-replace"], [0, 6, 1, "cmdoption-runoak-migrate-curies-o", "--output"], [0, 6, 1, "cmdoption-runoak-migrate-curies-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-migrate-curies-replace", "--replace"], [0, 6, 1, "cmdoption-runoak-migrate-curies-O", "-O"], [0, 6, 1, "cmdoption-runoak-migrate-curies-o", "-o"], [0, 6, 1, "cmdoption-runoak-migrate-curies-arg-CURIE_PAIRS", "CURIE_PAIRS"]], "runoak-normalize": [[0, 6, 1, "cmdoption-runoak-normalize-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-normalize-M", "--maps-to-source"], [0, 6, 1, "cmdoption-runoak-normalize-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-normalize-o", "--output"], [0, 6, 1, "cmdoption-runoak-normalize-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-normalize-M", "-M"], [0, 6, 1, "cmdoption-runoak-normalize-O", "-O"], [0, 6, 1, "cmdoption-runoak-normalize-o", "-o"], [0, 6, 1, "cmdoption-runoak-normalize-arg-TERMS", "TERMS"]], "runoak-obsoletes": [[0, 6, 1, "cmdoption-runoak-obsoletes-include-merged", "--include-merged"], [0, 6, 1, "cmdoption-runoak-obsoletes-include-merged", "--no-include-merged"], [0, 6, 1, "cmdoption-runoak-obsoletes-show-migration-relationships", "--no-show-migration-relationships"], [0, 6, 1, "cmdoption-runoak-obsoletes-o", "--output"], [0, 6, 1, "cmdoption-runoak-obsoletes-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-obsoletes-show-migration-relationships", "--show-migration-relationships"], [0, 6, 1, "cmdoption-runoak-obsoletes-O", "-O"], [0, 6, 1, "cmdoption-runoak-obsoletes-o", "-o"], [0, 6, 1, "cmdoption-runoak-obsoletes-arg-TERMS", "TERMS"]], "runoak-ontologies": [[0, 6, 1, "cmdoption-runoak-ontologies-o", "--output"], [0, 6, 1, "cmdoption-runoak-ontologies-o", "-o"]], "runoak-ontology-metadata": [[0, 6, 1, "cmdoption-runoak-ontology-metadata-all", "--all"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-all", "--no-all"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-o", "--output"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-O", "-O"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-o", "-o"], [0, 6, 1, "cmdoption-runoak-ontology-metadata-arg-ONTOLOGIES", "ONTOLOGIES"]], "runoak-ontology-versions": [[0, 6, 1, "cmdoption-runoak-ontology-versions-all", "--all"], [0, 6, 1, "cmdoption-runoak-ontology-versions-all", "--no-all"], [0, 6, 1, "cmdoption-runoak-ontology-versions-o", "--output"], [0, 6, 1, "cmdoption-runoak-ontology-versions-o", "-o"], [0, 6, 1, "cmdoption-runoak-ontology-versions-arg-ONTOLOGIES", "ONTOLOGIES"]], "runoak-paths": [[0, 6, 1, "cmdoption-runoak-paths-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-paths-C", "--configure"], [0, 6, 1, "cmdoption-runoak-paths-directed", "--directed"], [0, 6, 1, "cmdoption-runoak-paths-exclude-predicates", "--exclude-predicates"], [0, 6, 1, "cmdoption-runoak-paths-include-predicates", "--include-predicates"], [0, 6, 1, "cmdoption-runoak-paths-narrow", "--narrow"], [0, 6, 1, "cmdoption-runoak-paths-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-paths-directed", "--no-directed"], [0, 6, 1, "cmdoption-runoak-paths-include-predicates", "--no-include-predicates"], [0, 6, 1, "cmdoption-runoak-paths-narrow", "--no-narrow"], [0, 6, 1, "cmdoption-runoak-paths-viz", "--no-viz"], [0, 6, 1, "cmdoption-runoak-paths-o", "--output"], [0, 6, 1, "cmdoption-runoak-paths-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-paths-predicate-weights", "--predicate-weights"], [0, 6, 1, "cmdoption-runoak-paths-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-paths-S", "--stylemap"], [0, 6, 1, "cmdoption-runoak-paths-target", "--target"], [0, 6, 1, "cmdoption-runoak-paths-viz", "--viz"], [0, 6, 1, "cmdoption-runoak-paths-C", "-C"], [0, 6, 1, "cmdoption-runoak-paths-O", "-O"], [0, 6, 1, "cmdoption-runoak-paths-S", "-S"], [0, 6, 1, "cmdoption-runoak-paths-o", "-o"], [0, 6, 1, "cmdoption-runoak-paths-p", "-p"], [0, 6, 1, "cmdoption-runoak-paths-arg-TERMS", "TERMS"]], "runoak-prefixes": [[0, 6, 1, "cmdoption-runoak-prefixes-used-only", "--no-used-only"], [0, 6, 1, "cmdoption-runoak-prefixes-o", "--output"], [0, 6, 1, "cmdoption-runoak-prefixes-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-prefixes-used-only", "--used-only"], [0, 6, 1, "cmdoption-runoak-prefixes-O", "-O"], [0, 6, 1, "cmdoption-runoak-prefixes-o", "-o"], [0, 6, 1, "cmdoption-runoak-prefixes-arg-TERMS", "TERMS"]], "runoak-query": [[0, 6, 1, "cmdoption-runoak-query-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-query-L", "--label-fields"], [0, 6, 1, "cmdoption-runoak-query-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-query-o", "--output"], [0, 6, 1, "cmdoption-runoak-query-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-query-P", "--prefixes"], [0, 6, 1, "cmdoption-runoak-query-q", "--query"], [0, 6, 1, "cmdoption-runoak-query-L", "-L"], [0, 6, 1, "cmdoption-runoak-query-O", "-O"], [0, 6, 1, "cmdoption-runoak-query-P", "-P"], [0, 6, 1, "cmdoption-runoak-query-o", "-o"], [0, 6, 1, "cmdoption-runoak-query-q", "-q"]], "runoak-relationships": [[0, 6, 1, "cmdoption-runoak-relationships-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-relationships-direction", "--direction"], [0, 6, 1, "cmdoption-runoak-relationships-if-absent", "--if-absent"], [0, 6, 1, "cmdoption-runoak-relationships-include-abox", "--include-abox"], [0, 6, 1, "cmdoption-runoak-relationships-include-entailed", "--include-entailed"], [0, 6, 1, "cmdoption-runoak-relationships-include-metadata", "--include-metadata"], [0, 6, 1, "cmdoption-runoak-relationships-include-tbox", "--include-tbox"], [0, 6, 1, "cmdoption-runoak-relationships-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-relationships-include-abox", "--no-include-abox"], [0, 6, 1, "cmdoption-runoak-relationships-include-entailed", "--no-include-entailed"], [0, 6, 1, "cmdoption-runoak-relationships-include-metadata", "--no-include-metadata"], [0, 6, 1, "cmdoption-runoak-relationships-include-tbox", "--no-include-tbox"], [0, 6, 1, "cmdoption-runoak-relationships-o", "--output"], [0, 6, 1, "cmdoption-runoak-relationships-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-relationships-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-relationships-S", "--set-value"], [0, 6, 1, "cmdoption-runoak-relationships-O", "-O"], [0, 6, 1, "cmdoption-runoak-relationships-S", "-S"], [0, 6, 1, "cmdoption-runoak-relationships-o", "-o"], [0, 6, 1, "cmdoption-runoak-relationships-p", "-p"], [0, 6, 1, "cmdoption-runoak-relationships-arg-TERMS", "TERMS"]], "runoak-rollup": [[0, 6, 1, "cmdoption-runoak-rollup-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-rollup-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-rollup-object-group", "--object-group"], [0, 6, 1, "cmdoption-runoak-rollup-o", "--output"], [0, 6, 1, "cmdoption-runoak-rollup-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-rollup-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-rollup-O", "-O"], [0, 6, 1, "cmdoption-runoak-rollup-o", "-o"], [0, 6, 1, "cmdoption-runoak-rollup-p", "-p"], [0, 6, 1, "cmdoption-runoak-rollup-arg-TERMS", "TERMS"]], "runoak-roots": [[0, 6, 1, "cmdoption-runoak-roots-A", "--annotated-roots"], [0, 6, 1, "cmdoption-runoak-roots-P", "--has-prefix"], [0, 6, 1, "cmdoption-runoak-roots-A", "--no-A"], [0, 6, 1, "cmdoption-runoak-roots-A", "--no-annotated-roots"], [0, 6, 1, "cmdoption-runoak-roots-o", "--output"], [0, 6, 1, "cmdoption-runoak-roots-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-roots-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-roots-A", "-A"], [0, 6, 1, "cmdoption-runoak-roots-O", "-O"], [0, 6, 1, "cmdoption-runoak-roots-P", "-P"], [0, 6, 1, "cmdoption-runoak-roots-o", "-o"], [0, 6, 1, "cmdoption-runoak-roots-p", "-p"]], "runoak-search": [[0, 6, 1, "cmdoption-runoak-search-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-search-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-search-o", "--output"], [0, 6, 1, "cmdoption-runoak-search-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-search-O", "-O"], [0, 6, 1, "cmdoption-runoak-search-o", "-o"], [0, 6, 1, "cmdoption-runoak-search-arg-TERMS", "TERMS"]], "runoak-set-apikey": [[0, 6, 1, "cmdoption-runoak-set-apikey-e", "--endpoint"], [0, 6, 1, "cmdoption-runoak-set-apikey-e", "-e"], [0, 6, 1, "cmdoption-runoak-set-apikey-arg-KEYVAL", "KEYVAL"]], "runoak-siblings": [[0, 6, 1, "cmdoption-runoak-siblings-o", "--output"], [0, 6, 1, "cmdoption-runoak-siblings-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-siblings-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-siblings-O", "-O"], [0, 6, 1, "cmdoption-runoak-siblings-o", "-o"], [0, 6, 1, "cmdoption-runoak-siblings-p", "-p"], [0, 6, 1, "cmdoption-runoak-siblings-arg-TERMS", "TERMS"]], "runoak-similarity-pair": [[0, 6, 1, "cmdoption-runoak-similarity-pair-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-similarity-pair-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-similarity-pair-o", "--output"], [0, 6, 1, "cmdoption-runoak-similarity-pair-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-similarity-pair-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-similarity-pair-O", "-O"], [0, 6, 1, "cmdoption-runoak-similarity-pair-o", "-o"], [0, 6, 1, "cmdoption-runoak-similarity-pair-p", "-p"], [0, 6, 1, "cmdoption-runoak-similarity-pair-arg-TERMS", "TERMS"]], "runoak-similarity": [[0, 6, 1, "cmdoption-runoak-similarity-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-similarity-information-content-file", "--information-content-file"], [0, 6, 1, "cmdoption-runoak-similarity-main-score-field", "--main-score-field"], [0, 6, 1, "cmdoption-runoak-similarity-min-ancestor-information-content", "--min-ancestor-information-content"], [0, 6, 1, "cmdoption-runoak-similarity-min-jaccard-similarity", "--min-jaccard-similarity"], [0, 6, 1, "cmdoption-runoak-similarity-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-similarity-o", "--output"], [0, 6, 1, "cmdoption-runoak-similarity-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-similarity-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-similarity-set1-file", "--set1-file"], [0, 6, 1, "cmdoption-runoak-similarity-set2-file", "--set2-file"], [0, 6, 1, "cmdoption-runoak-similarity-O", "-O"], [0, 6, 1, "cmdoption-runoak-similarity-o", "-o"], [0, 6, 1, "cmdoption-runoak-similarity-p", "-p"], [0, 6, 1, "cmdoption-runoak-similarity-arg-TERMS", "TERMS"]], "runoak-singletons": [[0, 6, 1, "cmdoption-runoak-singletons-filter-obsoletes", "--filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-singletons-filter-obsoletes", "--no-filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-singletons-o", "--output"], [0, 6, 1, "cmdoption-runoak-singletons-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-singletons-o", "-o"], [0, 6, 1, "cmdoption-runoak-singletons-p", "-p"]], "runoak-statistics": [[0, 6, 1, "cmdoption-runoak-statistics-X", "--compare-with"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-defined-by", "--group-by-defined-by"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-obo-namespace", "--group-by-obo-namespace"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-prefix", "--group-by-prefix"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-property", "--group-by-property"], [0, 6, 1, "cmdoption-runoak-statistics-P", "--has-prefix"], [0, 6, 1, "cmdoption-runoak-statistics-include-residuals", "--include-residuals"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-defined-by", "--no-group-by-defined-by"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-obo-namespace", "--no-group-by-obo-namespace"], [0, 6, 1, "cmdoption-runoak-statistics-group-by-prefix", "--no-group-by-prefix"], [0, 6, 1, "cmdoption-runoak-statistics-include-residuals", "--no-include-residuals"], [0, 6, 1, "cmdoption-runoak-statistics-o", "--output"], [0, 6, 1, "cmdoption-runoak-statistics-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-statistics-O", "-O"], [0, 6, 1, "cmdoption-runoak-statistics-P", "-P"], [0, 6, 1, "cmdoption-runoak-statistics-X", "-X"], [0, 6, 1, "cmdoption-runoak-statistics-o", "-o"], [0, 6, 1, "cmdoption-runoak-statistics-arg-BRANCHES", "BRANCHES"]], "runoak-subsets": [[0, 6, 1, "cmdoption-runoak-subsets-o", "--output"], [0, 6, 1, "cmdoption-runoak-subsets-o", "-o"]], "runoak-synonymize": [[0, 6, 1, "cmdoption-runoak-synonymize-apply-patch", "--apply-patch"], [0, 6, 1, "cmdoption-runoak-synonymize-apply-patch", "--no-apply-patch"], [0, 6, 1, "cmdoption-runoak-synonymize-o", "--output"], [0, 6, 1, "cmdoption-runoak-synonymize-patch", "--patch"], [0, 6, 1, "cmdoption-runoak-synonymize-R", "--rules-file"], [0, 6, 1, "cmdoption-runoak-synonymize-R", "-R"], [0, 6, 1, "cmdoption-runoak-synonymize-o", "-o"], [0, 6, 1, "cmdoption-runoak-synonymize-arg-TERMS", "TERMS"]], "runoak-taxon-constraints": [[0, 6, 1, "cmdoption-runoak-taxon-constraints-A", "--all"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-direct", "--direct"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-M", "--graph-traversal-method"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-include-redundant", "--include-redundant"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-A", "--no-A"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-A", "--no-all"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-direct", "--no-direct"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-include-redundant", "--no-include-redundant"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-o", "--output"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-A", "-A"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-M", "-M"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-O", "-O"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-o", "-o"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-p", "-p"], [0, 6, 1, "cmdoption-runoak-taxon-constraints-arg-TERMS", "TERMS"]], "runoak-term-categories": [[0, 6, 1, "cmdoption-runoak-term-categories-category-system", "--category-system"], [0, 6, 1, "cmdoption-runoak-term-categories-o", "--output"], [0, 6, 1, "cmdoption-runoak-term-categories-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-term-categories-O", "-O"], [0, 6, 1, "cmdoption-runoak-term-categories-o", "-o"], [0, 6, 1, "cmdoption-runoak-term-categories-arg-TERMS", "TERMS"]], "runoak-term-metadata": [[0, 6, 1, "cmdoption-runoak-term-metadata-additional-metadata", "--additional-metadata"], [0, 6, 1, "cmdoption-runoak-term-metadata-additional-metadata", "--no-additional-metadata"], [0, 6, 1, "cmdoption-runoak-term-metadata-o", "--output"], [0, 6, 1, "cmdoption-runoak-term-metadata-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-term-metadata-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-term-metadata-O", "-O"], [0, 6, 1, "cmdoption-runoak-term-metadata-o", "-o"], [0, 6, 1, "cmdoption-runoak-term-metadata-p", "-p"], [0, 6, 1, "cmdoption-runoak-term-metadata-arg-TERMS", "TERMS"]], "runoak-term-subsets": [[0, 6, 1, "cmdoption-runoak-term-subsets-o", "--output"], [0, 6, 1, "cmdoption-runoak-term-subsets-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-term-subsets-O", "-O"], [0, 6, 1, "cmdoption-runoak-term-subsets-o", "-o"], [0, 6, 1, "cmdoption-runoak-term-subsets-arg-TERMS", "TERMS"]], "runoak-terms": [[0, 6, 1, "cmdoption-runoak-terms-filter-obsoletes", "--filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-terms-filter-obsoletes", "--no-filter-obsoletes"], [0, 6, 1, "cmdoption-runoak-terms-o", "--output"], [0, 6, 1, "cmdoption-runoak-terms-owl-type", "--owl-type"], [0, 6, 1, "cmdoption-runoak-terms-o", "-o"]], "runoak-termset-similarity": [[0, 6, 1, "cmdoption-runoak-termset-similarity-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-termset-similarity-information-content-file", "--information-content-file"], [0, 6, 1, "cmdoption-runoak-termset-similarity-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-termset-similarity-o", "--output"], [0, 6, 1, "cmdoption-runoak-termset-similarity-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-termset-similarity-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-termset-similarity-O", "-O"], [0, 6, 1, "cmdoption-runoak-termset-similarity-o", "-o"], [0, 6, 1, "cmdoption-runoak-termset-similarity-p", "-p"], [0, 6, 1, "cmdoption-runoak-termset-similarity-arg-TERMS", "TERMS"]], "runoak-transform": [[0, 6, 1, "cmdoption-runoak-transform-c", "--config-file"], [0, 6, 1, "cmdoption-runoak-transform-o", "--output"], [0, 6, 1, "cmdoption-runoak-transform-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-transform-t", "--transform"], [0, 6, 1, "cmdoption-runoak-transform-O", "-O"], [0, 6, 1, "cmdoption-runoak-transform-c", "-c"], [0, 6, 1, "cmdoption-runoak-transform-o", "-o"], [0, 6, 1, "cmdoption-runoak-transform-t", "-t"], [0, 6, 1, "cmdoption-runoak-transform-arg-TERMS", "TERMS"]], "runoak-tree": [[0, 6, 1, "cmdoption-runoak-tree-add-mrcas", "--add-mrcas"], [0, 6, 1, "cmdoption-runoak-tree-C", "--configure"], [0, 6, 1, "cmdoption-runoak-tree-D", "--display"], [0, 6, 1, "cmdoption-runoak-tree-down", "--down"], [0, 6, 1, "cmdoption-runoak-tree-gap-fill", "--gap-fill"], [0, 6, 1, "cmdoption-runoak-tree-max-hops", "--max-hops"], [0, 6, 1, "cmdoption-runoak-tree-add-mrcas", "--no-add-mrcas"], [0, 6, 1, "cmdoption-runoak-tree-down", "--no-down"], [0, 6, 1, "cmdoption-runoak-tree-gap-fill", "--no-gap-fill"], [0, 6, 1, "cmdoption-runoak-tree-o", "--output"], [0, 6, 1, "cmdoption-runoak-tree-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-tree-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-tree-root", "--root"], [0, 6, 1, "cmdoption-runoak-tree-skip", "--skip"], [0, 6, 1, "cmdoption-runoak-tree-S", "--stylemap"], [0, 6, 1, "cmdoption-runoak-tree-C", "-C"], [0, 6, 1, "cmdoption-runoak-tree-D", "-D"], [0, 6, 1, "cmdoption-runoak-tree-O", "-O"], [0, 6, 1, "cmdoption-runoak-tree-S", "-S"], [0, 6, 1, "cmdoption-runoak-tree-o", "-o"], [0, 6, 1, "cmdoption-runoak-tree-p", "-p"], [0, 6, 1, "cmdoption-runoak-tree-arg-TERMS", "TERMS"]], "runoak-validate-definitions": [[0, 6, 1, "cmdoption-runoak-validate-definitions-skip-text-annotation", "--no-skip-text-annotation"], [0, 6, 1, "cmdoption-runoak-validate-definitions-o", "--output"], [0, 6, 1, "cmdoption-runoak-validate-definitions-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-validate-definitions-skip-text-annotation", "--skip-text-annotation"], [0, 6, 1, "cmdoption-runoak-validate-definitions-O", "-O"], [0, 6, 1, "cmdoption-runoak-validate-definitions-o", "-o"], [0, 6, 1, "cmdoption-runoak-validate-definitions-arg-TERMS", "TERMS"]], "runoak-validate-mappings": [[0, 6, 1, "cmdoption-runoak-validate-mappings-adapter-mapping", "--adapter-mapping"], [0, 6, 1, "cmdoption-runoak-validate-mappings-autolabel", "--autolabel"], [0, 6, 1, "cmdoption-runoak-validate-mappings-C", "--configuration-file"], [0, 6, 1, "cmdoption-runoak-validate-mappings-autolabel", "--no-autolabel"], [0, 6, 1, "cmdoption-runoak-validate-mappings-o", "--output"], [0, 6, 1, "cmdoption-runoak-validate-mappings-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-validate-mappings-C", "-C"], [0, 6, 1, "cmdoption-runoak-validate-mappings-O", "-O"], [0, 6, 1, "cmdoption-runoak-validate-mappings-o", "-o"], [0, 6, 1, "cmdoption-runoak-validate-mappings-arg-TERMS", "TERMS"]], "runoak-validate-multiple": [[0, 6, 1, "cmdoption-runoak-validate-multiple-cutoff", "--cutoff"], [0, 6, 1, "cmdoption-runoak-validate-multiple-o", "--output"], [0, 6, 1, "cmdoption-runoak-validate-multiple-s", "--schema"], [0, 6, 1, "cmdoption-runoak-validate-multiple-o", "-o"], [0, 6, 1, "cmdoption-runoak-validate-multiple-s", "-s"], [0, 6, 1, "cmdoption-runoak-validate-multiple-arg-DBS", "DBS"]], "runoak-validate": [[0, 6, 1, "cmdoption-runoak-validate-cutoff", "--cutoff"], [0, 6, 1, "cmdoption-runoak-validate-skip-ontology-rules", "--no-skip-ontology-rules"], [0, 6, 1, "cmdoption-runoak-validate-skip-structural-validation", "--no-skip-structural-validation"], [0, 6, 1, "cmdoption-runoak-validate-o", "--output"], [0, 6, 1, "cmdoption-runoak-validate-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-validate-R", "--rule"], [0, 6, 1, "cmdoption-runoak-validate-skip-ontology-rules", "--skip-ontology-rules"], [0, 6, 1, "cmdoption-runoak-validate-skip-structural-validation", "--skip-structural-validation"], [0, 6, 1, "cmdoption-runoak-validate-O", "-O"], [0, 6, 1, "cmdoption-runoak-validate-R", "-R"], [0, 6, 1, "cmdoption-runoak-validate-o", "-o"], [0, 6, 1, "cmdoption-runoak-validate-arg-TERMS", "TERMS"]], "runoak-viz": [[0, 6, 1, "cmdoption-runoak-viz-add-mrcas", "--add-mrcas"], [0, 6, 1, "cmdoption-runoak-viz-C", "--configure"], [0, 6, 1, "cmdoption-runoak-viz-down", "--down"], [0, 6, 1, "cmdoption-runoak-viz-gap-fill", "--gap-fill"], [0, 6, 1, "cmdoption-runoak-viz-max-hops", "--max-hops"], [0, 6, 1, "cmdoption-runoak-viz-meta", "--meta"], [0, 6, 1, "cmdoption-runoak-viz-add-mrcas", "--no-add-mrcas"], [0, 6, 1, "cmdoption-runoak-viz-down", "--no-down"], [0, 6, 1, "cmdoption-runoak-viz-gap-fill", "--no-gap-fill"], [0, 6, 1, "cmdoption-runoak-viz-meta", "--no-meta"], [0, 6, 1, "cmdoption-runoak-viz-view", "--no-view"], [0, 6, 1, "cmdoption-runoak-viz-o", "--output"], [0, 6, 1, "cmdoption-runoak-viz-O", "--output-type"], [0, 6, 1, "cmdoption-runoak-viz-p", "--predicates"], [0, 6, 1, "cmdoption-runoak-viz-S", "--stylemap"], [0, 6, 1, "cmdoption-runoak-viz-view", "--view"], [0, 6, 1, "cmdoption-runoak-viz-C", "-C"], [0, 6, 1, "cmdoption-runoak-viz-O", "-O"], [0, 6, 1, "cmdoption-runoak-viz-S", "-S"], [0, 6, 1, "cmdoption-runoak-viz-o", "-o"], [0, 6, 1, "cmdoption-runoak-viz-p", "-p"], [0, 6, 1, "cmdoption-runoak-viz-arg-TERMS", "TERMS"]], "runoak": [[0, 6, 1, "cmdoption-runoak-a", "--add"], [0, 6, 1, "cmdoption-runoak-g", "--associations"], [0, 6, 1, "cmdoption-runoak-G", "--associations-type"], [0, 6, 1, "cmdoption-runoak-autosave", "--autosave"], [0, 6, 1, "cmdoption-runoak-import-depth", "--import-depth"], [0, 6, 1, "cmdoption-runoak-i", "--input"], [0, 6, 1, "cmdoption-runoak-I", "--input-type"], [0, 6, 1, "cmdoption-runoak-merge", "--merge"], [0, 6, 1, "cmdoption-runoak-metamodel-mappings", "--metamodel-mappings"], [0, 6, 1, "cmdoption-runoak-named-prefix-map", "--named-prefix-map"], [0, 6, 1, "cmdoption-runoak-autosave", "--no-autosave"], [0, 6, 1, "cmdoption-runoak-merge", "--no-merge"], [0, 6, 1, "cmdoption-runoak-profile", "--no-profile"], [0, 6, 1, "cmdoption-runoak-q", "--no-quiet"], [0, 6, 1, "cmdoption-runoak-stacktrace", "--no-stacktrace"], [0, 6, 1, "cmdoption-runoak-other-languages", "--other-languages"], [0, 6, 1, "cmdoption-runoak-l", "--preferred-language"], [0, 6, 1, "cmdoption-runoak-prefix", "--prefix"], [0, 6, 1, "cmdoption-runoak-profile", "--profile"], [0, 6, 1, "cmdoption-runoak-q", "--quiet"], [0, 6, 1, "cmdoption-runoak-requests-cache-db", "--requests-cache-db"], [0, 6, 1, "cmdoption-runoak-save-as", "--save-as"], [0, 6, 1, "cmdoption-runoak-stacktrace", "--stacktrace"], [0, 6, 1, "cmdoption-runoak-v", "--verbose"], [0, 6, 1, "cmdoption-runoak-W", "--wrap-adapter"], [0, 6, 1, "cmdoption-runoak-G", "-G"], [0, 6, 1, "cmdoption-runoak-I", "-I"], [0, 6, 1, "cmdoption-runoak-W", "-W"], [0, 6, 1, "cmdoption-runoak-a", "-a"], [0, 6, 1, "cmdoption-runoak-g", "-g"], [0, 6, 1, "cmdoption-runoak-i", "-i"], [0, 6, 1, "cmdoption-runoak-l", "-l"], [0, 6, 1, "cmdoption-runoak-q", "-q"], [0, 6, 1, "cmdoption-runoak-v", "-v"]]}, "objtypes": {"0": "py:class", "1": "py:method", "2": "py:attribute", "3": "py:module", "4": "py:function", "5": "py:property", "6": "std:cmdoption"}, "objnames": {"0": ["py", "class", "Python class"], "1": ["py", "method", "Python method"], "2": ["py", "attribute", "Python attribute"], "3": ["py", "module", "Python module"], "4": ["py", "function", "Python function"], "5": ["py", "property", "Python property"], "6": ["std", "cmdoption", "program option"]}, "titleterms": {"command": [0, 1103, 1132, 1135, 1136, 1139, 1140, 1144, 1146, 1151, 1152, 1154, 1156, 1159, 1161, 1163, 1169, 1175, 1180], "line": [0, 1103, 1136, 1139, 1140, 1144, 1146, 1151, 1152, 1154, 1156, 1159, 1161, 1163, 1169, 1175, 1180], "gener": [0, 2, 1105, 1116, 1117], "guidelin": [0, 2], "common": 0, "pattern": [0, 2, 1116], "term": [0, 292, 368, 544, 945, 1103, 1132], "list": [0, 236, 1103], "predic": [0, 76, 184, 288, 355, 651, 960, 961, 1080, 1132], "runoak": 0, "alias": [0, 214, 215, 384, 389, 396, 397, 408, 436, 444, 446, 450, 463, 465, 475, 476, 491, 525, 544, 581, 784, 1110], "exampl": [0, 234, 247, 1103, 1105, 1113, 1120, 1129, 1133, 1135, 1138, 1139, 1140, 1143, 1152, 1154, 1156, 1161, 1162, 1163, 1170, 1178, 1186], "ancestor": [0, 1107, 1120, 1132, 1138], "annot": [0, 389, 396, 482, 557, 850, 852, 858, 859, 860, 863, 864, 865, 871, 872, 873, 876, 877, 879, 886, 889, 890, 891, 892, 893, 895, 896, 897, 899, 901, 902, 907, 914, 915, 918, 999, 1004, 1027, 1105, 1111, 1119, 1126, 1132, 1154, 1156, 1161, 1184], "appli": [0, 1139, 1163], "warn": 0, "obsolet": [0, 1118, 1196], "taxon": [0, 943, 956, 969, 970, 1194], "constraint": [0, 956, 970], "associ": [0, 3, 31, 32, 46, 1111, 1169], "count": 0, "matrix": 0, "axiom": [0, 1, 375, 488, 1118], "cach": [0, 1108], "clear": 0, "l": 0, "definit": [0, 429, 578, 1116, 1126], "descend": 0, "diff": [0, 164, 165], "via": [0, 1126], "map": [0, 1, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1113, 1117, 1126, 1152, 1156, 1161, 1175], "disjoint": 0, "dump": 0, "enrich": [0, 120, 127, 1161, 1171], "expand": 0, "subset": [0, 1, 46, 127, 165, 236, 281, 335, 440, 467, 480, 481, 502, 503, 504, 531, 532, 543, 616, 720, 783, 885, 956, 1004, 1070, 1182, 1192], "extract": 0, "fill": 0, "tabl": [0, 1130], "lexic": [0, 281, 282, 337, 1103, 1105, 1190], "replac": [0, 361], "logic": [0, 1116, 1118], "synonym": [0, 291, 325, 366, 367, 470, 665, 1107, 1110], "info": [0, 1005, 1071], "inform": [0, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1121], "content": [0, 204, 1106, 1114, 1121, 1123, 1130, 1131, 1146, 1155, 1168, 1174], "label": [0, 1, 149, 167, 442, 628, 787, 888, 957, 1103, 1119, 1196], "languag": [0, 629, 1110, 1112, 1126], "leaf": 0, "lexmatch": 0, "lint": 0, "migrat": 0, "curi": [0, 1, 6, 97, 137, 206, 254, 299, 378, 493, 681, 748, 821, 926, 974, 1032, 1103, 1113, 1196], "normal": 0, "ontologi": [0, 1, 164, 165, 536, 537, 616, 838, 900, 1103, 1105, 1107, 1108, 1112, 1119, 1127, 1130, 1138, 1139, 1143, 1158, 1170, 1186, 1189, 1192, 1196], "metadata": [0, 537, 616, 1110, 1118, 1127, 1196], "version": [0, 477, 920, 1127], "path": 0, "prefix": [0, 1, 358, 455, 456, 479, 512, 905, 939, 943, 1113], "queri": [0, 1103, 1105, 1113, 1116, 1132], "relationship": [0, 1, 289, 360, 1120, 1134, 1196], "rollup": 0, "root": 0, "search": [0, 720, 738, 1105, 1110, 1132, 1152, 1167, 1180, 1197], "set": [0, 1103], "apikei": 0, "sibl": 0, "similar": [0, 783, 804, 1121, 1181], "pair": 0, "singleton": 0, "statist": [0, 885, 913, 1107, 1132, 1138, 1183], "see": [0, 374, 403, 416, 421, 437, 439, 463, 480, 481, 498, 599, 1103, 1166], "also": [0, 374, 403, 416, 421, 437, 439, 463, 480, 481, 498, 599, 1166], "categori": [0, 163, 230, 560, 710, 1000, 1065], "termset": 0, "transform": [0, 293, 370], "tree": [0, 1132], "valid": [0, 479, 512, 939, 943, 1070, 1116, 1126, 1127, 1138, 1156, 1185], "note": [0, 640, 1120, 1159], "multipl": [0, 1127], "viz": 0, "concept": [1, 1112, 1121, 1133, 1134], "element": [1, 278, 332], "import": [1, 614], "within": 1, "uri": [1, 28, 115, 161, 227, 276, 329, 418, 550, 705, 771, 846, 947, 997, 1059, 1113, 1196], "identifi": [1, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1113], "edg": [1, 387, 434, 1119, 1120], "format": [1, 1105, 1107, 1108, 1112, 1149], "statement": 1, "name": [1, 243, 284, 345], "contribut": [2, 1104, 1105], "report": [2, 956, 1052], "issu": [2, 1129], "give": 2, "feedback": 2, "document": [2, 1130, 1151, 1159, 1168], "code": [2, 1103, 1133, 1135, 1152, 1154, 1156, 1157, 1158, 1160, 1161, 1162, 1164, 1165, 1166, 1167], "understand": [2, 1108], "design": [2, 1102, 1103, 1116], "us": [2, 1102, 1103, 1105, 1108, 1110, 1116, 1120, 1126, 1127, 1132, 1169, 1175], "pleas": 2, "make": [2, 1103], "pull": 2, "request": 2, "all": [2, 1105], "alwai": 2, "write": [2, 1129], "test": [2, 326, 369, 1129], "how": [2, 1103, 1104, 1105, 1107, 1108, 1123, 1126, 1127, 1129, 1136], "plugin": [2, 1126, 1129, 1137], "new": [2, 1129, 1133], "subcommand": 2, "notebook": [2, 1142], "add": 2, "adapt": [2, 1126, 1151, 1152, 1153, 1154, 1156, 1157, 1158, 1159, 1160, 1161, 1162, 1163, 1164, 1165, 1166, 1167, 1186], "implement": [2, 1121, 1129, 1143, 1155, 1167], "util": [2, 1187, 1188, 1189, 1190, 1191, 1192, 1193, 1194, 1195], "function": [2, 1186], "datamodel": [2, 127, 204, 335, 340, 440, 720, 738, 885, 956, 1004, 1070, 1137, 1180, 1191, 1197], "releas": [2, 1129], "pypi": [2, 1129, 1132], "class": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 36, 37, 43, 44, 45, 46, 47, 48, 49, 50, 51, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 155, 159, 163, 165, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 214, 215, 219, 225, 229, 230, 231, 232, 233, 234, 235, 236, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 278, 279, 280, 281, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 331, 332, 333, 334, 335, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 524, 525, 529, 530, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 562, 563, 564, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 576, 578, 579, 580, 581, 582, 583, 585, 586, 587, 588, 589, 590, 591, 592, 594, 595, 596, 597, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 630, 638, 639, 640, 641, 647, 648, 649, 650, 651, 652, 655, 658, 660, 661, 662, 663, 664, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 680, 695, 696, 698, 699, 707, 708, 709, 710, 711, 712, 713, 714, 719, 720, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 764, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 802, 803, 804, 805, 806, 807, 808, 809, 810, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 866, 867, 868, 869, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 882, 883, 884, 885, 886, 888, 889, 890, 891, 892, 893, 895, 896, 897, 898, 899, 900, 901, 902, 904, 905, 906, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1058, 1061, 1062, 1063, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1145, 1171], "inherit": [3, 17, 22, 39, 40, 47, 48, 49, 50, 51, 52, 54, 55, 56, 61, 62, 64, 68, 69, 70, 71, 72, 76, 77, 82, 83, 89, 168, 169, 170, 172, 173, 175, 177, 178, 179, 183, 187, 188, 190, 191, 193, 195, 196, 198, 201, 251, 266, 267, 296, 311, 312, 375, 376, 383, 384, 385, 388, 396, 406, 408, 414, 420, 479, 483, 484, 485, 486, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 524, 525, 530, 533, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 591, 592, 593, 594, 595, 596, 598, 599, 600, 601, 602, 603, 604, 606, 607, 611, 612, 613, 617, 618, 619, 628, 629, 630, 631, 632, 634, 635, 636, 637, 638, 644, 646, 647, 648, 649, 650, 652, 653, 654, 655, 656, 657, 659, 661, 662, 663, 664, 665, 667, 668, 669, 671, 673, 675, 676, 677, 764, 768, 769, 775, 780, 781, 784, 785, 786, 797, 801, 802, 803, 807, 811, 812, 814, 827, 830, 831, 841, 843, 845, 850, 851, 852, 858, 861, 862, 863, 864, 870, 871, 872, 873, 876, 880, 881, 886, 889, 893, 895, 896, 897, 899, 901, 902, 906, 908, 911, 912, 914, 918, 919, 939, 942, 943, 945, 991, 1031, 1038, 1043, 1044, 1046, 1050, 1051, 1052, 1053, 1062, 1063], "slot": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 117, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 231, 232, 233, 234, 235, 236, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 281, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 328, 331, 332, 333, 334, 335, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 407, 408, 409, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 491, 492, 500, 502, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 521, 522, 523, 524, 525, 529, 530, 531, 532, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 680, 688, 695, 696, 697, 698, 699, 701, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 764, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1054, 1058, 1061, 1062, 1063, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100], "usag": [3, 23, 24, 41, 42, 95, 155, 166, 167, 175, 181, 184, 193, 198, 199, 214, 219, 225, 252, 264, 266, 267, 271, 297, 309, 311, 312, 313, 318, 319, 321, 325, 326, 376, 383, 385, 387, 388, 389, 391, 396, 397, 399, 405, 406, 413, 414, 415, 420, 479, 482, 483, 484, 487, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 515, 524, 525, 529, 535, 536, 538, 539, 540, 543, 545, 633, 680, 696, 698, 746, 767, 768, 816, 818, 820, 827, 828, 830, 838, 841, 842, 845, 939, 942, 943, 944, 981, 991, 994, 1031, 1046, 1050, 1053, 1058, 1061, 1063, 1103, 1136, 1146, 1151], "schema": [3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 232, 234, 235, 237, 239, 240, 241, 242, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 359, 360, 361, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 713, 714, 715, 716, 717, 718, 719, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1127], "sourc": [3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 817, 818, 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1111], "linkml": [3, 4, 17, 20, 21, 22, 23, 24, 30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 94, 95, 96, 111, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 142, 150, 155, 159, 163, 166, 167, 168, 169, 170, 172, 173, 175, 176, 177, 178, 179, 181, 182, 183, 184, 185, 186, 187, 188, 190, 191, 193, 194, 195, 196, 198, 199, 200, 201, 214, 215, 216, 219, 225, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 251, 252, 264, 265, 266, 267, 271, 275, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 328, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 400, 405, 406, 407, 408, 409, 413, 414, 415, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 498, 500, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 521, 522, 523, 524, 525, 529, 530, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 679, 680, 688, 695, 696, 697, 698, 699, 701, 707, 708, 709, 710, 711, 712, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 746, 764, 767, 768, 769, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 882, 883, 884, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 925, 939, 942, 943, 944, 945, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 981, 991, 992, 993, 994, 996, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1054, 1058, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100], "direct": [3, 4, 17, 20, 21, 22, 23, 24, 94, 95, 96, 124, 155, 159, 214, 215, 219, 225, 251, 252, 264, 265, 266, 267, 271, 296, 297, 309, 310, 311, 312, 313, 314, 318, 319, 321, 322, 325, 326, 375, 376, 383, 384, 385, 387, 388, 389, 391, 392, 396, 397, 399, 405, 406, 408, 413, 414, 415, 420, 479, 482, 483, 484, 485, 486, 487, 488, 491, 492, 500, 505, 506, 507, 508, 509, 510, 511, 512, 515, 524, 525, 529, 533, 535, 536, 538, 539, 540, 543, 544, 545, 548, 680, 695, 696, 698, 699, 746, 764, 767, 768, 769, 816, 818, 819, 820, 827, 828, 830, 831, 838, 841, 842, 843, 845, 939, 942, 943, 944, 945, 981, 991, 992, 993, 994, 1031, 1038, 1043, 1044, 1046, 1049, 1050, 1051, 1052, 1053, 1058, 1061, 1062, 1063, 1120], "associationchang": 4, "comment": [4, 6, 19, 28, 37, 61, 78, 86, 97, 109, 115, 137, 153, 161, 206, 215, 222, 227, 230, 254, 270, 276, 299, 317, 329, 356, 378, 385, 389, 392, 402, 408, 418, 425, 427, 434, 437, 444, 455, 463, 493, 510, 534, 550, 563, 566, 578, 599, 606, 628, 668, 681, 694, 705, 740, 748, 763, 771, 788, 821, 828, 837, 846, 892, 904, 926, 938, 947, 951, 959, 968, 974, 987, 997, 1032, 1048, 1059], "type": [5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 18, 19, 25, 26, 27, 28, 29, 46, 93, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 112, 113, 114, 115, 116, 127, 136, 137, 138, 139, 140, 141, 143, 144, 145, 146, 147, 148, 149, 151, 152, 153, 156, 157, 158, 160, 161, 162, 165, 202, 205, 206, 207, 208, 209, 210, 211, 212, 213, 217, 218, 220, 221, 222, 223, 224, 226, 227, 228, 236, 247, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 268, 269, 270, 272, 273, 274, 276, 277, 281, 294, 295, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 315, 316, 317, 320, 323, 324, 327, 329, 330, 335, 372, 373, 377, 378, 379, 380, 381, 382, 386, 390, 393, 394, 395, 398, 401, 402, 403, 411, 412, 416, 417, 418, 419, 421, 440, 471, 472, 489, 490, 493, 494, 495, 496, 497, 499, 501, 516, 517, 518, 519, 520, 526, 527, 528, 534, 541, 542, 546, 547, 549, 550, 551, 616, 671, 672, 678, 681, 682, 683, 684, 685, 686, 687, 689, 690, 691, 692, 693, 694, 700, 702, 703, 704, 705, 706, 720, 744, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 765, 766, 770, 771, 772, 773, 783, 813, 817, 821, 822, 823, 824, 825, 826, 829, 832, 833, 834, 835, 836, 837, 839, 840, 844, 846, 847, 885, 917, 924, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 940, 941, 946, 947, 948, 956, 973, 974, 975, 976, 977, 978, 979, 980, 982, 983, 984, 985, 986, 987, 988, 989, 990, 995, 997, 998, 1004, 1029, 1030, 1032, 1033, 1034, 1035, 1036, 1037, 1039, 1040, 1041, 1042, 1045, 1047, 1048, 1055, 1056, 1057, 1059, 1060, 1070, 1096, 1098], "boolean": [5, 93, 136, 205, 253, 298, 377, 489, 678, 747, 817, 924, 973, 1030, 1103, 1197], "date": [7, 40, 98, 138, 207, 255, 300, 379, 494, 575, 682, 749, 822, 927, 975, 1033, 1108], "dateordatetim": [8, 99, 139, 208, 256, 301, 380, 495, 683, 750, 823, 928, 976, 1034], "datetim": [9, 100, 140, 209, 257, 302, 381, 496, 684, 751, 824, 929, 977, 1035], "decim": [10, 101, 141, 210, 258, 303, 382, 497, 685, 752, 825, 930, 978, 1036], "doubl": [11, 102, 143, 211, 259, 304, 386, 499, 686, 753, 826, 931, 979, 1037], "float": [12, 103, 145, 212, 260, 305, 390, 501, 687, 754, 829, 932, 980, 1039], "integ": [13, 104, 146, 213, 261, 306, 393, 516, 689, 755, 832, 933, 982, 1040], "jsonpath": [14, 105, 147, 217, 262, 307, 394, 518, 690, 757, 833, 934, 983, 1041], "jsonpoint": [15, 106, 148, 218, 263, 308, 395, 519, 691, 758, 834, 935, 984, 1042], "ncname": [16, 107, 151, 220, 268, 315, 398, 527, 692, 759, 835, 936, 985, 1045], "negatedassoci": 17, "nodeidentifi": [18, 108, 152, 221, 269, 316, 401, 528, 693, 761, 836, 937, 986, 1047], "objectidentifi": [19, 109, 153, 222, 270, 317, 402, 534, 694, 763, 837, 938, 987, 1048], "pairwisecoassoci": 20, "parserconfigur": 21, "positiveornegativeassoci": 22, "propertyvalu": [23, 408], "rollupgroup": 24, "sparqlpath": [25, 112, 157, 223, 272, 323, 411, 541, 702, 765, 839, 940, 989, 1055], "string": [26, 113, 158, 224, 273, 324, 412, 542, 703, 766, 840, 941, 990, 1056], "time": [27, 114, 160, 226, 274, 327, 417, 547, 704, 770, 844, 946, 995, 1057], "uriorcuri": [29, 116, 162, 228, 277, 330, 419, 551, 706, 772, 847, 948, 998, 1060], "aggregator_knowledge_sourc": 30, "applic": [30, 32, 33, 34, 36, 37, 43, 44, 45, 47, 48, 49, 50, 51, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 163, 168, 169, 170, 172, 173, 176, 177, 178, 179, 182, 183, 185, 186, 187, 188, 190, 191, 194, 195, 196, 200, 201, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 422, 423, 424, 425, 426, 427, 428, 429, 430, 432, 433, 434, 435, 436, 437, 438, 439, 441, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 463, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 513, 514, 530, 552, 553, 554, 555, 556, 557, 558, 559, 560, 562, 563, 564, 565, 566, 567, 569, 570, 571, 572, 573, 574, 575, 576, 578, 579, 580, 581, 582, 583, 585, 586, 587, 588, 589, 590, 591, 592, 594, 595, 596, 597, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 630, 638, 639, 640, 641, 647, 648, 649, 650, 651, 652, 655, 658, 660, 661, 662, 663, 664, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 707, 708, 709, 710, 711, 712, 713, 714, 719, 721, 722, 723, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 774, 775, 776, 777, 778, 779, 780, 781, 782, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 802, 803, 804, 805, 806, 807, 808, 809, 810, 848, 849, 850, 851, 852, 857, 858, 859, 860, 863, 864, 866, 867, 868, 869, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 882, 883, 884, 886, 888, 889, 890, 891, 892, 893, 895, 896, 897, 898, 899, 900, 901, 902, 904, 905, 906, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100], "properti": [30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 117, 118, 119, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 163, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 229, 230, 231, 232, 233, 234, 235, 237, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 278, 279, 280, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 331, 332, 333, 334, 336, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 473, 474, 475, 476, 477, 478, 513, 514, 521, 522, 523, 530, 538, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 673, 674, 675, 676, 677, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 739, 740, 741, 742, 743, 774, 775, 776, 777, 778, 779, 780, 781, 782, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 809, 810, 811, 812, 814, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 914, 915, 916, 918, 919, 920, 921, 922, 923, 949, 950, 951, 952, 953, 954, 955, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 971, 972, 999, 1000, 1001, 1002, 1003, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1028, 1065, 1066, 1067, 1068, 1069, 1071, 1072, 1073, 1074, 1075, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1099, 1100, 1119], "associations_for_subjects_in_common": 33, "closure_delta": 34, "closure_information_content_delta": 35, "closure_pred": 36, "core_tripl": 38, "creation_d": [39, 571], "denormalized_slot": 41, "mixin": [41, 42, 166, 167, 175, 181, 184, 193, 198, 199, 484, 492, 500, 505, 506, 507, 508, 509, 510, 511, 529, 535, 539, 540, 633, 981], "diff_slot": 42, "evidence_typ": 43, "group_object": 44, "include_association_attribut": 45, "oak": [46, 1102, 1103, 1105, 1110, 1111, 1112, 1114, 1116, 1117, 1126, 1130, 1132, 1168, 1196], "data": [46, 236, 1102, 1110, 1111, 1121, 1175], "model": [46, 236, 1011, 1102, 1110, 1111, 1116, 1121, 1126, 1166, 1175], "enumer": [46, 127, 165, 236, 281, 335, 440, 616, 720, 783, 885, 956, 1004, 1070], "is_creat": 47, "is_delet": 48, "is_gener": 49, "is_migr": 50, "is_speci": 51, "modification_d": 52, "negat": 53, "new_dat": 54, "new_object": 55, "new_pred": 56, "number_subject_unique_to_entity1": 57, "number_subject_unique_to_entity2": 58, "number_subjects_in_common": 59, "number_subjects_in_union": 60, "object": [61, 181, 641, 1076], "object1": 62, "object1_label": 63, "object2": 64, "object2_label": 65, "object_closur": 66, "object_closure_label": 67, "object_label": [68, 729, 798, 1015], "old_dat": 69, "old_object": 70, "old_object_obsolet": 71, "old_pred": 72, "original_object": 73, "original_pred": 74, "original_subject": 75, "predicate_label": 77, "preserve_negated_associ": 78, "primary_knowledge_sourc": 79, "property_valu": 80, "proportion_subjects_in_common": 81, "publication_is_ad": 82, "publication_is_delet": 83, "public": 84, "sub_group": 85, "subject": [86, 199, 968, 1089], "subject_closur": 87, "subject_closure_label": 88, "subject_label": [89, 808, 1022], "subjects_in_common": 90, "summary_group": 91, "supporting_object": 92, "classenrichmentconfigur": 94, "classenrichmentresult": 95, "classenrichmentresultset": 96, "posit": [110, 154, 245, 988], "enum": [111, 142, 150, 216, 275, 328, 400, 407, 409, 498, 679, 688, 697, 701, 925, 996, 1054, 1064], "sortfieldenum": 111, "permiss": [111, 142, 150, 216, 275, 328, 400, 404, 407, 409, 410, 498, 679, 688, 697, 701, 925, 996, 1054, 1064], "valu": [111, 142, 150, 216, 275, 328, 400, 404, 407, 409, 410, 498, 679, 688, 697, 701, 925, 996, 1054, 1064], "ancestor_of_more_informative_result": 117, "background_count": 118, "background_tot": 119, "class_id": 121, "class_label": 122, "descendant_of_more_informative_result": 123, "false_discovery_r": 125, "fold_enrich": 126, "p_valu": 128, "p_value_adjust": 129, "p_value_cutoff": 130, "probabl": 131, "rank": [132, 735], "result": [133, 185, 737, 1053, 1070, 1085, 1101, 1103, 1132], "sample_count": 134, "sample_tot": 135, "diffcategori": 142, "entityrefer": 144, "mappingcardinalityenum": 150, "relationaldiff": 155, "structurediffresultset": 159, "cross": [164, 165, 1117], "is_funct": 166, "left_object_id": 168, "left_object_is_funct": 169, "left_object_label": 170, "left_object_nam": 171, "left_predicate_id": 172, "left_predicate_label": 173, "left_predicate_nam": 174, "left_sid": 175, "left_sourc": 176, "left_subject_id": 177, "left_subject_is_funct": 178, "left_subject_label": 179, "left_subject_nam": 180, "object_mapping_cardin": 182, "object_mapping_pred": 183, "right_intermediate_id": 186, "right_object_id": 187, "right_object_label": 188, "right_object_nam": 189, "right_predicate_id": 190, "right_predicate_label": 191, "right_predicate_nam": 192, "right_sid": 193, "right_sourc": 194, "right_subject_id": 195, "right_subject_label": 196, "right_subject_nam": 197, "side": 198, "subject_mapping_cardin": 200, "subject_mapping_pred": 201, "funowl": [203, 1153, 1186], "itemlist": [214, 238, 240], "itemlistcollect": 215, "itemlistordertyp": 216, "listitem": 219, "thing": [225, 545], "additionaltyp": 229, "descript": [231, 331, 874, 953], "elementid": 232, "id": [233, 439, 479, 512, 611, 782, 884, 939, 943, 955, 1002, 1069, 1103], "idtyp": 234, "item": [236, 237], "itemlistel": 239, "itemmetadatamap": 241, "keyword": 242, "numberofitem": 244, "previousitem": 246, "url": [248, 674, 1099], "wasgeneratedbi": 249, "kgcl": [250, 1139, 1163], "activ": [251, 296], "ani": [252, 297, 487, 1105, 1118], "lexicalgroup": [264, 309], "lexicalindex": [265, 310], "lexicaltransform": [266, 311], "lexicaltransformationpipelin": [267, 312], "relationshiptoterm": [271, 321], "transformationtyp": [275, 328, 996], "element_term": [279, 333], "group": [280, 334], "index": [281, 282, 283, 337, 338], "lexican": [283, 338], "param": [285, 350], "pipelin": [286, 287, 351, 352], "mappingrul": 313, "mappingrulecollect": 314, "postcondit": [318, 353], "precondit": [319, 354], "regularexpressionstr": 320, "ruleset": 322, "rule": [335, 339, 340, 362], "input": [336, 1103, 1162], "mapping_source_one_of": 341, "match": [342, 632], "match_scop": 343, "minimum_confid": 344, "object_match_field_one_of": 346, "object_source_one_of": 347, "onewai": 348, "output": 349, "predicate_id": [356, 1018, 1081], "predicate_id_one_of": 357, "qualifi": 359, "subject_match_field_one_of": 364, "subject_source_one_of": 365, "transformations_included_in": 371, "weight": 374, "basicpropertyvalu": [376, 423], "definitionpropertyvalu": 383, "disjointclassexpressionsaxiom": [384, 431], "domainrangeaxiom": [385, 433], "equivalentnodesset": [388, 435], "existentialrestrictionexpress": 389, "graph": [391, 438, 1103, 1105, 1110, 1116, 1120, 1132, 1136, 1146, 1147, 1148, 1149, 1150, 1157, 1179, 1188, 1189], "graphdocu": 392, "logicaldefinitionaxiom": [396, 445], "meta": [397, 446], "node": [399, 449, 1046], "nodetypeenum": 400, "oboidentifierstr": 403, "predsenum": 404, "prefixdeclar": 405, "propertychainaxiom": [406, 457, 652], "propertytypeenum": 407, "scopeenum": 409, "scopesenum": 410, "subsetdefinit": [413, 466], "synonympropertyvalu": 414, "synonymtypedefinit": [415, 469], "synonymtypeidentifierstr": 416, "xrefpropertyvalu": 420, "xrefstr": 421, "allvaluesfromedg": 422, "chainpredicateid": 424, "classexpress": [425, 492], "classid": 426, "definedclassid": 428, "deprec": [430, 581], "domainclassid": 432, "fillerid": 436, "genusid": 437, "obograph": [440, 1135, 1176, 1191], "isexact": 441, "lang": 443, "lbl": 444, "namespac": 447, "nodeid": 448, "obj": 450, "obographs_datamodel": 451, "obographs_linkml_model": 452, "pred": 453, "predicateid": 454, "propertyid": 458, "propertytyp": 459, "rangeclassid": 460, "representativenodeid": 461, "representitivenodeid": 462, "restrict": [463, 540], "scope": 464, "sub": 465, "synonymtyp": 468, "unionequivalentto": 473, "unionequivalenttoexpress": 474, "val": 475, "valtyp": 476, "xref": 478, "agent": [479, 816, 849], "allotropepermittedprofil": 480, "allotroperequiredprofil": 481, "annotationproperti": 483, "annotationpropertymixin": 484, "anonym": 485, "anonymousclassexpress": 486, "curieliter": 490, "definitionconstraintcompon": 498, "express": 500, "gopermittedprofil": 502, "gorecommendedprofil": 503, "gorequiredprofil": 504, "hascategori": 505, "haslifecycl": 506, "hasmap": 507, "hasminimalmetadata": 508, "hasproven": 509, "hassynonym": 510, "hasuserinform": 511, "homosapien": 512, "iedb_alternative_term": 513, "isa_alternative_term": 514, "imag": [515, 612], "irityp": 517, "labeltyp": 520, "ncit_definition_sourc": 521, "ncit_term_sourc": 522, "ncit_term_typ": 523, "namedindividu": 524, "namedobject": 525, "narrativetext": 526, "notobsoleteaspect": 529, "obo_foundry_unique_label": 530, "todo": [530, 552, 555, 556, 564, 571, 579, 583, 585, 588, 598, 606, 618, 619, 652, 655, 657, 658, 662, 669, 696, 774, 960, 1050, 1062], "obipermittedprofil": 531, "obirequiredprofil": 532, "objectproperti": 533, "obsoleteaspect": 535, "propertyexpress": 539, "tidystr": 546, "transitiveproperti": 548, "urlliter": 549, "allvaluesfrom": 552, "alternative_term": 553, "annotatedproperti": 554, "annotatedsourc": 555, "annotatedtarget": 556, "broadmatch": 558, "cardin": 559, "changenot": 561, "closematch": 562, "complementof": 564, "conformsto": 565, "consid": 566, "contributor": 567, "core_properti": 568, "creat": [569, 1129, 1133], "created_bi": 570, "creator": 572, "curator_not": 573, "database_cross_refer": 574, "date_retriev": 576, "defaultlanguag": 577, "definition_sourc": 579, "depicted_bi": 580, "disconnected_from": 582, "disjointwith": 583, "distinctmemb": 584, "domain": 585, "editor_not": 586, "editor_preferred_term": 587, "equivalentclass": 588, "equivalentproperti": 589, "evid": 590, "exactmatch": 591, "example_of_usag": 592, "excluded_axiom": 593, "excluded_from_qc_check": 594, "excluded_subclassof": 595, "excluded_synonym": 596, "external_ontologi": 597, "hasvalu": 598, "has_alternative_id": 599, "has_axiom_label": 600, "has_broad_synonym": 601, "has_curation_statu": 602, "has_exact_synonym": 603, "has_narrow_synonym": 604, "has_obo_namespac": 605, "has_obsolescence_reason": 606, "has_ontology_root_term": 607, "has_rank": 608, "has_related_synonym": 609, "has_synonym_typ": 610, "imported_from": 613, "in_subset": 615, "informative_properti": 617, "intersectionof": 618, "inverseof": 619, "isdefinedbi": 620, "is_a_defining_property_chain_axiom": 621, "is_a_defining_property_chain_axiom_where_second_argument_is_reflex": 622, "is_class_level": 623, "is_cycl": 624, "is_inf": 625, "is_metadata_tag": 626, "is_transit": 627, "licens": 630, "logical_pred": 631, "match_aspect": 633, "maxqualifiedcardin": 634, "member": 635, "mincardin": 636, "minqualifiedcardin": 637, "narrowmatch": 638, "never_in_taxon": 639, "oboinowl_id": 642, "oboinowl_ontologi": 643, "obsoletion_related_properti": 644, "omo": [645, 1196], "onclass": 646, "onproperti": 647, "oneof": 648, "ontology_term_request": 649, "page": 650, "provenance_properti": 653, "qualifiedcardin": 654, "rang": 655, "reification_pred": 656, "samea": 657, "seealso": 658, "shortcut_annotation_properti": 659, "shorthand": 660, "should_conform_to": 661, "somevaluesfrom": 662, "subclassof": 664, "temporal_interpret": 666, "term_editor": 667, "term_replaced_bi": 668, "term_tracker_item": 669, "titl": [670, 916], "unionof": 673, "versioniri": 675, "versioninfo": 676, "version_properti": 677, "booleanoper": 679, "complexqueri": 680, "graphfunct": 688, "pathexpress": 695, "searchbaseconfigur": 696, "searchproperti": 697, "searchresult": 698, "searchresultset": 699, "searchterm": 700, "searchtermsyntax": 701, "all_of": 707, "any_of": 708, "atom": 709, "configur": 711, "cursor": 712, "force_case_insensit": 713, "graph_pred": 714, "include_alias": [715, 1003], "include_definit": 716, "include_id": 717, "include_label": 718, "include_obsoletes_in_result": 719, "is_complet": 721, "is_fuzzi": 722, "is_parti": 723, "is_regular_express": 724, "limit": [725, 1007], "matches_full_search_term": 726, "none_of": 727, "object_id": [728, 796, 1014, 1077], "object_match_field": 730, "object_sourc": [731, 799, 1016], "object_source_vers": 732, "path_to": 733, "result_count": 736, "search_term": [739, 740], "snippet": 741, "syntax": [742, 1186, 1197], "travers": [743, 1120, 1189], "semsql": 745, "bestmatch": 746, "itemcount": 756, "negativelogvalu": 760, "nonnegativefloat": 762, "pairwisesimilar": 764, "terminfo": 767, "termpairwisesimilar": 768, "termsetpairwisesimilar": 769, "zerotoon": 773, "ancestor_id": 774, "ancestor_information_cont": 775, "ancestor_label": 776, "ancestor_sourc": 777, "average_scor": 778, "best_scor": 779, "cosine_similar": 780, "dice_similar": 781, "semant": [783, 1181], "information_cont": 784, "intersection_count": 785, "jaccard_similar": 786, "match_sourc": 788, "match_source_label": 789, "match_subsum": 790, "match_subsumer_label": 791, "match_target": 792, "match_target_label": 793, "metric": 794, "object_best_match": 795, "object_information_cont": 797, "object_termset": 800, "overlap_coeffici": 801, "phenodigm_scor": 802, "score": 803, "subject_best_match": 805, "subject_id": [806, 1090], "subject_information_cont": 807, "subject_sourc": [809, 1023], "subject_termset": 810, "subsumed_by_scor": 811, "subsumes_scor": 812, "union_count": 814, "sssom": [815, 1117, 1132], "changetypestatist": 818, "contributorrol": 819, "contributorstatist": 820, "facetstatist": 827, "specif": [827, 830, 841], "facetedcount": 828, "globalstatist": 830, "groupedstatist": 831, "summarystatisticcollect": 841, "summarystatisticscalculationact": 842, "summarystatisticsreport": 843, "ungroupedstatist": 845, "acted_on_behalf_of": 848, "annotation_property_count": 850, "anonymous_class_expression_count": 851, "anonymous_individual_count": 852, "by_categori": 853, "by_ontologi": 854, "by_subset": 855, "by_taxon": 856, "change_summari": 857, "class_count": 858, "class_count_by_categori": 859, "class_count_by_subset": 860, "class_count_excluding_deprec": 861, "class_count_with_definit": 862, "class_count_with_text_definit": 863, "class_count_without_text_definit": 864, "class_statistic_group": 865, "compared_with": 866, "contributor_id": 867, "contributor_nam": 868, "contributor_summari": 869, "count_statist": 870, "datatype_property_count": 871, "deprecated_class_count": 872, "deprecated_object_property_count": 873, "description_logic_profil": 875, "distinct_synonym_count": 876, "edge_count_by_pred": 877, "ended_at_tim": 878, "entailed_edge_count_by_pred": 879, "equivalent_classes_axiom_count": 880, "equivalentclasses_axiom_count": 881, "facet": 882, "filtered_count": 883, "summari": [885, 913, 1183], "individual_count": 886, "individual_statistic_group": 887, "mapping_count": 889, "mapping_statement_count_by_object_sourc": 890, "mapping_statement_count_by_pred": 891, "mapping_statement_count_subject_by_object_sourc": 892, "merged_class_count": 893, "metadata_statistic_group": 894, "named_individual_count": 895, "non_deprecated_class_count": 896, "non_deprecated_object_property_count": 897, "normalization_com": 898, "object_property_count": 899, "ontology_count": 901, "owl_axiom_count": 902, "owl_statistic_group": 903, "partit": 904, "property_count": 906, "property_statistic_group": 907, "rdf_triple_count": 908, "role_count": 909, "started_at_tim": 910, "subclass_of_axiom_count": 911, "subset_count": 912, "synonym_statement_count": 914, "synonym_statement_count_by_pred": 915, "unsatisfiable_class_count": 918, "untyped_entity_count": 919, "version_info": 921, "was_associated_with": 922, "was_generated_bi": 923, "configurationopt": 925, "predicateterm": 939, "subjectterm": 942, "taxonconstraint": 944, "assert": 949, "candid": 950, "contradicted_bi": 952, "evolutionari": 954, "never_in": 958, "only_in": 959, "present_in": 962, "present_in_ancestor_of": 963, "redund": 964, "redundant_with": 965, "redundant_with_only_in": 966, "unsatisfi": 971, "via_term": 972, "hasspan": 981, "textannot": 991, "textannotationconfigur": 992, "textannotationresultset": 993, "textualel": 994, "confid": [1001, 1066], "text": [1004, 1026, 1027, 1105, 1110, 1184], "is_longest_match": 1006, "match_str": 1008, "match_typ": 1009, "matches_whole_text": 1010, "object_alias": 1012, "object_categori": 1013, "parent_docu": 1017, "source_text": 1019, "subject_end": 1021, "subject_start": 1024, "subject_text_id": 1025, "token_exclusion_list": 1028, "constraintcompon": 1031, "externalreferencevalidationresult": 1038, "mappingvalidationresult": 1043, "namedresourc": 1044, "repairconfigur": 1049, "repairoper": 1050, "repairreport": 1051, "severityopt": 1054, "typeseveritykeyvalu": 1058, "validationconfigur": 1061, "validationreport": 1062, "validationresult": 1063, "validationresulttyp": 1064, "dry_run": 1067, "http_response_cod": 1068, "instanti": 1072, "max_number_results_per_typ": 1073, "modifi": 1074, "number_of_attempt": 1075, "object_info": 1078, "object_str": 1079, "problem": 1082, "prompt_info": 1083, "repair": 1084, "schema_path": 1086, "sever": 1087, "subject_info": 1091, "success": 1092, "suggested_modif": 1093, "suggested_pred": 1094, "time_check": 1095, "type_severity_map": 1097, "validation_configur": 1100, "validaton": 1101, "faq": [1102, 1103, 1104, 1105, 1106, 1107, 1108], "architectur": [1102, 1143], "what": [1102, 1103, 1105, 1107, 1112, 1129], "i": [1102, 1103, 1104, 1105, 1107, 1108, 1112, 1120, 1129], "an": [1102, 1103, 1107, 1112, 1127, 1129, 1138], "interfac": [1102, 1108, 1129, 1135, 1143, 1167, 1169, 1170, 1171, 1172, 1173, 1174, 1175, 1176, 1177, 1178, 1180, 1181, 1184, 1185], "iter": [1102, 1144], "why": [1102, 1103, 1105, 1108, 1112], "doe": [1102, 1103, 1105], "them": [1102, 1107], "so": 1102, "much": 1102, "do": [1103, 1104, 1105, 1107, 1108], "get": [1103, 1108, 1132], "help": [1103, 1105], "more": [1103, 1115, 1120, 1129], "want": [1103, 1108, 1112], "pass": 1103, "option": [1103, 1108], "error": [1103, 1108], "when": 1103, "p": 1103, "mean": 1103, "can": [1103, 1104, 1105], "entiti": [1103, 1113, 1118, 1121, 1196], "combin": [1103, 1197], "chain": [1103, 1132], "togeth": [1103, 1144], "unix": 1103, "style": 1103, "symbol": 1103, "visual": [1103, 1132, 1136], "subgraph": 1103, "over": [1103, 1105], "arch": 1103, "philosophi": 1103, "principl": 1103, "The": [1103, 1114, 1116], "isn": 1103, "t": [1103, 1105, 1108], "work": [1103, 1127, 1132, 1136, 1137, 1188, 1192], "wai": 1103, "expect": 1103, "stai": 1104, "involv": 1104, "ar": 1105, "tutori": [1105, 1131], "runnabl": 1105, "am": 1105, "familiar": 1105, "both": 1105, "python": [1105, 1117, 1133, 1138, 1140], "where": [1105, 1120], "should": [1105, 1118, 1120], "start": [1105, 1132], "find": 1105, "confus": 1105, "guid": [1105, 1114, 1123], "me": 1105, "call": [1105, 1144], "instal": [1105, 1126, 1127, 1132, 1133, 1136], "don": [1105, 1108], "know": 1105, "just": 1105, "bio": 1105, "access": [1105, 1107, 1112, 1130], "portal": [1105, 1196], "matport": 1105, "bioport": [1105, 1108, 1132, 1152, 1186], "triplestor": [1105, 1134], "ontobe": [1105, 1132, 1159, 1186], "ubergraph": [1105, 1121, 1132, 1134, 1167], "local": [1105, 1132], "file": [1105, 1108, 1122, 1132, 1138, 1139, 1162], "obo": [1105, 1107, 1108, 1110, 1116, 1127, 1132, 1139, 1146, 1147, 1148, 1149, 1150, 1157, 1162, 1164], "support": [1105, 1111], "owl": [1105, 1107, 1108, 1116, 1137, 1143, 1150, 1177, 1196], "reason": [1105, 1116, 1120], "we": 1107, "need": 1107, "now": 1107, "have": 1107, "chatgpt": 1107, "": 1107, "troubleshoot": 1108, "No": 1108, "messag": 1108, "api": [1108, 1152], "kei": [1108, 1152], "my": 1108, "won": 1108, "pars": 1108, "take": 1108, "too": 1108, "long": 1108, "load": 1108, "sqlite": [1108, 1127, 1138, 1186], "out": 1108, "method": 1108, "glossari": 1109, "case": [1110, 1119], "mine": 1110, "nlp": 1110, "differ": [1110, 1172], "commun": 1110, "approach": [1110, 1121, 1196], "repres": 1110, "represent": 1110, "simpl": [1110, 1164], "core": [1110, 1112], "hpo": 1110, "basic": [1110, 1112, 1132, 1133, 1134, 1140, 1163, 1170], "full": 1110, "curat": 1111, "background": [1111, 1121], "select": [1111, 1126], "further": [1111, 1113, 1116, 1117, 1118, 1119, 1121], "read": [1111, 1113, 1116, 1117, 1118, 1119, 1121], "would": 1112, "one": [1112, 1129], "standard": [1112, 1118], "prefixmap": [1113, 1196], "non": 1113, "default": [1113, 1121], "structur": 1113, "learn": 1115, "genu": 1116, "differentia": 1116, "form": 1116, "uberon": [1116, 1117], "nail": 1116, "analyz": 1116, "refer": 1117, "In": 1117, "look": [1118, 1119], "up": [1118, 1119], "convent": 1118, "signatur": 1118, "accompani": 1118, "provid": [1118, 1169, 1175], "addit": 1118, "context": 1118, "human": 1118, "machin": 1118, "merg": 1118, "primari": 1119, "custom": 1119, "multilingu": 1119, "other": [1119, 1132, 1138, 1143], "explor": 1120, "relat": [1120, 1179], "strategi": 1120, "entail": 1120, "yield": 1120, "than": 1120, "which": 1120, "A": 1120, "comput": 1121, "between": [1121, 1196], "jaccard": 1121, "aggreg": [1121, 1151], "measur": 1121, "compar": 1121, "vector": 1121, "base": 1121, "semsimian": 1121, "fhir": [1122, 1148], "convers": 1122, "cli": 1122, "config": 1122, "To": 1123, "larg": 1126, "llm": [1126, 1156], "framework": 1126, "ontogpt": 1126, "curategpt": 1126, "talisman": 1126, "conjunct": 1126, "exist": 1126, "tool": 1126, "suggest": 1126, "altern": [1126, 1127], "mixtral": 1126, "ollama": 1126, "litellm": 1126, "groq": 1126, "step": [1127, 1132], "1": [1127, 1132], "obtain": 1127, "2": [1127, 1133], "oaklib": [1127, 1187, 1188, 1189, 1190, 1191, 1192, 1193, 1194], "3": [1127, 1134], "individu": 1127, "caveat": 1127, "your": [1127, 1138], "own": [1127, 1138], "thi": [1127, 1136], "analysi": 1127, "discuss": 1129, "tracker": 1129, "project": [1129, 1133], "selector": [1129, 1162, 1186], "kit": 1130, "indic": 1130, "part": [1132, 1133, 1134, 1135, 1136, 1137, 1138, 1139], "from": [1132, 1146], "run": 1132, "librari": [1132, 1168], "introduct": [1132, 1140], "fetch": [1132, 1138], "abbrevi": 1132, "advanc": 1132, "paramet": 1132, "backend": [1132, 1134], "ontoport": 1132, "ol": [1132, 1158, 1186], "next": 1132, "poetri": 1133, "first": 1133, "extend": 1133, "connect": [1134, 1167], "oper": [1134, 1163], "4": 1135, "5": 1136, "graphviz": 1136, "obographviz": 1136, "programmat": 1136, "6": 1137, "With": [1137, 1138], "owlinterfac": 1137, "robot": [1137, 1163], "7": 1138, "download": 1138, "readi": 1138, "made": 1138, "build": 1138, "docker": 1138, "without": 1138, "rdbmss": 1138, "orm": [1138, 1166], "8": 1139, "chang": 1139, "about": [1139, 1157, 1160, 1162, 1164, 1167, 1196], "sqlite3": 1139, "jupyt": 1142, "partial": 1143, "complet": 1143, "best": 1144, "practic": 1144, "extern": 1144, "servic": [1144, 1158], "weav": 1144, "chunk": 1144, "abstract": 1145, "convert": [1146, 1147, 1148, 1149, 1150], "cx": 1147, "gilda": 1154, "initi": [1157, 1162, 1164, 1166], "lookup": 1158, "owleri": 1160, "pantherdb": 1161, "pronto": [1162, 1186], "templat": 1163, "sparql": 1165, "sql": 1166, "databas": 1166, "alchemi": 1166, "calcul": 1171, "dumper": 1173, "patcher": 1178, "scheme": 1186, "prontolib": 1186, "obosqlit": 1186, "apikey_manag": 1187, "networkx_bridg": 1188, "networkx": 1188, "relationship_walk": 1189, "lexical_index": 1190, "obograph_util": 1191, "slimmer_util": 1192, "slim": 1192, "table_fil": 1193, "layer": 1196, "rdf": 1196, "challeng": 1196}, "envversion": {"sphinx.domains.c": 3, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 9, "sphinx.domains.index": 1, "sphinx.domains.javascript": 3, "sphinx.domains.math": 2, "sphinx.domains.python": 4, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx.ext.viewcode": 1, "sphinx.ext.todo": 2, "sphinx.ext.intersphinx": 1, "sphinx": 60}, "alltitles": {"Command Line": [[0, "command-line"], [1139, "command-line"], [1144, "command-line"], [1159, "command-line"], [1180, "command-line"]], "General Guidelines": [[0, "general-guidelines"]], "Common Patterns": [[0, "common-patterns"]], "Term Lists": [[0, "term-lists"]], "Predicates": [[0, "predicates"]], "Commands": [[0, "commands"], [1135, "commands"]], "runoak": [[0, "runoak"]], "aliases": [[0, "runoak-aliases"]], "Example:": [[0, "example"], [0, "id1"], [0, "id2"], [0, "id3"], [0, "id4"], [0, "id5"], [0, "id6"], [0, "id7"], [0, "id8"], [0, "id9"], [0, "id10"], [0, "id11"], [0, "id12"], [0, "id13"], [0, "id14"], [0, "id15"], [0, "id16"], [0, "id17"], [0, "id18"], [0, "id19"], [0, "id20"], [0, "id21"], [0, "id22"], [0, "id23"], [0, "id24"], [0, "id25"], [0, "id26"], [0, "id27"], [0, "id28"], [0, "id29"], [0, "id30"], [0, "id31"], [0, "id32"], [0, "id33"], [0, "id34"], [0, "id35"], [0, "id36"], [0, "id37"], [0, "id38"], [0, "id39"], [0, "id40"], [0, "id41"], [0, "id42"], [0, "id43"], [0, "id44"], [0, "id45"], [0, "id46"], [0, "id47"], [0, "id48"], [0, "id49"], [0, "id50"], [0, "id51"], [0, "id52"], [0, "id53"], [0, "id54"], [0, "id55"], [0, "id56"], [0, "id57"], [0, "id58"], [0, "id59"], [0, "id60"], [0, "id61"], [0, "id62"], [0, "id63"], [0, "id64"], [0, "id65"], [0, "id66"], [0, "id67"], [0, "id68"], [0, "id69"], [0, "id70"], [0, "id71"], [0, "id74"], [0, "id75"], [0, "id76"], [0, "id77"], [0, "id78"], [0, "id79"], [0, "id80"], [0, "id81"], [0, "id82"], [0, "id83"], [0, "id84"], [0, "id85"], [0, "id86"], [0, "id87"], [0, "id88"], [0, "id89"], [0, "id90"], [0, "id91"], [0, "id92"], [0, "id93"], [0, "id94"], [0, "id95"], [0, "id96"], [0, "id97"], [0, "id98"], [0, "id99"], [0, "id100"], [0, "id101"], [0, "id102"], [0, "id103"], [0, "id104"], [0, "id105"], [0, "id106"], [0, "id109"], [0, "id110"], [0, "id111"], [0, "id112"], [0, "id113"], [1170, "example"], [1170, "id2"], [1170, "id3"], [1170, "id4"], [1186, "example"]], "ancestors": [[0, "runoak-ancestors"]], "annotate": [[0, "runoak-annotate"]], "apply": [[0, "runoak-apply"]], "Warning:": [[0, "warning"]], "apply-obsolete": [[0, "runoak-apply-obsolete"]], "apply-taxon-constraints": [[0, "runoak-apply-taxon-constraints"]], "associations": [[0, "runoak-associations"]], "associations-counts": [[0, "runoak-associations-counts"]], "associations-matrix": [[0, "runoak-associations-matrix"]], "axioms": [[0, "runoak-axioms"]], "cache-clear": [[0, "runoak-cache-clear"]], "cache-ls": [[0, "runoak-cache-ls"]], "definitions": [[0, "runoak-definitions"]], "descendants": [[0, "runoak-descendants"]], "diff": [[0, "runoak-diff"]], "diff-associations": [[0, "runoak-diff-associations"]], "diff-terms": [[0, "runoak-diff-terms"]], "diff-via-mappings": [[0, "runoak-diff-via-mappings"]], "disjoints": [[0, "runoak-disjoints"]], "dump": [[0, "runoak-dump"]], "enrichment": [[0, "runoak-enrichment"]], "expand-subsets": [[0, "runoak-expand-subsets"]], "extract": [[0, "runoak-extract"]], "fill-table": [[0, "runoak-fill-table"]], "generate-definitions": [[0, "runoak-generate-definitions"]], "generate-disjoints": [[0, "runoak-generate-disjoints"]], "generate-lexical-replacements": [[0, "runoak-generate-lexical-replacements"]], "generate-logical-definitions": [[0, "runoak-generate-logical-definitions"]], "generate-synonyms": [[0, "runoak-generate-synonyms"]], "info": [[0, "runoak-info"]], "information-content": [[0, "runoak-information-content"]], "labels": [[0, "runoak-labels"]], "languages": [[0, "runoak-languages"]], "leafs": [[0, "runoak-leafs"]], "lexmatch": [[0, "runoak-lexmatch"]], "Examples": [[0, "examples"], [234, "examples"], [247, "examples"], [1162, "examples"], [1178, "examples"], [1186, "examples"]], "lint": [[0, "runoak-lint"]], "logical-definitions": [[0, "runoak-logical-definitions"]], "mappings": [[0, "runoak-mappings"]], "migrate-curies": [[0, "runoak-migrate-curies"]], "normalize": [[0, "runoak-normalize"]], "obsoletes": [[0, "runoak-obsoletes"]], "ontologies": [[0, "runoak-ontologies"]], "ontology-metadata": [[0, "runoak-ontology-metadata"]], "ontology-versions": [[0, "runoak-ontology-versions"]], "paths": [[0, "runoak-paths"]], "prefixes": [[0, "runoak-prefixes"]], "query": [[0, "runoak-query"]], "relationships": [[0, "runoak-relationships"]], "rollup": [[0, "runoak-rollup"]], "roots": [[0, "runoak-roots"]], "search": [[0, "runoak-search"]], "set-apikey": [[0, "runoak-set-apikey"]], "siblings": [[0, "runoak-siblings"]], "similarity": [[0, "runoak-similarity"]], "similarity-pair": [[0, "runoak-similarity-pair"]], "singletons": [[0, "runoak-singletons"]], "statistics": [[0, "runoak-statistics"]], "subsets": [[0, "runoak-subsets"]], "See Also:": [[0, "see-also"]], "synonymize": [[0, "runoak-synonymize"]], "taxon-constraints": [[0, "runoak-taxon-constraints"], [970, "taxon-constraints"]], "term-categories": [[0, "runoak-term-categories"]], "term-metadata": [[0, "runoak-term-metadata"]], "term-subsets": [[0, "runoak-term-subsets"]], "terms": [[0, "runoak-terms"]], "termset-similarity": [[0, "runoak-termset-similarity"]], "transform": [[0, "runoak-transform"]], "tree": [[0, "runoak-tree"]], "validate": [[0, "runoak-validate"]], "validate-definitions": [[0, "runoak-validate-definitions"]], "Notes:": [[0, "notes"]], "validate-mappings": [[0, "runoak-validate-mappings"]], "validate-multiple": [[0, "runoak-validate-multiple"]], "viz": [[0, "runoak-viz"]], "Ontology Concepts": [[1, "ontology-concepts"]], "Ontology": [[1, "ontology"]], "Ontology Element": [[1, "ontology-element"]], "Imports and Ontologies within Ontologies": [[1, "imports-and-ontologies-within-ontologies"]], "URIs and CURIEs and identifiers": [[1, "uris-and-curies-and-identifiers"]], "Prefix Maps": [[1, "prefix-maps"]], "Relationships / Edges": [[1, "relationships-edges"]], "Mappings": [[1, "mappings"], [3, "mappings"], [4, "mappings"], [17, "mappings"], [20, "mappings"], [21, "mappings"], [22, "mappings"], [23, "mappings"], [24, "mappings"], [94, "mappings"], [95, "mappings"], [96, "mappings"], [155, "mappings"], [159, "mappings"], [214, "mappings"], [215, "mappings"], [219, "mappings"], [225, "mappings"], [251, "mappings"], [252, "mappings"], [264, "mappings"], [265, "mappings"], [266, "mappings"], [267, "mappings"], [271, "mappings"], [296, "mappings"], [297, "mappings"], [309, "mappings"], [310, "mappings"], [311, "mappings"], [312, "mappings"], [313, "mappings"], [314, "mappings"], [318, "mappings"], [319, "mappings"], [321, "mappings"], [322, "mappings"], [325, "mappings"], [326, "mappings"], [375, "mappings"], [376, "mappings"], [383, "mappings"], [384, "mappings"], [385, "mappings"], [387, "mappings"], [388, "mappings"], [389, "mappings"], [391, "mappings"], [392, "mappings"], [396, "mappings"], [397, "mappings"], [399, "mappings"], [405, "mappings"], [406, "mappings"], [408, "mappings"], [413, "mappings"], [414, "mappings"], [415, "mappings"], [420, "mappings"], [479, "mappings"], [482, "mappings"], [483, "mappings"], [484, "mappings"], [485, "mappings"], [486, "mappings"], [487, "mappings"], [488, "mappings"], [491, "mappings"], [492, "mappings"], [500, "mappings"], [505, "mappings"], [506, "mappings"], [507, "mappings"], [508, "mappings"], [509, "mappings"], [510, "mappings"], [511, "mappings"], [512, "mappings"], [515, "mappings"], [524, "mappings"], [525, "mappings"], [529, "mappings"], [533, "mappings"], [535, "mappings"], [536, "mappings"], [538, "mappings"], [539, "mappings"], [540, "mappings"], [543, "mappings"], [544, "mappings"], [545, "mappings"], [548, "mappings"], [680, "mappings"], [695, "mappings"], [696, "mappings"], [698, "mappings"], [699, "mappings"], [746, "mappings"], [764, "mappings"], [767, "mappings"], [768, "mappings"], [769, "mappings"], [816, "mappings"], [818, "mappings"], [819, "mappings"], [820, "mappings"], [827, "mappings"], [828, "mappings"], [830, "mappings"], [831, "mappings"], [838, "mappings"], [841, "mappings"], [842, "mappings"], [843, "mappings"], [845, "mappings"], [939, "mappings"], [942, "mappings"], [943, "mappings"], [944, "mappings"], [945, "mappings"], [981, "mappings"], [991, "mappings"], [992, "mappings"], [993, "mappings"], [994, "mappings"], [1031, "mappings"], [1038, "mappings"], [1043, "mappings"], [1044, "mappings"], [1046, "mappings"], [1049, "mappings"], [1050, "mappings"], [1051, "mappings"], [1052, "mappings"], [1053, "mappings"], [1058, "mappings"], [1061, "mappings"], [1062, "mappings"], [1063, "mappings"], [1152, "mappings"]], "Ontology Format": [[1, "ontology-format"]], "Statements and Axioms": [[1, "statements-and-axioms"]], "Subsets": [[1, "subsets"], [46, "subsets"], [127, "subsets"], [165, "subsets"], [236, "subsets"], [281, "subsets"], [335, "subsets"], [440, "subsets"], [616, "subsets"], [720, "subsets"], [783, "subsets"], [885, "subsets"], [956, "subsets"], [1004, "subsets"], [1070, "subsets"]], "Labels/Names": [[1, "labels-names"]], "Contribution Guidelines": [[2, "contribution-guidelines"]], "Reporting issues and giving general feedback": [[2, "reporting-issues-and-giving-general-feedback"]], "Contributing documentation": [[2, "contributing-documentation"]], "Contributing code": [[2, "contributing-code"]], "Understand design patterns used": [[2, "understand-design-patterns-used"]], "Please make a Pull Request for all contributions.": [[2, "please-make-a-pull-request-for-all-contributions"]], "Always write tests": [[2, "always-write-tests"]], "How to contribute a plugin": [[2, "how-to-contribute-a-plugin"]], "How to contribute a new subcommand": [[2, "how-to-contribute-a-new-subcommand"]], "How to contribute to a notebook or add a new notebook": [[2, "how-to-contribute-to-a-notebook-or-add-a-new-notebook"]], "How to contribute a new adapter/implementation": [[2, "how-to-contribute-a-new-adapter-implementation"]], "How to contribute a new utility function": [[2, "how-to-contribute-a-new-utility-function"]], "How to contribute a datamodel": [[2, "how-to-contribute-a-datamodel"]], "Release to PyPI": [[2, "release-to-pypi"], [1129, "release-to-pypi"]], "Class: Association": [[3, "class-association"]], "Inheritance": [[3, "inheritance"], [17, "inheritance"], [22, "inheritance"], [39, "inheritance"], [40, "inheritance"], [47, "inheritance"], [48, "inheritance"], [49, "inheritance"], [50, "inheritance"], [51, "inheritance"], [52, "inheritance"], [54, "inheritance"], [55, "inheritance"], [56, "inheritance"], [61, "inheritance"], [62, "inheritance"], [64, "inheritance"], [68, "inheritance"], [69, "inheritance"], [70, "inheritance"], [71, "inheritance"], [72, "inheritance"], [76, "inheritance"], [77, "inheritance"], [82, "inheritance"], [83, "inheritance"], [89, "inheritance"], [168, "inheritance"], [169, "inheritance"], [170, "inheritance"], [172, "inheritance"], [173, "inheritance"], [175, "inheritance"], [177, "inheritance"], [178, "inheritance"], [179, "inheritance"], [183, "inheritance"], [187, "inheritance"], [188, "inheritance"], [190, "inheritance"], [191, "inheritance"], [193, "inheritance"], [195, "inheritance"], [196, "inheritance"], [198, "inheritance"], [201, "inheritance"], [251, "inheritance"], [266, "inheritance"], [267, "inheritance"], [296, "inheritance"], [311, "inheritance"], [312, "inheritance"], [375, "inheritance"], [376, "inheritance"], [383, "inheritance"], [384, "inheritance"], [385, "inheritance"], [388, "inheritance"], [396, "inheritance"], [406, "inheritance"], [408, "inheritance"], [414, "inheritance"], [420, "inheritance"], [479, "inheritance"], [483, "inheritance"], [484, "inheritance"], [485, "inheritance"], [486, "inheritance"], [491, "inheritance"], [492, "inheritance"], [500, "inheritance"], [505, "inheritance"], [506, "inheritance"], [507, "inheritance"], [508, "inheritance"], [509, "inheritance"], [510, "inheritance"], [511, "inheritance"], [512, "inheritance"], [513, "inheritance"], [514, "inheritance"], [515, "inheritance"], [524, "inheritance"], [525, "inheritance"], [530, "inheritance"], [533, "inheritance"], [536, "inheritance"], [538, "inheritance"], [539, "inheritance"], [540, "inheritance"], [543, "inheritance"], [544, "inheritance"], [545, "inheritance"], [548, "inheritance"], [552, "inheritance"], [553, "inheritance"], [554, "inheritance"], [555, "inheritance"], [556, "inheritance"], [558, "inheritance"], [559, "inheritance"], [560, "inheritance"], [561, "inheritance"], [562, "inheritance"], [563, "inheritance"], [564, "inheritance"], [565, "inheritance"], [566, "inheritance"], [567, "inheritance"], [568, "inheritance"], [569, "inheritance"], [570, "inheritance"], [571, "inheritance"], [572, "inheritance"], [573, "inheritance"], [574, "inheritance"], [575, "inheritance"], [576, "inheritance"], [577, "inheritance"], [578, "inheritance"], [579, "inheritance"], [580, "inheritance"], [581, "inheritance"], [582, "inheritance"], [583, "inheritance"], [584, "inheritance"], [585, "inheritance"], [586, "inheritance"], [587, "inheritance"], [588, "inheritance"], [589, "inheritance"], [591, "inheritance"], [592, "inheritance"], [593, "inheritance"], [594, "inheritance"], [595, "inheritance"], [596, "inheritance"], [598, "inheritance"], [599, "inheritance"], [600, "inheritance"], [601, "inheritance"], [602, "inheritance"], [603, "inheritance"], [604, "inheritance"], [606, "inheritance"], [607, "inheritance"], [611, "inheritance"], [612, "inheritance"], [613, "inheritance"], [617, "inheritance"], [618, "inheritance"], [619, "inheritance"], [628, "inheritance"], [629, "inheritance"], [630, "inheritance"], [631, "inheritance"], [632, "inheritance"], [634, "inheritance"], [635, "inheritance"], [636, "inheritance"], [637, "inheritance"], [638, "inheritance"], [644, "inheritance"], [646, "inheritance"], [647, "inheritance"], [648, "inheritance"], [649, "inheritance"], [650, "inheritance"], [652, "inheritance"], [653, "inheritance"], [654, "inheritance"], [655, "inheritance"], [656, "inheritance"], [657, "inheritance"], [659, "inheritance"], [661, "inheritance"], [662, "inheritance"], [663, "inheritance"], [664, "inheritance"], [665, "inheritance"], [667, "inheritance"], [668, "inheritance"], [669, "inheritance"], [671, "inheritance"], [673, "inheritance"], [675, "inheritance"], [676, "inheritance"], [677, "inheritance"], [764, "inheritance"], [768, "inheritance"], [769, "inheritance"], [775, "inheritance"], [780, "inheritance"], [781, "inheritance"], [784, "inheritance"], [785, "inheritance"], [786, "inheritance"], [797, "inheritance"], [801, "inheritance"], [802, "inheritance"], [803, "inheritance"], [807, "inheritance"], [811, "inheritance"], [812, "inheritance"], [814, "inheritance"], [827, "inheritance"], [830, "inheritance"], [831, "inheritance"], [841, "inheritance"], [843, "inheritance"], [845, "inheritance"], [850, "inheritance"], [851, "inheritance"], [852, "inheritance"], [858, "inheritance"], [861, "inheritance"], [862, "inheritance"], [863, "inheritance"], [864, "inheritance"], [870, "inheritance"], [871, "inheritance"], [872, "inheritance"], [873, "inheritance"], [876, "inheritance"], [880, "inheritance"], [881, "inheritance"], [886, "inheritance"], [889, "inheritance"], [893, "inheritance"], [895, "inheritance"], [896, "inheritance"], [897, "inheritance"], [899, "inheritance"], [901, "inheritance"], [902, "inheritance"], [906, "inheritance"], [908, "inheritance"], [911, "inheritance"], [912, "inheritance"], [914, "inheritance"], [918, "inheritance"], [919, "inheritance"], [939, "inheritance"], [942, "inheritance"], [943, "inheritance"], [945, "inheritance"], [991, "inheritance"], [1031, "inheritance"], [1038, "inheritance"], [1043, "inheritance"], [1044, "inheritance"], [1046, "inheritance"], [1050, "inheritance"], [1051, "inheritance"], [1052, "inheritance"], [1053, "inheritance"], [1062, "inheritance"], [1063, "inheritance"]], "Slots": [[3, "slots"], [4, "slots"], [17, "slots"], [20, "slots"], [21, "slots"], [22, "slots"], [23, "slots"], [24, "slots"], [46, "slots"], [94, "slots"], [95, "slots"], [96, "slots"], [127, "slots"], [142, "slots"], [150, "slots"], [155, "slots"], [159, "slots"], [165, "slots"], [214, "slots"], [215, "slots"], [216, "slots"], [219, "slots"], [225, "slots"], [236, "slots"], [251, "slots"], [252, "slots"], [264, "slots"], [265, "slots"], [266, "slots"], [267, "slots"], [271, "slots"], [275, "slots"], [281, "slots"], [296, "slots"], [297, "slots"], [309, "slots"], [310, "slots"], [311, "slots"], [312, "slots"], [313, "slots"], [314, "slots"], [318, "slots"], [319, "slots"], [321, "slots"], [322, "slots"], [325, "slots"], [326, "slots"], [328, "slots"], [335, "slots"], [375, "slots"], [376, "slots"], [383, "slots"], [384, "slots"], [385, "slots"], [387, "slots"], [388, "slots"], [389, "slots"], [391, "slots"], [392, "slots"], [396, "slots"], [397, "slots"], [399, "slots"], [405, "slots"], [406, "slots"], [407, "slots"], [408, "slots"], [409, "slots"], [413, "slots"], [414, "slots"], [415, "slots"], [420, "slots"], [440, "slots"], [479, "slots"], [482, "slots"], [483, "slots"], [484, "slots"], [485, "slots"], [486, "slots"], [487, "slots"], [488, "slots"], [491, "slots"], [492, "slots"], [500, "slots"], [505, "slots"], [506, "slots"], [507, "slots"], [508, "slots"], [509, "slots"], [510, "slots"], [511, "slots"], [512, "slots"], [515, "slots"], [524, "slots"], [525, "slots"], [529, "slots"], [533, "slots"], [535, "slots"], [536, "slots"], [538, "slots"], [539, "slots"], [540, "slots"], [543, "slots"], [544, "slots"], [545, "slots"], [548, "slots"], [616, "slots"], [680, "slots"], [688, "slots"], [695, "slots"], [696, "slots"], [697, "slots"], [698, "slots"], [699, "slots"], [701, "slots"], [720, "slots"], [746, "slots"], [764, "slots"], [767, "slots"], [768, "slots"], [769, "slots"], [783, "slots"], [816, "slots"], [818, "slots"], [819, "slots"], [820, "slots"], [827, "slots"], [828, "slots"], [830, "slots"], [831, "slots"], [838, "slots"], [841, "slots"], [842, "slots"], [843, "slots"], [845, "slots"], [885, "slots"], [939, "slots"], [942, "slots"], [943, "slots"], [944, "slots"], [945, "slots"], [956, "slots"], [981, "slots"], [991, "slots"], [992, "slots"], [993, "slots"], [994, "slots"], [1004, "slots"], [1031, "slots"], [1038, "slots"], [1043, "slots"], [1044, "slots"], [1046, "slots"], [1049, "slots"], [1050, "slots"], [1051, "slots"], [1052, "slots"], [1053, "slots"], [1054, "slots"], [1058, "slots"], [1061, "slots"], [1062, "slots"], [1063, "slots"], [1070, "slots"]], "Usages": [[3, "usages"], [23, "usages"], [24, "usages"], [95, "usages"], [155, "usages"], [214, "usages"], [219, "usages"], [225, "usages"], [252, "usages"], [264, "usages"], [266, "usages"], [267, "usages"], [271, "usages"], [297, "usages"], [309, "usages"], [311, "usages"], [312, "usages"], [313, "usages"], [318, "usages"], [319, "usages"], [321, "usages"], [325, "usages"], [326, "usages"], [376, "usages"], [383, "usages"], [385, "usages"], [387, "usages"], [388, "usages"], [389, "usages"], [391, "usages"], [396, "usages"], [397, "usages"], [399, "usages"], [405, "usages"], [406, "usages"], [413, "usages"], [414, "usages"], [415, "usages"], [420, "usages"], [479, "usages"], [482, "usages"], [483, "usages"], [487, "usages"], [491, "usages"], [492, "usages"], [515, "usages"], [524, "usages"], [525, "usages"], [529, "usages"], [535, "usages"], [536, "usages"], [538, "usages"], [539, "usages"], [543, "usages"], [545, "usages"], [680, "usages"], [696, "usages"], [698, "usages"], [746, "usages"], [767, "usages"], [768, "usages"], [816, "usages"], [818, "usages"], [820, "usages"], [827, "usages"], [828, "usages"], [830, "usages"], [838, "usages"], [841, "usages"], [842, "usages"], [845, "usages"], [939, "usages"], [942, "usages"], [943, "usages"], [944, "usages"], [991, "usages"], [994, "usages"], [1031, "usages"], [1046, "usages"], [1050, "usages"], [1053, "usages"], [1058, "usages"], [1061, "usages"], [1063, "usages"]], "Identifier and Mapping Information": [[3, "identifier-and-mapping-information"], [4, "identifier-and-mapping-information"], [5, "identifier-and-mapping-information"], [6, "identifier-and-mapping-information"], [7, "identifier-and-mapping-information"], [8, "identifier-and-mapping-information"], [9, "identifier-and-mapping-information"], [10, "identifier-and-mapping-information"], [11, "identifier-and-mapping-information"], [12, "identifier-and-mapping-information"], [13, "identifier-and-mapping-information"], [14, "identifier-and-mapping-information"], [15, "identifier-and-mapping-information"], [16, "identifier-and-mapping-information"], [17, "identifier-and-mapping-information"], [18, "identifier-and-mapping-information"], [19, "identifier-and-mapping-information"], [20, "identifier-and-mapping-information"], [21, "identifier-and-mapping-information"], [22, "identifier-and-mapping-information"], [23, "identifier-and-mapping-information"], [24, "identifier-and-mapping-information"], [25, "identifier-and-mapping-information"], [26, "identifier-and-mapping-information"], [27, "identifier-and-mapping-information"], [28, "identifier-and-mapping-information"], [29, "identifier-and-mapping-information"], [30, "identifier-and-mapping-information"], [32, "identifier-and-mapping-information"], [33, "identifier-and-mapping-information"], [34, "identifier-and-mapping-information"], [35, "identifier-and-mapping-information"], [36, "identifier-and-mapping-information"], [37, "identifier-and-mapping-information"], [38, "identifier-and-mapping-information"], [39, "identifier-and-mapping-information"], [40, "identifier-and-mapping-information"], [41, "identifier-and-mapping-information"], [42, "identifier-and-mapping-information"], [43, "identifier-and-mapping-information"], [44, "identifier-and-mapping-information"], [45, "identifier-and-mapping-information"], [47, "identifier-and-mapping-information"], [48, "identifier-and-mapping-information"], [49, "identifier-and-mapping-information"], [50, "identifier-and-mapping-information"], [51, "identifier-and-mapping-information"], [52, "identifier-and-mapping-information"], [53, "identifier-and-mapping-information"], [54, "identifier-and-mapping-information"], [55, "identifier-and-mapping-information"], [56, "identifier-and-mapping-information"], [57, "identifier-and-mapping-information"], [58, "identifier-and-mapping-information"], [59, "identifier-and-mapping-information"], [60, "identifier-and-mapping-information"], [61, "identifier-and-mapping-information"], [62, "identifier-and-mapping-information"], [63, "identifier-and-mapping-information"], [64, "identifier-and-mapping-information"], [65, "identifier-and-mapping-information"], [66, "identifier-and-mapping-information"], [67, "identifier-and-mapping-information"], [68, "identifier-and-mapping-information"], [69, "identifier-and-mapping-information"], [70, "identifier-and-mapping-information"], [71, "identifier-and-mapping-information"], [72, "identifier-and-mapping-information"], [73, "identifier-and-mapping-information"], [74, "identifier-and-mapping-information"], [75, "identifier-and-mapping-information"], [76, "identifier-and-mapping-information"], [77, "identifier-and-mapping-information"], [78, "identifier-and-mapping-information"], [79, "identifier-and-mapping-information"], [80, "identifier-and-mapping-information"], [81, "identifier-and-mapping-information"], [82, "identifier-and-mapping-information"], [83, "identifier-and-mapping-information"], [84, "identifier-and-mapping-information"], [85, "identifier-and-mapping-information"], [86, "identifier-and-mapping-information"], [87, "identifier-and-mapping-information"], [88, "identifier-and-mapping-information"], [89, "identifier-and-mapping-information"], [90, "identifier-and-mapping-information"], [91, "identifier-and-mapping-information"], [92, "identifier-and-mapping-information"], [93, "identifier-and-mapping-information"], [94, "identifier-and-mapping-information"], [95, "identifier-and-mapping-information"], [96, "identifier-and-mapping-information"], [97, "identifier-and-mapping-information"], [98, "identifier-and-mapping-information"], [99, "identifier-and-mapping-information"], [100, "identifier-and-mapping-information"], [101, "identifier-and-mapping-information"], [102, "identifier-and-mapping-information"], [103, "identifier-and-mapping-information"], [104, "identifier-and-mapping-information"], [105, "identifier-and-mapping-information"], [106, "identifier-and-mapping-information"], [107, "identifier-and-mapping-information"], [108, "identifier-and-mapping-information"], [109, "identifier-and-mapping-information"], [110, "identifier-and-mapping-information"], [111, "identifier-and-mapping-information"], [112, "identifier-and-mapping-information"], [113, "identifier-and-mapping-information"], [114, "identifier-and-mapping-information"], [115, "identifier-and-mapping-information"], [116, "identifier-and-mapping-information"], [117, "identifier-and-mapping-information"], [118, "identifier-and-mapping-information"], [119, "identifier-and-mapping-information"], [121, "identifier-and-mapping-information"], [122, "identifier-and-mapping-information"], [123, "identifier-and-mapping-information"], [124, "identifier-and-mapping-information"], [125, "identifier-and-mapping-information"], [126, "identifier-and-mapping-information"], [128, "identifier-and-mapping-information"], [129, "identifier-and-mapping-information"], [130, "identifier-and-mapping-information"], [131, "identifier-and-mapping-information"], [132, "identifier-and-mapping-information"], [133, "identifier-and-mapping-information"], [134, "identifier-and-mapping-information"], [135, "identifier-and-mapping-information"], [136, "identifier-and-mapping-information"], [137, "identifier-and-mapping-information"], [138, "identifier-and-mapping-information"], [139, "identifier-and-mapping-information"], [140, "identifier-and-mapping-information"], [141, "identifier-and-mapping-information"], [142, "identifier-and-mapping-information"], [143, "identifier-and-mapping-information"], [144, "identifier-and-mapping-information"], [145, "identifier-and-mapping-information"], [146, "identifier-and-mapping-information"], [147, "identifier-and-mapping-information"], [148, "identifier-and-mapping-information"], [149, "identifier-and-mapping-information"], [150, "identifier-and-mapping-information"], [151, "identifier-and-mapping-information"], [152, "identifier-and-mapping-information"], [153, "identifier-and-mapping-information"], [154, "identifier-and-mapping-information"], [155, "identifier-and-mapping-information"], [156, "identifier-and-mapping-information"], [157, "identifier-and-mapping-information"], [158, "identifier-and-mapping-information"], [159, "identifier-and-mapping-information"], [160, "identifier-and-mapping-information"], [161, "identifier-and-mapping-information"], [162, "identifier-and-mapping-information"], [163, "identifier-and-mapping-information"], [166, "identifier-and-mapping-information"], [167, "identifier-and-mapping-information"], [168, "identifier-and-mapping-information"], [169, "identifier-and-mapping-information"], [170, "identifier-and-mapping-information"], [171, "identifier-and-mapping-information"], [172, "identifier-and-mapping-information"], [173, "identifier-and-mapping-information"], [174, "identifier-and-mapping-information"], [175, "identifier-and-mapping-information"], [176, "identifier-and-mapping-information"], [177, "identifier-and-mapping-information"], [178, "identifier-and-mapping-information"], [179, "identifier-and-mapping-information"], [180, "identifier-and-mapping-information"], [181, "identifier-and-mapping-information"], [182, "identifier-and-mapping-information"], [183, "identifier-and-mapping-information"], [184, "identifier-and-mapping-information"], [185, "identifier-and-mapping-information"], [186, "identifier-and-mapping-information"], [187, "identifier-and-mapping-information"], [188, "identifier-and-mapping-information"], [189, "identifier-and-mapping-information"], [190, "identifier-and-mapping-information"], [191, "identifier-and-mapping-information"], [192, "identifier-and-mapping-information"], [193, "identifier-and-mapping-information"], [194, "identifier-and-mapping-information"], [195, "identifier-and-mapping-information"], [196, "identifier-and-mapping-information"], [197, "identifier-and-mapping-information"], [198, "identifier-and-mapping-information"], [199, "identifier-and-mapping-information"], [200, "identifier-and-mapping-information"], [201, "identifier-and-mapping-information"], [205, "identifier-and-mapping-information"], [206, "identifier-and-mapping-information"], [207, "identifier-and-mapping-information"], [208, "identifier-and-mapping-information"], [209, "identifier-and-mapping-information"], [210, "identifier-and-mapping-information"], [211, "identifier-and-mapping-information"], [212, "identifier-and-mapping-information"], [213, "identifier-and-mapping-information"], [214, "identifier-and-mapping-information"], [215, "identifier-and-mapping-information"], [216, "identifier-and-mapping-information"], [217, "identifier-and-mapping-information"], [218, "identifier-and-mapping-information"], [219, "identifier-and-mapping-information"], [220, "identifier-and-mapping-information"], [221, "identifier-and-mapping-information"], [222, "identifier-and-mapping-information"], [223, "identifier-and-mapping-information"], [224, "identifier-and-mapping-information"], [225, "identifier-and-mapping-information"], [226, "identifier-and-mapping-information"], [227, "identifier-and-mapping-information"], [228, "identifier-and-mapping-information"], [229, "identifier-and-mapping-information"], [230, "identifier-and-mapping-information"], [231, "identifier-and-mapping-information"], [232, "identifier-and-mapping-information"], [233, "identifier-and-mapping-information"], [234, "identifier-and-mapping-information"], [235, "identifier-and-mapping-information"], [237, "identifier-and-mapping-information"], [239, "identifier-and-mapping-information"], [240, "identifier-and-mapping-information"], [241, "identifier-and-mapping-information"], [242, "identifier-and-mapping-information"], [243, "identifier-and-mapping-information"], [244, "identifier-and-mapping-information"], [245, "identifier-and-mapping-information"], [246, "identifier-and-mapping-information"], [247, "identifier-and-mapping-information"], [248, "identifier-and-mapping-information"], [249, "identifier-and-mapping-information"], [251, "identifier-and-mapping-information"], [252, "identifier-and-mapping-information"], [253, "identifier-and-mapping-information"], [254, "identifier-and-mapping-information"], [255, "identifier-and-mapping-information"], [256, "identifier-and-mapping-information"], [257, "identifier-and-mapping-information"], [258, "identifier-and-mapping-information"], [259, "identifier-and-mapping-information"], [260, "identifier-and-mapping-information"], [261, "identifier-and-mapping-information"], [262, "identifier-and-mapping-information"], [263, "identifier-and-mapping-information"], [264, "identifier-and-mapping-information"], [265, "identifier-and-mapping-information"], [266, "identifier-and-mapping-information"], [267, "identifier-and-mapping-information"], [268, "identifier-and-mapping-information"], [269, "identifier-and-mapping-information"], [270, "identifier-and-mapping-information"], [271, "identifier-and-mapping-information"], [272, "identifier-and-mapping-information"], [273, "identifier-and-mapping-information"], [274, "identifier-and-mapping-information"], [275, "identifier-and-mapping-information"], [276, "identifier-and-mapping-information"], [277, "identifier-and-mapping-information"], [278, "identifier-and-mapping-information"], [279, "identifier-and-mapping-information"], [280, "identifier-and-mapping-information"], [284, "identifier-and-mapping-information"], [285, "identifier-and-mapping-information"], [286, "identifier-and-mapping-information"], [287, "identifier-and-mapping-information"], [288, "identifier-and-mapping-information"], [289, "identifier-and-mapping-information"], [290, "identifier-and-mapping-information"], [291, "identifier-and-mapping-information"], [292, "identifier-and-mapping-information"], [293, "identifier-and-mapping-information"], [294, "identifier-and-mapping-information"], [296, "identifier-and-mapping-information"], [297, "identifier-and-mapping-information"], [298, "identifier-and-mapping-information"], [299, "identifier-and-mapping-information"], [300, "identifier-and-mapping-information"], [301, "identifier-and-mapping-information"], [302, "identifier-and-mapping-information"], [303, "identifier-and-mapping-information"], [304, "identifier-and-mapping-information"], [305, "identifier-and-mapping-information"], [306, "identifier-and-mapping-information"], [307, "identifier-and-mapping-information"], [308, "identifier-and-mapping-information"], [309, "identifier-and-mapping-information"], [310, "identifier-and-mapping-information"], [311, "identifier-and-mapping-information"], [312, "identifier-and-mapping-information"], [313, "identifier-and-mapping-information"], [314, "identifier-and-mapping-information"], [315, "identifier-and-mapping-information"], [316, "identifier-and-mapping-information"], [317, "identifier-and-mapping-information"], [318, "identifier-and-mapping-information"], [319, "identifier-and-mapping-information"], [320, "identifier-and-mapping-information"], [321, "identifier-and-mapping-information"], [322, "identifier-and-mapping-information"], [323, "identifier-and-mapping-information"], [324, "identifier-and-mapping-information"], [325, "identifier-and-mapping-information"], [326, "identifier-and-mapping-information"], [327, "identifier-and-mapping-information"], [328, "identifier-and-mapping-information"], [329, "identifier-and-mapping-information"], [330, "identifier-and-mapping-information"], [331, "identifier-and-mapping-information"], [332, "identifier-and-mapping-information"], [333, "identifier-and-mapping-information"], [334, "identifier-and-mapping-information"], [336, "identifier-and-mapping-information"], [341, "identifier-and-mapping-information"], [342, "identifier-and-mapping-information"], [343, "identifier-and-mapping-information"], [344, "identifier-and-mapping-information"], [345, "identifier-and-mapping-information"], [346, "identifier-and-mapping-information"], [347, "identifier-and-mapping-information"], [348, "identifier-and-mapping-information"], [349, "identifier-and-mapping-information"], [350, "identifier-and-mapping-information"], [351, "identifier-and-mapping-information"], [352, "identifier-and-mapping-information"], [353, "identifier-and-mapping-information"], [354, "identifier-and-mapping-information"], [355, "identifier-and-mapping-information"], [356, "identifier-and-mapping-information"], [357, "identifier-and-mapping-information"], [358, "identifier-and-mapping-information"], [359, "identifier-and-mapping-information"], [360, "identifier-and-mapping-information"], [361, "identifier-and-mapping-information"], [362, "identifier-and-mapping-information"], [363, "identifier-and-mapping-information"], [364, "identifier-and-mapping-information"], [365, "identifier-and-mapping-information"], [366, "identifier-and-mapping-information"], [367, "identifier-and-mapping-information"], [368, "identifier-and-mapping-information"], [369, "identifier-and-mapping-information"], [370, "identifier-and-mapping-information"], [371, "identifier-and-mapping-information"], [372, "identifier-and-mapping-information"], [374, "identifier-and-mapping-information"], [375, "identifier-and-mapping-information"], [376, "identifier-and-mapping-information"], [377, "identifier-and-mapping-information"], [378, "identifier-and-mapping-information"], [379, "identifier-and-mapping-information"], [380, "identifier-and-mapping-information"], [381, "identifier-and-mapping-information"], [382, "identifier-and-mapping-information"], [383, "identifier-and-mapping-information"], [384, "identifier-and-mapping-information"], [385, "identifier-and-mapping-information"], [386, "identifier-and-mapping-information"], [387, "identifier-and-mapping-information"], [388, "identifier-and-mapping-information"], [389, "identifier-and-mapping-information"], [390, "identifier-and-mapping-information"], [391, "identifier-and-mapping-information"], [392, "identifier-and-mapping-information"], [393, "identifier-and-mapping-information"], [394, "identifier-and-mapping-information"], [395, "identifier-and-mapping-information"], [396, "identifier-and-mapping-information"], [397, "identifier-and-mapping-information"], [398, "identifier-and-mapping-information"], [399, "identifier-and-mapping-information"], [400, "identifier-and-mapping-information"], [401, "identifier-and-mapping-information"], [402, "identifier-and-mapping-information"], [403, "identifier-and-mapping-information"], [404, "identifier-and-mapping-information"], [405, "identifier-and-mapping-information"], [406, "identifier-and-mapping-information"], [407, "identifier-and-mapping-information"], [408, "identifier-and-mapping-information"], [409, "identifier-and-mapping-information"], [410, "identifier-and-mapping-information"], [411, "identifier-and-mapping-information"], [412, "identifier-and-mapping-information"], [413, "identifier-and-mapping-information"], [414, "identifier-and-mapping-information"], [415, "identifier-and-mapping-information"], [416, "identifier-and-mapping-information"], [417, "identifier-and-mapping-information"], [418, "identifier-and-mapping-information"], [419, "identifier-and-mapping-information"], [420, "identifier-and-mapping-information"], [421, "identifier-and-mapping-information"], [422, "identifier-and-mapping-information"], [423, "identifier-and-mapping-information"], [424, "identifier-and-mapping-information"], [425, "identifier-and-mapping-information"], [426, "identifier-and-mapping-information"], [427, "identifier-and-mapping-information"], [428, "identifier-and-mapping-information"], [429, "identifier-and-mapping-information"], [430, "identifier-and-mapping-information"], [431, "identifier-and-mapping-information"], [432, "identifier-and-mapping-information"], [433, "identifier-and-mapping-information"], [434, "identifier-and-mapping-information"], [435, "identifier-and-mapping-information"], [436, "identifier-and-mapping-information"], [437, "identifier-and-mapping-information"], [438, "identifier-and-mapping-information"], [439, "identifier-and-mapping-information"], [441, "identifier-and-mapping-information"], [442, "identifier-and-mapping-information"], [443, "identifier-and-mapping-information"], [444, "identifier-and-mapping-information"], [445, "identifier-and-mapping-information"], [446, "identifier-and-mapping-information"], [447, "identifier-and-mapping-information"], [448, "identifier-and-mapping-information"], [449, "identifier-and-mapping-information"], [450, "identifier-and-mapping-information"], [453, "identifier-and-mapping-information"], [454, "identifier-and-mapping-information"], [455, "identifier-and-mapping-information"], [456, "identifier-and-mapping-information"], [457, "identifier-and-mapping-information"], [458, "identifier-and-mapping-information"], [459, "identifier-and-mapping-information"], [460, "identifier-and-mapping-information"], [461, "identifier-and-mapping-information"], [462, "identifier-and-mapping-information"], [463, "identifier-and-mapping-information"], [464, "identifier-and-mapping-information"], [465, "identifier-and-mapping-information"], [466, "identifier-and-mapping-information"], [467, "identifier-and-mapping-information"], [468, "identifier-and-mapping-information"], [469, "identifier-and-mapping-information"], [470, "identifier-and-mapping-information"], [471, "identifier-and-mapping-information"], [473, "identifier-and-mapping-information"], [474, "identifier-and-mapping-information"], [475, "identifier-and-mapping-information"], [476, "identifier-and-mapping-information"], [477, "identifier-and-mapping-information"], [478, "identifier-and-mapping-information"], [479, "identifier-and-mapping-information"], [480, "identifier-and-mapping-information"], [481, "identifier-and-mapping-information"], [482, "identifier-and-mapping-information"], [483, "identifier-and-mapping-information"], [484, "identifier-and-mapping-information"], [485, "identifier-and-mapping-information"], [486, "identifier-and-mapping-information"], [487, "identifier-and-mapping-information"], [488, "identifier-and-mapping-information"], [489, "identifier-and-mapping-information"], [490, "identifier-and-mapping-information"], [491, "identifier-and-mapping-information"], [492, "identifier-and-mapping-information"], [493, "identifier-and-mapping-information"], [494, "identifier-and-mapping-information"], [495, "identifier-and-mapping-information"], [496, "identifier-and-mapping-information"], [497, "identifier-and-mapping-information"], [498, "identifier-and-mapping-information"], [499, "identifier-and-mapping-information"], [500, "identifier-and-mapping-information"], [501, "identifier-and-mapping-information"], [502, "identifier-and-mapping-information"], [503, "identifier-and-mapping-information"], [504, "identifier-and-mapping-information"], [505, "identifier-and-mapping-information"], [506, "identifier-and-mapping-information"], [507, "identifier-and-mapping-information"], [508, "identifier-and-mapping-information"], [509, "identifier-and-mapping-information"], [510, "identifier-and-mapping-information"], [511, "identifier-and-mapping-information"], [512, "identifier-and-mapping-information"], [513, "identifier-and-mapping-information"], [514, "identifier-and-mapping-information"], [515, "identifier-and-mapping-information"], [516, "identifier-and-mapping-information"], [517, "identifier-and-mapping-information"], [518, "identifier-and-mapping-information"], [519, "identifier-and-mapping-information"], [520, "identifier-and-mapping-information"], [521, "identifier-and-mapping-information"], [522, "identifier-and-mapping-information"], [523, "identifier-and-mapping-information"], [524, "identifier-and-mapping-information"], [525, "identifier-and-mapping-information"], [526, "identifier-and-mapping-information"], [527, "identifier-and-mapping-information"], [528, "identifier-and-mapping-information"], [529, "identifier-and-mapping-information"], [530, "identifier-and-mapping-information"], [531, "identifier-and-mapping-information"], [532, "identifier-and-mapping-information"], [533, "identifier-and-mapping-information"], [534, "identifier-and-mapping-information"], [535, "identifier-and-mapping-information"], [536, "identifier-and-mapping-information"], [538, "identifier-and-mapping-information"], [539, "identifier-and-mapping-information"], [540, "identifier-and-mapping-information"], [541, "identifier-and-mapping-information"], [542, "identifier-and-mapping-information"], [543, "identifier-and-mapping-information"], [544, "identifier-and-mapping-information"], [545, "identifier-and-mapping-information"], [546, "identifier-and-mapping-information"], [547, "identifier-and-mapping-information"], [548, "identifier-and-mapping-information"], [549, "identifier-and-mapping-information"], [550, "identifier-and-mapping-information"], [551, "identifier-and-mapping-information"], [552, "identifier-and-mapping-information"], [553, "identifier-and-mapping-information"], [554, "identifier-and-mapping-information"], [555, "identifier-and-mapping-information"], [556, "identifier-and-mapping-information"], [557, "identifier-and-mapping-information"], [558, "identifier-and-mapping-information"], [559, "identifier-and-mapping-information"], [560, "identifier-and-mapping-information"], [561, "identifier-and-mapping-information"], [562, "identifier-and-mapping-information"], [563, "identifier-and-mapping-information"], [564, "identifier-and-mapping-information"], [565, "identifier-and-mapping-information"], [566, "identifier-and-mapping-information"], [567, "identifier-and-mapping-information"], [568, "identifier-and-mapping-information"], [569, "identifier-and-mapping-information"], [570, "identifier-and-mapping-information"], [571, "identifier-and-mapping-information"], [572, "identifier-and-mapping-information"], [573, "identifier-and-mapping-information"], [574, "identifier-and-mapping-information"], [575, "identifier-and-mapping-information"], [576, "identifier-and-mapping-information"], [577, "identifier-and-mapping-information"], [578, "identifier-and-mapping-information"], [579, "identifier-and-mapping-information"], [580, "identifier-and-mapping-information"], [581, "identifier-and-mapping-information"], [582, "identifier-and-mapping-information"], [583, "identifier-and-mapping-information"], [584, "identifier-and-mapping-information"], [585, "identifier-and-mapping-information"], [586, "identifier-and-mapping-information"], [587, "identifier-and-mapping-information"], [588, "identifier-and-mapping-information"], [589, "identifier-and-mapping-information"], [590, "identifier-and-mapping-information"], [591, "identifier-and-mapping-information"], [592, "identifier-and-mapping-information"], [593, "identifier-and-mapping-information"], [594, "identifier-and-mapping-information"], [595, "identifier-and-mapping-information"], [596, "identifier-and-mapping-information"], [597, "identifier-and-mapping-information"], [598, "identifier-and-mapping-information"], [599, "identifier-and-mapping-information"], [600, "identifier-and-mapping-information"], [601, "identifier-and-mapping-information"], [602, "identifier-and-mapping-information"], [603, "identifier-and-mapping-information"], [604, "identifier-and-mapping-information"], [605, "identifier-and-mapping-information"], [606, "identifier-and-mapping-information"], [607, "identifier-and-mapping-information"], [608, "identifier-and-mapping-information"], [609, "identifier-and-mapping-information"], [610, "identifier-and-mapping-information"], [611, "identifier-and-mapping-information"], [612, "identifier-and-mapping-information"], [613, "identifier-and-mapping-information"], [614, "identifier-and-mapping-information"], [615, "identifier-and-mapping-information"], [617, "identifier-and-mapping-information"], [618, "identifier-and-mapping-information"], [619, "identifier-and-mapping-information"], [620, "identifier-and-mapping-information"], [621, "identifier-and-mapping-information"], [622, "identifier-and-mapping-information"], [623, "identifier-and-mapping-information"], [624, "identifier-and-mapping-information"], [625, "identifier-and-mapping-information"], [626, "identifier-and-mapping-information"], [627, "identifier-and-mapping-information"], [628, "identifier-and-mapping-information"], [629, "identifier-and-mapping-information"], [630, "identifier-and-mapping-information"], [631, "identifier-and-mapping-information"], [632, "identifier-and-mapping-information"], [633, "identifier-and-mapping-information"], [634, "identifier-and-mapping-information"], [635, "identifier-and-mapping-information"], [636, "identifier-and-mapping-information"], [637, "identifier-and-mapping-information"], [638, "identifier-and-mapping-information"], [639, "identifier-and-mapping-information"], [640, "identifier-and-mapping-information"], [641, "identifier-and-mapping-information"], [642, "identifier-and-mapping-information"], [643, "identifier-and-mapping-information"], [644, "identifier-and-mapping-information"], [646, "identifier-and-mapping-information"], [647, "identifier-and-mapping-information"], [648, "identifier-and-mapping-information"], [649, "identifier-and-mapping-information"], [650, "identifier-and-mapping-information"], [651, "identifier-and-mapping-information"], [652, "identifier-and-mapping-information"], [653, "identifier-and-mapping-information"], [654, "identifier-and-mapping-information"], [655, "identifier-and-mapping-information"], [656, "identifier-and-mapping-information"], [657, "identifier-and-mapping-information"], [658, "identifier-and-mapping-information"], [659, "identifier-and-mapping-information"], [660, "identifier-and-mapping-information"], [661, "identifier-and-mapping-information"], [662, "identifier-and-mapping-information"], [663, "identifier-and-mapping-information"], [664, "identifier-and-mapping-information"], [665, "identifier-and-mapping-information"], [666, "identifier-and-mapping-information"], [667, "identifier-and-mapping-information"], [668, "identifier-and-mapping-information"], [669, "identifier-and-mapping-information"], [670, "identifier-and-mapping-information"], [671, "identifier-and-mapping-information"], [673, "identifier-and-mapping-information"], [674, "identifier-and-mapping-information"], [675, "identifier-and-mapping-information"], [676, "identifier-and-mapping-information"], [677, "identifier-and-mapping-information"], [678, "identifier-and-mapping-information"], [679, "identifier-and-mapping-information"], [680, "identifier-and-mapping-information"], [681, "identifier-and-mapping-information"], [682, "identifier-and-mapping-information"], [683, "identifier-and-mapping-information"], [684, "identifier-and-mapping-information"], [685, "identifier-and-mapping-information"], [686, "identifier-and-mapping-information"], [687, "identifier-and-mapping-information"], [688, "identifier-and-mapping-information"], [689, "identifier-and-mapping-information"], [690, "identifier-and-mapping-information"], [691, "identifier-and-mapping-information"], [692, "identifier-and-mapping-information"], [693, "identifier-and-mapping-information"], [694, "identifier-and-mapping-information"], [695, "identifier-and-mapping-information"], [696, "identifier-and-mapping-information"], [697, "identifier-and-mapping-information"], [698, "identifier-and-mapping-information"], [699, "identifier-and-mapping-information"], [700, "identifier-and-mapping-information"], [701, "identifier-and-mapping-information"], [702, "identifier-and-mapping-information"], [703, "identifier-and-mapping-information"], [704, "identifier-and-mapping-information"], [705, "identifier-and-mapping-information"], [706, "identifier-and-mapping-information"], [707, "identifier-and-mapping-information"], [708, "identifier-and-mapping-information"], [709, "identifier-and-mapping-information"], [710, "identifier-and-mapping-information"], [711, "identifier-and-mapping-information"], [712, "identifier-and-mapping-information"], [713, "identifier-and-mapping-information"], [714, "identifier-and-mapping-information"], [715, "identifier-and-mapping-information"], [716, "identifier-and-mapping-information"], [717, "identifier-and-mapping-information"], [718, "identifier-and-mapping-information"], [719, "identifier-and-mapping-information"], [721, "identifier-and-mapping-information"], [722, "identifier-and-mapping-information"], [723, "identifier-and-mapping-information"], [724, "identifier-and-mapping-information"], [725, "identifier-and-mapping-information"], [726, "identifier-and-mapping-information"], [727, "identifier-and-mapping-information"], [728, "identifier-and-mapping-information"], [729, "identifier-and-mapping-information"], [730, "identifier-and-mapping-information"], [731, "identifier-and-mapping-information"], [732, "identifier-and-mapping-information"], [733, "identifier-and-mapping-information"], [734, "identifier-and-mapping-information"], [735, "identifier-and-mapping-information"], [736, "identifier-and-mapping-information"], [737, "identifier-and-mapping-information"], [739, "identifier-and-mapping-information"], [740, "identifier-and-mapping-information"], [741, "identifier-and-mapping-information"], [742, "identifier-and-mapping-information"], [743, "identifier-and-mapping-information"], [746, "identifier-and-mapping-information"], [747, "identifier-and-mapping-information"], [748, "identifier-and-mapping-information"], [749, "identifier-and-mapping-information"], [750, "identifier-and-mapping-information"], [751, "identifier-and-mapping-information"], [752, "identifier-and-mapping-information"], [753, "identifier-and-mapping-information"], [754, "identifier-and-mapping-information"], [755, "identifier-and-mapping-information"], [756, "identifier-and-mapping-information"], [757, "identifier-and-mapping-information"], [758, "identifier-and-mapping-information"], [759, "identifier-and-mapping-information"], [760, "identifier-and-mapping-information"], [761, "identifier-and-mapping-information"], [762, "identifier-and-mapping-information"], [763, "identifier-and-mapping-information"], [764, "identifier-and-mapping-information"], [765, "identifier-and-mapping-information"], [766, "identifier-and-mapping-information"], [767, "identifier-and-mapping-information"], [768, "identifier-and-mapping-information"], [769, "identifier-and-mapping-information"], [770, "identifier-and-mapping-information"], [771, "identifier-and-mapping-information"], [772, "identifier-and-mapping-information"], [773, "identifier-and-mapping-information"], [774, "identifier-and-mapping-information"], [775, "identifier-and-mapping-information"], [776, "identifier-and-mapping-information"], [777, "identifier-and-mapping-information"], [778, "identifier-and-mapping-information"], [779, "identifier-and-mapping-information"], [780, "identifier-and-mapping-information"], [781, "identifier-and-mapping-information"], [782, "identifier-and-mapping-information"], [784, "identifier-and-mapping-information"], [785, "identifier-and-mapping-information"], [786, "identifier-and-mapping-information"], [787, "identifier-and-mapping-information"], [788, "identifier-and-mapping-information"], [789, "identifier-and-mapping-information"], [790, "identifier-and-mapping-information"], [791, "identifier-and-mapping-information"], [792, "identifier-and-mapping-information"], [793, "identifier-and-mapping-information"], [794, "identifier-and-mapping-information"], [795, "identifier-and-mapping-information"], [796, "identifier-and-mapping-information"], [797, "identifier-and-mapping-information"], [798, "identifier-and-mapping-information"], [799, "identifier-and-mapping-information"], [800, "identifier-and-mapping-information"], [801, "identifier-and-mapping-information"], [802, "identifier-and-mapping-information"], [803, "identifier-and-mapping-information"], [804, "identifier-and-mapping-information"], [805, "identifier-and-mapping-information"], [806, "identifier-and-mapping-information"], [807, "identifier-and-mapping-information"], [808, "identifier-and-mapping-information"], [809, "identifier-and-mapping-information"], [810, "identifier-and-mapping-information"], [811, "identifier-and-mapping-information"], [812, "identifier-and-mapping-information"], [814, "identifier-and-mapping-information"], [816, "identifier-and-mapping-information"], [817, "identifier-and-mapping-information"], [818, "identifier-and-mapping-information"], [819, "identifier-and-mapping-information"], [820, "identifier-and-mapping-information"], [821, "identifier-and-mapping-information"], [822, "identifier-and-mapping-information"], [823, "identifier-and-mapping-information"], [824, "identifier-and-mapping-information"], [825, "identifier-and-mapping-information"], [826, "identifier-and-mapping-information"], [827, "identifier-and-mapping-information"], [828, "identifier-and-mapping-information"], [829, "identifier-and-mapping-information"], [830, "identifier-and-mapping-information"], [831, "identifier-and-mapping-information"], [832, "identifier-and-mapping-information"], [833, "identifier-and-mapping-information"], [834, "identifier-and-mapping-information"], [835, "identifier-and-mapping-information"], [836, "identifier-and-mapping-information"], [837, "identifier-and-mapping-information"], [838, "identifier-and-mapping-information"], [839, "identifier-and-mapping-information"], [840, "identifier-and-mapping-information"], [841, "identifier-and-mapping-information"], [842, "identifier-and-mapping-information"], [843, "identifier-and-mapping-information"], [844, "identifier-and-mapping-information"], [845, "identifier-and-mapping-information"], [846, "identifier-and-mapping-information"], [847, "identifier-and-mapping-information"], [848, "identifier-and-mapping-information"], [849, "identifier-and-mapping-information"], [850, "identifier-and-mapping-information"], [851, "identifier-and-mapping-information"], [852, "identifier-and-mapping-information"], [853, "identifier-and-mapping-information"], [854, "identifier-and-mapping-information"], [855, "identifier-and-mapping-information"], [856, "identifier-and-mapping-information"], [857, "identifier-and-mapping-information"], [858, "identifier-and-mapping-information"], [859, "identifier-and-mapping-information"], [860, "identifier-and-mapping-information"], [861, "identifier-and-mapping-information"], [862, "identifier-and-mapping-information"], [863, "identifier-and-mapping-information"], [864, "identifier-and-mapping-information"], [865, "identifier-and-mapping-information"], [866, "identifier-and-mapping-information"], [867, "identifier-and-mapping-information"], [868, "identifier-and-mapping-information"], [869, "identifier-and-mapping-information"], [870, "identifier-and-mapping-information"], [871, "identifier-and-mapping-information"], [872, "identifier-and-mapping-information"], [873, "identifier-and-mapping-information"], [874, "identifier-and-mapping-information"], [875, "identifier-and-mapping-information"], [876, "identifier-and-mapping-information"], [877, "identifier-and-mapping-information"], [878, "identifier-and-mapping-information"], [879, "identifier-and-mapping-information"], [880, "identifier-and-mapping-information"], [881, "identifier-and-mapping-information"], [882, "identifier-and-mapping-information"], [883, "identifier-and-mapping-information"], [884, "identifier-and-mapping-information"], [886, "identifier-and-mapping-information"], [887, "identifier-and-mapping-information"], [888, "identifier-and-mapping-information"], [889, "identifier-and-mapping-information"], [890, "identifier-and-mapping-information"], [891, "identifier-and-mapping-information"], [892, "identifier-and-mapping-information"], [893, "identifier-and-mapping-information"], [894, "identifier-and-mapping-information"], [895, "identifier-and-mapping-information"], [896, "identifier-and-mapping-information"], [897, "identifier-and-mapping-information"], [898, "identifier-and-mapping-information"], [899, "identifier-and-mapping-information"], [900, "identifier-and-mapping-information"], [901, "identifier-and-mapping-information"], [902, "identifier-and-mapping-information"], [903, "identifier-and-mapping-information"], [904, "identifier-and-mapping-information"], [905, "identifier-and-mapping-information"], [906, "identifier-and-mapping-information"], [907, "identifier-and-mapping-information"], [908, "identifier-and-mapping-information"], [909, "identifier-and-mapping-information"], [910, "identifier-and-mapping-information"], [911, "identifier-and-mapping-information"], [912, "identifier-and-mapping-information"], [914, "identifier-and-mapping-information"], [915, "identifier-and-mapping-information"], [916, "identifier-and-mapping-information"], [918, "identifier-and-mapping-information"], [919, "identifier-and-mapping-information"], [920, "identifier-and-mapping-information"], [921, "identifier-and-mapping-information"], [922, "identifier-and-mapping-information"], [923, "identifier-and-mapping-information"], [924, "identifier-and-mapping-information"], [925, "identifier-and-mapping-information"], [926, "identifier-and-mapping-information"], [927, "identifier-and-mapping-information"], [928, "identifier-and-mapping-information"], [929, "identifier-and-mapping-information"], [930, "identifier-and-mapping-information"], [931, "identifier-and-mapping-information"], [932, "identifier-and-mapping-information"], [933, "identifier-and-mapping-information"], [934, "identifier-and-mapping-information"], [935, "identifier-and-mapping-information"], [936, "identifier-and-mapping-information"], [937, "identifier-and-mapping-information"], [938, "identifier-and-mapping-information"], [939, "identifier-and-mapping-information"], [940, "identifier-and-mapping-information"], [941, "identifier-and-mapping-information"], [942, "identifier-and-mapping-information"], [943, "identifier-and-mapping-information"], [944, "identifier-and-mapping-information"], [945, "identifier-and-mapping-information"], [946, "identifier-and-mapping-information"], [947, "identifier-and-mapping-information"], [948, "identifier-and-mapping-information"], [949, "identifier-and-mapping-information"], [950, "identifier-and-mapping-information"], [951, "identifier-and-mapping-information"], [952, "identifier-and-mapping-information"], [953, "identifier-and-mapping-information"], [954, "identifier-and-mapping-information"], [955, "identifier-and-mapping-information"], [957, "identifier-and-mapping-information"], [958, "identifier-and-mapping-information"], [959, "identifier-and-mapping-information"], [960, "identifier-and-mapping-information"], [961, "identifier-and-mapping-information"], [962, "identifier-and-mapping-information"], [963, "identifier-and-mapping-information"], [964, "identifier-and-mapping-information"], [965, "identifier-and-mapping-information"], [966, "identifier-and-mapping-information"], [967, "identifier-and-mapping-information"], [968, "identifier-and-mapping-information"], [969, "identifier-and-mapping-information"], [971, "identifier-and-mapping-information"], [972, "identifier-and-mapping-information"], [973, "identifier-and-mapping-information"], [974, "identifier-and-mapping-information"], [975, "identifier-and-mapping-information"], [976, "identifier-and-mapping-information"], [977, "identifier-and-mapping-information"], [978, "identifier-and-mapping-information"], [979, "identifier-and-mapping-information"], [980, "identifier-and-mapping-information"], [981, "identifier-and-mapping-information"], [982, "identifier-and-mapping-information"], [983, "identifier-and-mapping-information"], [984, "identifier-and-mapping-information"], [985, "identifier-and-mapping-information"], [986, "identifier-and-mapping-information"], [987, "identifier-and-mapping-information"], [988, "identifier-and-mapping-information"], [989, "identifier-and-mapping-information"], [990, "identifier-and-mapping-information"], [991, "identifier-and-mapping-information"], [992, "identifier-and-mapping-information"], [993, "identifier-and-mapping-information"], [994, "identifier-and-mapping-information"], [995, "identifier-and-mapping-information"], [996, "identifier-and-mapping-information"], [997, "identifier-and-mapping-information"], [998, "identifier-and-mapping-information"], [999, "identifier-and-mapping-information"], [1000, "identifier-and-mapping-information"], [1001, "identifier-and-mapping-information"], [1002, "identifier-and-mapping-information"], [1003, "identifier-and-mapping-information"], [1005, "identifier-and-mapping-information"], [1006, "identifier-and-mapping-information"], [1007, "identifier-and-mapping-information"], [1008, "identifier-and-mapping-information"], [1009, "identifier-and-mapping-information"], [1010, "identifier-and-mapping-information"], [1011, "identifier-and-mapping-information"], [1012, "identifier-and-mapping-information"], [1013, "identifier-and-mapping-information"], [1014, "identifier-and-mapping-information"], [1015, "identifier-and-mapping-information"], [1016, "identifier-and-mapping-information"], [1017, "identifier-and-mapping-information"], [1018, "identifier-and-mapping-information"], [1019, "identifier-and-mapping-information"], [1020, "identifier-and-mapping-information"], [1021, "identifier-and-mapping-information"], [1022, "identifier-and-mapping-information"], [1023, "identifier-and-mapping-information"], [1024, "identifier-and-mapping-information"], [1025, "identifier-and-mapping-information"], [1026, "identifier-and-mapping-information"], [1028, "identifier-and-mapping-information"], [1030, "identifier-and-mapping-information"], [1031, "identifier-and-mapping-information"], [1032, "identifier-and-mapping-information"], [1033, "identifier-and-mapping-information"], [1034, "identifier-and-mapping-information"], [1035, "identifier-and-mapping-information"], [1036, "identifier-and-mapping-information"], [1037, "identifier-and-mapping-information"], [1038, "identifier-and-mapping-information"], [1039, "identifier-and-mapping-information"], [1040, "identifier-and-mapping-information"], [1041, "identifier-and-mapping-information"], [1042, "identifier-and-mapping-information"], [1043, "identifier-and-mapping-information"], [1044, "identifier-and-mapping-information"], [1045, "identifier-and-mapping-information"], [1046, "identifier-and-mapping-information"], [1047, "identifier-and-mapping-information"], [1048, "identifier-and-mapping-information"], [1049, "identifier-and-mapping-information"], [1050, "identifier-and-mapping-information"], [1051, "identifier-and-mapping-information"], [1052, "identifier-and-mapping-information"], [1053, "identifier-and-mapping-information"], [1054, "identifier-and-mapping-information"], [1055, "identifier-and-mapping-information"], [1056, "identifier-and-mapping-information"], [1057, "identifier-and-mapping-information"], [1058, "identifier-and-mapping-information"], [1059, "identifier-and-mapping-information"], [1060, "identifier-and-mapping-information"], [1061, "identifier-and-mapping-information"], [1062, "identifier-and-mapping-information"], [1063, "identifier-and-mapping-information"], [1064, "identifier-and-mapping-information"], [1065, "identifier-and-mapping-information"], [1066, "identifier-and-mapping-information"], [1067, "identifier-and-mapping-information"], [1068, "identifier-and-mapping-information"], [1069, "identifier-and-mapping-information"], [1071, "identifier-and-mapping-information"], [1072, "identifier-and-mapping-information"], [1073, "identifier-and-mapping-information"], [1074, "identifier-and-mapping-information"], [1075, "identifier-and-mapping-information"], [1076, "identifier-and-mapping-information"], [1077, "identifier-and-mapping-information"], [1078, "identifier-and-mapping-information"], [1079, "identifier-and-mapping-information"], [1080, "identifier-and-mapping-information"], [1081, "identifier-and-mapping-information"], [1082, "identifier-and-mapping-information"], [1083, "identifier-and-mapping-information"], [1084, "identifier-and-mapping-information"], [1085, "identifier-and-mapping-information"], [1086, "identifier-and-mapping-information"], [1087, "identifier-and-mapping-information"], [1088, "identifier-and-mapping-information"], [1089, "identifier-and-mapping-information"], [1090, "identifier-and-mapping-information"], [1091, "identifier-and-mapping-information"], [1092, "identifier-and-mapping-information"], [1093, "identifier-and-mapping-information"], [1094, "identifier-and-mapping-information"], [1095, "identifier-and-mapping-information"], [1096, "identifier-and-mapping-information"], [1097, "identifier-and-mapping-information"], [1099, "identifier-and-mapping-information"], [1100, "identifier-and-mapping-information"]], "Schema Source": [[3, "schema-source"], [4, "schema-source"], [5, "schema-source"], [6, "schema-source"], [7, "schema-source"], [8, "schema-source"], [9, "schema-source"], [10, "schema-source"], [11, "schema-source"], [12, "schema-source"], [13, "schema-source"], [14, "schema-source"], [15, "schema-source"], [16, "schema-source"], [17, "schema-source"], [18, "schema-source"], [19, "schema-source"], [20, "schema-source"], [21, "schema-source"], [22, "schema-source"], [23, "schema-source"], [24, "schema-source"], [25, "schema-source"], [26, "schema-source"], [27, "schema-source"], [28, "schema-source"], [29, "schema-source"], [30, "schema-source"], [32, "schema-source"], [33, "schema-source"], [34, "schema-source"], [35, "schema-source"], [36, "schema-source"], [37, "schema-source"], [38, "schema-source"], [39, "schema-source"], [40, "schema-source"], [41, "schema-source"], [42, "schema-source"], [43, "schema-source"], [44, "schema-source"], [45, "schema-source"], [47, "schema-source"], [48, "schema-source"], [49, "schema-source"], [50, "schema-source"], [51, "schema-source"], [52, "schema-source"], [53, "schema-source"], [54, "schema-source"], [55, "schema-source"], [56, "schema-source"], [57, "schema-source"], [58, "schema-source"], [59, "schema-source"], [60, "schema-source"], [61, "schema-source"], [62, "schema-source"], [63, "schema-source"], [64, "schema-source"], [65, "schema-source"], [66, "schema-source"], [67, "schema-source"], [68, "schema-source"], [69, "schema-source"], [70, "schema-source"], [71, "schema-source"], [72, "schema-source"], [73, "schema-source"], [74, "schema-source"], [75, "schema-source"], [76, "schema-source"], [77, "schema-source"], [78, "schema-source"], [79, "schema-source"], [80, "schema-source"], [81, "schema-source"], [82, "schema-source"], [83, "schema-source"], [84, "schema-source"], [85, "schema-source"], [86, "schema-source"], [87, "schema-source"], [88, "schema-source"], [89, "schema-source"], [90, "schema-source"], [91, "schema-source"], [92, "schema-source"], [93, "schema-source"], [94, "schema-source"], [95, "schema-source"], [96, "schema-source"], [97, "schema-source"], [98, "schema-source"], [99, "schema-source"], [100, "schema-source"], [101, "schema-source"], [102, "schema-source"], [103, "schema-source"], [104, "schema-source"], [105, "schema-source"], [106, "schema-source"], [107, "schema-source"], [108, "schema-source"], [109, "schema-source"], [110, "schema-source"], [111, "schema-source"], [112, "schema-source"], [113, "schema-source"], [114, "schema-source"], [115, "schema-source"], [116, "schema-source"], [117, "schema-source"], [118, "schema-source"], [119, "schema-source"], [121, "schema-source"], [122, "schema-source"], [123, "schema-source"], [124, "schema-source"], [125, "schema-source"], [126, "schema-source"], [128, "schema-source"], [129, "schema-source"], [130, "schema-source"], [131, "schema-source"], [132, "schema-source"], [133, "schema-source"], [134, "schema-source"], [135, "schema-source"], [136, "schema-source"], [137, "schema-source"], [138, "schema-source"], [139, "schema-source"], [140, "schema-source"], [141, "schema-source"], [142, "schema-source"], [143, "schema-source"], [144, "schema-source"], [145, "schema-source"], [146, "schema-source"], [147, "schema-source"], [148, "schema-source"], [149, "schema-source"], [150, "schema-source"], [151, "schema-source"], [152, "schema-source"], [153, "schema-source"], [154, "schema-source"], [155, "schema-source"], [156, "schema-source"], [157, "schema-source"], [158, "schema-source"], [159, "schema-source"], [160, "schema-source"], [161, "schema-source"], [162, "schema-source"], [163, "schema-source"], [166, "schema-source"], [167, "schema-source"], [168, "schema-source"], [169, "schema-source"], [170, "schema-source"], [172, "schema-source"], [173, "schema-source"], [175, "schema-source"], [176, "schema-source"], [177, "schema-source"], [178, "schema-source"], [179, "schema-source"], [181, "schema-source"], [182, "schema-source"], [183, "schema-source"], [184, "schema-source"], [185, "schema-source"], [186, "schema-source"], [187, "schema-source"], [188, "schema-source"], [190, "schema-source"], [191, "schema-source"], [193, "schema-source"], [194, "schema-source"], [195, "schema-source"], [196, "schema-source"], [198, "schema-source"], [199, "schema-source"], [200, "schema-source"], [201, "schema-source"], [205, "schema-source"], [206, "schema-source"], [207, "schema-source"], [208, "schema-source"], [209, "schema-source"], [210, "schema-source"], [211, "schema-source"], [212, "schema-source"], [213, "schema-source"], [214, "schema-source"], [215, "schema-source"], [216, "schema-source"], [217, "schema-source"], [218, "schema-source"], [219, "schema-source"], [220, "schema-source"], [221, "schema-source"], [222, "schema-source"], [223, "schema-source"], [224, "schema-source"], [225, "schema-source"], [226, "schema-source"], [227, "schema-source"], [228, "schema-source"], [229, "schema-source"], [230, "schema-source"], [232, "schema-source"], [234, "schema-source"], [235, "schema-source"], [237, "schema-source"], [239, "schema-source"], [240, "schema-source"], [241, "schema-source"], [242, "schema-source"], [244, "schema-source"], [245, "schema-source"], [246, "schema-source"], [247, "schema-source"], [248, "schema-source"], [249, "schema-source"], [251, "schema-source"], [252, "schema-source"], [253, "schema-source"], [254, "schema-source"], [255, "schema-source"], [256, "schema-source"], [257, "schema-source"], [258, "schema-source"], [259, "schema-source"], [260, "schema-source"], [261, "schema-source"], [262, "schema-source"], [263, "schema-source"], [264, "schema-source"], [265, "schema-source"], [266, "schema-source"], [267, "schema-source"], [268, "schema-source"], [269, "schema-source"], [270, "schema-source"], [271, "schema-source"], [272, "schema-source"], [273, "schema-source"], [274, "schema-source"], [275, "schema-source"], [276, "schema-source"], [277, "schema-source"], [278, "schema-source"], [279, "schema-source"], [280, "schema-source"], [284, "schema-source"], [285, "schema-source"], [286, "schema-source"], [287, "schema-source"], [288, "schema-source"], [289, "schema-source"], [290, "schema-source"], [291, "schema-source"], [292, "schema-source"], [293, "schema-source"], [294, "schema-source"], [296, "schema-source"], [297, "schema-source"], [298, "schema-source"], [299, "schema-source"], [300, "schema-source"], [301, "schema-source"], [302, "schema-source"], [303, "schema-source"], [304, "schema-source"], [305, "schema-source"], [306, "schema-source"], [307, "schema-source"], [308, "schema-source"], [309, "schema-source"], [310, "schema-source"], [311, "schema-source"], [312, "schema-source"], [313, "schema-source"], [314, "schema-source"], [315, "schema-source"], [316, "schema-source"], [317, "schema-source"], [318, "schema-source"], [319, "schema-source"], [320, "schema-source"], [321, "schema-source"], [322, "schema-source"], [323, "schema-source"], [324, "schema-source"], [325, "schema-source"], [326, "schema-source"], [327, "schema-source"], [328, "schema-source"], [329, "schema-source"], [330, "schema-source"], [332, "schema-source"], [333, "schema-source"], [334, "schema-source"], [336, "schema-source"], [341, "schema-source"], [342, "schema-source"], [343, "schema-source"], [344, "schema-source"], [345, "schema-source"], [346, "schema-source"], [347, "schema-source"], [348, "schema-source"], [349, "schema-source"], [350, "schema-source"], [351, "schema-source"], [352, "schema-source"], [353, "schema-source"], [354, "schema-source"], [355, "schema-source"], [356, "schema-source"], [357, "schema-source"], [359, "schema-source"], [360, "schema-source"], [361, "schema-source"], [363, "schema-source"], [364, "schema-source"], [365, "schema-source"], [366, "schema-source"], [367, "schema-source"], [368, "schema-source"], [369, "schema-source"], [370, "schema-source"], [371, "schema-source"], [372, "schema-source"], [374, "schema-source"], [375, "schema-source"], [376, "schema-source"], [377, "schema-source"], [378, "schema-source"], [379, "schema-source"], [380, "schema-source"], [381, "schema-source"], [382, "schema-source"], [383, "schema-source"], [384, "schema-source"], [385, "schema-source"], [386, "schema-source"], [387, "schema-source"], [388, "schema-source"], [389, "schema-source"], [390, "schema-source"], [391, "schema-source"], [392, "schema-source"], [393, "schema-source"], [394, "schema-source"], [395, "schema-source"], [396, "schema-source"], [397, "schema-source"], [398, "schema-source"], [399, "schema-source"], [400, "schema-source"], [401, "schema-source"], [402, "schema-source"], [403, "schema-source"], [404, "schema-source"], [405, "schema-source"], [406, "schema-source"], [407, "schema-source"], [408, "schema-source"], [409, "schema-source"], [410, "schema-source"], [411, "schema-source"], [412, "schema-source"], [413, "schema-source"], [414, "schema-source"], [415, "schema-source"], [416, "schema-source"], [417, "schema-source"], [418, "schema-source"], [419, "schema-source"], [420, "schema-source"], [421, "schema-source"], [422, "schema-source"], [423, "schema-source"], [424, "schema-source"], [425, "schema-source"], [426, "schema-source"], [427, "schema-source"], [428, "schema-source"], [429, "schema-source"], [430, "schema-source"], [431, "schema-source"], [432, "schema-source"], [433, "schema-source"], [434, "schema-source"], [435, "schema-source"], [436, "schema-source"], [437, "schema-source"], [438, "schema-source"], [439, "schema-source"], [441, "schema-source"], [443, "schema-source"], [444, "schema-source"], [445, "schema-source"], [446, "schema-source"], [447, "schema-source"], [448, "schema-source"], [449, "schema-source"], [450, "schema-source"], [453, "schema-source"], [454, "schema-source"], [455, "schema-source"], [456, "schema-source"], [457, "schema-source"], [458, "schema-source"], [459, "schema-source"], [460, "schema-source"], [461, "schema-source"], [462, "schema-source"], [463, "schema-source"], [464, "schema-source"], [465, "schema-source"], [466, "schema-source"], [467, "schema-source"], [468, "schema-source"], [469, "schema-source"], [470, "schema-source"], [471, "schema-source"], [473, "schema-source"], [474, "schema-source"], [475, "schema-source"], [476, "schema-source"], [477, "schema-source"], [478, "schema-source"], [479, "schema-source"], [480, "schema-source"], [481, "schema-source"], [482, "schema-source"], [483, "schema-source"], [484, "schema-source"], [485, "schema-source"], [486, "schema-source"], [487, "schema-source"], [488, "schema-source"], [489, "schema-source"], [490, "schema-source"], [491, "schema-source"], [492, "schema-source"], [493, "schema-source"], [494, "schema-source"], [495, "schema-source"], [496, "schema-source"], [497, "schema-source"], [498, "schema-source"], [499, "schema-source"], [500, "schema-source"], [501, "schema-source"], [502, "schema-source"], [503, "schema-source"], [504, "schema-source"], [505, "schema-source"], [506, "schema-source"], [507, "schema-source"], [508, "schema-source"], [509, "schema-source"], [510, "schema-source"], [511, "schema-source"], [512, "schema-source"], [513, "schema-source"], [514, "schema-source"], [515, "schema-source"], [516, "schema-source"], [517, "schema-source"], [518, "schema-source"], [519, "schema-source"], [520, "schema-source"], [521, "schema-source"], [522, "schema-source"], [523, "schema-source"], [524, "schema-source"], [525, "schema-source"], [526, "schema-source"], [527, "schema-source"], [528, "schema-source"], [529, "schema-source"], [530, "schema-source"], [531, "schema-source"], [532, "schema-source"], [533, "schema-source"], [534, "schema-source"], [535, "schema-source"], [536, "schema-source"], [538, "schema-source"], [539, "schema-source"], [540, "schema-source"], [541, "schema-source"], [542, "schema-source"], [543, "schema-source"], [544, "schema-source"], [545, "schema-source"], [546, "schema-source"], [547, "schema-source"], [548, "schema-source"], [549, "schema-source"], [550, "schema-source"], [551, "schema-source"], [552, "schema-source"], [553, "schema-source"], [554, "schema-source"], [555, "schema-source"], [556, "schema-source"], [557, "schema-source"], [558, "schema-source"], [559, "schema-source"], [560, "schema-source"], [561, "schema-source"], [562, "schema-source"], [563, "schema-source"], [564, "schema-source"], [565, "schema-source"], [566, "schema-source"], [567, "schema-source"], [568, "schema-source"], [569, "schema-source"], [570, "schema-source"], [571, "schema-source"], [572, "schema-source"], [573, "schema-source"], [574, "schema-source"], [575, "schema-source"], [576, "schema-source"], [577, "schema-source"], [578, "schema-source"], [579, "schema-source"], [580, "schema-source"], [581, "schema-source"], [582, "schema-source"], [583, "schema-source"], [584, "schema-source"], [585, "schema-source"], [586, "schema-source"], [587, "schema-source"], [588, "schema-source"], [589, "schema-source"], [590, "schema-source"], [591, "schema-source"], [592, "schema-source"], [593, "schema-source"], [594, "schema-source"], [595, "schema-source"], [596, "schema-source"], [597, "schema-source"], [598, "schema-source"], [599, "schema-source"], [600, "schema-source"], [601, "schema-source"], [602, "schema-source"], [603, "schema-source"], [604, "schema-source"], [605, "schema-source"], [606, "schema-source"], [607, "schema-source"], [608, "schema-source"], [609, "schema-source"], [610, "schema-source"], [611, "schema-source"], [612, "schema-source"], [613, "schema-source"], [614, "schema-source"], [615, "schema-source"], [617, "schema-source"], [618, "schema-source"], [619, "schema-source"], [620, "schema-source"], [621, "schema-source"], [622, "schema-source"], [623, "schema-source"], [624, "schema-source"], [625, "schema-source"], [626, "schema-source"], [627, "schema-source"], [628, "schema-source"], [629, "schema-source"], [630, "schema-source"], [631, "schema-source"], [632, "schema-source"], [633, "schema-source"], [634, "schema-source"], [635, "schema-source"], [636, "schema-source"], [637, "schema-source"], [638, "schema-source"], [639, "schema-source"], [640, "schema-source"], [641, "schema-source"], [642, "schema-source"], [643, "schema-source"], [644, "schema-source"], [646, "schema-source"], [647, "schema-source"], [648, "schema-source"], [649, "schema-source"], [650, "schema-source"], [651, "schema-source"], [652, "schema-source"], [653, "schema-source"], [654, "schema-source"], [655, "schema-source"], [656, "schema-source"], [657, "schema-source"], [658, "schema-source"], [659, "schema-source"], [660, "schema-source"], [661, "schema-source"], [662, "schema-source"], [663, "schema-source"], [664, "schema-source"], [665, "schema-source"], [666, "schema-source"], [667, "schema-source"], [668, "schema-source"], [669, "schema-source"], [670, "schema-source"], [671, "schema-source"], [673, "schema-source"], [674, "schema-source"], [675, "schema-source"], [676, "schema-source"], [677, "schema-source"], [678, "schema-source"], [679, "schema-source"], [680, "schema-source"], [681, "schema-source"], [682, "schema-source"], [683, "schema-source"], [684, "schema-source"], [685, "schema-source"], [686, "schema-source"], [687, "schema-source"], [688, "schema-source"], [689, "schema-source"], [690, "schema-source"], [691, "schema-source"], [692, "schema-source"], [693, "schema-source"], [694, "schema-source"], [695, "schema-source"], [696, "schema-source"], [697, "schema-source"], [698, "schema-source"], [699, "schema-source"], [700, "schema-source"], [701, "schema-source"], [702, "schema-source"], [703, "schema-source"], [704, "schema-source"], [705, "schema-source"], [706, "schema-source"], [707, "schema-source"], [708, "schema-source"], [709, "schema-source"], [710, "schema-source"], [711, "schema-source"], [713, "schema-source"], [714, "schema-source"], [715, "schema-source"], [716, "schema-source"], [717, "schema-source"], [718, "schema-source"], [719, "schema-source"], [721, "schema-source"], [722, "schema-source"], [723, "schema-source"], [724, "schema-source"], [725, "schema-source"], [726, "schema-source"], [727, "schema-source"], [728, "schema-source"], [729, "schema-source"], [730, "schema-source"], [731, "schema-source"], [732, "schema-source"], [733, "schema-source"], [734, "schema-source"], [735, "schema-source"], [736, "schema-source"], [737, "schema-source"], [739, "schema-source"], [740, "schema-source"], [741, "schema-source"], [742, "schema-source"], [743, "schema-source"], [746, "schema-source"], [747, "schema-source"], [748, "schema-source"], [749, "schema-source"], [750, "schema-source"], [751, "schema-source"], [752, "schema-source"], [753, "schema-source"], [754, "schema-source"], [755, "schema-source"], [756, "schema-source"], [757, "schema-source"], [758, "schema-source"], [759, "schema-source"], [760, "schema-source"], [761, "schema-source"], [762, "schema-source"], [763, "schema-source"], [764, "schema-source"], [765, "schema-source"], [766, "schema-source"], [767, "schema-source"], [768, "schema-source"], [769, "schema-source"], [770, "schema-source"], [771, "schema-source"], [772, "schema-source"], [773, "schema-source"], [774, "schema-source"], [775, "schema-source"], [776, "schema-source"], [777, "schema-source"], [778, "schema-source"], [779, "schema-source"], [780, "schema-source"], [781, "schema-source"], [782, "schema-source"], [784, "schema-source"], [785, "schema-source"], [786, "schema-source"], [787, "schema-source"], [788, "schema-source"], [789, "schema-source"], [790, "schema-source"], [791, "schema-source"], [792, "schema-source"], [793, "schema-source"], [794, "schema-source"], [795, "schema-source"], [796, "schema-source"], [797, "schema-source"], [798, "schema-source"], [799, "schema-source"], [800, "schema-source"], [801, "schema-source"], [802, "schema-source"], [803, "schema-source"], [804, "schema-source"], [805, "schema-source"], [806, "schema-source"], [807, "schema-source"], [808, "schema-source"], [809, "schema-source"], [810, "schema-source"], [811, "schema-source"], [812, "schema-source"], [814, "schema-source"], [816, "schema-source"], [817, "schema-source"], [818, "schema-source"], [819, "schema-source"], [820, "schema-source"], [821, "schema-source"], [822, "schema-source"], [823, "schema-source"], [824, "schema-source"], [825, "schema-source"], [826, "schema-source"], [827, "schema-source"], [828, "schema-source"], [829, "schema-source"], [830, "schema-source"], [831, "schema-source"], [832, "schema-source"], [833, "schema-source"], [834, "schema-source"], [835, "schema-source"], [836, "schema-source"], [837, "schema-source"], [838, "schema-source"], [839, "schema-source"], [840, "schema-source"], [841, "schema-source"], [842, "schema-source"], [843, "schema-source"], [844, "schema-source"], [845, "schema-source"], [846, "schema-source"], [847, "schema-source"], [848, "schema-source"], [849, "schema-source"], [850, "schema-source"], [851, "schema-source"], [852, "schema-source"], [853, "schema-source"], [854, "schema-source"], [855, "schema-source"], [856, "schema-source"], [857, "schema-source"], [858, "schema-source"], [859, "schema-source"], [860, "schema-source"], [861, "schema-source"], [862, "schema-source"], [863, "schema-source"], [864, "schema-source"], [865, "schema-source"], [866, "schema-source"], [867, "schema-source"], [868, "schema-source"], [869, "schema-source"], [870, "schema-source"], [871, "schema-source"], [872, "schema-source"], [873, "schema-source"], [874, "schema-source"], [875, "schema-source"], [876, "schema-source"], [877, "schema-source"], [878, "schema-source"], [879, "schema-source"], [880, "schema-source"], [881, "schema-source"], [886, "schema-source"], [887, "schema-source"], [888, "schema-source"], [889, "schema-source"], [890, "schema-source"], [891, "schema-source"], [892, "schema-source"], [893, "schema-source"], [894, "schema-source"], [895, "schema-source"], [896, "schema-source"], [897, "schema-source"], [898, "schema-source"], [899, "schema-source"], [900, "schema-source"], [901, "schema-source"], [902, "schema-source"], [903, "schema-source"], [904, "schema-source"], [905, "schema-source"], [906, "schema-source"], [907, "schema-source"], [908, "schema-source"], [909, "schema-source"], [910, "schema-source"], [911, "schema-source"], [912, "schema-source"], [914, "schema-source"], [915, "schema-source"], [916, "schema-source"], [918, "schema-source"], [919, "schema-source"], [920, "schema-source"], [921, "schema-source"], [922, "schema-source"], [923, "schema-source"], [924, "schema-source"], [925, "schema-source"], [926, "schema-source"], [927, "schema-source"], [928, "schema-source"], [929, "schema-source"], [930, "schema-source"], [931, "schema-source"], [932, "schema-source"], [933, "schema-source"], [934, "schema-source"], [935, "schema-source"], [936, "schema-source"], [937, "schema-source"], [938, "schema-source"], [939, "schema-source"], [940, "schema-source"], [941, "schema-source"], [942, "schema-source"], [943, "schema-source"], [944, "schema-source"], [945, "schema-source"], [946, "schema-source"], [947, "schema-source"], [948, "schema-source"], [949, "schema-source"], [950, "schema-source"], [951, "schema-source"], [952, "schema-source"], [953, "schema-source"], [954, "schema-source"], [955, "schema-source"], [957, "schema-source"], [958, "schema-source"], [959, "schema-source"], [960, "schema-source"], [961, "schema-source"], [962, "schema-source"], [963, "schema-source"], [964, "schema-source"], [965, "schema-source"], [966, "schema-source"], [967, "schema-source"], [968, "schema-source"], [969, "schema-source"], [971, "schema-source"], [972, "schema-source"], [973, "schema-source"], [974, "schema-source"], [975, "schema-source"], [976, "schema-source"], [977, "schema-source"], [978, "schema-source"], [979, "schema-source"], [980, "schema-source"], [981, "schema-source"], [982, "schema-source"], [983, "schema-source"], [984, "schema-source"], [985, "schema-source"], [986, "schema-source"], [987, "schema-source"], [988, "schema-source"], [989, "schema-source"], [990, "schema-source"], [991, "schema-source"], [992, "schema-source"], [993, "schema-source"], [994, "schema-source"], [995, "schema-source"], [996, "schema-source"], [997, "schema-source"], [998, "schema-source"], [999, "schema-source"], [1000, "schema-source"], [1001, "schema-source"], [1002, "schema-source"], [1003, "schema-source"], [1005, "schema-source"], [1006, "schema-source"], [1007, "schema-source"], [1008, "schema-source"], [1009, "schema-source"], [1011, "schema-source"], [1012, "schema-source"], [1013, "schema-source"], [1014, "schema-source"], [1015, "schema-source"], [1016, "schema-source"], [1017, "schema-source"], [1018, "schema-source"], [1019, "schema-source"], [1020, "schema-source"], [1021, "schema-source"], [1022, "schema-source"], [1023, "schema-source"], [1024, "schema-source"], [1025, "schema-source"], [1026, "schema-source"], [1028, "schema-source"], [1030, "schema-source"], [1031, "schema-source"], [1032, "schema-source"], [1033, "schema-source"], [1034, "schema-source"], [1035, "schema-source"], [1036, "schema-source"], [1037, "schema-source"], [1038, "schema-source"], [1039, "schema-source"], [1040, "schema-source"], [1041, "schema-source"], [1042, "schema-source"], [1043, "schema-source"], [1044, "schema-source"], [1045, "schema-source"], [1046, "schema-source"], [1047, "schema-source"], [1048, "schema-source"], [1049, "schema-source"], [1050, "schema-source"], [1051, "schema-source"], [1052, "schema-source"], [1053, "schema-source"], [1054, "schema-source"], [1055, "schema-source"], [1056, "schema-source"], [1057, "schema-source"], [1058, "schema-source"], [1059, "schema-source"], [1060, "schema-source"], [1061, "schema-source"], [1062, "schema-source"], [1063, "schema-source"], [1064, "schema-source"], [1065, "schema-source"], [1066, "schema-source"], [1067, "schema-source"], [1068, "schema-source"], [1069, "schema-source"], [1071, "schema-source"], [1072, "schema-source"], [1073, "schema-source"], [1074, "schema-source"], [1075, "schema-source"], [1076, "schema-source"], [1077, "schema-source"], [1078, "schema-source"], [1079, "schema-source"], [1080, "schema-source"], [1081, "schema-source"], [1082, "schema-source"], [1083, "schema-source"], [1084, "schema-source"], [1085, "schema-source"], [1086, "schema-source"], [1087, "schema-source"], [1088, "schema-source"], [1089, "schema-source"], [1090, "schema-source"], [1091, "schema-source"], [1092, "schema-source"], [1093, "schema-source"], [1094, "schema-source"], [1095, "schema-source"], [1096, "schema-source"], [1097, "schema-source"], [1099, "schema-source"], [1100, "schema-source"]], "LinkML Source": [[3, "linkml-source"], [4, "linkml-source"], [17, "linkml-source"], [20, "linkml-source"], [21, "linkml-source"], [22, "linkml-source"], [23, "linkml-source"], [24, "linkml-source"], [30, "linkml-source"], [32, "linkml-source"], [33, "linkml-source"], [34, "linkml-source"], [35, "linkml-source"], [36, "linkml-source"], [37, "linkml-source"], [38, "linkml-source"], [39, "linkml-source"], [40, "linkml-source"], [41, "linkml-source"], [42, "linkml-source"], [43, "linkml-source"], [44, "linkml-source"], [45, "linkml-source"], [47, "linkml-source"], [48, "linkml-source"], [49, "linkml-source"], [50, "linkml-source"], [51, "linkml-source"], [52, "linkml-source"], [53, "linkml-source"], [54, "linkml-source"], [55, "linkml-source"], [56, "linkml-source"], [57, "linkml-source"], [58, "linkml-source"], [59, "linkml-source"], [60, "linkml-source"], [61, "linkml-source"], [62, "linkml-source"], [63, "linkml-source"], [64, "linkml-source"], [65, "linkml-source"], [66, "linkml-source"], [67, "linkml-source"], [68, "linkml-source"], [69, "linkml-source"], [70, "linkml-source"], [71, "linkml-source"], [72, "linkml-source"], [73, "linkml-source"], [74, "linkml-source"], [75, "linkml-source"], [76, "linkml-source"], [77, "linkml-source"], [78, "linkml-source"], [79, "linkml-source"], [80, "linkml-source"], [81, "linkml-source"], [82, "linkml-source"], [83, "linkml-source"], [84, "linkml-source"], [85, "linkml-source"], [86, "linkml-source"], [87, "linkml-source"], [88, "linkml-source"], [89, "linkml-source"], [90, "linkml-source"], [91, "linkml-source"], [92, "linkml-source"], [94, "linkml-source"], [95, "linkml-source"], [96, "linkml-source"], [111, "linkml-source"], [117, "linkml-source"], [118, "linkml-source"], [119, "linkml-source"], [121, "linkml-source"], [122, "linkml-source"], [123, "linkml-source"], [124, "linkml-source"], [125, "linkml-source"], [126, "linkml-source"], [128, "linkml-source"], [129, "linkml-source"], [130, "linkml-source"], [131, "linkml-source"], [132, "linkml-source"], [133, "linkml-source"], [134, "linkml-source"], [135, "linkml-source"], [142, "linkml-source"], [150, "linkml-source"], [155, "linkml-source"], [159, "linkml-source"], [163, "linkml-source"], [166, "linkml-source"], [167, "linkml-source"], [168, "linkml-source"], [169, "linkml-source"], [170, "linkml-source"], [172, "linkml-source"], [173, "linkml-source"], [175, "linkml-source"], [176, "linkml-source"], [177, "linkml-source"], [178, "linkml-source"], [179, "linkml-source"], [181, "linkml-source"], [182, "linkml-source"], [183, "linkml-source"], [184, "linkml-source"], [185, "linkml-source"], [186, "linkml-source"], [187, "linkml-source"], [188, "linkml-source"], [190, "linkml-source"], [191, "linkml-source"], [193, "linkml-source"], [194, "linkml-source"], [195, "linkml-source"], [196, "linkml-source"], [198, "linkml-source"], [199, "linkml-source"], [200, "linkml-source"], [201, "linkml-source"], [214, "linkml-source"], [215, "linkml-source"], [216, "linkml-source"], [219, "linkml-source"], [225, "linkml-source"], [229, "linkml-source"], [230, "linkml-source"], [231, "linkml-source"], [232, "linkml-source"], [233, "linkml-source"], [234, "linkml-source"], [235, "linkml-source"], [237, "linkml-source"], [239, "linkml-source"], [240, "linkml-source"], [241, "linkml-source"], [242, "linkml-source"], [243, "linkml-source"], [244, "linkml-source"], [245, "linkml-source"], [246, "linkml-source"], [247, "linkml-source"], [248, "linkml-source"], [249, "linkml-source"], [251, "linkml-source"], [252, "linkml-source"], [264, "linkml-source"], [265, "linkml-source"], [266, "linkml-source"], [267, "linkml-source"], [271, "linkml-source"], [275, "linkml-source"], [278, "linkml-source"], [279, "linkml-source"], [280, "linkml-source"], [284, "linkml-source"], [285, "linkml-source"], [286, "linkml-source"], [287, "linkml-source"], [288, "linkml-source"], [289, "linkml-source"], [290, "linkml-source"], [291, "linkml-source"], [292, "linkml-source"], [293, "linkml-source"], [294, "linkml-source"], [296, "linkml-source"], [297, "linkml-source"], [309, "linkml-source"], [310, "linkml-source"], [311, "linkml-source"], [312, "linkml-source"], [313, "linkml-source"], [314, "linkml-source"], [318, "linkml-source"], [319, "linkml-source"], [321, "linkml-source"], [322, "linkml-source"], [325, "linkml-source"], [326, "linkml-source"], [328, "linkml-source"], [331, "linkml-source"], [332, "linkml-source"], [333, "linkml-source"], [334, "linkml-source"], [336, "linkml-source"], [341, "linkml-source"], [342, "linkml-source"], [343, "linkml-source"], [344, "linkml-source"], [345, "linkml-source"], [346, "linkml-source"], [347, "linkml-source"], [348, "linkml-source"], [349, "linkml-source"], [350, "linkml-source"], [351, "linkml-source"], [352, "linkml-source"], [353, "linkml-source"], [354, "linkml-source"], [355, "linkml-source"], [356, "linkml-source"], [357, "linkml-source"], [358, "linkml-source"], [359, "linkml-source"], [360, "linkml-source"], [361, "linkml-source"], [362, "linkml-source"], [363, "linkml-source"], [364, "linkml-source"], [365, "linkml-source"], [366, "linkml-source"], [367, "linkml-source"], [368, "linkml-source"], [369, "linkml-source"], [370, "linkml-source"], [371, "linkml-source"], [372, "linkml-source"], [374, "linkml-source"], [375, "linkml-source"], [376, "linkml-source"], [383, "linkml-source"], [384, "linkml-source"], [385, "linkml-source"], [387, "linkml-source"], [388, "linkml-source"], [389, "linkml-source"], [391, "linkml-source"], [392, "linkml-source"], [396, "linkml-source"], [397, "linkml-source"], [399, "linkml-source"], [400, "linkml-source"], [405, "linkml-source"], [406, "linkml-source"], [407, "linkml-source"], [408, "linkml-source"], [409, "linkml-source"], [413, "linkml-source"], [414, "linkml-source"], [415, "linkml-source"], [420, "linkml-source"], [422, "linkml-source"], [423, "linkml-source"], [424, "linkml-source"], [425, "linkml-source"], [426, "linkml-source"], [427, "linkml-source"], [428, "linkml-source"], [429, "linkml-source"], [430, "linkml-source"], [431, "linkml-source"], [432, "linkml-source"], [433, "linkml-source"], [434, "linkml-source"], [435, "linkml-source"], [436, "linkml-source"], [437, "linkml-source"], [438, "linkml-source"], [439, "linkml-source"], [441, "linkml-source"], [443, "linkml-source"], [444, "linkml-source"], [445, "linkml-source"], [446, "linkml-source"], [447, "linkml-source"], [448, "linkml-source"], [449, "linkml-source"], [450, "linkml-source"], [453, "linkml-source"], [454, "linkml-source"], [455, "linkml-source"], [456, "linkml-source"], [457, "linkml-source"], [458, "linkml-source"], [459, "linkml-source"], [460, "linkml-source"], [461, "linkml-source"], [463, "linkml-source"], [465, "linkml-source"], [466, "linkml-source"], [467, "linkml-source"], [468, "linkml-source"], [469, "linkml-source"], [470, "linkml-source"], [471, "linkml-source"], [473, "linkml-source"], [474, "linkml-source"], [475, "linkml-source"], [476, "linkml-source"], [477, "linkml-source"], [478, "linkml-source"], [479, "linkml-source"], [482, "linkml-source"], [483, "linkml-source"], [484, "linkml-source"], [485, "linkml-source"], [486, "linkml-source"], [487, "linkml-source"], [488, "linkml-source"], [491, "linkml-source"], [492, "linkml-source"], [498, "linkml-source"], [500, "linkml-source"], [505, "linkml-source"], [506, "linkml-source"], [507, "linkml-source"], [508, "linkml-source"], [509, "linkml-source"], [510, "linkml-source"], [511, "linkml-source"], [512, "linkml-source"], [513, "linkml-source"], [514, "linkml-source"], [515, "linkml-source"], [521, "linkml-source"], [522, "linkml-source"], [523, "linkml-source"], [524, "linkml-source"], [525, "linkml-source"], [529, "linkml-source"], [530, "linkml-source"], [533, "linkml-source"], [535, "linkml-source"], [536, "linkml-source"], [538, "linkml-source"], [539, "linkml-source"], [540, "linkml-source"], [543, "linkml-source"], [544, "linkml-source"], [545, "linkml-source"], [548, "linkml-source"], [552, "linkml-source"], [553, "linkml-source"], [554, "linkml-source"], [555, "linkml-source"], [556, "linkml-source"], [557, "linkml-source"], [558, "linkml-source"], [559, "linkml-source"], [560, "linkml-source"], [561, "linkml-source"], [562, "linkml-source"], [563, "linkml-source"], [564, "linkml-source"], [565, "linkml-source"], [566, "linkml-source"], [567, "linkml-source"], [568, "linkml-source"], [569, "linkml-source"], [570, "linkml-source"], [571, "linkml-source"], [572, "linkml-source"], [573, "linkml-source"], [574, "linkml-source"], [575, "linkml-source"], [576, "linkml-source"], [577, "linkml-source"], [578, "linkml-source"], [579, "linkml-source"], [580, "linkml-source"], [581, "linkml-source"], [582, "linkml-source"], [583, "linkml-source"], [584, "linkml-source"], [585, "linkml-source"], [586, "linkml-source"], [587, "linkml-source"], [588, "linkml-source"], [589, "linkml-source"], [590, "linkml-source"], [591, "linkml-source"], [592, "linkml-source"], [593, "linkml-source"], [594, "linkml-source"], [595, "linkml-source"], [596, "linkml-source"], [597, "linkml-source"], [598, "linkml-source"], [599, "linkml-source"], [600, "linkml-source"], [601, "linkml-source"], [602, "linkml-source"], [603, "linkml-source"], [604, "linkml-source"], [605, "linkml-source"], [606, "linkml-source"], [607, "linkml-source"], [608, "linkml-source"], [609, "linkml-source"], [610, "linkml-source"], [611, "linkml-source"], [612, "linkml-source"], [613, "linkml-source"], [614, "linkml-source"], [615, "linkml-source"], [617, "linkml-source"], [618, "linkml-source"], [619, "linkml-source"], [620, "linkml-source"], [621, "linkml-source"], [622, "linkml-source"], [623, "linkml-source"], [624, "linkml-source"], [625, "linkml-source"], [626, "linkml-source"], [627, "linkml-source"], [628, "linkml-source"], [629, "linkml-source"], [630, "linkml-source"], [631, "linkml-source"], [632, "linkml-source"], [633, "linkml-source"], [634, "linkml-source"], [635, "linkml-source"], [636, "linkml-source"], [637, "linkml-source"], [638, "linkml-source"], [639, "linkml-source"], [640, "linkml-source"], [641, "linkml-source"], [642, "linkml-source"], [643, "linkml-source"], [644, "linkml-source"], [646, "linkml-source"], [647, "linkml-source"], [648, "linkml-source"], [649, "linkml-source"], [650, "linkml-source"], [651, "linkml-source"], [652, "linkml-source"], [653, "linkml-source"], [654, "linkml-source"], [655, "linkml-source"], [656, "linkml-source"], [657, "linkml-source"], [658, "linkml-source"], [659, "linkml-source"], [660, "linkml-source"], [661, "linkml-source"], [662, "linkml-source"], [663, "linkml-source"], [664, "linkml-source"], [665, "linkml-source"], [666, "linkml-source"], [667, "linkml-source"], [668, "linkml-source"], [669, "linkml-source"], [670, "linkml-source"], [671, "linkml-source"], [673, "linkml-source"], [674, "linkml-source"], [675, "linkml-source"], [676, "linkml-source"], [677, "linkml-source"], [679, "linkml-source"], [680, "linkml-source"], [688, "linkml-source"], [695, "linkml-source"], [696, "linkml-source"], [697, "linkml-source"], [698, "linkml-source"], [699, "linkml-source"], [701, "linkml-source"], [707, "linkml-source"], [708, "linkml-source"], [709, "linkml-source"], [710, "linkml-source"], [711, "linkml-source"], [712, "linkml-source"], [713, "linkml-source"], [714, "linkml-source"], [719, "linkml-source"], [721, "linkml-source"], [722, "linkml-source"], [723, "linkml-source"], [725, "linkml-source"], [726, "linkml-source"], [727, "linkml-source"], [728, "linkml-source"], [729, "linkml-source"], [730, "linkml-source"], [731, "linkml-source"], [732, "linkml-source"], [733, "linkml-source"], [734, "linkml-source"], [735, "linkml-source"], [736, "linkml-source"], [737, "linkml-source"], [739, "linkml-source"], [740, "linkml-source"], [741, "linkml-source"], [742, "linkml-source"], [743, "linkml-source"], [746, "linkml-source"], [764, "linkml-source"], [767, "linkml-source"], [768, "linkml-source"], [769, "linkml-source"], [774, "linkml-source"], [775, "linkml-source"], [776, "linkml-source"], [777, "linkml-source"], [778, "linkml-source"], [779, "linkml-source"], [780, "linkml-source"], [781, "linkml-source"], [782, "linkml-source"], [784, "linkml-source"], [785, "linkml-source"], [786, "linkml-source"], [787, "linkml-source"], [788, "linkml-source"], [789, "linkml-source"], [790, "linkml-source"], [791, "linkml-source"], [792, "linkml-source"], [793, "linkml-source"], [794, "linkml-source"], [795, "linkml-source"], [796, "linkml-source"], [797, "linkml-source"], [798, "linkml-source"], [799, "linkml-source"], [800, "linkml-source"], [801, "linkml-source"], [802, "linkml-source"], [803, "linkml-source"], [804, "linkml-source"], [805, "linkml-source"], [806, "linkml-source"], [807, "linkml-source"], [808, "linkml-source"], [809, "linkml-source"], [810, "linkml-source"], [811, "linkml-source"], [812, "linkml-source"], [814, "linkml-source"], [816, "linkml-source"], [818, "linkml-source"], [819, "linkml-source"], [820, "linkml-source"], [828, "linkml-source"], [831, "linkml-source"], [838, "linkml-source"], [842, "linkml-source"], [843, "linkml-source"], [845, "linkml-source"], [848, "linkml-source"], [849, "linkml-source"], [850, "linkml-source"], [851, "linkml-source"], [852, "linkml-source"], [857, "linkml-source"], [858, "linkml-source"], [859, "linkml-source"], [860, "linkml-source"], [863, "linkml-source"], [864, "linkml-source"], [865, "linkml-source"], [866, "linkml-source"], [867, "linkml-source"], [868, "linkml-source"], [869, "linkml-source"], [870, "linkml-source"], [871, "linkml-source"], [872, "linkml-source"], [873, "linkml-source"], [874, "linkml-source"], [875, "linkml-source"], [876, "linkml-source"], [877, "linkml-source"], [878, "linkml-source"], [879, "linkml-source"], [880, "linkml-source"], [882, "linkml-source"], [883, "linkml-source"], [884, "linkml-source"], [886, "linkml-source"], [887, "linkml-source"], [888, "linkml-source"], [889, "linkml-source"], [890, "linkml-source"], [891, "linkml-source"], [892, "linkml-source"], [893, "linkml-source"], [894, "linkml-source"], [895, "linkml-source"], [896, "linkml-source"], [897, "linkml-source"], [898, "linkml-source"], [899, "linkml-source"], [900, "linkml-source"], [901, "linkml-source"], [902, "linkml-source"], [903, "linkml-source"], [904, "linkml-source"], [905, "linkml-source"], [906, "linkml-source"], [907, "linkml-source"], [908, "linkml-source"], [909, "linkml-source"], [910, "linkml-source"], [911, "linkml-source"], [912, "linkml-source"], [914, "linkml-source"], [915, "linkml-source"], [916, "linkml-source"], [918, "linkml-source"], [919, "linkml-source"], [920, "linkml-source"], [921, "linkml-source"], [922, "linkml-source"], [923, "linkml-source"], [925, "linkml-source"], [939, "linkml-source"], [942, "linkml-source"], [943, "linkml-source"], [944, "linkml-source"], [945, "linkml-source"], [949, "linkml-source"], [950, "linkml-source"], [951, "linkml-source"], [952, "linkml-source"], [953, "linkml-source"], [954, "linkml-source"], [955, "linkml-source"], [957, "linkml-source"], [958, "linkml-source"], [959, "linkml-source"], [960, "linkml-source"], [961, "linkml-source"], [962, "linkml-source"], [963, "linkml-source"], [964, "linkml-source"], [965, "linkml-source"], [966, "linkml-source"], [967, "linkml-source"], [968, "linkml-source"], [969, "linkml-source"], [971, "linkml-source"], [972, "linkml-source"], [981, "linkml-source"], [991, "linkml-source"], [992, "linkml-source"], [993, "linkml-source"], [994, "linkml-source"], [996, "linkml-source"], [999, "linkml-source"], [1000, "linkml-source"], [1001, "linkml-source"], [1002, "linkml-source"], [1003, "linkml-source"], [1005, "linkml-source"], [1006, "linkml-source"], [1007, "linkml-source"], [1008, "linkml-source"], [1009, "linkml-source"], [1010, "linkml-source"], [1011, "linkml-source"], [1012, "linkml-source"], [1013, "linkml-source"], [1014, "linkml-source"], [1015, "linkml-source"], [1016, "linkml-source"], [1017, "linkml-source"], [1018, "linkml-source"], [1019, "linkml-source"], [1020, "linkml-source"], [1021, "linkml-source"], [1022, "linkml-source"], [1023, "linkml-source"], [1024, "linkml-source"], [1025, "linkml-source"], [1026, "linkml-source"], [1028, "linkml-source"], [1031, "linkml-source"], [1038, "linkml-source"], [1043, "linkml-source"], [1044, "linkml-source"], [1046, "linkml-source"], [1049, "linkml-source"], [1050, "linkml-source"], [1051, "linkml-source"], [1052, "linkml-source"], [1053, "linkml-source"], [1054, "linkml-source"], [1058, "linkml-source"], [1061, "linkml-source"], [1062, "linkml-source"], [1063, "linkml-source"], [1064, "linkml-source"], [1065, "linkml-source"], [1066, "linkml-source"], [1067, "linkml-source"], [1068, "linkml-source"], [1069, "linkml-source"], [1071, "linkml-source"], [1072, "linkml-source"], [1073, "linkml-source"], [1074, "linkml-source"], [1075, "linkml-source"], [1076, "linkml-source"], [1077, "linkml-source"], [1078, "linkml-source"], [1079, "linkml-source"], [1080, "linkml-source"], [1081, "linkml-source"], [1082, "linkml-source"], [1083, "linkml-source"], [1084, "linkml-source"], [1085, "linkml-source"], [1086, "linkml-source"], [1087, "linkml-source"], [1088, "linkml-source"], [1089, "linkml-source"], [1090, "linkml-source"], [1091, "linkml-source"], [1092, "linkml-source"], [1093, "linkml-source"], [1094, "linkml-source"], [1095, "linkml-source"], [1096, "linkml-source"], [1097, "linkml-source"], [1099, "linkml-source"], [1100, "linkml-source"]], "Direct": [[3, "direct"], [4, "direct"], [17, "direct"], [20, "direct"], [21, "direct"], [22, "direct"], [23, "direct"], [24, "direct"], [94, "direct"], [95, "direct"], [96, "direct"], [155, "direct"], [159, "direct"], [214, "direct"], [215, "direct"], [219, "direct"], [225, "direct"], [251, "direct"], [252, "direct"], [264, "direct"], [265, "direct"], [266, "direct"], [267, "direct"], [271, "direct"], [296, "direct"], [297, "direct"], [309, "direct"], [310, "direct"], [311, "direct"], [312, "direct"], [313, "direct"], [314, "direct"], [318, "direct"], [319, "direct"], [321, "direct"], [322, "direct"], [325, "direct"], [326, "direct"], [375, "direct"], [376, "direct"], [383, "direct"], [384, "direct"], [385, "direct"], [387, "direct"], [388, "direct"], [389, "direct"], [391, "direct"], [392, "direct"], [396, "direct"], [397, "direct"], [399, "direct"], [405, "direct"], [406, "direct"], [408, "direct"], [413, "direct"], [414, "direct"], [415, "direct"], [420, "direct"], [479, "direct"], [482, "direct"], [483, "direct"], [484, "direct"], [485, "direct"], [486, "direct"], [487, "direct"], [488, "direct"], [491, "direct"], [492, "direct"], [500, "direct"], [505, "direct"], [506, "direct"], [507, "direct"], [508, "direct"], [509, "direct"], [510, "direct"], [511, "direct"], [512, "direct"], [515, "direct"], [524, "direct"], [525, "direct"], [529, "direct"], [533, "direct"], [535, "direct"], [536, "direct"], [538, "direct"], [539, "direct"], [540, "direct"], [543, "direct"], [544, "direct"], [545, "direct"], [548, "direct"], [680, "direct"], [695, "direct"], [696, "direct"], [698, "direct"], [699, "direct"], [746, "direct"], [764, "direct"], [767, "direct"], [768, "direct"], [769, "direct"], [816, "direct"], [818, "direct"], [819, "direct"], [820, "direct"], [827, "direct"], [828, "direct"], [830, "direct"], [831, "direct"], [838, "direct"], [841, "direct"], [842, "direct"], [843, "direct"], [845, "direct"], [939, "direct"], [942, "direct"], [943, "direct"], [944, "direct"], [945, "direct"], [981, "direct"], [991, "direct"], [992, "direct"], [993, "direct"], [994, "direct"], [1031, "direct"], [1038, "direct"], [1043, "direct"], [1044, "direct"], [1046, "direct"], [1049, "direct"], [1050, "direct"], [1051, "direct"], [1052, "direct"], [1053, "direct"], [1058, "direct"], [1061, "direct"], [1062, "direct"], [1063, "direct"]], "Class: AssociationChange": [[4, "class-associationchange"]], "Comments": [[4, "comments"], [6, "comments"], [19, "comments"], [28, "comments"], [61, "comments"], [78, "comments"], [86, "comments"], [97, "comments"], [109, "comments"], [115, "comments"], [137, "comments"], [153, "comments"], [161, "comments"], [206, "comments"], [215, "comments"], [222, "comments"], [227, "comments"], [230, "comments"], [254, "comments"], [270, "comments"], [276, "comments"], [299, "comments"], [317, "comments"], [329, "comments"], [356, "comments"], [378, "comments"], [385, "comments"], [389, "comments"], [392, "comments"], [402, "comments"], [408, "comments"], [418, "comments"], [425, "comments"], [427, "comments"], [434, "comments"], [437, "comments"], [444, "comments"], [455, "comments"], [463, "comments"], [493, "comments"], [510, "comments"], [534, "comments"], [550, "comments"], [563, "comments"], [566, "comments"], [578, "comments"], [599, "comments"], [606, "comments"], [628, "comments"], [668, "comments"], [681, "comments"], [694, "comments"], [705, "comments"], [740, "comments"], [748, "comments"], [763, "comments"], [771, "comments"], [788, "comments"], [821, "comments"], [828, "comments"], [837, "comments"], [846, "comments"], [892, "comments"], [904, "comments"], [926, "comments"], [938, "comments"], [947, "comments"], [959, "comments"], [968, "comments"], [974, "comments"], [987, "comments"], [997, "comments"], [1032, "comments"], [1048, "comments"], [1059, "comments"]], "Type: Boolean": [[5, "type-boolean"], [93, "type-boolean"], [136, "type-boolean"], [205, "type-boolean"], [253, "type-boolean"], [298, "type-boolean"], [377, "type-boolean"], [489, "type-boolean"], [678, "type-boolean"], [747, "type-boolean"], [817, "type-boolean"], [924, "type-boolean"], [973, "type-boolean"], [1030, "type-boolean"]], "Type: Curie": [[6, "type-curie"], [97, "type-curie"], [137, "type-curie"], [206, "type-curie"], [254, "type-curie"], [299, "type-curie"], [378, "type-curie"], [493, "type-curie"], [681, "type-curie"], [748, "type-curie"], [821, "type-curie"], [926, "type-curie"], [974, "type-curie"], [1032, "type-curie"]], "Type: Date": [[7, "type-date"], [98, "type-date"], [138, "type-date"], [207, "type-date"], [255, "type-date"], [300, "type-date"], [379, "type-date"], [494, "type-date"], [682, "type-date"], [749, "type-date"], [822, "type-date"], [927, "type-date"], [975, "type-date"], [1033, "type-date"]], "Type: DateOrDatetime": [[8, "type-dateordatetime"], [99, "type-dateordatetime"], [139, "type-dateordatetime"], [208, "type-dateordatetime"], [256, "type-dateordatetime"], [301, "type-dateordatetime"], [380, "type-dateordatetime"], [495, "type-dateordatetime"], [683, "type-dateordatetime"], [750, "type-dateordatetime"], [823, "type-dateordatetime"], [928, "type-dateordatetime"], [976, "type-dateordatetime"], [1034, "type-dateordatetime"]], "Type: Datetime": [[9, "type-datetime"], [100, "type-datetime"], [140, "type-datetime"], [209, "type-datetime"], [257, "type-datetime"], [302, "type-datetime"], [381, "type-datetime"], [496, "type-datetime"], [684, "type-datetime"], [751, "type-datetime"], [824, "type-datetime"], [929, "type-datetime"], [977, "type-datetime"], [1035, "type-datetime"]], "Type: Decimal": [[10, "type-decimal"], [101, "type-decimal"], [141, "type-decimal"], [210, "type-decimal"], [258, "type-decimal"], [303, "type-decimal"], [382, "type-decimal"], [497, "type-decimal"], [685, "type-decimal"], [752, "type-decimal"], [825, "type-decimal"], [930, "type-decimal"], [978, "type-decimal"], [1036, "type-decimal"]], "Type: Double": [[11, "type-double"], [102, "type-double"], [143, "type-double"], [211, "type-double"], [259, "type-double"], [304, "type-double"], [386, "type-double"], [499, "type-double"], [686, "type-double"], [753, "type-double"], [826, "type-double"], [931, "type-double"], [979, "type-double"], [1037, "type-double"]], "Type: Float": [[12, "type-float"], [103, "type-float"], [145, "type-float"], [212, "type-float"], [260, "type-float"], [305, "type-float"], [390, "type-float"], [501, "type-float"], [687, "type-float"], [754, "type-float"], [829, "type-float"], [932, "type-float"], [980, "type-float"], [1039, "type-float"]], "Type: Integer": [[13, "type-integer"], [104, "type-integer"], [146, "type-integer"], [213, "type-integer"], [261, "type-integer"], [306, "type-integer"], [393, "type-integer"], [516, "type-integer"], [689, "type-integer"], [755, "type-integer"], [832, "type-integer"], [933, "type-integer"], [982, "type-integer"], [1040, "type-integer"]], "Type: Jsonpath": [[14, "type-jsonpath"], [105, "type-jsonpath"], [147, "type-jsonpath"], [217, "type-jsonpath"], [262, "type-jsonpath"], [307, "type-jsonpath"], [394, "type-jsonpath"], [518, "type-jsonpath"], [690, "type-jsonpath"], [757, "type-jsonpath"], [833, "type-jsonpath"], [934, "type-jsonpath"], [983, "type-jsonpath"], [1041, "type-jsonpath"]], "Type: Jsonpointer": [[15, "type-jsonpointer"], [106, "type-jsonpointer"], [148, "type-jsonpointer"], [218, "type-jsonpointer"], [263, "type-jsonpointer"], [308, "type-jsonpointer"], [395, "type-jsonpointer"], [519, "type-jsonpointer"], [691, "type-jsonpointer"], [758, "type-jsonpointer"], [834, "type-jsonpointer"], [935, "type-jsonpointer"], [984, "type-jsonpointer"], [1042, "type-jsonpointer"]], "Type: Ncname": [[16, "type-ncname"], [107, "type-ncname"], [151, "type-ncname"], [220, "type-ncname"], [268, "type-ncname"], [315, "type-ncname"], [398, "type-ncname"], [527, "type-ncname"], [692, "type-ncname"], [759, "type-ncname"], [835, "type-ncname"], [936, "type-ncname"], [985, "type-ncname"], [1045, "type-ncname"]], "Class: NegatedAssociation": [[17, "class-negatedassociation"]], "Type: Nodeidentifier": [[18, "type-nodeidentifier"], [108, "type-nodeidentifier"], [152, "type-nodeidentifier"], [221, "type-nodeidentifier"], [269, "type-nodeidentifier"], [316, "type-nodeidentifier"], [401, "type-nodeidentifier"], [528, "type-nodeidentifier"], [693, "type-nodeidentifier"], [761, "type-nodeidentifier"], [836, "type-nodeidentifier"], [937, "type-nodeidentifier"], [986, "type-nodeidentifier"], [1047, "type-nodeidentifier"]], "Type: Objectidentifier": [[19, "type-objectidentifier"], [109, "type-objectidentifier"], [153, "type-objectidentifier"], [222, "type-objectidentifier"], [270, "type-objectidentifier"], [317, "type-objectidentifier"], [402, "type-objectidentifier"], [534, "type-objectidentifier"], [694, "type-objectidentifier"], [763, "type-objectidentifier"], [837, "type-objectidentifier"], [938, "type-objectidentifier"], [987, "type-objectidentifier"], [1048, "type-objectidentifier"]], "Class: PairwiseCoAssociation": [[20, "class-pairwisecoassociation"]], "Class: ParserConfiguration": [[21, "class-parserconfiguration"]], "Class: PositiveOrNegativeAssociation": [[22, "class-positiveornegativeassociation"]], "Class: PropertyValue": [[23, "class-propertyvalue"], [408, "class-propertyvalue"]], "Class: RollupGroup": [[24, "class-rollupgroup"]], "Type: Sparqlpath": [[25, "type-sparqlpath"], [112, "type-sparqlpath"], [157, "type-sparqlpath"], [223, "type-sparqlpath"], [272, "type-sparqlpath"], [323, "type-sparqlpath"], [411, "type-sparqlpath"], [541, "type-sparqlpath"], [702, "type-sparqlpath"], [765, "type-sparqlpath"], [839, "type-sparqlpath"], [940, "type-sparqlpath"], [989, "type-sparqlpath"], [1055, "type-sparqlpath"]], "Type: String": [[26, "type-string"], [113, "type-string"], [158, "type-string"], [224, "type-string"], [273, "type-string"], [324, "type-string"], [412, "type-string"], [542, "type-string"], [703, "type-string"], [766, "type-string"], [840, "type-string"], [941, "type-string"], [990, "type-string"], [1056, "type-string"]], "Type: Time": [[27, "type-time"], [114, "type-time"], [160, "type-time"], [226, "type-time"], [274, "type-time"], [327, "type-time"], [417, "type-time"], [547, "type-time"], [704, "type-time"], [770, "type-time"], [844, "type-time"], [946, "type-time"], [995, "type-time"], [1057, "type-time"]], "Type: Uri": [[28, "type-uri"], [115, "type-uri"], [161, "type-uri"], [227, "type-uri"], [276, "type-uri"], [329, "type-uri"], [418, "type-uri"], [550, "type-uri"], [705, "type-uri"], [771, "type-uri"], [846, "type-uri"], [947, "type-uri"], [997, "type-uri"], [1059, "type-uri"]], "Type: Uriorcurie": [[29, "type-uriorcurie"], [116, "type-uriorcurie"], [162, "type-uriorcurie"], [228, "type-uriorcurie"], [277, "type-uriorcurie"], [330, "type-uriorcurie"], [419, "type-uriorcurie"], [551, "type-uriorcurie"], [706, "type-uriorcurie"], [772, "type-uriorcurie"], [847, "type-uriorcurie"], [948, "type-uriorcurie"], [998, "type-uriorcurie"], [1060, "type-uriorcurie"]], "Slot: aggregator_knowledge_source": [[30, "slot-aggregator-knowledge-source"]], "Applicable Classes": [[30, "applicable-classes"], [32, "applicable-classes"], [33, "applicable-classes"], [34, "applicable-classes"], [36, "applicable-classes"], [37, "applicable-classes"], [43, "applicable-classes"], [44, "applicable-classes"], [45, "applicable-classes"], [47, "applicable-classes"], [48, "applicable-classes"], [49, "applicable-classes"], [50, "applicable-classes"], [51, "applicable-classes"], [53, "applicable-classes"], [54, "applicable-classes"], [55, "applicable-classes"], [56, "applicable-classes"], [57, "applicable-classes"], [58, "applicable-classes"], [59, "applicable-classes"], [60, "applicable-classes"], [61, "applicable-classes"], [62, "applicable-classes"], [63, "applicable-classes"], [64, "applicable-classes"], [65, "applicable-classes"], [66, "applicable-classes"], [67, "applicable-classes"], [68, "applicable-classes"], [69, "applicable-classes"], [70, "applicable-classes"], [71, "applicable-classes"], [72, "applicable-classes"], [76, "applicable-classes"], [77, "applicable-classes"], [78, "applicable-classes"], [79, "applicable-classes"], [80, "applicable-classes"], [81, "applicable-classes"], [82, "applicable-classes"], [83, "applicable-classes"], [84, "applicable-classes"], [85, "applicable-classes"], [86, "applicable-classes"], [87, "applicable-classes"], [88, "applicable-classes"], [89, "applicable-classes"], [90, "applicable-classes"], [91, "applicable-classes"], [92, "applicable-classes"], [117, "applicable-classes"], [118, "applicable-classes"], [119, "applicable-classes"], [121, "applicable-classes"], [122, "applicable-classes"], [123, "applicable-classes"], [124, "applicable-classes"], [125, "applicable-classes"], [126, "applicable-classes"], [128, "applicable-classes"], [129, "applicable-classes"], [130, "applicable-classes"], [131, "applicable-classes"], [132, "applicable-classes"], [133, "applicable-classes"], [134, "applicable-classes"], [135, "applicable-classes"], [163, "applicable-classes"], [168, "applicable-classes"], [169, "applicable-classes"], [170, "applicable-classes"], [172, "applicable-classes"], [173, "applicable-classes"], [176, "applicable-classes"], [177, "applicable-classes"], [178, "applicable-classes"], [179, "applicable-classes"], [182, "applicable-classes"], [183, "applicable-classes"], [185, "applicable-classes"], [186, "applicable-classes"], [187, "applicable-classes"], [188, "applicable-classes"], [190, "applicable-classes"], [191, "applicable-classes"], [194, "applicable-classes"], [195, "applicable-classes"], [196, "applicable-classes"], [200, "applicable-classes"], [201, "applicable-classes"], [229, "applicable-classes"], [230, "applicable-classes"], [231, "applicable-classes"], [232, "applicable-classes"], [233, "applicable-classes"], [234, "applicable-classes"], [235, "applicable-classes"], [237, "applicable-classes"], [239, "applicable-classes"], [240, "applicable-classes"], [241, "applicable-classes"], [242, "applicable-classes"], [243, "applicable-classes"], [244, "applicable-classes"], [245, "applicable-classes"], [246, "applicable-classes"], [247, "applicable-classes"], [248, "applicable-classes"], [249, "applicable-classes"], [278, "applicable-classes"], [279, "applicable-classes"], [280, "applicable-classes"], [284, "applicable-classes"], [285, "applicable-classes"], [286, "applicable-classes"], [287, "applicable-classes"], [288, "applicable-classes"], [289, "applicable-classes"], [290, "applicable-classes"], [291, "applicable-classes"], [292, "applicable-classes"], [293, "applicable-classes"], [294, "applicable-classes"], [331, "applicable-classes"], [332, "applicable-classes"], [333, "applicable-classes"], [334, "applicable-classes"], [336, "applicable-classes"], [341, "applicable-classes"], [342, "applicable-classes"], [343, "applicable-classes"], [344, "applicable-classes"], [345, "applicable-classes"], [346, "applicable-classes"], [347, "applicable-classes"], [348, "applicable-classes"], [349, "applicable-classes"], [350, "applicable-classes"], [351, "applicable-classes"], [352, "applicable-classes"], [353, "applicable-classes"], [354, "applicable-classes"], [355, "applicable-classes"], [356, "applicable-classes"], [357, "applicable-classes"], [358, "applicable-classes"], [359, "applicable-classes"], [360, "applicable-classes"], [361, "applicable-classes"], [362, "applicable-classes"], [363, "applicable-classes"], [364, "applicable-classes"], [365, "applicable-classes"], [366, "applicable-classes"], [367, "applicable-classes"], [368, "applicable-classes"], [369, "applicable-classes"], [370, "applicable-classes"], [371, "applicable-classes"], [372, "applicable-classes"], [374, "applicable-classes"], [422, "applicable-classes"], [423, "applicable-classes"], [424, "applicable-classes"], [425, "applicable-classes"], [426, "applicable-classes"], [427, "applicable-classes"], [428, "applicable-classes"], [429, "applicable-classes"], [430, "applicable-classes"], [432, "applicable-classes"], [433, "applicable-classes"], [434, "applicable-classes"], [435, "applicable-classes"], [436, "applicable-classes"], [437, "applicable-classes"], [438, "applicable-classes"], [439, "applicable-classes"], [441, "applicable-classes"], [443, "applicable-classes"], [444, "applicable-classes"], [445, "applicable-classes"], [446, "applicable-classes"], [447, "applicable-classes"], [448, "applicable-classes"], [449, "applicable-classes"], [450, "applicable-classes"], [453, "applicable-classes"], [454, "applicable-classes"], [455, "applicable-classes"], [456, "applicable-classes"], [457, "applicable-classes"], [458, "applicable-classes"], [459, "applicable-classes"], [460, "applicable-classes"], [461, "applicable-classes"], [463, "applicable-classes"], [465, "applicable-classes"], [466, "applicable-classes"], [467, "applicable-classes"], [468, "applicable-classes"], [469, "applicable-classes"], [470, "applicable-classes"], [471, "applicable-classes"], [473, "applicable-classes"], [474, "applicable-classes"], [475, "applicable-classes"], [476, "applicable-classes"], [477, "applicable-classes"], [478, "applicable-classes"], [513, "applicable-classes"], [514, "applicable-classes"], [530, "applicable-classes"], [552, "applicable-classes"], [553, "applicable-classes"], [554, "applicable-classes"], [555, "applicable-classes"], [556, "applicable-classes"], [557, "applicable-classes"], [558, "applicable-classes"], [559, "applicable-classes"], [560, "applicable-classes"], [562, "applicable-classes"], [563, "applicable-classes"], [564, "applicable-classes"], [565, "applicable-classes"], [566, "applicable-classes"], [567, "applicable-classes"], [569, "applicable-classes"], [570, "applicable-classes"], [571, "applicable-classes"], [572, "applicable-classes"], [573, "applicable-classes"], [574, "applicable-classes"], [575, "applicable-classes"], [576, "applicable-classes"], [578, "applicable-classes"], [579, "applicable-classes"], [580, "applicable-classes"], [581, "applicable-classes"], [582, "applicable-classes"], [583, "applicable-classes"], [585, "applicable-classes"], [586, "applicable-classes"], [587, "applicable-classes"], [588, "applicable-classes"], [589, "applicable-classes"], [590, "applicable-classes"], [591, "applicable-classes"], [592, "applicable-classes"], [594, "applicable-classes"], [595, "applicable-classes"], [596, "applicable-classes"], [597, "applicable-classes"], [599, "applicable-classes"], [600, "applicable-classes"], [601, "applicable-classes"], [602, "applicable-classes"], [603, "applicable-classes"], [604, "applicable-classes"], [605, "applicable-classes"], [606, "applicable-classes"], [607, "applicable-classes"], [608, "applicable-classes"], [609, "applicable-classes"], [610, "applicable-classes"], [611, "applicable-classes"], [612, "applicable-classes"], [613, "applicable-classes"], [614, "applicable-classes"], [615, "applicable-classes"], [618, "applicable-classes"], [619, "applicable-classes"], [620, "applicable-classes"], [621, "applicable-classes"], [622, "applicable-classes"], [623, "applicable-classes"], [624, "applicable-classes"], [625, "applicable-classes"], [626, "applicable-classes"], [627, "applicable-classes"], [628, "applicable-classes"], [630, "applicable-classes"], [638, "applicable-classes"], [639, "applicable-classes"], [640, "applicable-classes"], [641, "applicable-classes"], [647, "applicable-classes"], [648, "applicable-classes"], [649, "applicable-classes"], [650, "applicable-classes"], [651, "applicable-classes"], [652, "applicable-classes"], [655, "applicable-classes"], [658, "applicable-classes"], [660, "applicable-classes"], [661, "applicable-classes"], [662, "applicable-classes"], [663, "applicable-classes"], [664, "applicable-classes"], [666, "applicable-classes"], [667, "applicable-classes"], [668, "applicable-classes"], [669, "applicable-classes"], [670, "applicable-classes"], [671, "applicable-classes"], [673, "applicable-classes"], [674, "applicable-classes"], [675, "applicable-classes"], [676, "applicable-classes"], [707, "applicable-classes"], [708, "applicable-classes"], [709, "applicable-classes"], [710, "applicable-classes"], [711, "applicable-classes"], [712, "applicable-classes"], [713, "applicable-classes"], [714, "applicable-classes"], [719, "applicable-classes"], [721, "applicable-classes"], [722, "applicable-classes"], [723, "applicable-classes"], [725, "applicable-classes"], [726, "applicable-classes"], [727, "applicable-classes"], [728, "applicable-classes"], [729, "applicable-classes"], [730, "applicable-classes"], [731, "applicable-classes"], [732, "applicable-classes"], [733, "applicable-classes"], [734, "applicable-classes"], [735, "applicable-classes"], [736, "applicable-classes"], [737, "applicable-classes"], [739, "applicable-classes"], [740, "applicable-classes"], [741, "applicable-classes"], [742, "applicable-classes"], [743, "applicable-classes"], [774, "applicable-classes"], [775, "applicable-classes"], [776, "applicable-classes"], [777, "applicable-classes"], [778, "applicable-classes"], [779, "applicable-classes"], [780, "applicable-classes"], [781, "applicable-classes"], [782, "applicable-classes"], [786, "applicable-classes"], [787, "applicable-classes"], [788, "applicable-classes"], [789, "applicable-classes"], [790, "applicable-classes"], [791, "applicable-classes"], [792, "applicable-classes"], [793, "applicable-classes"], [794, "applicable-classes"], [795, "applicable-classes"], [796, "applicable-classes"], [797, "applicable-classes"], [798, "applicable-classes"], [799, "applicable-classes"], [800, "applicable-classes"], [802, "applicable-classes"], [803, "applicable-classes"], [804, "applicable-classes"], [805, "applicable-classes"], [806, "applicable-classes"], [807, "applicable-classes"], [808, "applicable-classes"], [809, "applicable-classes"], [810, "applicable-classes"], [848, "applicable-classes"], [849, "applicable-classes"], [850, "applicable-classes"], [851, "applicable-classes"], [852, "applicable-classes"], [857, "applicable-classes"], [858, "applicable-classes"], [859, "applicable-classes"], [860, "applicable-classes"], [863, "applicable-classes"], [864, "applicable-classes"], [866, "applicable-classes"], [867, "applicable-classes"], [868, "applicable-classes"], [869, "applicable-classes"], [871, "applicable-classes"], [872, "applicable-classes"], [873, "applicable-classes"], [874, "applicable-classes"], [875, "applicable-classes"], [876, "applicable-classes"], [877, "applicable-classes"], [878, "applicable-classes"], [879, "applicable-classes"], [880, "applicable-classes"], [882, "applicable-classes"], [883, "applicable-classes"], [884, "applicable-classes"], [886, "applicable-classes"], [888, "applicable-classes"], [889, "applicable-classes"], [890, "applicable-classes"], [891, "applicable-classes"], [892, "applicable-classes"], [893, "applicable-classes"], [895, "applicable-classes"], [896, "applicable-classes"], [897, "applicable-classes"], [898, "applicable-classes"], [899, "applicable-classes"], [900, "applicable-classes"], [901, "applicable-classes"], [902, "applicable-classes"], [904, "applicable-classes"], [905, "applicable-classes"], [906, "applicable-classes"], [908, "applicable-classes"], [909, "applicable-classes"], [910, "applicable-classes"], [911, "applicable-classes"], [912, "applicable-classes"], [914, "applicable-classes"], [915, "applicable-classes"], [916, "applicable-classes"], [918, "applicable-classes"], [919, "applicable-classes"], [920, "applicable-classes"], [921, "applicable-classes"], [922, "applicable-classes"], [923, "applicable-classes"], [949, "applicable-classes"], [950, "applicable-classes"], [951, "applicable-classes"], [952, "applicable-classes"], [953, "applicable-classes"], [954, "applicable-classes"], [955, "applicable-classes"], [957, "applicable-classes"], [958, "applicable-classes"], [959, "applicable-classes"], [960, "applicable-classes"], [961, "applicable-classes"], [962, "applicable-classes"], [963, "applicable-classes"], [964, "applicable-classes"], [965, "applicable-classes"], [966, "applicable-classes"], [967, "applicable-classes"], [968, "applicable-classes"], [969, "applicable-classes"], [971, "applicable-classes"], [972, "applicable-classes"], [999, "applicable-classes"], [1000, "applicable-classes"], [1001, "applicable-classes"], [1002, "applicable-classes"], [1003, "applicable-classes"], [1005, "applicable-classes"], [1006, "applicable-classes"], [1007, "applicable-classes"], [1008, "applicable-classes"], [1009, "applicable-classes"], [1010, "applicable-classes"], [1011, "applicable-classes"], [1012, "applicable-classes"], [1013, "applicable-classes"], [1014, "applicable-classes"], [1015, "applicable-classes"], [1016, "applicable-classes"], [1017, "applicable-classes"], [1018, "applicable-classes"], [1019, "applicable-classes"], [1020, "applicable-classes"], [1021, "applicable-classes"], [1022, "applicable-classes"], [1023, "applicable-classes"], [1024, "applicable-classes"], [1025, "applicable-classes"], [1026, "applicable-classes"], [1028, "applicable-classes"], [1065, "applicable-classes"], [1066, "applicable-classes"], [1067, "applicable-classes"], [1068, "applicable-classes"], [1069, "applicable-classes"], [1071, "applicable-classes"], [1072, "applicable-classes"], [1073, "applicable-classes"], [1074, "applicable-classes"], [1075, "applicable-classes"], [1076, "applicable-classes"], [1077, "applicable-classes"], [1078, "applicable-classes"], [1079, "applicable-classes"], [1080, "applicable-classes"], [1081, "applicable-classes"], [1082, "applicable-classes"], [1083, "applicable-classes"], [1084, "applicable-classes"], [1085, "applicable-classes"], [1086, "applicable-classes"], [1087, "applicable-classes"], [1088, "applicable-classes"], [1089, "applicable-classes"], [1090, "applicable-classes"], [1091, "applicable-classes"], [1092, "applicable-classes"], [1093, "applicable-classes"], [1094, "applicable-classes"], [1095, "applicable-classes"], [1096, "applicable-classes"], [1097, "applicable-classes"], [1099, "applicable-classes"], [1100, "applicable-classes"]], "Properties": [[30, "properties"], [32, "properties"], [33, "properties"], [34, "properties"], [35, "properties"], [36, "properties"], [37, "properties"], [38, "properties"], [39, "properties"], [40, "properties"], [41, "properties"], [42, "properties"], [43, "properties"], [44, "properties"], [45, "properties"], [47, "properties"], [48, "properties"], [49, "properties"], [50, "properties"], [51, "properties"], [52, "properties"], [53, "properties"], [54, "properties"], [55, "properties"], [56, "properties"], [57, "properties"], [58, "properties"], [59, "properties"], [60, "properties"], [61, "properties"], [62, "properties"], [63, "properties"], [64, "properties"], [65, "properties"], [66, "properties"], [67, "properties"], [68, "properties"], [69, "properties"], [70, "properties"], [71, "properties"], [72, "properties"], [73, "properties"], [74, "properties"], [75, "properties"], [76, "properties"], [77, "properties"], [78, "properties"], [79, "properties"], [80, "properties"], [81, "properties"], [82, "properties"], [83, "properties"], [84, "properties"], [85, "properties"], [86, "properties"], [87, "properties"], [88, "properties"], [89, "properties"], [90, "properties"], [91, "properties"], [92, "properties"], [117, "properties"], [118, "properties"], [119, "properties"], [121, "properties"], [122, "properties"], [123, "properties"], [124, "properties"], [125, "properties"], [126, "properties"], [128, "properties"], [129, "properties"], [130, "properties"], [131, "properties"], [132, "properties"], [133, "properties"], [134, "properties"], [135, "properties"], [163, "properties"], [166, "properties"], [167, "properties"], [168, "properties"], [169, "properties"], [170, "properties"], [171, "properties"], [172, "properties"], [173, "properties"], [174, "properties"], [175, "properties"], [176, "properties"], [177, "properties"], [178, "properties"], [179, "properties"], [180, "properties"], [181, "properties"], [182, "properties"], [183, "properties"], [184, "properties"], [185, "properties"], [186, "properties"], [187, "properties"], [188, "properties"], [189, "properties"], [190, "properties"], [191, "properties"], [192, "properties"], [193, "properties"], [194, "properties"], [195, "properties"], [196, "properties"], [197, "properties"], [198, "properties"], [199, "properties"], [200, "properties"], [201, "properties"], [229, "properties"], [230, "properties"], [231, "properties"], [232, "properties"], [233, "properties"], [234, "properties"], [235, "properties"], [237, "properties"], [239, "properties"], [240, "properties"], [241, "properties"], [242, "properties"], [243, "properties"], [244, "properties"], [245, "properties"], [246, "properties"], [247, "properties"], [248, "properties"], [249, "properties"], [278, "properties"], [279, "properties"], [280, "properties"], [284, "properties"], [285, "properties"], [286, "properties"], [287, "properties"], [288, "properties"], [289, "properties"], [290, "properties"], [291, "properties"], [292, "properties"], [293, "properties"], [294, "properties"], [331, "properties"], [332, "properties"], [333, "properties"], [334, "properties"], [336, "properties"], [341, "properties"], [342, "properties"], [343, "properties"], [344, "properties"], [345, "properties"], [346, "properties"], [347, "properties"], [348, "properties"], [349, "properties"], [350, "properties"], [351, "properties"], [352, "properties"], [353, "properties"], [354, "properties"], [355, "properties"], [356, "properties"], [357, "properties"], [358, "properties"], [359, "properties"], [360, "properties"], [361, "properties"], [362, "properties"], [363, "properties"], [364, "properties"], [365, "properties"], [366, "properties"], [367, "properties"], [368, "properties"], [369, "properties"], [370, "properties"], [371, "properties"], [372, "properties"], [374, "properties"], [422, "properties"], [423, "properties"], [424, "properties"], [425, "properties"], [426, "properties"], [427, "properties"], [428, "properties"], [429, "properties"], [430, "properties"], [431, "properties"], [432, "properties"], [433, "properties"], [434, "properties"], [435, "properties"], [436, "properties"], [437, "properties"], [438, "properties"], [439, "properties"], [441, "properties"], [442, "properties"], [443, "properties"], [444, "properties"], [445, "properties"], [446, "properties"], [447, "properties"], [448, "properties"], [449, "properties"], [450, "properties"], [453, "properties"], [454, "properties"], [455, "properties"], [456, "properties"], [457, "properties"], [458, "properties"], [459, "properties"], [460, "properties"], [461, "properties"], [462, "properties"], [463, "properties"], [464, "properties"], [465, "properties"], [466, "properties"], [467, "properties"], [468, "properties"], [469, "properties"], [470, "properties"], [471, "properties"], [473, "properties"], [474, "properties"], [475, "properties"], [476, "properties"], [477, "properties"], [478, "properties"], [513, "properties"], [514, "properties"], [521, "properties"], [522, "properties"], [523, "properties"], [530, "properties"], [552, "properties"], [553, "properties"], [554, "properties"], [555, "properties"], [556, "properties"], [557, "properties"], [558, "properties"], [559, "properties"], [560, "properties"], [561, "properties"], [562, "properties"], [563, "properties"], [564, "properties"], [565, "properties"], [566, "properties"], [567, "properties"], [568, "properties"], [569, "properties"], [570, "properties"], [571, "properties"], [572, "properties"], [573, "properties"], [574, "properties"], [575, "properties"], [576, "properties"], [577, "properties"], [578, "properties"], [579, "properties"], [580, "properties"], [581, "properties"], [582, "properties"], [583, "properties"], [584, "properties"], [585, "properties"], [586, "properties"], [587, "properties"], [588, "properties"], [589, "properties"], [590, "properties"], [591, "properties"], [592, "properties"], [593, "properties"], [594, "properties"], [595, "properties"], [596, "properties"], [597, "properties"], [598, "properties"], [599, "properties"], [600, "properties"], [601, "properties"], [602, "properties"], [603, "properties"], [604, "properties"], [605, "properties"], [606, "properties"], [607, "properties"], [608, "properties"], [609, "properties"], [610, "properties"], [611, "properties"], [612, "properties"], [613, "properties"], [614, "properties"], [615, "properties"], [617, "properties"], [618, "properties"], [619, "properties"], [620, "properties"], [621, "properties"], [622, "properties"], [623, "properties"], [624, "properties"], [625, "properties"], [626, "properties"], [627, "properties"], [628, "properties"], [629, "properties"], [630, "properties"], [631, "properties"], [632, "properties"], [633, "properties"], [634, "properties"], [635, "properties"], [636, "properties"], [637, "properties"], [638, "properties"], [639, "properties"], [640, "properties"], [641, "properties"], [642, "properties"], [643, "properties"], [644, "properties"], [646, "properties"], [647, "properties"], [648, "properties"], [649, "properties"], [650, "properties"], [651, "properties"], [652, "properties"], [653, "properties"], [654, "properties"], [655, "properties"], [656, "properties"], [657, "properties"], [658, "properties"], [659, "properties"], [660, "properties"], [661, "properties"], [662, "properties"], [663, "properties"], [664, "properties"], [665, "properties"], [666, "properties"], [667, "properties"], [668, "properties"], [669, "properties"], [670, "properties"], [671, "properties"], [673, "properties"], [674, "properties"], [675, "properties"], [676, "properties"], [677, "properties"], [707, "properties"], [708, "properties"], [709, "properties"], [710, "properties"], [711, "properties"], [712, "properties"], [713, "properties"], [714, "properties"], [715, "properties"], [716, "properties"], [717, "properties"], [718, "properties"], [719, "properties"], [721, "properties"], [722, "properties"], [723, "properties"], [724, "properties"], [725, "properties"], [726, "properties"], [727, "properties"], [728, "properties"], [729, "properties"], [730, "properties"], [731, "properties"], [732, "properties"], [733, "properties"], [734, "properties"], [735, "properties"], [736, "properties"], [737, "properties"], [739, "properties"], [740, "properties"], [741, "properties"], [742, "properties"], [743, "properties"], [774, "properties"], [775, "properties"], [776, "properties"], [777, "properties"], [778, "properties"], [779, "properties"], [780, "properties"], [781, "properties"], [782, "properties"], [784, "properties"], [785, "properties"], [786, "properties"], [787, "properties"], [788, "properties"], [789, "properties"], [790, "properties"], [791, "properties"], [792, "properties"], [793, "properties"], [794, "properties"], [795, "properties"], [796, "properties"], [797, "properties"], [798, "properties"], [799, "properties"], [800, "properties"], [801, "properties"], [802, "properties"], [803, "properties"], [804, "properties"], [805, "properties"], [806, "properties"], [807, "properties"], [808, "properties"], [809, "properties"], [810, "properties"], [811, "properties"], [812, "properties"], [814, "properties"], [848, "properties"], [849, "properties"], [850, "properties"], [851, "properties"], [852, "properties"], [853, "properties"], [854, "properties"], [855, "properties"], [856, "properties"], [857, "properties"], [858, "properties"], [859, "properties"], [860, "properties"], [861, "properties"], [862, "properties"], [863, "properties"], [864, "properties"], [865, "properties"], [866, "properties"], [867, "properties"], [868, "properties"], [869, "properties"], [870, "properties"], [871, "properties"], [872, "properties"], [873, "properties"], [874, "properties"], [875, "properties"], [876, "properties"], [877, "properties"], [878, "properties"], [879, "properties"], [880, "properties"], [881, "properties"], [882, "properties"], [883, "properties"], [884, "properties"], [886, "properties"], [887, "properties"], [888, "properties"], [889, "properties"], [890, "properties"], [891, "properties"], [892, "properties"], [893, "properties"], [894, "properties"], [895, "properties"], [896, "properties"], [897, "properties"], [898, "properties"], [899, "properties"], [900, "properties"], [901, "properties"], [902, "properties"], [903, "properties"], [904, "properties"], [905, "properties"], [906, "properties"], [907, "properties"], [908, "properties"], [909, "properties"], [910, "properties"], [911, "properties"], [912, "properties"], [914, "properties"], [915, "properties"], [916, "properties"], [918, "properties"], [919, "properties"], [920, "properties"], [921, "properties"], [922, "properties"], [923, "properties"], [949, "properties"], [950, "properties"], [951, "properties"], [952, "properties"], [953, "properties"], [954, "properties"], [955, "properties"], [957, "properties"], [958, "properties"], [959, "properties"], [960, "properties"], [961, "properties"], [962, "properties"], [963, "properties"], [964, "properties"], [965, "properties"], [966, "properties"], [967, "properties"], [968, "properties"], [969, "properties"], [971, "properties"], [972, "properties"], [999, "properties"], [1000, "properties"], [1001, "properties"], [1002, "properties"], [1003, "properties"], [1005, "properties"], [1006, "properties"], [1007, "properties"], [1008, "properties"], [1009, "properties"], [1010, "properties"], [1011, "properties"], [1012, "properties"], [1013, "properties"], [1014, "properties"], [1015, "properties"], [1016, "properties"], [1017, "properties"], [1018, "properties"], [1019, "properties"], [1020, "properties"], [1021, "properties"], [1022, "properties"], [1023, "properties"], [1024, "properties"], [1025, "properties"], [1026, "properties"], [1028, "properties"], [1065, "properties"], [1066, "properties"], [1067, "properties"], [1068, "properties"], [1069, "properties"], [1071, "properties"], [1072, "properties"], [1073, "properties"], [1074, "properties"], [1075, "properties"], [1076, "properties"], [1077, "properties"], [1078, "properties"], [1079, "properties"], [1080, "properties"], [1081, "properties"], [1082, "properties"], [1083, "properties"], [1084, "properties"], [1085, "properties"], [1086, "properties"], [1087, "properties"], [1088, "properties"], [1089, "properties"], [1090, "properties"], [1091, "properties"], [1092, "properties"], [1093, "properties"], [1094, "properties"], [1095, "properties"], [1096, "properties"], [1097, "properties"], [1099, "properties"], [1100, "properties"]], "association": [[31, "association"]], "Slot: associations": [[32, "slot-associations"]], "Slot: associations_for_subjects_in_common": [[33, "slot-associations-for-subjects-in-common"]], "Slot: closure_delta": [[34, "slot-closure-delta"]], "Slot: closure_information_content_delta": [[35, "slot-closure-information-content-delta"]], "Slot: closure_predicates": [[36, "slot-closure-predicates"]], "Slot: comments": [[37, "slot-comments"], [427, "slot-comments"], [951, "slot-comments"]], "Slot: core_triple": [[38, "slot-core-triple"]], "Slot: creation_date": [[39, "slot-creation-date"], [571, "slot-creation-date"]], "Slot: date": [[40, "slot-date"], [575, "slot-date"]], "Slot: denormalized_slot": [[41, "slot-denormalized-slot"]], "Mixin Usage": [[41, "mixin-usage"], [42, "mixin-usage"], [166, "mixin-usage"], [167, "mixin-usage"], [175, "mixin-usage"], [181, "mixin-usage"], [184, "mixin-usage"], [193, "mixin-usage"], [198, "mixin-usage"], [199, "mixin-usage"], [484, "mixin-usage"], [492, "mixin-usage"], [500, "mixin-usage"], [505, "mixin-usage"], [506, "mixin-usage"], [507, "mixin-usage"], [508, "mixin-usage"], [509, "mixin-usage"], [510, "mixin-usage"], [511, "mixin-usage"], [529, "mixin-usage"], [535, "mixin-usage"], [539, "mixin-usage"], [540, "mixin-usage"], [633, "mixin-usage"], [981, "mixin-usage"]], "Slot: diff_slot": [[42, "slot-diff-slot"]], "Slot: evidence_type": [[43, "slot-evidence-type"]], "Slot: group_object": [[44, "slot-group-object"]], "Slot: include_association_attributes": [[45, "slot-include-association-attributes"]], "OAK Association Data Model": [[46, "oak-association-data-model"]], "Classes": [[46, "classes"], [127, "classes"], [165, "classes"], [236, "classes"], [281, "classes"], [335, "classes"], [440, "classes"], [616, "classes"], [720, "classes"], [783, "classes"], [885, "classes"], [956, "classes"], [1004, "classes"], [1070, "classes"]], "Enumerations": [[46, "enumerations"], [127, "enumerations"], [165, "enumerations"], [236, "enumerations"], [281, "enumerations"], [335, "enumerations"], [440, "enumerations"], [616, "enumerations"], [720, "enumerations"], [783, "enumerations"], [885, "enumerations"], [956, "enumerations"], [1004, "enumerations"], [1070, "enumerations"]], "Types": [[46, "types"], [127, "types"], [165, "types"], [236, "types"], [281, "types"], [335, "types"], [440, "types"], [616, "types"], [720, "types"], [783, "types"], [885, "types"], [956, "types"], [1004, "types"], [1070, "types"]], "Slot: is_creation": [[47, "slot-is-creation"]], "Slot: is_deletion": [[48, "slot-is-deletion"]], "Slot: is_generalization": [[49, "slot-is-generalization"]], "Slot: is_migration": [[50, "slot-is-migration"]], "Slot: is_specialization": [[51, "slot-is-specialization"]], "Slot: modification_date": [[52, "slot-modification-date"]], "Slot: negated": [[53, "slot-negated"]], "Slot: new_date": [[54, "slot-new-date"]], "Slot: new_object": [[55, "slot-new-object"]], "Slot: new_predicate": [[56, "slot-new-predicate"]], "Slot: number_subject_unique_to_entity1": [[57, "slot-number-subject-unique-to-entity1"]], "Slot: number_subject_unique_to_entity2": [[58, "slot-number-subject-unique-to-entity2"]], "Slot: number_subjects_in_common": [[59, "slot-number-subjects-in-common"]], "Slot: number_subjects_in_union": [[60, "slot-number-subjects-in-union"]], "Slot: object": [[61, "slot-object"], [181, "slot-object"], [641, "slot-object"], [1076, "slot-object"]], "Slot: object1": [[62, "slot-object1"]], "Slot: object1_label": [[63, "slot-object1-label"]], "Slot: object2": [[64, "slot-object2"]], "Slot: object2_label": [[65, "slot-object2-label"]], "Slot: object_closure": [[66, "slot-object-closure"]], "Slot: object_closure_label": [[67, "slot-object-closure-label"]], "Slot: object_label": [[68, "slot-object-label"], [729, "slot-object-label"], [798, "slot-object-label"], [1015, "slot-object-label"]], "Slot: old_date": [[69, "slot-old-date"]], "Slot: old_object": [[70, "slot-old-object"]], "Slot: old_object_obsolete": [[71, "slot-old-object-obsolete"]], "Slot: old_predicate": [[72, "slot-old-predicate"]], "Slot: original_object": [[73, "slot-original-object"]], "Slot: original_predicate": [[74, "slot-original-predicate"]], "Slot: original_subject": [[75, "slot-original-subject"]], "Slot: predicate": [[76, "slot-predicate"], [184, "slot-predicate"], [288, "slot-predicate"], [355, "slot-predicate"], [651, "slot-predicate"], [960, "slot-predicate"], [1080, "slot-predicate"]], "Slot: predicate_label": [[77, "slot-predicate-label"]], "Slot: preserve_negated_associations": [[78, "slot-preserve-negated-associations"]], "Slot: primary_knowledge_source": [[79, "slot-primary-knowledge-source"]], "Slot: property_values": [[80, "slot-property-values"]], "Slot: proportion_subjects_in_common": [[81, "slot-proportion-subjects-in-common"]], "Slot: publication_is_added": [[82, "slot-publication-is-added"]], "Slot: publication_is_deleted": [[83, "slot-publication-is-deleted"]], "Slot: publications": [[84, "slot-publications"]], "Slot: sub_groups": [[85, "slot-sub-groups"]], "Slot: subject": [[86, "slot-subject"], [199, "slot-subject"], [968, "slot-subject"], [1089, "slot-subject"]], "Slot: subject_closure": [[87, "slot-subject-closure"]], "Slot: subject_closure_label": [[88, "slot-subject-closure-label"]], "Slot: subject_label": [[89, "slot-subject-label"], [808, "slot-subject-label"], [1022, "slot-subject-label"]], "Slot: subjects_in_common": [[90, "slot-subjects-in-common"]], "Slot: summary_group": [[91, "slot-summary-group"]], "Slot: supporting_objects": [[92, "slot-supporting-objects"]], "Class: ClassEnrichmentConfiguration": [[94, "class-classenrichmentconfiguration"]], "Class: ClassEnrichmentResult": [[95, "class-classenrichmentresult"]], "Class: ClassEnrichmentResultSet": [[96, "class-classenrichmentresultset"]], "Type: Position": [[110, "type-position"], [988, "type-position"]], "Enum: SortFieldEnum": [[111, "enum-sortfieldenum"]], "Permissible Values": [[111, "permissible-values"], [142, "permissible-values"], [150, "permissible-values"], [216, "permissible-values"], [275, "permissible-values"], [328, "permissible-values"], [400, "permissible-values"], [404, "permissible-values"], [407, "permissible-values"], [409, "permissible-values"], [410, "permissible-values"], [498, "permissible-values"], [679, "permissible-values"], [688, "permissible-values"], [697, "permissible-values"], [701, "permissible-values"], [925, "permissible-values"], [996, "permissible-values"], [1054, "permissible-values"], [1064, "permissible-values"]], "Slot: ancestor_of_more_informative_result": [[117, "slot-ancestor-of-more-informative-result"]], "Slot: background_count": [[118, "slot-background-count"]], "Slot: background_total": [[119, "slot-background-total"]], "class-enrichment": [[120, "class-enrichment"]], "Slot: class_id": [[121, "slot-class-id"]], "Slot: class_label": [[122, "slot-class-label"]], "Slot: descendant_of_more_informative_result": [[123, "slot-descendant-of-more-informative-result"]], "Slot: direction": [[124, "slot-direction"]], "Slot: false_discovery_rate": [[125, "slot-false-discovery-rate"]], "Slot: fold_enrichment": [[126, "slot-fold-enrichment"]], "Class Enrichment Datamodel": [[127, "class-enrichment-datamodel"]], "Slot: p_value": [[128, "slot-p-value"]], "Slot: p_value_adjusted": [[129, "slot-p-value-adjusted"]], "Slot: p_value_cutoff": [[130, "slot-p-value-cutoff"]], "Slot: probability": [[131, "slot-probability"]], "Slot: rank": [[132, "slot-rank"], [735, "slot-rank"]], "Slot: results": [[133, "slot-results"], [185, "slot-results"], [737, "slot-results"], [1085, "slot-results"]], "Slot: sample_count": [[134, "slot-sample-count"]], "Slot: sample_total": [[135, "slot-sample-total"]], "Enum: DiffCategory": [[142, "enum-diffcategory"]], "Type: EntityReference": [[144, "type-entityreference"]], "Type: Label": [[149, "type-label"]], "Enum: MappingCardinalityEnum": [[150, "enum-mappingcardinalityenum"]], "Position": [[154, "position"]], "Class: RelationalDiff": [[155, "class-relationaldiff"]], "Type: Source": [[156, "type-source"]], "Class: StructureDiffResultSet": [[159, "class-structurediffresultset"]], "Slot: category": [[163, "slot-category"], [560, "slot-category"], [1065, "slot-category"]], "cross-ontology-diff": [[164, "cross-ontology-diff"]], "Cross-Ontology Diff": [[165, "cross-ontology-diff"]], "Slot: is_functional": [[166, "slot-is-functional"]], "Slot: label": [[167, "slot-label"], [442, "slot-label"], [628, "slot-label"], [787, "slot-label"], [888, "slot-label"], [957, "slot-label"]], "Slot: left_object_id": [[168, "slot-left-object-id"]], "Slot: left_object_is_functional": [[169, "slot-left-object-is-functional"]], "Slot: left_object_label": [[170, "slot-left-object-label"]], "Slot: left_object_name": [[171, "slot-left-object-name"]], "Slot: left_predicate_id": [[172, "slot-left-predicate-id"]], "Slot: left_predicate_label": [[173, "slot-left-predicate-label"]], "Slot: left_predicate_name": [[174, "slot-left-predicate-name"]], "Slot: left_side": [[175, "slot-left-side"]], "Slot: left_source": [[176, "slot-left-source"]], "Slot: left_subject_id": [[177, "slot-left-subject-id"]], "Slot: left_subject_is_functional": [[178, "slot-left-subject-is-functional"]], "Slot: left_subject_label": [[179, "slot-left-subject-label"]], "Slot: left_subject_name": [[180, "slot-left-subject-name"]], "Slot: object_mapping_cardinality": [[182, "slot-object-mapping-cardinality"]], "Slot: object_mapping_predicate": [[183, "slot-object-mapping-predicate"]], "Slot: right_intermediate_ids": [[186, "slot-right-intermediate-ids"]], "Slot: right_object_id": [[187, "slot-right-object-id"]], "Slot: right_object_label": [[188, "slot-right-object-label"]], "Slot: right_object_name": [[189, "slot-right-object-name"]], "Slot: right_predicate_ids": [[190, "slot-right-predicate-ids"]], "Slot: right_predicate_labels": [[191, "slot-right-predicate-labels"]], "Slot: right_predicate_names": [[192, "slot-right-predicate-names"]], "Slot: right_side": [[193, "slot-right-side"]], "Slot: right_source": [[194, "slot-right-source"]], "Slot: right_subject_id": [[195, "slot-right-subject-id"]], "Slot: right_subject_label": [[196, "slot-right-subject-label"]], "Slot: right_subject_name": [[197, "slot-right-subject-name"]], "Slot: side": [[198, "slot-side"]], "Slot: subject_mapping_cardinality": [[200, "slot-subject-mapping-cardinality"]], "Slot: subject_mapping_predicate": [[201, "slot-subject-mapping-predicate"]], "types": [[202, "types"], [295, "types"], [373, "types"], [472, "types"], [672, "types"], [744, "types"], [813, "types"], [917, "types"], [1029, "types"], [1098, "types"]], "FunOwl": [[203, "funowl"]], "Datamodels": [[204, "datamodels"], [1180, "datamodels"]], "Contents:": [[204, null], [1106, null], [1114, null], [1123, null], [1130, null], [1131, null], [1146, null], [1155, null], [1168, null], [1174, null]], "Class: ItemList": [[214, "class-itemlist"]], "Aliases": [[214, "aliases"], [215, "aliases"], [384, "aliases"], [389, "aliases"], [396, "aliases"], [397, "aliases"], [408, "aliases"], [436, "aliases"], [444, "aliases"], [446, "aliases"], [450, "aliases"], [463, "aliases"], [465, "aliases"], [475, "aliases"], [476, "aliases"], [491, "aliases"], [525, "aliases"], [544, "aliases"], [581, "aliases"], [784, "aliases"]], "Class: ItemListCollection": [[215, "class-itemlistcollection"]], "Enum: ItemListOrderType": [[216, "enum-itemlistordertype"]], "Class: ListItem": [[219, "class-listitem"]], "Class: Thing": [[225, "class-thing"], [545, "class-thing"]], "Slot: additionalType": [[229, "slot-additionaltype"]], "Slot: categories": [[230, "slot-categories"], [710, "slot-categories"], [1000, "slot-categories"]], "Slot: description": [[231, "slot-description"], [331, "slot-description"], [874, "slot-description"], [953, "slot-description"]], "Slot: elementId": [[232, "slot-elementid"]], "Slot: id": [[233, "slot-id"], [439, "slot-id"], [611, "slot-id"], [782, "slot-id"], [884, "slot-id"], [955, "slot-id"], [1002, "slot-id"], [1069, "slot-id"]], "Slot: idType": [[234, "slot-idtype"]], "Slot: identifiers": [[235, "slot-identifiers"]], "Item List Data Model": [[236, "item-list-data-model"]], "Slot: item": [[237, "slot-item"]], "itemList": [[238, "itemlist"]], "Slot: itemListElements": [[239, "slot-itemlistelements"]], "Slot: itemLists": [[240, "slot-itemlists"]], "Slot: itemMetadataMap": [[241, "slot-itemmetadatamap"]], "Slot: keywords": [[242, "slot-keywords"]], "Slot: name": [[243, "slot-name"], [284, "slot-name"], [345, "slot-name"]], "Slot: numberOfItems": [[244, "slot-numberofitems"]], "Slot: position": [[245, "slot-position"]], "Slot: previousItem": [[246, "slot-previousitem"]], "Slot: type": [[247, "slot-type"], [294, "slot-type"], [372, "slot-type"], [471, "slot-type"], [671, "slot-type"], [1096, "slot-type"]], "Slot: url": [[248, "slot-url"], [674, "slot-url"], [1099, "slot-url"]], "Slot: wasGeneratedBy": [[249, "slot-wasgeneratedby"]], "KGCL": [[250, "kgcl"]], "Class: Activity": [[251, "class-activity"], [296, "class-activity"]], "Class: Any": [[252, "class-any"], [297, "class-any"], [487, "class-any"]], "Class: LexicalGrouping": [[264, "class-lexicalgrouping"], [309, "class-lexicalgrouping"]], "Class: LexicalIndex": [[265, "class-lexicalindex"], [310, "class-lexicalindex"]], "Class: LexicalTransformation": [[266, "class-lexicaltransformation"], [311, "class-lexicaltransformation"]], "Class: LexicalTransformationPipeline": [[267, "class-lexicaltransformationpipeline"], [312, "class-lexicaltransformationpipeline"]], "Class: RelationshipToTerm": [[271, "class-relationshiptoterm"], [321, "class-relationshiptoterm"]], "Enum: TransformationType": [[275, "enum-transformationtype"], [328, "enum-transformationtype"], [996, "enum-transformationtype"]], "Slot: element": [[278, "slot-element"], [332, "slot-element"]], "Slot: element_term": [[279, "slot-element-term"], [333, "slot-element-term"]], "Slot: groupings": [[280, "slot-groupings"], [334, "slot-groupings"]], "Lexical Index": [[281, "lexical-index"]], "lexical-index": [[282, "lexical-index"], [337, "lexical-index"]], "lexican-index": [[283, "lexican-index"], [338, "lexican-index"]], "Slot: params": [[285, "slot-params"], [350, "slot-params"]], "Slot: pipeline": [[286, "slot-pipeline"], [351, "slot-pipeline"]], "Slot: pipelines": [[287, "slot-pipelines"], [352, "slot-pipelines"]], "Slot: relationships": [[289, "slot-relationships"], [360, "slot-relationships"]], "Slot: source": [[290, "slot-source"], [363, "slot-source"], [663, "slot-source"], [1088, "slot-source"]], "Slot: synonymized": [[291, "slot-synonymized"], [366, "slot-synonymized"]], "Slot: term": [[292, "slot-term"], [368, "slot-term"]], "Slot: transformations": [[293, "slot-transformations"], [370, "slot-transformations"]], "Class: MappingRule": [[313, "class-mappingrule"]], "Class: MappingRuleCollection": [[314, "class-mappingrulecollection"]], "Class: Postcondition": [[318, "class-postcondition"]], "Class: Precondition": [[319, "class-precondition"]], "Type: RegularExpressionString": [[320, "type-regularexpressionstring"]], "Class: RuleSet": [[322, "class-ruleset"]], "Class: Synonymizer": [[325, "class-synonymizer"]], "Class: Test": [[326, "class-test"]], "Mapping Rules Datamodel": [[335, "mapping-rules-datamodel"]], "Slot: input": [[336, "slot-input"]], "mapping-rules": [[339, "mapping-rules"]], "mapping-rules-datamodel": [[340, "mapping-rules-datamodel"]], "Slot: mapping_source_one_of": [[341, "slot-mapping-source-one-of"]], "Slot: match": [[342, "slot-match"], [632, "slot-match"]], "Slot: match_scope": [[343, "slot-match-scope"]], "Slot: minimum_confidence": [[344, "slot-minimum-confidence"]], "Slot: object_match_field_one_of": [[346, "slot-object-match-field-one-of"]], "Slot: object_source_one_of": [[347, "slot-object-source-one-of"]], "Slot: oneway": [[348, "slot-oneway"]], "Slot: output": [[349, "slot-output"]], "Slot: postconditions": [[353, "slot-postconditions"]], "Slot: preconditions": [[354, "slot-preconditions"]], "Slot: predicate_id": [[356, "slot-predicate-id"], [1018, "slot-predicate-id"], [1081, "slot-predicate-id"]], "Slot: predicate_id_one_of": [[357, "slot-predicate-id-one-of"]], "Slot: prefix": [[358, "slot-prefix"], [455, "slot-prefix"], [905, "slot-prefix"]], "Slot: qualifier": [[359, "slot-qualifier"]], "Slot: replacement": [[361, "slot-replacement"]], "Slot: rules": [[362, "slot-rules"]], "Slot: subject_match_field_one_of": [[364, "slot-subject-match-field-one-of"]], "Slot: subject_source_one_of": [[365, "slot-subject-source-one-of"]], "Slot: synonymizer": [[367, "slot-synonymizer"]], "Slot: tests": [[369, "slot-tests"]], "Slot: transformations_included_in": [[371, "slot-transformations-included-in"]], "Slot: weight": [[374, "slot-weight"]], "See Also": [[374, "see-also"], [403, "see-also"], [416, "see-also"], [421, "see-also"], [437, "see-also"], [439, "see-also"], [463, "see-also"], [480, "see-also"], [481, "see-also"], [498, "see-also"], [599, "see-also"], [1166, "see-also"]], "Class: Axiom": [[375, "class-axiom"], [488, "class-axiom"]], "Class: BasicPropertyValue": [[376, "class-basicpropertyvalue"]], "Class: DefinitionPropertyValue": [[383, "class-definitionpropertyvalue"]], "Class: DisjointClassExpressionsAxiom": [[384, "class-disjointclassexpressionsaxiom"]], "Class: DomainRangeAxiom": [[385, "class-domainrangeaxiom"]], "Class: Edge": [[387, "class-edge"]], "Class: EquivalentNodesSet": [[388, "class-equivalentnodesset"]], "Class: ExistentialRestrictionExpression": [[389, "class-existentialrestrictionexpression"]], "Annotations": [[389, "annotations"], [396, "annotations"], [850, "annotations"], [852, "annotations"], [858, "annotations"], [859, "annotations"], [860, "annotations"], [863, "annotations"], [864, "annotations"], [865, "annotations"], [871, "annotations"], [872, "annotations"], [873, "annotations"], [876, "annotations"], [877, "annotations"], [879, "annotations"], [886, "annotations"], [889, "annotations"], [890, "annotations"], [891, "annotations"], [892, "annotations"], [893, "annotations"], [895, "annotations"], [896, "annotations"], [897, "annotations"], [899, "annotations"], [901, "annotations"], [902, "annotations"], [907, "annotations"], [914, "annotations"], [915, "annotations"], [918, "annotations"]], "Class: Graph": [[391, "class-graph"]], "Class: GraphDocument": [[392, "class-graphdocument"]], "Class: LogicalDefinitionAxiom": [[396, "class-logicaldefinitionaxiom"]], "Class: Meta": [[397, "class-meta"]], "Class: Node": [[399, "class-node"], [1046, "class-node"]], "Enum: NodeTypeEnum": [[400, "enum-nodetypeenum"]], "Type: OboIdentifierString": [[403, "type-oboidentifierstring"]], "PredsEnum": [[404, "predsenum"]], "Class: PrefixDeclaration": [[405, "class-prefixdeclaration"]], "Class: PropertyChainAxiom": [[406, "class-propertychainaxiom"]], "Enum: PropertyTypeEnum": [[407, "enum-propertytypeenum"]], "Enum: ScopeEnum": [[409, "enum-scopeenum"]], "ScopesEnum": [[410, "scopesenum"]], "Class: SubsetDefinition": [[413, "class-subsetdefinition"]], "Class: SynonymPropertyValue": [[414, "class-synonympropertyvalue"]], "Class: SynonymTypeDefinition": [[415, "class-synonymtypedefinition"]], "Type: SynonymTypeIdentifierString": [[416, "type-synonymtypeidentifierstring"]], "Class: XrefPropertyValue": [[420, "class-xrefpropertyvalue"]], "Type: XrefString": [[421, "type-xrefstring"]], "Slot: allValuesFromEdges": [[422, "slot-allvaluesfromedges"]], "Slot: basicPropertyValues": [[423, "slot-basicpropertyvalues"]], "Slot: chainPredicateIds": [[424, "slot-chainpredicateids"]], "Slot: classExpressions": [[425, "slot-classexpressions"]], "Slot: classIds": [[426, "slot-classids"]], "Slot: definedClassId": [[428, "slot-definedclassid"]], "Slot: definition": [[429, "slot-definition"], [578, "slot-definition"]], "Slot: deprecated": [[430, "slot-deprecated"], [581, "slot-deprecated"]], "Slot: disjointClassExpressionsAxioms": [[431, "slot-disjointclassexpressionsaxioms"]], "Slot: domainClassIds": [[432, "slot-domainclassids"]], "Slot: domainRangeAxioms": [[433, "slot-domainrangeaxioms"]], "Slot: edges": [[434, "slot-edges"]], "Slot: equivalentNodesSets": [[435, "slot-equivalentnodessets"]], "Slot: fillerId": [[436, "slot-fillerid"]], "Slot: genusIds": [[437, "slot-genusids"]], "Slot: graphs": [[438, "slot-graphs"]], "Obographs Datamodel": [[440, "obographs-datamodel"]], "Slot: isExact": [[441, "slot-isexact"]], "Slot: lang": [[443, "slot-lang"]], "Slot: lbl": [[444, "slot-lbl"]], "Slot: logicalDefinitionAxioms": [[445, "slot-logicaldefinitionaxioms"]], "Slot: meta": [[446, "slot-meta"]], "Slot: namespace": [[447, "slot-namespace"]], "Slot: nodeIds": [[448, "slot-nodeids"]], "Slot: nodes": [[449, "slot-nodes"]], "Slot: obj": [[450, "slot-obj"]], "obographs_datamodel": [[451, "obographs-datamodel"]], "obographs_linkml_model": [[452, "obographs-linkml-model"]], "Slot: pred": [[453, "slot-pred"]], "Slot: predicateId": [[454, "slot-predicateid"]], "Slot: prefixes": [[456, "slot-prefixes"]], "Slot: propertyChainAxioms": [[457, "slot-propertychainaxioms"]], "Slot: propertyId": [[458, "slot-propertyid"]], "Slot: propertyType": [[459, "slot-propertytype"]], "Slot: rangeClassIds": [[460, "slot-rangeclassids"]], "Slot: representativeNodeId": [[461, "slot-representativenodeid"]], "Slot: representitiveNodeId": [[462, "slot-representitivenodeid"]], "Slot: restrictions": [[463, "slot-restrictions"]], "Slot: scope": [[464, "slot-scope"]], "Slot: sub": [[465, "slot-sub"]], "Slot: subsetDefinitions": [[466, "slot-subsetdefinitions"]], "Slot: subsets": [[467, "slot-subsets"]], "Slot: synonymType": [[468, "slot-synonymtype"]], "Slot: synonymTypeDefinitions": [[469, "slot-synonymtypedefinitions"]], "Slot: synonyms": [[470, "slot-synonyms"]], "Slot: unionEquivalentTo": [[473, "slot-unionequivalentto"]], "Slot: unionEquivalentToExpression": [[474, "slot-unionequivalenttoexpression"]], "Slot: val": [[475, "slot-val"]], "Slot: valType": [[476, "slot-valtype"]], "Slot: version": [[477, "slot-version"], [920, "slot-version"]], "Slot: xrefs": [[478, "slot-xrefs"]], "Class: Agent": [[479, "class-agent"], [816, "class-agent"]], "Valid ID Prefixes": [[479, "valid-id-prefixes"], [512, "valid-id-prefixes"], [939, "valid-id-prefixes"], [943, "valid-id-prefixes"]], "Subset: AllotropePermittedProfile": [[480, "subset-allotropepermittedprofile"]], "Slots in subset": [[480, "slots-in-subset"], [481, "slots-in-subset"], [502, "slots-in-subset"], [504, "slots-in-subset"], [531, "slots-in-subset"], [532, "slots-in-subset"]], "Subset: AllotropeRequiredProfile": [[481, "subset-allotroperequiredprofile"]], "Class: Annotation": [[482, "class-annotation"]], "Class: AnnotationProperty": [[483, "class-annotationproperty"]], "Class: AnnotationPropertyMixin": [[484, "class-annotationpropertymixin"]], "Class: Anonymous": [[485, "class-anonymous"]], "Class: AnonymousClassExpression": [[486, "class-anonymousclassexpression"]], "Type: CURIELiteral": [[490, "type-curieliteral"]], "Class: Class": [[491, "class-class"]], "Class: ClassExpression": [[492, "class-classexpression"]], "Enum: DefinitionConstraintComponent": [[498, "enum-definitionconstraintcomponent"]], "Class: Expression": [[500, "class-expression"]], "Subset: GoPermittedProfile": [[502, "subset-gopermittedprofile"]], "Subset: GoRecommendedProfile": [[503, "subset-gorecommendedprofile"]], "Subset: GoRequiredProfile": [[504, "subset-gorequiredprofile"]], "Class: HasCategory": [[505, "class-hascategory"]], "Class: HasLifeCycle": [[506, "class-haslifecycle"]], "Class: HasMappings": [[507, "class-hasmappings"]], "Class: HasMinimalMetadata": [[508, "class-hasminimalmetadata"]], "Class: HasProvenance": [[509, "class-hasprovenance"]], "Class: HasSynonyms": [[510, "class-hassynonyms"]], "Class: HasUserInformation": [[511, "class-hasuserinformation"]], "Class: HomoSapiens": [[512, "class-homosapiens"]], "Slot: IEDB_alternative_term": [[513, "slot-iedb-alternative-term"]], "Slot: ISA_alternative_term": [[514, "slot-isa-alternative-term"]], "Class: Image": [[515, "class-image"]], "Type: IriType": [[517, "type-iritype"]], "Type: LabelType": [[520, "type-labeltype"]], "Slot: NCIT_definition_source": [[521, "slot-ncit-definition-source"]], "Slot: NCIT_term_source": [[522, "slot-ncit-term-source"]], "Slot: NCIT_term_type": [[523, "slot-ncit-term-type"]], "Class: NamedIndividual": [[524, "class-namedindividual"]], "Class: NamedObject": [[525, "class-namedobject"]], "Type: NarrativeText": [[526, "type-narrativetext"]], "Class: NotObsoleteAspect": [[529, "class-notobsoleteaspect"]], "Slot: OBO_foundry_unique_label": [[530, "slot-obo-foundry-unique-label"]], "TODOs": [[530, "todos"], [552, "todos"], [555, "todos"], [556, "todos"], [564, "todos"], [571, "todos"], [579, "todos"], [583, "todos"], [585, "todos"], [588, "todos"], [598, "todos"], [606, "todos"], [618, "todos"], [619, "todos"], [652, "todos"], [655, "todos"], [657, "todos"], [658, "todos"], [662, "todos"], [669, "todos"], [696, "todos"], [774, "todos"], [960, "todos"], [1050, "todos"], [1062, "todos"]], "Subset: ObiPermittedProfile": [[531, "subset-obipermittedprofile"]], "Subset: ObiRequiredProfile": [[532, "subset-obirequiredprofile"]], "Class: ObjectProperty": [[533, "class-objectproperty"]], "Class: ObsoleteAspect": [[535, "class-obsoleteaspect"]], "Class: Ontology": [[536, "class-ontology"], [838, "class-ontology"]], "Ontology-Metadata": [[537, "ontology-metadata"]], "Class: Property": [[538, "class-property"]], "Class: PropertyExpression": [[539, "class-propertyexpression"]], "Class: Restriction": [[540, "class-restriction"]], "Class: Subset": [[543, "class-subset"]], "Class: Term": [[544, "class-term"], [945, "class-term"]], "Type: TidyString": [[546, "type-tidystring"]], "Class: TransitiveProperty": [[548, "class-transitiveproperty"]], "Type: URLLiteral": [[549, "type-urlliteral"]], "Slot: allValuesFrom": [[552, "slot-allvaluesfrom"]], "Slot: alternative_term": [[553, "slot-alternative-term"]], "Slot: annotatedProperty": [[554, "slot-annotatedproperty"]], "Slot: annotatedSource": [[555, "slot-annotatedsource"]], "Slot: annotatedTarget": [[556, "slot-annotatedtarget"]], "Slot: annotations": [[557, "slot-annotations"], [999, "slot-annotations"]], "Slot: broadMatch": [[558, "slot-broadmatch"]], "Slot: cardinality": [[559, "slot-cardinality"]], "Slot: changeNote": [[561, "slot-changenote"]], "Slot: closeMatch": [[562, "slot-closematch"]], "Slot: comment": [[563, "slot-comment"]], "Slot: complementOf": [[564, "slot-complementof"]], "Slot: conformsTo": [[565, "slot-conformsto"]], "Slot: consider": [[566, "slot-consider"]], "Slot: contributor": [[567, "slot-contributor"]], "Slot: core_property": [[568, "slot-core-property"]], "Slot: created": [[569, "slot-created"]], "Slot: created_by": [[570, "slot-created-by"]], "Slot: creator": [[572, "slot-creator"]], "Slot: curator_note": [[573, "slot-curator-note"]], "Slot: database_cross_reference": [[574, "slot-database-cross-reference"]], "Slot: date_retrieved": [[576, "slot-date-retrieved"]], "Slot: defaultLanguage": [[577, "slot-defaultlanguage"]], "Slot: definition_source": [[579, "slot-definition-source"]], "Slot: depicted_by": [[580, "slot-depicted-by"]], "Slot: disconnected_from": [[582, "slot-disconnected-from"]], "Slot: disjointWith": [[583, "slot-disjointwith"]], "Slot: distinctMembers": [[584, "slot-distinctmembers"]], "Slot: domain": [[585, "slot-domain"]], "Slot: editor_note": [[586, "slot-editor-note"]], "Slot: editor_preferred_term": [[587, "slot-editor-preferred-term"]], "Slot: equivalentClass": [[588, "slot-equivalentclass"]], "Slot: equivalentProperty": [[589, "slot-equivalentproperty"]], "Slot: evidence": [[590, "slot-evidence"]], "Slot: exactMatch": [[591, "slot-exactmatch"]], "Slot: example_of_usage": [[592, "slot-example-of-usage"]], "Slot: excluded_axiom": [[593, "slot-excluded-axiom"]], "Slot: excluded_from_QC_check": [[594, "slot-excluded-from-qc-check"]], "Slot: excluded_subClassOf": [[595, "slot-excluded-subclassof"]], "Slot: excluded_synonym": [[596, "slot-excluded-synonym"]], "Slot: external_ontology": [[597, "slot-external-ontology"]], "Slot: hasValue": [[598, "slot-hasvalue"]], "Slot: has_alternative_id": [[599, "slot-has-alternative-id"]], "Slot: has_axiom_label": [[600, "slot-has-axiom-label"]], "Slot: has_broad_synonym": [[601, "slot-has-broad-synonym"]], "Slot: has_curation_status": [[602, "slot-has-curation-status"]], "Slot: has_exact_synonym": [[603, "slot-has-exact-synonym"]], "Slot: has_narrow_synonym": [[604, "slot-has-narrow-synonym"]], "Slot: has_obo_namespace": [[605, "slot-has-obo-namespace"]], "Slot: has_obsolescence_reason": [[606, "slot-has-obsolescence-reason"]], "Slot: has_ontology_root_term": [[607, "slot-has-ontology-root-term"]], "Slot: has_rank": [[608, "slot-has-rank"]], "Slot: has_related_synonym": [[609, "slot-has-related-synonym"]], "Slot: has_synonym_type": [[610, "slot-has-synonym-type"]], "Slot: image": [[612, "slot-image"]], "Slot: imported_from": [[613, "slot-imported-from"]], "Slot: imports": [[614, "slot-imports"]], "Slot: in_subset": [[615, "slot-in-subset"]], "Ontology Metadata Ontology Schema": [[616, "ontology-metadata-ontology-schema"]], "Slot: informative_property": [[617, "slot-informative-property"]], "Slot: intersectionOf": [[618, "slot-intersectionof"]], "Slot: inverseOf": [[619, "slot-inverseof"]], "Slot: isDefinedBy": [[620, "slot-isdefinedby"]], "Slot: is_a_defining_property_chain_axiom": [[621, "slot-is-a-defining-property-chain-axiom"]], "Slot: is_a_defining_property_chain_axiom_where_second_argument_is_reflexive": [[622, "slot-is-a-defining-property-chain-axiom-where-second-argument-is-reflexive"]], "Slot: is_class_level": [[623, "slot-is-class-level"]], "Slot: is_cyclic": [[624, "slot-is-cyclic"]], "Slot: is_inferred": [[625, "slot-is-inferred"]], "Slot: is_metadata_tag": [[626, "slot-is-metadata-tag"]], "Slot: is_transitive": [[627, "slot-is-transitive"]], "Slot: language": [[629, "slot-language"]], "Slot: license": [[630, "slot-license"]], "Slot: logical_predicate": [[631, "slot-logical-predicate"]], "Slot: match_aspect": [[633, "slot-match-aspect"]], "Slot: maxQualifiedCardinality": [[634, "slot-maxqualifiedcardinality"]], "Slot: members": [[635, "slot-members"]], "Slot: minCardinality": [[636, "slot-mincardinality"]], "Slot: minQualifiedCardinality": [[637, "slot-minqualifiedcardinality"]], "Slot: narrowMatch": [[638, "slot-narrowmatch"]], "Slot: never_in_taxon": [[639, "slot-never-in-taxon"]], "Slot: notes": [[640, "slot-notes"]], "Slot: oboInOwl_id": [[642, "slot-oboinowl-id"]], "Slot: oboInOwl_ontology": [[643, "slot-oboinowl-ontology"]], "Slot: obsoletion_related_property": [[644, "slot-obsoletion-related-property"]], "omo-schema": [[645, "omo-schema"]], "Slot: onClass": [[646, "slot-onclass"]], "Slot: onProperty": [[647, "slot-onproperty"]], "Slot: oneOf": [[648, "slot-oneof"]], "Slot: ontology_term_requester": [[649, "slot-ontology-term-requester"]], "Slot: page": [[650, "slot-page"]], "Slot: propertyChainAxiom": [[652, "slot-propertychainaxiom"]], "Slot: provenance_property": [[653, "slot-provenance-property"]], "Slot: qualifiedCardinality": [[654, "slot-qualifiedcardinality"]], "Slot: range": [[655, "slot-range"]], "Slot: reification_predicate": [[656, "slot-reification-predicate"]], "Slot: sameAs": [[657, "slot-sameas"]], "Slot: seeAlso": [[658, "slot-seealso"]], "Slot: shortcut_annotation_property": [[659, "slot-shortcut-annotation-property"]], "Slot: shorthand": [[660, "slot-shorthand"]], "Slot: should_conform_to": [[661, "slot-should-conform-to"]], "Slot: someValuesFrom": [[662, "slot-somevaluesfrom"]], "Slot: subClassOf": [[664, "slot-subclassof"]], "Slot: synonym": [[665, "slot-synonym"]], "Slot: temporal_interpretation": [[666, "slot-temporal-interpretation"]], "Slot: term_editor": [[667, "slot-term-editor"]], "Slot: term_replaced_by": [[668, "slot-term-replaced-by"]], "Slot: term_tracker_item": [[669, "slot-term-tracker-item"]], "Slot: title": [[670, "slot-title"], [916, "slot-title"]], "Slot: unionOf": [[673, "slot-unionof"]], "Slot: versionIRI": [[675, "slot-versioniri"]], "Slot: versionInfo": [[676, "slot-versioninfo"]], "Slot: version_property": [[677, "slot-version-property"]], "Enum: BooleanOperator": [[679, "enum-booleanoperator"]], "Class: ComplexQuery": [[680, "class-complexquery"]], "Enum: GraphFunction": [[688, "enum-graphfunction"]], "Class: PathExpression": [[695, "class-pathexpression"]], "Class: SearchBaseConfiguration": [[696, "class-searchbaseconfiguration"]], "Enum: SearchProperty": [[697, "enum-searchproperty"]], "Class: SearchResult": [[698, "class-searchresult"]], "Class: SearchResultSet": [[699, "class-searchresultset"]], "Type: SearchTerm": [[700, "type-searchterm"]], "Enum: SearchTermSyntax": [[701, "enum-searchtermsyntax"]], "Slot: all_of": [[707, "slot-all-of"]], "Slot: any_of": [[708, "slot-any-of"]], "Slot: atom": [[709, "slot-atom"]], "Slot: configuration": [[711, "slot-configuration"]], "Slot: cursor": [[712, "slot-cursor"]], "Slot: force_case_insensitive": [[713, "slot-force-case-insensitive"]], "Slot: graph_predicates": [[714, "slot-graph-predicates"]], "Slot: include_aliases": [[715, "slot-include-aliases"], [1003, "slot-include-aliases"]], "Slot: include_definition": [[716, "slot-include-definition"]], "Slot: include_id": [[717, "slot-include-id"]], "Slot: include_label": [[718, "slot-include-label"]], "Slot: include_obsoletes_in_results": [[719, "slot-include-obsoletes-in-results"]], "search datamodel": [[720, "search-datamodel"]], "Slot: is_complete": [[721, "slot-is-complete"]], "Slot: is_fuzzy": [[722, "slot-is-fuzzy"]], "Slot: is_partial": [[723, "slot-is-partial"]], "Slot: is_regular_expression": [[724, "slot-is-regular-expression"]], "Slot: limit": [[725, "slot-limit"], [1007, "slot-limit"]], "Slot: matches_full_search_term": [[726, "slot-matches-full-search-term"]], "Slot: none_of": [[727, "slot-none-of"]], "Slot: object_id": [[728, "slot-object-id"], [796, "slot-object-id"], [1014, "slot-object-id"], [1077, "slot-object-id"]], "Slot: object_match_field": [[730, "slot-object-match-field"]], "Slot: object_source": [[731, "slot-object-source"], [799, "slot-object-source"], [1016, "slot-object-source"]], "Slot: object_source_version": [[732, "slot-object-source-version"]], "Slot: path_to": [[733, "slot-path-to"]], "Slot: properties": [[734, "slot-properties"]], "Slot: result_count": [[736, "slot-result-count"]], "search-datamodel": [[738, "search-datamodel"]], "Slot: search_term": [[739, "slot-search-term"]], "Slot: search_terms": [[740, "slot-search-terms"]], "Slot: snippet": [[741, "slot-snippet"]], "Slot: syntax": [[742, "slot-syntax"]], "Slot: traversal": [[743, "slot-traversal"]], "SemSQL": [[745, "semsql"]], "Class: BestMatch": [[746, "class-bestmatch"]], "Type: ItemCount": [[756, "type-itemcount"]], "Type: NegativeLogValue": [[760, "type-negativelogvalue"]], "Type: NonNegativeFloat": [[762, "type-nonnegativefloat"]], "Class: PairwiseSimilarity": [[764, "class-pairwisesimilarity"]], "Class: TermInfo": [[767, "class-terminfo"]], "Class: TermPairwiseSimilarity": [[768, "class-termpairwisesimilarity"]], "Class: TermSetPairwiseSimilarity": [[769, "class-termsetpairwisesimilarity"]], "Type: ZeroToOne": [[773, "type-zerotoone"]], "Slot: ancestor_id": [[774, "slot-ancestor-id"]], "Slot: ancestor_information_content": [[775, "slot-ancestor-information-content"]], "Slot: ancestor_label": [[776, "slot-ancestor-label"]], "Slot: ancestor_source": [[777, "slot-ancestor-source"]], "Slot: average_score": [[778, "slot-average-score"]], "Slot: best_score": [[779, "slot-best-score"]], "Slot: cosine_similarity": [[780, "slot-cosine-similarity"]], "Slot: dice_similarity": [[781, "slot-dice-similarity"]], "Semantic Similarity": [[783, "semantic-similarity"]], "Slot: information_content": [[784, "slot-information-content"]], "Slot: intersection_count": [[785, "slot-intersection-count"]], "Slot: jaccard_similarity": [[786, "slot-jaccard-similarity"]], "Slot: match_source": [[788, "slot-match-source"]], "Slot: match_source_label": [[789, "slot-match-source-label"]], "Slot: match_subsumer": [[790, "slot-match-subsumer"]], "Slot: match_subsumer_label": [[791, "slot-match-subsumer-label"]], "Slot: match_target": [[792, "slot-match-target"]], "Slot: match_target_label": [[793, "slot-match-target-label"]], "Slot: metric": [[794, "slot-metric"]], "Slot: object_best_matches": [[795, "slot-object-best-matches"]], "Slot: object_information_content": [[797, "slot-object-information-content"]], "Slot: object_termset": [[800, "slot-object-termset"]], "Slot: overlap_coefficient": [[801, "slot-overlap-coefficient"]], "Slot: phenodigm_score": [[802, "slot-phenodigm-score"]], "Slot: score": [[803, "slot-score"]], "Slot: similarity": [[804, "slot-similarity"]], "Slot: subject_best_matches": [[805, "slot-subject-best-matches"]], "Slot: subject_id": [[806, "slot-subject-id"], [1090, "slot-subject-id"]], "Slot: subject_information_content": [[807, "slot-subject-information-content"]], "Slot: subject_source": [[809, "slot-subject-source"], [1023, "slot-subject-source"]], "Slot: subject_termset": [[810, "slot-subject-termset"]], "Slot: subsumed_by_score": [[811, "slot-subsumed-by-score"]], "Slot: subsumes_score": [[812, "slot-subsumes-score"]], "Slot: union_count": [[814, "slot-union-count"]], "SSSOM": [[815, "sssom"], [1117, "sssom"]], "Class: ChangeTypeStatistic": [[818, "class-changetypestatistic"]], "Class: ContributorRole": [[819, "class-contributorrole"]], "Class: ContributorStatistics": [[820, "class-contributorstatistics"]], "Class: FacetStatistics": [[827, "class-facetstatistics"]], "LinkML Specification": [[827, "linkml-specification"], [830, "linkml-specification"], [841, "linkml-specification"]], "Class: FacetedCount": [[828, "class-facetedcount"]], "Class: GlobalStatistics": [[830, "class-globalstatistics"]], "Class: GroupedStatistics": [[831, "class-groupedstatistics"]], "Class: SummaryStatisticCollection": [[841, "class-summarystatisticcollection"]], "Class: SummaryStatisticsCalculationActivity": [[842, "class-summarystatisticscalculationactivity"]], "Class: SummaryStatisticsReport": [[843, "class-summarystatisticsreport"]], "Class: UngroupedStatistics": [[845, "class-ungroupedstatistics"]], "Slot: acted_on_behalf_of": [[848, "slot-acted-on-behalf-of"]], "Slot: agents": [[849, "slot-agents"]], "Slot: annotation_property_count": [[850, "slot-annotation-property-count"]], "Slot: anonymous_class_expression_count": [[851, "slot-anonymous-class-expression-count"]], "Slot: anonymous_individual_count": [[852, "slot-anonymous-individual-count"]], "Slot: by_category": [[853, "slot-by-category"]], "Slot: by_ontology": [[854, "slot-by-ontology"]], "Slot: by_subset": [[855, "slot-by-subset"]], "Slot: by_taxon": [[856, "slot-by-taxon"]], "Slot: change_summary": [[857, "slot-change-summary"]], "Slot: class_count": [[858, "slot-class-count"]], "Slot: class_count_by_category": [[859, "slot-class-count-by-category"]], "Slot: class_count_by_subset": [[860, "slot-class-count-by-subset"]], "Slot: class_count_excluding_deprecated": [[861, "slot-class-count-excluding-deprecated"]], "Slot: class_count_with_definitions": [[862, "slot-class-count-with-definitions"]], "Slot: class_count_with_text_definitions": [[863, "slot-class-count-with-text-definitions"]], "Slot: class_count_without_text_definitions": [[864, "slot-class-count-without-text-definitions"]], "Slot: class_statistic_group": [[865, "slot-class-statistic-group"]], "Slot: compared_with": [[866, "slot-compared-with"]], "Slot: contributor_id": [[867, "slot-contributor-id"]], "Slot: contributor_name": [[868, "slot-contributor-name"]], "Slot: contributor_summary": [[869, "slot-contributor-summary"]], "Slot: count_statistic": [[870, "slot-count-statistic"]], "Slot: datatype_property_count": [[871, "slot-datatype-property-count"]], "Slot: deprecated_class_count": [[872, "slot-deprecated-class-count"]], "Slot: deprecated_object_property_count": [[873, "slot-deprecated-object-property-count"]], "Slot: description_logic_profile": [[875, "slot-description-logic-profile"]], "Slot: distinct_synonym_count": [[876, "slot-distinct-synonym-count"]], "Slot: edge_count_by_predicate": [[877, "slot-edge-count-by-predicate"]], "Slot: ended_at_time": [[878, "slot-ended-at-time"]], "Slot: entailed_edge_count_by_predicate": [[879, "slot-entailed-edge-count-by-predicate"]], "Slot: equivalent_classes_axiom_count": [[880, "slot-equivalent-classes-axiom-count"]], "Slot: equivalentclasses_axiom_count": [[881, "slot-equivalentclasses-axiom-count"]], "Slot: facet": [[882, "slot-facet"]], "Slot: filtered_count": [[883, "slot-filtered-count"]], "Summary Statistics Datamodel": [[885, "summary-statistics-datamodel"]], "Slot: individual_count": [[886, "slot-individual-count"]], "Slot: individual_statistic_group": [[887, "slot-individual-statistic-group"]], "Slot: mapping_count": [[889, "slot-mapping-count"]], "Slot: mapping_statement_count_by_object_source": [[890, "slot-mapping-statement-count-by-object-source"]], "Slot: mapping_statement_count_by_predicate": [[891, "slot-mapping-statement-count-by-predicate"]], "Slot: mapping_statement_count_subject_by_object_source": [[892, "slot-mapping-statement-count-subject-by-object-source"]], "Slot: merged_class_count": [[893, "slot-merged-class-count"]], "Slot: metadata_statistic_group": [[894, "slot-metadata-statistic-group"]], "Slot: named_individual_count": [[895, "slot-named-individual-count"]], "Slot: non_deprecated_class_count": [[896, "slot-non-deprecated-class-count"]], "Slot: non_deprecated_object_property_count": [[897, "slot-non-deprecated-object-property-count"]], "Slot: normalization_comments": [[898, "slot-normalization-comments"]], "Slot: object_property_count": [[899, "slot-object-property-count"]], "Slot: ontologies": [[900, "slot-ontologies"]], "Slot: ontology_count": [[901, "slot-ontology-count"]], "Slot: owl_axiom_count": [[902, "slot-owl-axiom-count"]], "Slot: owl_statistic_group": [[903, "slot-owl-statistic-group"]], "Slot: partitions": [[904, "slot-partitions"]], "Slot: property_count": [[906, "slot-property-count"]], "Slot: property_statistic_group": [[907, "slot-property-statistic-group"]], "Slot: rdf_triple_count": [[908, "slot-rdf-triple-count"]], "Slot: role_counts": [[909, "slot-role-counts"]], "Slot: started_at_time": [[910, "slot-started-at-time"]], "Slot: subclass_of_axiom_count": [[911, "slot-subclass-of-axiom-count"]], "Slot: subset_count": [[912, "slot-subset-count"]], "summary-statistics": [[913, "summary-statistics"]], "Slot: synonym_statement_count": [[914, "slot-synonym-statement-count"]], "Slot: synonym_statement_count_by_predicate": [[915, "slot-synonym-statement-count-by-predicate"]], "Slot: unsatisfiable_class_count": [[918, "slot-unsatisfiable-class-count"]], "Slot: untyped_entity_count": [[919, "slot-untyped-entity-count"]], "Slot: version_info": [[921, "slot-version-info"]], "Slot: was_associated_with": [[922, "slot-was-associated-with"]], "Slot: was_generated_by": [[923, "slot-was-generated-by"]], "Enum: ConfigurationOption": [[925, "enum-configurationoption"]], "Class: PredicateTerm": [[939, "class-predicateterm"]], "Class: SubjectTerm": [[942, "class-subjectterm"]], "Class: Taxon": [[943, "class-taxon"]], "Class: TaxonConstraint": [[944, "class-taxonconstraint"]], "Slot: asserted": [[949, "slot-asserted"]], "Slot: candidate": [[950, "slot-candidate"]], "Slot: contradicted_by": [[952, "slot-contradicted-by"]], "Slot: evolutionary": [[954, "slot-evolutionary"]], "Taxon Constraints Reporting Datamodel": [[956, "taxon-constraints-reporting-datamodel"]], "Slot: never_in": [[958, "slot-never-in"]], "Slot: only_in": [[959, "slot-only-in"]], "Slot: predicates": [[961, "slot-predicates"]], "Slot: present_in": [[962, "slot-present-in"]], "Slot: present_in_ancestor_of": [[963, "slot-present-in-ancestor-of"]], "Slot: redundant": [[964, "slot-redundant"]], "Slot: redundant_with": [[965, "slot-redundant-with"]], "Slot: redundant_with_only_in": [[966, "slot-redundant-with-only-in"]], "Slot: sources": [[967, "slot-sources"], [1020, "slot-sources"]], "Slot: taxon": [[969, "slot-taxon"]], "Slot: unsatisfiable": [[971, "slot-unsatisfiable"]], "Slot: via_terms": [[972, "slot-via-terms"]], "Class: HasSpan": [[981, "class-hasspan"]], "Class: TextAnnotation": [[991, "class-textannotation"]], "Class: TextAnnotationConfiguration": [[992, "class-textannotationconfiguration"]], "Class: TextAnnotationResultSet": [[993, "class-textannotationresultset"]], "Class: TextualElement": [[994, "class-textualelement"]], "Slot: confidence": [[1001, "slot-confidence"], [1066, "slot-confidence"]], "Text Annotator Datamodel": [[1004, "text-annotator-datamodel"]], "Slot: info": [[1005, "slot-info"], [1071, "slot-info"]], "Slot: is_longest_match": [[1006, "slot-is-longest-match"]], "Slot: match_string": [[1008, "slot-match-string"]], "Slot: match_type": [[1009, "slot-match-type"]], "Slot: matches_whole_text": [[1010, "slot-matches-whole-text"]], "Slot: model": [[1011, "slot-model"]], "Slot: object_aliases": [[1012, "slot-object-aliases"]], "Slot: object_categories": [[1013, "slot-object-categories"]], "Slot: parent_document": [[1017, "slot-parent-document"]], "Slot: source_text": [[1019, "slot-source-text"]], "Slot: subject_end": [[1021, "slot-subject-end"]], "Slot: subject_start": [[1024, "slot-subject-start"]], "Slot: subject_text_id": [[1025, "slot-subject-text-id"]], "Slot: text": [[1026, "slot-text"]], "text-annotator": [[1027, "text-annotator"]], "Slot: token_exclusion_list": [[1028, "slot-token-exclusion-list"]], "Class: ConstraintComponent": [[1031, "class-constraintcomponent"]], "Class: ExternalReferenceValidationResult": [[1038, "class-externalreferencevalidationresult"]], "Class: MappingValidationResult": [[1043, "class-mappingvalidationresult"]], "Class: NamedResource": [[1044, "class-namedresource"]], "Class: RepairConfiguration": [[1049, "class-repairconfiguration"]], "Class: RepairOperation": [[1050, "class-repairoperation"]], "Class: RepairReport": [[1051, "class-repairreport"]], "Class: Report": [[1052, "class-report"]], "Class: Result": [[1053, "class-result"]], "Enum: SeverityOptions": [[1054, "enum-severityoptions"]], "Class: TypeSeverityKeyValue": [[1058, "class-typeseveritykeyvalue"]], "Class: ValidationConfiguration": [[1061, "class-validationconfiguration"]], "Class: ValidationReport": [[1062, "class-validationreport"]], "Class: ValidationResult": [[1063, "class-validationresult"]], "Enum: ValidationResultType": [[1064, "enum-validationresulttype"]], "Slot: dry_run": [[1067, "slot-dry-run"]], "Slot: http_response_code": [[1068, "slot-http-response-code"]], "Validation Results Datamodel": [[1070, "validation-results-datamodel"]], "Slot: instantiates": [[1072, "slot-instantiates"]], "Slot: max_number_results_per_type": [[1073, "slot-max-number-results-per-type"]], "Slot: modified": [[1074, "slot-modified"]], "Slot: number_of_attempts": [[1075, "slot-number-of-attempts"]], "Slot: object_info": [[1078, "slot-object-info"]], "Slot: object_str": [[1079, "slot-object-str"]], "Slot: problem": [[1082, "slot-problem"]], "Slot: prompt_info": [[1083, "slot-prompt-info"]], "Slot: repairs": [[1084, "slot-repairs"]], "Slot: schema_path": [[1086, "slot-schema-path"]], "Slot: severity": [[1087, "slot-severity"]], "Slot: subject_info": [[1091, "slot-subject-info"]], "Slot: successful": [[1092, "slot-successful"]], "Slot: suggested_modifications": [[1093, "slot-suggested-modifications"]], "Slot: suggested_predicate": [[1094, "slot-suggested-predicate"]], "Slot: time_checked": [[1095, "slot-time-checked"]], "Slot: type_severity_map": [[1097, "slot-type-severity-map"]], "Slot: validation_configuration": [[1100, "slot-validation-configuration"]], "validaton-results": [[1101, "validaton-results"]], "FAQ: Architecture and Design": [[1102, "faq-architecture-and-design"]], "What is an interface?": [[1102, "what-is-an-interface"]], "What is a Data Model?": [[1102, "what-is-a-data-model"]], "What is an iterator and why does OAK use them so much?": [[1102, "what-is-an-iterator-and-why-does-oak-use-them-so-much"]], "FAQ: Command Line": [[1103, "faq-command-line"]], "How do I see a list of commands?": [[1103, "how-do-i-see-a-list-of-commands"]], "How do I get help on a command?": [[1103, "how-do-i-get-help-on-a-command"]], "How do I get more examples of command line usage?": [[1103, "how-do-i-get-more-examples-of-command-line-usage"]], "I want to query an ontology, what do I pass for the --input option?": [[1103, "i-want-to-query-an-ontology-what-do-i-pass-for-the-input-option"]], "Why do I get a \u201cno such option\u201d error when I pass the \u201c\u2013input\u201d option?": [[1103, "why-do-i-get-a-no-such-option-error-when-i-pass-the-input-option"]], "What do the codes \u201ci\u201d and \u201cp\u201d mean?": [[1103, "what-do-the-codes-i-and-p-mean"]], "Can I pass a list of IDs (CURIEs) as input to a command?": [[1103, "can-i-pass-a-list-of-ids-curies-as-input-to-a-command"]], "Can I pass entity labels as command inputs?": [[1103, "can-i-pass-entity-labels-as-command-inputs"]], "Can I pass lexical queries as command inputs?": [[1103, "can-i-pass-lexical-queries-as-command-inputs"]], "Can I pass the results of graph queries as command inputs?": [[1103, "can-i-pass-the-results-of-graph-queries-as-command-inputs"]], "Can I make boolean combinations of query terms?": [[1103, "can-i-make-boolean-combinations-of-query-terms"]], "Can I chain commands together, unix-style?": [[1103, "can-i-chain-commands-together-unix-style"]], "What does the symbol @ mean in a query term list": [[1103, "what-does-the-symbol-mean-in-a-query-term-list"]], "Can I use the command line to visualize a subgraph?": [[1103, "can-i-use-the-command-line-to-visualize-a-subgraph"]], "Is there an over-arching philosophy or set of design principles to the OAK command line?": [[1103, "is-there-an-over-arching-philosophy-or-set-of-design-principles-to-the-oak-command-line"]], "The command isn\u2019t working the way I expected - how do I get help?": [[1103, "the-command-isn-t-working-the-way-i-expected-how-do-i-get-help"]], "FAQ: Contributing": [[1104, "faq-contributing"]], "How can I contribute?": [[1104, "how-can-i-contribute"]], "How do I stay involved?": [[1104, "how-do-i-stay-involved"]], "FAQ: General": [[1105, "faq-general"]], "What is OAK?": [[1105, "what-is-oak"]], "Are there any tutorials for OAK?": [[1105, "are-there-any-tutorials-for-oak"]], "Are there runnable examples of how to use OAK?": [[1105, "are-there-runnable-examples-of-how-to-use-oak"]], "I am familiar with both Python and Ontologies. Where should I start?": [[1105, "i-am-familiar-with-both-python-and-ontologies-where-should-i-start"]], "I find ontologies confusing. Is there a general guide to help me?": [[1105, "i-find-ontologies-confusing-is-there-a-general-guide-to-help-me"]], "Why is it called OAK?": [[1105, "why-is-it-called-oak"]], "How do I install OAK?": [[1105, "how-do-i-install-oak"]], "Can I use OAK if I don\u2019t know Python?": [[1105, "can-i-use-oak-if-i-don-t-know-python"]], "Can I contribute to OAK?": [[1105, "can-i-contribute-to-oak"]], "Is OAK just for bio-ontologies?": [[1105, "is-oak-just-for-bio-ontologies"]], "Can OAK access ontologies in ontology portals such as MatPortal or BioPortal?": [[1105, "can-oak-access-ontologies-in-ontology-portals-such-as-matportal-or-bioportal"]], "Can OAK access ontologies in triplestores such as OntoBee or Ubergraph?": [[1105, "can-oak-access-ontologies-in-triplestores-such-as-ontobee-or-ubergraph"]], "Can OAK access local files?": [[1105, "can-oak-access-local-files"]], "Can OAK access OBO Format files?": [[1105, "can-oak-access-obo-format-files"]], "Does OAK support all of OWL?": [[1105, "does-oak-support-all-of-owl"]], "Does OAK support reasoning?": [[1105, "does-oak-support-reasoning"]], "Can I use OAK to do graph queries over ontologies?": [[1105, "can-i-use-oak-to-do-graph-queries-over-ontologies"]], "Can I use OAK to do lexical search?": [[1105, "can-i-use-oak-to-do-lexical-search"]], "Can I use OAK as a text annotator?": [[1105, "can-i-use-oak-as-a-text-annotator"]], "FAQ": [[1106, "faq"]], "FAQ: Ontologies": [[1107, "faq-ontologies"]], "What is an ontology?": [[1107, "what-is-an-ontology"]], "Do we need ontologies now we have ChatGPT?": [[1107, "do-we-need-ontologies-now-we-have-chatgpt"]], "What is OWL?": [[1107, "what-is-owl"]], "What is OBO Format?": [[1107, "what-is-obo-format"]], "What is OBO": [[1107, "what-is-obo"]], "What\u2019s a synonym and how do I access them?": [[1107, "what-s-a-synonym-and-how-do-i-access-them"]], "Ancestor statistics": [[1107, "id2"], [1132, "id2"], [1138, "id1"]], "FAQ: Troubleshooting": [[1108, "faq-troubleshooting"]], "Why do I get a \u201cError: No such option: -i\u201d message": [[1108, "why-do-i-get-a-error-no-such-option-i-message"]], "How do I get a BioPortal API key?": [[1108, "how-do-i-get-a-bioportal-api-key"]], "My OBO Format file won\u2019t parse": [[1108, "my-obo-format-file-won-t-parse"]], "My OWL file takes too long to load": [[1108, "my-owl-file-takes-too-long-to-load"]], "My cached SQLite ontology is out of date": [[1108, "my-cached-sqlite-ontology-is-out-of-date"]], "I don\u2019t understand the interface/method I want to use": [[1108, "i-don-t-understand-the-interface-method-i-want-to-use"]], "Glossary": [[1109, "glossary"]], "Aliases and Synonyms": [[1110, "aliases-and-synonyms"]], "Use Cases": [[1110, "use-cases"]], "Search": [[1110, "search"], [1132, "search"], [1152, "search"], [1167, "search"]], "Text mining and NLP": [[1110, "text-mining-and-nlp"]], "Different aliases for different communities": [[1110, "different-aliases-for-different-communities"]], "Different Languages": [[1110, "different-languages"]], "Different approaches to representing synonym metadata": [[1110, "different-approaches-to-representing-synonym-metadata"]], "Representation of synonyms in OAK": [[1110, "representation-of-synonyms-in-oak"]], "Simple Core Model": [[1110, "simple-core-model"]], "HPO basic aliases": [[1110, "id1"]], "Obo Graph Data Model": [[1110, "obo-graph-data-model"]], "HPO full aliases": [[1110, "id2"]], "Associations and Curated Annotations": [[1111, "associations-and-curated-annotations"]], "Background": [[1111, "background"], [1121, "background"]], "Association support in OAK": [[1111, "association-support-in-oak"]], "Data Model": [[1111, "data-model"], [1121, "data-model"], [1175, "data-model"]], "Selecting association sources": [[1111, "selecting-association-sources"]], "Further reading": [[1111, "further-reading"], [1113, "further-reading"], [1116, "further-reading"], [1117, "further-reading"], [1119, "further-reading"], [1121, "further-reading"]], "OAK Basics": [[1112, "oak-basics"]], "What is an ontology and why would I want to access one?": [[1112, "what-is-an-ontology-and-why-would-i-want-to-access-one"]], "Ontology languages, standards, and formats": [[1112, "ontology-languages-standards-and-formats"]], "Core OAK concepts": [[1112, "core-oak-concepts"]], "Identifying entities: CURIEs and URIs": [[1113, "curies-and-uris"]], "Prefix maps": [[1113, "prefix-maps"]], "Querying prefixmaps": [[1113, "querying-prefixmaps"]], "Example prefixes": [[1113, "id1"]], "Non-default prefixmaps": [[1113, "non-default-prefixmaps"]], "Structure of identifiers": [[1113, "structure-of-identifiers"]], "The OAK Guide": [[1114, "the-oak-guide"]], "Learning More": [[1115, "learning-more"]], "Logical Definitions": [[1116, "logical-definitions"]], "Logical Definitions in OWL": [[1116, "logical-definitions-in-owl"]], "Genus-differentia form logical definitions": [[1116, "genus-differentia-form-logical-definitions"]], "The Obo Graphs Model": [[1116, "the-obo-graphs-model"]], "Querying for logical definitions in OAK": [[1116, "querying-for-logical-definitions-in-oak"]], "uberon nail logical definitions": [[1116, "id2"]], "Reasoning using logical definitions": [[1116, "reasoning-using-logical-definitions"]], "Logical definitions and design patterns": [[1116, "logical-definitions-and-design-patterns"]], "Generating logical definitions": [[1116, "generating-logical-definitions"]], "Analyzing logical definitions": [[1116, "analyzing-logical-definitions"]], "Validating logical definitions": [[1116, "validating-logical-definitions"]], "Mappings and Cross-References": [[1117, "mappings-and-cross-references"]], "Mappings in OAK": [[1117, "mappings-in-oak"]], "uberon sssom mappings": [[1117, "id1"]], "In Python": [[1117, "in-python"]], "Generating Mappings": [[1117, "generating-mappings"]], "Obsoletion": [[1118, "obsoletion"]], "Looking up obsoleted entities": [[1118, "looking-up-obsoleted-entities"]], "Conventions and standards": [[1118, "conventions-and-standards"]], "obsolete entities should not be in the signature of any logical axiom": [[1118, "obsolete-entities-should-not-be-in-the-signature-of-any-logical-axiom"]], "obsolete entities should be accompanied by metadata that provides additional context for humans and machines": [[1118, "obsolete-entities-should-be-accompanied-by-metadata-that-provides-additional-context-for-humans-and-machines"]], "Merged entities": [[1118, "merged-entities"]], "Further Reading": [[1118, "further-reading"]], "Primary Labels": [[1119, "primary-labels"]], "Looking up labels": [[1119, "looking-up-labels"]], "Custom label annotation properties": [[1119, "custom-label-annotation-properties"]], "Multilingual ontologies": [[1119, "multilingual-ontologies"]], "Other edge cases": [[1119, "other-edge-cases"]], "Relationships and Graphs": [[1120, "relationships-and-graphs"]], "Exploring relationships": [[1120, "exploring-relationships"]], "Graph Traversal and Relation Graph Reasoning": [[1120, "graph-traversal-and-relation-graph-reasoning"]], "Graph Traversal Strategies": [[1120, "graph-traversal-strategies"]], "Examples of where entailment yields more": [[1120, "examples-of-where-entailment-yields-more"]], "Examples of where graph traversal yields more ancestors than entailment": [[1120, "examples-of-where-graph-traversal-yields-more-ancestors-than-entailment"]], "Which strategy should I use?": [[1120, "which-strategy-should-i-use"]], "A note on entailed direct edges": [[1120, "a-note-on-entailed-direct-edges"]], "Computing Similarity between Entities": [[1121, "computing-similarity-between-entities"]], "Concepts": [[1121, "concepts"]], "Jaccard Similarity": [[1121, "jaccard-similarity"]], "Information Content": [[1121, "information-content"]], "Aggregate measures for comparing entities": [[1121, "aggregate-measures-for-comparing-entities"]], "Vector-based approaches": [[1121, "vector-based-approaches"]], "Implementations": [[1121, "implementations"], [1143, "implementations"], [1155, "implementations"]], "Default Implementation": [[1121, "default-implementation"]], "Ubergraph": [[1121, "ubergraph"], [1134, "ubergraph"]], "Semsimian": [[1121, "semsimian"]], "FHIR Conversions": [[1122, "fhir-conversions"]], "CLI": [[1122, "cli"]], "Config file": [[1122, "config-file"]], "How-To Guides": [[1123, "how-to-guides"]], "How to use Large Language Models (LLMs) with OAK": [[1126, "how-to-use-large-language-models-llms-with-oak"]], "LLM frameworks that use OAK": [[1126, "llm-frameworks-that-use-oak"]], "OntoGPT": [[1126, "ontogpt"]], "CurateGPT": [[1126, "curategpt"]], "Talisman": [[1126, "talisman"]], "Using OAK in conjunction with existing LLM tools": [[1126, "using-oak-in-conjunction-with-existing-llm-tools"]], "OAK LLM Adapter": [[1126, "oak-llm-adapter"]], "Annotation": [[1126, "annotation"], [1154, "annotation"], [1156, "annotation"], [1161, "annotation"]], "Suggesting Definitions": [[1126, "suggesting-definitions"]], "Validating Mappings": [[1126, "validating-mappings"]], "Selecting alternative models": [[1126, "selecting-alternative-models"]], "Installing LLM plugins": [[1126, "installing-llm-plugins"]], "Mixtral via Ollama and LiteLLM": [[1126, "mixtral-via-ollama-and-litellm"]], "Mixtral via groq and LiteLLM": [[1126, "mixtral-via-groq-and-litellm"]], "How to Validate an OBO ontology using Obo Metadata Ontology schema": [[1127, "how-to-validate-an-obo-ontology-using-obo-metadata-ontology-schema"]], "Steps": [[1127, "steps"]], "Step 1: Obtain the sqlite version of the ontology": [[1127, "step-1-obtain-the-sqlite-version-of-the-ontology"]], "Step 2: Install oaklib": [[1127, "step-2-install-oaklib"]], "Step 3: Validate an individual ontology": [[1127, "step-3-validate-an-individual-ontology"]], "Step 3 (alternative): Validate multiple ontologies": [[1127, "step-3-alternative-validate-multiple-ontologies"]], "Caveats": [[1127, "caveats"]], "Using your own schema": [[1127, "using-your-own-schema"]], "How this works": [[1127, "how-this-works"], [1136, "how-this-works"]], "Analysis": [[1127, "analysis"]], "How to write a plugin": [[1129, "how-to-write-a-plugin"]], "What is a plugin?": [[1129, "what-is-a-plugin"]], "An example plugin": [[1129, "an-example-plugin"]], "Creating a plugin": [[1129, "creating-a-plugin"]], "Discuss on the issue tracker": [[1129, "discuss-on-the-issue-tracker"]], "Create a new project": [[1129, "create-a-new-project"], [1133, "create-a-new-project"]], "Implement one or more interfaces": [[1129, "implement-one-or-more-interfaces"]], "Implement a selector": [[1129, "implement-a-selector"]], "Write tests": [[1129, "write-tests"]], "Ontology Access Kit (OAK) Documentation": [[1130, "ontology-access-kit-oak-documentation"]], "Indices and tables": [[1130, "indices-and-tables"]], "Tutorial": [[1131, "tutorial"]], "Part 1: Getting Started": [[1132, "part-1-getting-started"]], "Installation": [[1132, "installation"]], "Install from PyPI": [[1132, "install-from-pypi"]], "Run the OAK command": [[1132, "run-the-oak-command"]], "Basics": [[1132, "basics"]], "Query the OBO Library": [[1132, "query-the-obo-library"]], "Working with local files": [[1132, "working-with-local-files"]], "Introduction to graphs and trees": [[1132, "introduction-to-graphs-and-trees"]], "Fetching ancestors": [[1132, "fetching-ancestors"]], "Predicate Abbreviations": [[1132, "predicate-abbreviations"]], "Ancestor Statistics": [[1132, "ancestor-statistics"]], "Oak Trees": [[1132, "oak-trees"]], "Advanced Search": [[1132, "advanced-search"]], "Using search terms as parameters": [[1132, "using-search-terms-as-parameters"]], "Chaining Commands": [[1132, "chaining-commands"]], "Visualization": [[1132, "visualization"]], "Using other backends": [[1132, "using-other-backends"]], "Using Ubergraph": [[1132, "using-ubergraph"]], "Using Ontobee": [[1132, "using-ontobee"]], "Using BioPortal and OntoPortal": [[1132, "using-bioportal-and-ontoportal"]], "Annotate results": [[1132, "id3"]], "Using OLS": [[1132, "using-ols"]], "OLS SSSOM": [[1132, "id4"]], "Next steps": [[1132, "next-steps"]], "Part 2: Basic Python": [[1133, "part-2-basic-python"]], "Install Poetry": [[1133, "install-poetry"]], "Basic Concepts": [[1133, "basic-concepts"]], "Code the first example": [[1133, "code-the-first-example"]], "Extending the example": [[1133, "extending-the-example"]], "Part 3: Triplestore Backends": [[1134, "part-3-triplestore-backends"]], "Triplestore Concepts": [[1134, "triplestore-concepts"]], "Connecting": [[1134, "connecting"], [1167, "connecting"]], "Basic Operations": [[1134, "basic-operations"]], "Relationships": [[1134, "relationships"]], "Part 4: OboGraphs": [[1135, "part-4-obographs"]], "OboGraphs": [[1135, "obographs"]], "OboGraph Interface": [[1135, "obograph-interface"], [1176, "obograph-interface"]], "Code examples": [[1135, "code-examples"]], "Part 5: Graph Visualization": [[1136, "part-5-graph-visualization"]], "Install Graphviz": [[1136, "install-graphviz"]], "Install OBOGraphViz": [[1136, "install-obographviz"]], "Command Line Usage": [[1136, "command-line-usage"], [1146, "command-line-usage"], [1151, "command-line-usage"]], "Programmatic usage": [[1136, "programmatic-usage"]], "Part 6: Working With OWL": [[1137, "part-6-working-with-owl"]], "OWL Datamodel": [[1137, "owl-datamodel"]], "OwlInterface": [[1137, "owlinterface"]], "ROBOT Plugin": [[1137, "robot-plugin"]], "Part 7: SQLite files": [[1138, "part-7-sqlite-files"]], "Download a SQLite file": [[1138, "download-a-sqlite-file"]], "Example": [[1138, "example"]], "Fetching ready-made SQLite files": [[1138, "fetching-ready-made-sqlite-files"]], "Building your own SQLite files": [[1138, "building-your-own-sqlite-files"]], "With docker": [[1138, "with-docker"]], "Without docker": [[1138, "without-docker"]], "Validating an ontology": [[1138, "validating-an-ontology"]], "Other RDBMSs": [[1138, "other-rdbmss"]], "Python ORM": [[1138, "python-orm"]], "Part 8: Applying Changes to Ontologies": [[1139, "part-8-applying-changes-to-ontologies"]], "About KGCL": [[1139, "about-kgcl"]], "Example: Sqlite3": [[1139, "example-sqlite3"]], "Example: OBO Files": [[1139, "example-obo-files"]], "Introduction": [[1140, "introduction"]], "Basic Python Example": [[1140, "basic-python-example"]], "Basic Command Line Example": [[1140, "basic-command-line-example"]], "Jupyter Notebooks": [[1142, "jupyter-notebooks"]], "Architecture": [[1143, "architecture"]], "Ontology Interfaces": [[1143, "ontology-interfaces"]], "Other Interfaces": [[1143, "other-interfaces"]], "Example: OWL Ontology Interface": [[1143, "example-owl-ontology-interface"]], "Partial and Complete Implementation": [[1143, "partial-and-complete-implementation"]], "Best Practice": [[1144, "best-practice"]], "External Services": [[1144, "external-services"]], "Iterators": [[1144, "iterators"]], "Weaving calls together": [[1144, "weaving-calls-together"]], "Chunking": [[1144, "chunking"]], "Abstract Class": [[1145, "abstract-class"]], "Converters": [[1146, "converters"]], "Converting from Obo Graphs": [[1146, "converting-from-obo-graphs"]], "OBO Graph to CX Converter": [[1147, "obo-graph-to-cx-converter"]], "OBO Graph to FHIR Converter": [[1148, "obo-graph-to-fhir-converter"]], "OBO Graph to OBO Format Converter": [[1149, "obo-graph-to-obo-format-converter"]], "OBO Graph to OWL Converter": [[1150, "obo-graph-to-owl-converter"]], "Aggregator Adapter": [[1151, "aggregator-adapter"]], "Documentation": [[1151, "documentation"], [1159, "documentation"]], "Bioportal Adapter": [[1152, "bioportal-adapter"]], "API Keys": [[1152, "api-keys"]], "Command Line Examples": [[1152, "command-line-examples"], [1154, "command-line-examples"], [1156, "command-line-examples"], [1161, "command-line-examples"], [1163, "command-line-examples"]], "Code": [[1152, "code"], [1154, "code"], [1156, "code"], [1157, "code"], [1158, "code"], [1160, "code"], [1161, "code"], [1162, "code"], [1164, "code"], [1165, "code"], [1166, "code"], [1167, "code"]], "FunOwl Adapter": [[1153, "funowl-adapter"]], "Gilda Adapter": [[1154, "gilda-adapter"]], "LLM Adapter": [[1156, "llm-adapter"]], "Validation of Mappings": [[1156, "validation-of-mappings"]], "OBO Graph Adapter": [[1157, "obo-graph-adapter"]], "About": [[1157, "about"], [1160, "about"], [1162, "about"], [1164, "about"], [1167, "about"]], "Initialization": [[1157, "initialization"], [1162, "initialization"], [1164, "initialization"], [1166, "initialization"]], "Ontology Lookup Service (OLS) Adapter": [[1158, "ontology-lookup-service-ols-adapter"]], "Ontobee Adapter": [[1159, "ontobee-adapter"]], "Notes": [[1159, "notes"]], "Owlery Adapter": [[1160, "owlery-adapter"]], "PantherDB Adapter": [[1161, "pantherdb-adapter"]], "Enrichment": [[1161, "enrichment"]], "Mapping": [[1161, "mapping"]], "Pronto / OBO Files Adapter": [[1162, "pronto-obo-files-adapter"]], "Input Selector": [[1162, "input-selector"]], "ROBOT Template Adapter": [[1163, "robot-template-adapter"]], "Basic operations": [[1163, "basic-operations"]], "Applying KGCL commands": [[1163, "applying-kgcl-commands"]], "Simple OBO Adapter": [[1164, "simple-obo-adapter"]], "Sparql Adapter": [[1165, "sparql-adapter"]], "SQL Database Adapter": [[1166, "sql-database-adapter"]], "SQL Alchemy ORM Model": [[1166, "sql-alchemy-orm-model"]], "Ubergraph Adapter": [[1167, "ubergraph-adapter"]], "Interfaces Implemented": [[1167, "interfaces-implemented"]], "OAK Library Documentation": [[1168, "oak-library-documentation"]], "Association Provider Interface": [[1169, "association-provider-interface"]], "Command Line Use": [[1169, "command-line-use"], [1175, "command-line-use"]], "Basic Ontology Interface": [[1170, "basic-ontology-interface"]], "Class Enrichment Calculation Interface": [[1171, "class-enrichment-calculation-interface"]], "Differ Interface": [[1172, "differ-interface"]], "Dumper Interface": [[1173, "dumper-interface"]], "Interfaces": [[1174, "interfaces"]], "Mapping Provider Interface": [[1175, "mapping-provider-interface"]], "OWL Interface": [[1177, "owl-interface"]], "Patcher Interface": [[1178, "patcher-interface"]], "Relation Graph": [[1179, "relation-graph"]], "Search Interface": [[1180, "search-interface"]], "Semantic Similarity Interface": [[1181, "semantic-similarity-interface"]], "Subsetting": [[1182, "subsetting"]], "Summary Statistics": [[1183, "summary-statistics"]], "Text Annotator Interface": [[1184, "text-annotator-interface"]], "Validator Interface": [[1185, "validator-interface"]], "Ontology Adapter Selectors": [[1186, "ontology-adapter-selectors"]], "Syntax": [[1186, "syntax"]], "Schemes": [[1186, "schemes"]], "pronto": [[1186, "pronto"]], "prontolib": [[1186, "prontolib"]], "sqlite": [[1186, "sqlite"]], "obosqlite": [[1186, "obosqlite"]], "ontobee": [[1186, "ontobee"]], "ols": [[1186, "ols"]], "bioportal": [[1186, "bioportal"]], "funowl": [[1186, "funowl"]], "Functions": [[1186, "functions"]], "oaklib.utilities.apikey_manager": [[1187, "module-oaklib.utilities.apikey_manager"]], "oaklib.utilities.graph.networkx_bridge": [[1188, "module-oaklib.utilities.graph.networkx_bridge"]], "Utilities for working with networkx": [[1188, "utilities-for-working-with-networkx"]], "oaklib.utilities.graph.relationship_walker": [[1189, "module-oaklib.utilities.graph.relationship_walker"]], "Utilities for traversing Ontology Graphs": [[1189, "utilities-for-traversing-ontology-graphs"]], "oaklib.utilities.lexical.lexical_indexer": [[1190, "module-oaklib.utilities.lexical.lexical_indexer"]], "Lexical Utilities": [[1190, "lexical-utilities"]], "oaklib.utilities.obograph_utils": [[1191, "module-oaklib.utilities.obograph_utils"]], "Utilities for the OBOGraph Datamodel": [[1191, "utilities-for-the-obograph-datamodel"]], "oaklib.utilities.subsets.slimmer_utils": [[1192, "module-oaklib.utilities.subsets.slimmer_utils"]], "Utilities for working with ontology subsets (slims)": [[1192, "utilities-for-working-with-ontology-subsets-slims"]], "oaklib.utilities.table_filler": [[1193, "module-oaklib.utilities.table_filler"]], "oaklib.utilities.taxon": [[1194, "module-oaklib.utilities.taxon"]], "Utilities": [[1195, "utilities"]], "Layering on RDF/OWL": [[1196, "layering-on-rdf-owl"]], "CURIEs, URIs, and prefixmaps": [[1196, "curies-uris-and-prefixmaps"]], "Relationships between entities": [[1196, "relationships-between-entities"]], "Metadata about entities": [[1196, "metadata-about-entities"]], "Challenges": [[1196, "challenges"]], "OMO": [[1196, "omo"]], "Ontology portals": [[1196, "ontology-portals"]], "OAK Approach": [[1196, "oak-approach"]], "Labels": [[1196, "labels"]], "Obsoletion and obsoletion metadata": [[1196, "obsoletion-and-obsoletion-metadata"]], "Search Syntax": [[1197, "search-syntax"]], "Boolean Combinations": [[1197, "boolean-combinations"]], "Search Datamodel": [[1197, "search-datamodel"]]}, "indexentries": {"--about": [[0, "cmdoption-runoak-axioms-about"]], "--adapter-mapping": [[0, "cmdoption-runoak-validate-mappings-adapter-mapping"]], "--add": [[0, "cmdoption-runoak-a"]], "--add-closure-fields": [[0, "cmdoption-runoak-associations-add-closure-fields"], [0, "cmdoption-runoak-associations-counts-add-closure-fields"]], "--add-labels": [[0, "cmdoption-runoak-lexmatch-add-labels"]], "--add-mrcas": [[0, "cmdoption-runoak-tree-add-mrcas"], [0, "cmdoption-runoak-viz-add-mrcas"]], "--additional-metadata": [[0, "cmdoption-runoak-definitions-additional-metadata"], [0, "cmdoption-runoak-term-metadata-additional-metadata"]], "--all": [[0, "cmdoption-runoak-ontology-metadata-all"], [0, "cmdoption-runoak-ontology-versions-all"], [0, "cmdoption-runoak-taxon-constraints-A"]], "--all-languages": [[0, "cmdoption-runoak-labels-all-languages"]], "--allow-labels": [[0, "cmdoption-runoak-enrichment-allow-labels"]], "--allow-missing": [[0, "cmdoption-runoak-fill-table-allow-missing"]], "--analyze": [[0, "cmdoption-runoak-generate-logical-definitions-analyze"]], "--annotated-roots": [[0, "cmdoption-runoak-roots-A"]], "--apply-patch": [[0, "cmdoption-runoak-generate-definitions-apply-patch"], [0, "cmdoption-runoak-generate-lexical-replacements-apply-patch"], [0, "cmdoption-runoak-generate-synonyms-apply-patch"], [0, "cmdoption-runoak-synonymize-apply-patch"]], "--association-predicates": [[0, "cmdoption-runoak-associations-association-predicates"], [0, "cmdoption-runoak-associations-counts-association-predicates"], [0, "cmdoption-runoak-associations-matrix-association-predicates"], [0, "cmdoption-runoak-enrichment-association-predicates"]], "--associations": [[0, "cmdoption-runoak-diff-associations-g"], [0, "cmdoption-runoak-g"]], "--associations-type": [[0, "cmdoption-runoak-G"]], "--autolabel": [[0, "cmdoption-runoak-associations-autolabel"], [0, "cmdoption-runoak-associations-counts-autolabel"], [0, "cmdoption-runoak-associations-matrix-autolabel"], [0, "cmdoption-runoak-definitions-autolabel"], [0, "cmdoption-runoak-diff-associations-autolabel"], [0, "cmdoption-runoak-diff-via-mappings-autolabel"], [0, "cmdoption-runoak-disjoints-autolabel"], [0, "cmdoption-runoak-enrichment-autolabel"], [0, "cmdoption-runoak-fill-table-autolabel"], [0, "cmdoption-runoak-generate-disjoints-autolabel"], [0, "cmdoption-runoak-generate-logical-definitions-autolabel"], [0, "cmdoption-runoak-logical-definitions-autolabel"], [0, "cmdoption-runoak-mappings-autolabel"], [0, "cmdoption-runoak-normalize-autolabel"], [0, "cmdoption-runoak-paths-autolabel"], [0, "cmdoption-runoak-query-autolabel"], [0, "cmdoption-runoak-relationships-autolabel"], [0, "cmdoption-runoak-rollup-autolabel"], [0, "cmdoption-runoak-search-autolabel"], [0, "cmdoption-runoak-similarity-autolabel"], [0, "cmdoption-runoak-similarity-pair-autolabel"], [0, "cmdoption-runoak-termset-similarity-autolabel"], [0, "cmdoption-runoak-validate-mappings-autolabel"]], "--autosave": [[0, "cmdoption-runoak-autosave"]], "--axiom-type": [[0, "cmdoption-runoak-axioms-axiom-type"]], "--background-file": [[0, "cmdoption-runoak-enrichment-B"]], "--bidirectional": [[0, "cmdoption-runoak-diff-via-mappings-bidirectional"]], "--category-system": [[0, "cmdoption-runoak-term-categories-category-system"]], "--change-type": [[0, "cmdoption-runoak-diff-change-type"]], "--changes-format": [[0, "cmdoption-runoak-apply-changes-format"]], "--changes-input": [[0, "cmdoption-runoak-apply-changes-input"]], "--changes-output": [[0, "cmdoption-runoak-apply-changes-output"]], "--comment": [[0, "cmdoption-runoak-fill-table-comment"]], "--compare-with": [[0, "cmdoption-runoak-statistics-X"]], "--config-file": [[0, "cmdoption-runoak-dump-c"], [0, "cmdoption-runoak-transform-c"]], "--configuration-file": [[0, "cmdoption-runoak-annotate-C"], [0, "cmdoption-runoak-validate-mappings-C"]], "--configure": [[0, "cmdoption-runoak-paths-C"], [0, "cmdoption-runoak-tree-C"], [0, "cmdoption-runoak-viz-C"]], "--contributor": [[0, "cmdoption-runoak-apply-contributor"]], "--cutoff": [[0, "cmdoption-runoak-enrichment-cutoff"], [0, "cmdoption-runoak-validate-cutoff"], [0, "cmdoption-runoak-validate-multiple-cutoff"]], "--dangling": [[0, "cmdoption-runoak-extract-dangling"]], "--days-old": [[0, "cmdoption-runoak-cache-clear-days-old"]], "--delimiter": [[0, "cmdoption-runoak-fill-table-delimiter"]], "--direct": [[0, "cmdoption-runoak-taxon-constraints-direct"]], "--directed": [[0, "cmdoption-runoak-paths-directed"]], "--direction": [[0, "cmdoption-runoak-relationships-direction"]], "--display": [[0, "cmdoption-runoak-definitions-D"], [0, "cmdoption-runoak-descendants-D"], [0, "cmdoption-runoak-info-D"], [0, "cmdoption-runoak-labels-D"], [0, "cmdoption-runoak-tree-D"]], "--down": [[0, "cmdoption-runoak-tree-down"], [0, "cmdoption-runoak-viz-down"]], "--dry-run": [[0, "cmdoption-runoak-apply-dry-run"], [0, "cmdoption-runoak-lint-dry-run"]], "--endpoint": [[0, "cmdoption-runoak-set-apikey-e"]], "--enforce-canonical-ordering": [[0, "cmdoption-runoak-dump-enforce-canonical-ordering"]], "--ensure-strict-prefixes": [[0, "cmdoption-runoak-lexmatch-ensure-strict-prefixes"]], "--evolution-file": [[0, "cmdoption-runoak-apply-taxon-constraints-E"]], "--exclude-existing": [[0, "cmdoption-runoak-generate-disjoints-exclude-existing"]], "--exclude-predicates": [[0, "cmdoption-runoak-paths-exclude-predicates"]], "--exclude-tokens": [[0, "cmdoption-runoak-annotate-x"]], "--expand": [[0, "cmdoption-runoak-apply-expand"], [0, "cmdoption-runoak-apply-obsolete-expand"]], "--fill": [[0, "cmdoption-runoak-generate-logical-definitions-fill"]], "--filter": [[0, "cmdoption-runoak-associations-counts-F"]], "--filter-category-identical": [[0, "cmdoption-runoak-diff-via-mappings-filter-category-identical"]], "--filter-obsoletes": [[0, "cmdoption-runoak-leafs-filter-obsoletes"], [0, "cmdoption-runoak-singletons-filter-obsoletes"], [0, "cmdoption-runoak-terms-filter-obsoletes"]], "--filter-redundant": [[0, "cmdoption-runoak-enrichment-filter-redundant"]], "--gap-fill": [[0, "cmdoption-runoak-tree-gap-fill"], [0, "cmdoption-runoak-viz-gap-fill"]], "--graph-traversal-method": [[0, "cmdoption-runoak-ancestors-M"], [0, "cmdoption-runoak-apply-taxon-constraints-M"], [0, "cmdoption-runoak-descendants-M"], [0, "cmdoption-runoak-taxon-constraints-M"]], "--group-by": [[0, "cmdoption-runoak-associations-counts-group-by"], [0, "cmdoption-runoak-diff-associations-group-by"]], "--group-by-defined-by": [[0, "cmdoption-runoak-diff-group-by-defined-by"], [0, "cmdoption-runoak-statistics-group-by-defined-by"]], "--group-by-obo-namespace": [[0, "cmdoption-runoak-diff-group-by-obo-namespace"], [0, "cmdoption-runoak-statistics-group-by-obo-namespace"]], "--group-by-prefix": [[0, "cmdoption-runoak-diff-group-by-prefix"], [0, "cmdoption-runoak-statistics-group-by-prefix"]], "--group-by-property": [[0, "cmdoption-runoak-diff-group-by-property"], [0, "cmdoption-runoak-statistics-group-by-property"]], "--has-prefix": [[0, "cmdoption-runoak-roots-P"], [0, "cmdoption-runoak-statistics-P"]], "--if-absent": [[0, "cmdoption-runoak-associations-if-absent"], [0, "cmdoption-runoak-definitions-if-absent"], [0, "cmdoption-runoak-labels-if-absent"], [0, "cmdoption-runoak-logical-definitions-if-absent"], [0, "cmdoption-runoak-relationships-if-absent"]], "--ignore-invalid-changes": [[0, "cmdoption-runoak-apply-ignore-invalid-changes"], [0, "cmdoption-runoak-apply-obsolete-ignore-invalid-changes"]], "--import-depth": [[0, "cmdoption-runoak-import-depth"]], "--include-abox": [[0, "cmdoption-runoak-relationships-include-abox"]], "--include-aliases": [[0, "cmdoption-runoak-annotate-include-aliases"]], "--include-entailed": [[0, "cmdoption-runoak-relationships-include-entailed"]], "--include-entities": [[0, "cmdoption-runoak-associations-matrix-include-entities"]], "--include-identity-mappings": [[0, "cmdoption-runoak-diff-via-mappings-include-identity-mappings"]], "--include-merged": [[0, "cmdoption-runoak-obsoletes-include-merged"]], "--include-metadata": [[0, "cmdoption-runoak-extract-include-metadata"], [0, "cmdoption-runoak-relationships-include-metadata"]], "--include-predicates": [[0, "cmdoption-runoak-paths-include-predicates"]], "--include-redundant": [[0, "cmdoption-runoak-taxon-constraints-include-redundant"]], "--include-residuals": [[0, "cmdoption-runoak-statistics-include-residuals"]], "--include-tbox": [[0, "cmdoption-runoak-relationships-include-tbox"]], "--information-content-file": [[0, "cmdoption-runoak-similarity-information-content-file"], [0, "cmdoption-runoak-termset-similarity-information-content-file"]], "--input": [[0, "cmdoption-runoak-i"]], "--input-type": [[0, "cmdoption-runoak-I"]], "--intra": [[0, "cmdoption-runoak-diff-via-mappings-intra"]], "--label-fields": [[0, "cmdoption-runoak-query-L"]], "--lexical-index-file": [[0, "cmdoption-runoak-annotate-L"], [0, "cmdoption-runoak-lexmatch-L"]], "--limit": [[0, "cmdoption-runoak-associations-counts-L"]], "--main-score-field": [[0, "cmdoption-runoak-similarity-main-score-field"]], "--mapper": [[0, "cmdoption-runoak-mappings-mapper"]], "--mapping-input": [[0, "cmdoption-runoak-diff-via-mappings-mapping-input"]], "--maps-to-source": [[0, "cmdoption-runoak-mappings-M"], [0, "cmdoption-runoak-normalize-M"]], "--match-column": [[0, "cmdoption-runoak-annotate-A"]], "--matches-whole-text": [[0, "cmdoption-runoak-annotate-W"]], "--matrix-axes": [[0, "cmdoption-runoak-logical-definitions-matrix-axes"]], "--max-hops": [[0, "cmdoption-runoak-tree-max-hops"], [0, "cmdoption-runoak-viz-max-hops"]], "--merge": [[0, "cmdoption-runoak-merge"]], "--meta": [[0, "cmdoption-runoak-viz-meta"]], "--metamodel-mappings": [[0, "cmdoption-runoak-metamodel-mappings"]], "--min-ancestor-information-content": [[0, "cmdoption-runoak-similarity-min-ancestor-information-content"]], "--min-descendants": [[0, "cmdoption-runoak-generate-disjoints-M"]], "--min-facet-count": [[0, "cmdoption-runoak-associations-counts-min-facet-count"]], "--min-jaccard-similarity": [[0, "cmdoption-runoak-similarity-min-jaccard-similarity"]], "--missing-value-token": [[0, "cmdoption-runoak-fill-table-missing-value-token"]], "--model": [[0, "cmdoption-runoak-annotate-m"]], "--named-classes-only": [[0, "cmdoption-runoak-disjoints-named-classes-only"]], "--named-prefix-map": [[0, "cmdoption-runoak-named-prefix-map"]], "--narrow": [[0, "cmdoption-runoak-paths-narrow"]], "--new-date": [[0, "cmdoption-runoak-diff-associations-new-date"]], "--no-a": [[0, "cmdoption-runoak-roots-A"], [0, "cmdoption-runoak-taxon-constraints-A"]], "--no-w": [[0, "cmdoption-runoak-annotate-W"]], "--no-add-closure-fields": [[0, "cmdoption-runoak-associations-add-closure-fields"], [0, "cmdoption-runoak-associations-counts-add-closure-fields"]], "--no-add-labels": [[0, "cmdoption-runoak-lexmatch-add-labels"]], "--no-add-mrcas": [[0, "cmdoption-runoak-tree-add-mrcas"], [0, "cmdoption-runoak-viz-add-mrcas"]], "--no-additional-metadata": [[0, "cmdoption-runoak-definitions-additional-metadata"], [0, "cmdoption-runoak-term-metadata-additional-metadata"]], "--no-all": [[0, "cmdoption-runoak-ontology-metadata-all"], [0, "cmdoption-runoak-ontology-versions-all"], [0, "cmdoption-runoak-taxon-constraints-A"]], "--no-all-languages": [[0, "cmdoption-runoak-labels-all-languages"]], "--no-allow-labels": [[0, "cmdoption-runoak-enrichment-allow-labels"]], "--no-allow-missing": [[0, "cmdoption-runoak-fill-table-allow-missing"]], "--no-analyze": [[0, "cmdoption-runoak-generate-logical-definitions-analyze"]], "--no-annotated-roots": [[0, "cmdoption-runoak-roots-A"]], "--no-apply-patch": [[0, "cmdoption-runoak-generate-definitions-apply-patch"], [0, "cmdoption-runoak-generate-lexical-replacements-apply-patch"], [0, "cmdoption-runoak-generate-synonyms-apply-patch"], [0, "cmdoption-runoak-synonymize-apply-patch"]], "--no-autolabel": [[0, "cmdoption-runoak-associations-autolabel"], [0, "cmdoption-runoak-associations-counts-autolabel"], [0, "cmdoption-runoak-associations-matrix-autolabel"], [0, "cmdoption-runoak-definitions-autolabel"], [0, "cmdoption-runoak-diff-associations-autolabel"], [0, "cmdoption-runoak-diff-via-mappings-autolabel"], [0, "cmdoption-runoak-disjoints-autolabel"], [0, "cmdoption-runoak-enrichment-autolabel"], [0, "cmdoption-runoak-fill-table-autolabel"], [0, "cmdoption-runoak-generate-disjoints-autolabel"], [0, "cmdoption-runoak-generate-logical-definitions-autolabel"], [0, "cmdoption-runoak-logical-definitions-autolabel"], [0, "cmdoption-runoak-mappings-autolabel"], [0, "cmdoption-runoak-normalize-autolabel"], [0, "cmdoption-runoak-paths-autolabel"], [0, "cmdoption-runoak-query-autolabel"], [0, "cmdoption-runoak-relationships-autolabel"], [0, "cmdoption-runoak-rollup-autolabel"], [0, "cmdoption-runoak-search-autolabel"], [0, "cmdoption-runoak-similarity-autolabel"], [0, "cmdoption-runoak-similarity-pair-autolabel"], [0, "cmdoption-runoak-termset-similarity-autolabel"], [0, "cmdoption-runoak-validate-mappings-autolabel"]], "--no-autosave": [[0, "cmdoption-runoak-autosave"]], "--no-bidirectional": [[0, "cmdoption-runoak-diff-via-mappings-bidirectional"]], "--no-dangling": [[0, "cmdoption-runoak-extract-dangling"]], "--no-direct": [[0, "cmdoption-runoak-taxon-constraints-direct"]], "--no-directed": [[0, "cmdoption-runoak-paths-directed"]], "--no-down": [[0, "cmdoption-runoak-tree-down"], [0, "cmdoption-runoak-viz-down"]], "--no-dry-run": [[0, "cmdoption-runoak-apply-dry-run"], [0, "cmdoption-runoak-lint-dry-run"]], "--no-enforce-canonical-ordering": [[0, "cmdoption-runoak-dump-enforce-canonical-ordering"]], "--no-ensure-strict-prefixes": [[0, "cmdoption-runoak-lexmatch-ensure-strict-prefixes"]], "--no-exclude-existing": [[0, "cmdoption-runoak-generate-disjoints-exclude-existing"]], "--no-expand": [[0, "cmdoption-runoak-apply-expand"], [0, "cmdoption-runoak-apply-obsolete-expand"]], "--no-fill": [[0, "cmdoption-runoak-generate-logical-definitions-fill"]], "--no-filter-category-identical": [[0, "cmdoption-runoak-diff-via-mappings-filter-category-identical"]], "--no-filter-obsoletes": [[0, "cmdoption-runoak-leafs-filter-obsoletes"], [0, "cmdoption-runoak-singletons-filter-obsoletes"], [0, "cmdoption-runoak-terms-filter-obsoletes"]], "--no-filter-redundant": [[0, "cmdoption-runoak-enrichment-filter-redundant"]], "--no-gap-fill": [[0, "cmdoption-runoak-tree-gap-fill"], [0, "cmdoption-runoak-viz-gap-fill"]], "--no-group-by-defined-by": [[0, "cmdoption-runoak-diff-group-by-defined-by"], [0, "cmdoption-runoak-statistics-group-by-defined-by"]], "--no-group-by-obo-namespace": [[0, "cmdoption-runoak-diff-group-by-obo-namespace"], [0, "cmdoption-runoak-statistics-group-by-obo-namespace"]], "--no-group-by-prefix": [[0, "cmdoption-runoak-diff-group-by-prefix"], [0, "cmdoption-runoak-statistics-group-by-prefix"]], "--no-ignore-invalid-changes": [[0, "cmdoption-runoak-apply-ignore-invalid-changes"], [0, "cmdoption-runoak-apply-obsolete-ignore-invalid-changes"]], "--no-include-abox": [[0, "cmdoption-runoak-relationships-include-abox"]], "--no-include-aliases": [[0, "cmdoption-runoak-annotate-include-aliases"]], "--no-include-entailed": [[0, "cmdoption-runoak-relationships-include-entailed"]], "--no-include-entities": [[0, "cmdoption-runoak-associations-matrix-include-entities"]], "--no-include-identity-mappings": [[0, "cmdoption-runoak-diff-via-mappings-include-identity-mappings"]], "--no-include-merged": [[0, "cmdoption-runoak-obsoletes-include-merged"]], "--no-include-metadata": [[0, "cmdoption-runoak-extract-include-metadata"], [0, "cmdoption-runoak-relationships-include-metadata"]], "--no-include-predicates": [[0, "cmdoption-runoak-paths-include-predicates"]], "--no-include-redundant": [[0, "cmdoption-runoak-taxon-constraints-include-redundant"]], "--no-include-residuals": [[0, "cmdoption-runoak-statistics-include-residuals"]], "--no-include-tbox": [[0, "cmdoption-runoak-relationships-include-tbox"]], "--no-intra": [[0, "cmdoption-runoak-diff-via-mappings-intra"]], "--no-matches-whole-text": [[0, "cmdoption-runoak-annotate-W"]], "--no-merge": [[0, "cmdoption-runoak-merge"]], "--no-meta": [[0, "cmdoption-runoak-viz-meta"]], "--no-named-classes-only": [[0, "cmdoption-runoak-disjoints-named-classes-only"]], "--no-narrow": [[0, "cmdoption-runoak-paths-narrow"]], "--no-obo-model": [[0, "cmdoption-runoak-aliases-obo-model"]], "--no-ontology-only": [[0, "cmdoption-runoak-enrichment-ontology-only"]], "--no-overwrite": [[0, "cmdoption-runoak-apply-overwrite"]], "--no-parse": [[0, "cmdoption-runoak-generate-logical-definitions-parse"]], "--no-pivot-languages": [[0, "cmdoption-runoak-labels-pivot-languages"]], "--no-profile": [[0, "cmdoption-runoak-profile"]], "--no-quiet": [[0, "cmdoption-runoak-q"]], "--no-recreate": [[0, "cmdoption-runoak-lexmatch-recreate"]], "--no-replace": [[0, "cmdoption-runoak-migrate-curies-replace"]], "--no-show-extract": [[0, "cmdoption-runoak-generate-logical-definitions-show-extract"]], "--no-show-migration-relationships": [[0, "cmdoption-runoak-obsoletes-show-migration-relationships"]], "--no-simple": [[0, "cmdoption-runoak-diff-simple"]], "--no-skip-ontology-rules": [[0, "cmdoption-runoak-validate-skip-ontology-rules"]], "--no-skip-structural-validation": [[0, "cmdoption-runoak-validate-skip-structural-validation"]], "--no-skip-text-annotation": [[0, "cmdoption-runoak-validate-definitions-skip-text-annotation"]], "--no-stacktrace": [[0, "cmdoption-runoak-stacktrace"]], "--no-statistics": [[0, "cmdoption-runoak-ancestors-statistics"], [0, "cmdoption-runoak-diff-statistics"]], "--no-unmelt": [[0, "cmdoption-runoak-generate-logical-definitions-unmelt"], [0, "cmdoption-runoak-logical-definitions-unmelt"]], "--no-use-associations": [[0, "cmdoption-runoak-information-content-use-associations"]], "--no-used-only": [[0, "cmdoption-runoak-prefixes-used-only"]], "--no-view": [[0, "cmdoption-runoak-viz-view"]], "--no-viz": [[0, "cmdoption-runoak-paths-viz"]], "--object-group": [[0, "cmdoption-runoak-rollup-object-group"]], "--obo-model": [[0, "cmdoption-runoak-aliases-obo-model"]], "--old-date": [[0, "cmdoption-runoak-diff-associations-old-date"]], "--ontology-only": [[0, "cmdoption-runoak-enrichment-ontology-only"]], "--other-associations": [[0, "cmdoption-runoak-diff-associations-X"]], "--other-input": [[0, "cmdoption-runoak-diff-via-mappings-X"]], "--other-input-type": [[0, "cmdoption-runoak-diff-via-mappings-other-input-type"]], "--other-languages": [[0, "cmdoption-runoak-other-languages"]], "--other-ontology": [[0, "cmdoption-runoak-diff-X"], [0, "cmdoption-runoak-diff-terms-other-ontology"]], "--output": [[0, "cmdoption-runoak-aliases-o"], [0, "cmdoption-runoak-ancestors-o"], [0, "cmdoption-runoak-annotate-o"], [0, "cmdoption-runoak-apply-o"], [0, "cmdoption-runoak-apply-obsolete-o"], [0, "cmdoption-runoak-apply-taxon-constraints-o"], [0, "cmdoption-runoak-associations-0"], [0, "cmdoption-runoak-associations-counts-0"], [0, "cmdoption-runoak-associations-counts-o"], [0, "cmdoption-runoak-associations-matrix-0"], [0, "cmdoption-runoak-associations-matrix-o"], [0, "cmdoption-runoak-associations-o"], [0, "cmdoption-runoak-axioms-o"], [0, "cmdoption-runoak-definitions-o"], [0, "cmdoption-runoak-descendants-o"], [0, "cmdoption-runoak-diff-associations-0"], [0, "cmdoption-runoak-diff-associations-o"], [0, "cmdoption-runoak-diff-o"], [0, "cmdoption-runoak-diff-terms-o"], [0, "cmdoption-runoak-diff-via-mappings-o"], [0, "cmdoption-runoak-disjoints-o"], [0, "cmdoption-runoak-dump-o"], [0, "cmdoption-runoak-enrichment-0"], [0, "cmdoption-runoak-enrichment-o"], [0, "cmdoption-runoak-expand-subsets-o"], [0, "cmdoption-runoak-extract-o"], [0, "cmdoption-runoak-fill-table-o"], [0, "cmdoption-runoak-generate-definitions-o"], [0, "cmdoption-runoak-generate-disjoints-o"], [0, "cmdoption-runoak-generate-lexical-replacements-o"], [0, "cmdoption-runoak-generate-logical-definitions-o"], [0, "cmdoption-runoak-generate-synonyms-o"], [0, "cmdoption-runoak-info-o"], [0, "cmdoption-runoak-information-content-o"], [0, "cmdoption-runoak-labels-o"], [0, "cmdoption-runoak-leafs-o"], [0, "cmdoption-runoak-lexmatch-o"], [0, "cmdoption-runoak-lint-o"], [0, "cmdoption-runoak-logical-definitions-o"], [0, "cmdoption-runoak-mappings-o"], [0, "cmdoption-runoak-migrate-curies-o"], [0, "cmdoption-runoak-normalize-o"], [0, "cmdoption-runoak-obsoletes-o"], [0, "cmdoption-runoak-ontologies-o"], [0, "cmdoption-runoak-ontology-metadata-o"], [0, "cmdoption-runoak-ontology-versions-o"], [0, "cmdoption-runoak-paths-o"], [0, "cmdoption-runoak-prefixes-o"], [0, "cmdoption-runoak-query-o"], [0, "cmdoption-runoak-relationships-o"], [0, "cmdoption-runoak-rollup-o"], [0, "cmdoption-runoak-roots-o"], [0, "cmdoption-runoak-search-o"], [0, "cmdoption-runoak-siblings-o"], [0, "cmdoption-runoak-similarity-o"], [0, "cmdoption-runoak-similarity-pair-o"], [0, "cmdoption-runoak-singletons-o"], [0, "cmdoption-runoak-statistics-o"], [0, "cmdoption-runoak-subsets-o"], [0, "cmdoption-runoak-synonymize-o"], [0, "cmdoption-runoak-taxon-constraints-o"], [0, "cmdoption-runoak-term-categories-o"], [0, "cmdoption-runoak-term-metadata-o"], [0, "cmdoption-runoak-term-subsets-o"], [0, "cmdoption-runoak-terms-o"], [0, "cmdoption-runoak-termset-similarity-o"], [0, "cmdoption-runoak-transform-o"], [0, "cmdoption-runoak-tree-o"], [0, "cmdoption-runoak-validate-definitions-o"], [0, "cmdoption-runoak-validate-mappings-o"], [0, "cmdoption-runoak-validate-multiple-o"], [0, "cmdoption-runoak-validate-o"], [0, "cmdoption-runoak-viz-o"]], "--output-type": [[0, "cmdoption-runoak-aliases-O"], [0, "cmdoption-runoak-ancestors-O"], [0, "cmdoption-runoak-annotate-O"], [0, "cmdoption-runoak-apply-O"], [0, "cmdoption-runoak-apply-obsolete-O"], [0, "cmdoption-runoak-associations-O"], [0, "cmdoption-runoak-associations-counts-O"], [0, "cmdoption-runoak-associations-matrix-O"], [0, "cmdoption-runoak-axioms-O"], [0, "cmdoption-runoak-definitions-O"], [0, "cmdoption-runoak-descendants-O"], [0, "cmdoption-runoak-diff-O"], [0, "cmdoption-runoak-diff-associations-O"], [0, "cmdoption-runoak-diff-via-mappings-O"], [0, "cmdoption-runoak-disjoints-O"], [0, "cmdoption-runoak-dump-O"], [0, "cmdoption-runoak-enrichment-O"], [0, "cmdoption-runoak-extract-O"], [0, "cmdoption-runoak-generate-definitions-O"], [0, "cmdoption-runoak-generate-disjoints-O"], [0, "cmdoption-runoak-generate-lexical-replacements-O"], [0, "cmdoption-runoak-generate-logical-definitions-O"], [0, "cmdoption-runoak-generate-synonyms-O"], [0, "cmdoption-runoak-info-O"], [0, "cmdoption-runoak-information-content-O"], [0, "cmdoption-runoak-labels-O"], [0, "cmdoption-runoak-lint-O"], [0, "cmdoption-runoak-logical-definitions-O"], [0, "cmdoption-runoak-mappings-O"], [0, "cmdoption-runoak-migrate-curies-O"], [0, "cmdoption-runoak-normalize-O"], [0, "cmdoption-runoak-obsoletes-O"], [0, "cmdoption-runoak-ontology-metadata-O"], [0, "cmdoption-runoak-paths-O"], [0, "cmdoption-runoak-prefixes-O"], [0, "cmdoption-runoak-query-O"], [0, "cmdoption-runoak-relationships-O"], [0, "cmdoption-runoak-rollup-O"], [0, "cmdoption-runoak-roots-O"], [0, "cmdoption-runoak-search-O"], [0, "cmdoption-runoak-siblings-O"], [0, "cmdoption-runoak-similarity-O"], [0, "cmdoption-runoak-similarity-pair-O"], [0, "cmdoption-runoak-statistics-O"], [0, "cmdoption-runoak-taxon-constraints-O"], [0, "cmdoption-runoak-term-categories-O"], [0, "cmdoption-runoak-term-metadata-O"], [0, "cmdoption-runoak-term-subsets-O"], [0, "cmdoption-runoak-termset-similarity-O"], [0, "cmdoption-runoak-transform-O"], [0, "cmdoption-runoak-tree-O"], [0, "cmdoption-runoak-validate-O"], [0, "cmdoption-runoak-validate-definitions-O"], [0, "cmdoption-runoak-validate-mappings-O"], [0, "cmdoption-runoak-viz-O"]], "--overwrite": [[0, "cmdoption-runoak-apply-overwrite"]], "--owl-type": [[0, "cmdoption-runoak-terms-owl-type"]], "--parse": [[0, "cmdoption-runoak-generate-logical-definitions-parse"]], "--patch": [[0, "cmdoption-runoak-generate-definitions-patch"], [0, "cmdoption-runoak-generate-lexical-replacements-patch"], [0, "cmdoption-runoak-generate-synonyms-patch"], [0, "cmdoption-runoak-synonymize-patch"]], "--patch-format": [[0, "cmdoption-runoak-generate-definitions-patch-format"], [0, "cmdoption-runoak-generate-lexical-replacements-patch-format"], [0, "cmdoption-runoak-generate-synonyms-patch-format"]], "--patterns-file": [[0, "cmdoption-runoak-generate-logical-definitions-P"]], "--pivot-languages": [[0, "cmdoption-runoak-labels-pivot-languages"]], "--predicate-weights": [[0, "cmdoption-runoak-paths-predicate-weights"]], "--predicates": [[0, "cmdoption-runoak-ancestors-p"], [0, "cmdoption-runoak-apply-taxon-constraints-p"], [0, "cmdoption-runoak-associations-counts-p"], [0, "cmdoption-runoak-associations-matrix-p"], [0, "cmdoption-runoak-associations-p"], [0, "cmdoption-runoak-descendants-p"], [0, "cmdoption-runoak-diff-associations-p"], [0, "cmdoption-runoak-diff-via-mappings-p"], [0, "cmdoption-runoak-disjoints-p"], [0, "cmdoption-runoak-enrichment-p"], [0, "cmdoption-runoak-expand-subsets-p"], [0, "cmdoption-runoak-extract-p"], [0, "cmdoption-runoak-generate-disjoints-p"], [0, "cmdoption-runoak-information-content-p"], [0, "cmdoption-runoak-leafs-p"], [0, "cmdoption-runoak-logical-definitions-p"], [0, "cmdoption-runoak-paths-p"], [0, "cmdoption-runoak-relationships-p"], [0, "cmdoption-runoak-rollup-p"], [0, "cmdoption-runoak-roots-p"], [0, "cmdoption-runoak-siblings-p"], [0, "cmdoption-runoak-similarity-p"], [0, "cmdoption-runoak-similarity-pair-p"], [0, "cmdoption-runoak-singletons-p"], [0, "cmdoption-runoak-taxon-constraints-p"], [0, "cmdoption-runoak-term-metadata-p"], [0, "cmdoption-runoak-termset-similarity-p"], [0, "cmdoption-runoak-tree-p"], [0, "cmdoption-runoak-viz-p"]], "--preferred-language": [[0, "cmdoption-runoak-l"]], "--prefix": [[0, "cmdoption-runoak-prefix"]], "--prefixes": [[0, "cmdoption-runoak-query-P"]], "--profile": [[0, "cmdoption-runoak-profile"]], "--query": [[0, "cmdoption-runoak-query-q"]], "--quiet": [[0, "cmdoption-runoak-q"]], "--recreate": [[0, "cmdoption-runoak-lexmatch-recreate"]], "--references": [[0, "cmdoption-runoak-axioms-references"]], "--relation": [[0, "cmdoption-runoak-fill-table-relation"]], "--relation-file": [[0, "cmdoption-runoak-fill-table-relation-file"]], "--replace": [[0, "cmdoption-runoak-migrate-curies-replace"]], "--report-format": [[0, "cmdoption-runoak-lint-report-format"]], "--requests-cache-db": [[0, "cmdoption-runoak-requests-cache-db"]], "--root": [[0, "cmdoption-runoak-tree-root"]], "--rule": [[0, "cmdoption-runoak-validate-R"]], "--rules-expression": [[0, "cmdoption-runoak-generate-lexical-replacements-Y"]], "--rules-file": [[0, "cmdoption-runoak-annotate-R"], [0, "cmdoption-runoak-generate-lexical-replacements-R"], [0, "cmdoption-runoak-generate-synonyms-R"], [0, "cmdoption-runoak-lexmatch-R"], [0, "cmdoption-runoak-synonymize-R"]], "--sample-file": [[0, "cmdoption-runoak-enrichment-U"]], "--save-as": [[0, "cmdoption-runoak-save-as"]], "--schema": [[0, "cmdoption-runoak-fill-table-schema"], [0, "cmdoption-runoak-validate-multiple-s"]], "--set-value": [[0, "cmdoption-runoak-associations-S"], [0, "cmdoption-runoak-definitions-S"], [0, "cmdoption-runoak-labels-S"], [0, "cmdoption-runoak-logical-definitions-S"], [0, "cmdoption-runoak-relationships-S"]], "--set1-file": [[0, "cmdoption-runoak-similarity-set1-file"]], "--set2-file": [[0, "cmdoption-runoak-similarity-set2-file"]], "--show-extract": [[0, "cmdoption-runoak-generate-logical-definitions-show-extract"]], "--show-migration-relationships": [[0, "cmdoption-runoak-obsoletes-show-migration-relationships"]], "--simple": [[0, "cmdoption-runoak-diff-simple"]], "--skip": [[0, "cmdoption-runoak-tree-skip"]], "--skip-ontology-rules": [[0, "cmdoption-runoak-validate-skip-ontology-rules"]], "--skip-structural-validation": [[0, "cmdoption-runoak-validate-skip-structural-validation"]], "--skip-text-annotation": [[0, "cmdoption-runoak-validate-definitions-skip-text-annotation"]], "--source": [[0, "cmdoption-runoak-diff-via-mappings-S"]], "--stacktrace": [[0, "cmdoption-runoak-stacktrace"]], "--statistics": [[0, "cmdoption-runoak-ancestors-statistics"], [0, "cmdoption-runoak-diff-statistics"]], "--style-hints": [[0, "cmdoption-runoak-generate-definitions-style-hints"]], "--stylemap": [[0, "cmdoption-runoak-paths-S"], [0, "cmdoption-runoak-tree-S"], [0, "cmdoption-runoak-viz-S"]], "--target": [[0, "cmdoption-runoak-paths-target"]], "--terms-role": [[0, "cmdoption-runoak-associations-Q"], [0, "cmdoption-runoak-associations-counts-Q"], [0, "cmdoption-runoak-associations-matrix-Q"]], "--text-file": [[0, "cmdoption-runoak-annotate-text-file"]], "--transform": [[0, "cmdoption-runoak-transform-t"]], "--unmelt": [[0, "cmdoption-runoak-generate-logical-definitions-unmelt"], [0, "cmdoption-runoak-logical-definitions-unmelt"]], "--use-associations": [[0, "cmdoption-runoak-information-content-use-associations"]], "--used-only": [[0, "cmdoption-runoak-prefixes-used-only"]], "--verbose": [[0, "cmdoption-runoak-v"]], "--view": [[0, "cmdoption-runoak-viz-view"]], "--viz": [[0, "cmdoption-runoak-paths-viz"]], "--wrap-adapter": [[0, "cmdoption-runoak-W"]], "-a": [[0, "cmdoption-runoak-annotate-A"], [0, "cmdoption-runoak-roots-A"], [0, "cmdoption-runoak-taxon-constraints-A"], [0, "cmdoption-runoak-a"]], "-b": [[0, "cmdoption-runoak-enrichment-B"]], "-c": [[0, "cmdoption-runoak-annotate-C"], [0, "cmdoption-runoak-paths-C"], [0, "cmdoption-runoak-tree-C"], [0, "cmdoption-runoak-validate-mappings-C"], [0, "cmdoption-runoak-viz-C"], [0, "cmdoption-runoak-dump-c"], [0, "cmdoption-runoak-transform-c"]], "-d": [[0, "cmdoption-runoak-definitions-D"], [0, "cmdoption-runoak-descendants-D"], [0, "cmdoption-runoak-info-D"], [0, "cmdoption-runoak-labels-D"], [0, "cmdoption-runoak-tree-D"]], "-e": [[0, "cmdoption-runoak-apply-taxon-constraints-E"], [0, "cmdoption-runoak-set-apikey-e"]], "-f": [[0, "cmdoption-runoak-associations-counts-F"]], "-g": [[0, "cmdoption-runoak-G"], [0, "cmdoption-runoak-diff-associations-g"], [0, "cmdoption-runoak-g"]], "-i": [[0, "cmdoption-runoak-I"], [0, "cmdoption-runoak-i"]], "-l": [[0, "cmdoption-runoak-annotate-L"], [0, "cmdoption-runoak-associations-counts-L"], [0, "cmdoption-runoak-lexmatch-L"], [0, "cmdoption-runoak-query-L"], [0, "cmdoption-runoak-l"]], "-m": [[0, "cmdoption-runoak-ancestors-M"], [0, "cmdoption-runoak-apply-taxon-constraints-M"], [0, "cmdoption-runoak-descendants-M"], [0, "cmdoption-runoak-generate-disjoints-M"], [0, "cmdoption-runoak-mappings-M"], [0, "cmdoption-runoak-normalize-M"], [0, "cmdoption-runoak-taxon-constraints-M"], [0, "cmdoption-runoak-annotate-m"]], "-o": [[0, "cmdoption-runoak-aliases-O"], [0, "cmdoption-runoak-ancestors-O"], [0, "cmdoption-runoak-annotate-O"], [0, "cmdoption-runoak-apply-O"], [0, "cmdoption-runoak-apply-obsolete-O"], [0, "cmdoption-runoak-associations-O"], [0, "cmdoption-runoak-associations-counts-O"], [0, "cmdoption-runoak-associations-matrix-O"], [0, "cmdoption-runoak-axioms-O"], [0, "cmdoption-runoak-definitions-O"], [0, "cmdoption-runoak-descendants-O"], [0, "cmdoption-runoak-diff-O"], [0, "cmdoption-runoak-diff-associations-O"], [0, "cmdoption-runoak-diff-via-mappings-O"], [0, "cmdoption-runoak-disjoints-O"], [0, "cmdoption-runoak-dump-O"], [0, "cmdoption-runoak-enrichment-O"], [0, "cmdoption-runoak-extract-O"], [0, "cmdoption-runoak-generate-definitions-O"], [0, "cmdoption-runoak-generate-disjoints-O"], [0, "cmdoption-runoak-generate-lexical-replacements-O"], [0, "cmdoption-runoak-generate-logical-definitions-O"], [0, "cmdoption-runoak-generate-synonyms-O"], [0, "cmdoption-runoak-info-O"], [0, "cmdoption-runoak-information-content-O"], [0, "cmdoption-runoak-labels-O"], [0, "cmdoption-runoak-lint-O"], [0, "cmdoption-runoak-logical-definitions-O"], [0, "cmdoption-runoak-mappings-O"], [0, "cmdoption-runoak-migrate-curies-O"], [0, "cmdoption-runoak-normalize-O"], [0, "cmdoption-runoak-obsoletes-O"], [0, "cmdoption-runoak-ontology-metadata-O"], [0, "cmdoption-runoak-paths-O"], [0, "cmdoption-runoak-prefixes-O"], [0, "cmdoption-runoak-query-O"], [0, "cmdoption-runoak-relationships-O"], [0, "cmdoption-runoak-rollup-O"], [0, "cmdoption-runoak-roots-O"], [0, "cmdoption-runoak-search-O"], [0, "cmdoption-runoak-siblings-O"], [0, "cmdoption-runoak-similarity-O"], [0, "cmdoption-runoak-similarity-pair-O"], [0, "cmdoption-runoak-statistics-O"], [0, "cmdoption-runoak-taxon-constraints-O"], [0, "cmdoption-runoak-term-categories-O"], [0, "cmdoption-runoak-term-metadata-O"], [0, "cmdoption-runoak-term-subsets-O"], [0, "cmdoption-runoak-termset-similarity-O"], [0, "cmdoption-runoak-transform-O"], [0, "cmdoption-runoak-tree-O"], [0, "cmdoption-runoak-validate-O"], [0, "cmdoption-runoak-validate-definitions-O"], [0, "cmdoption-runoak-validate-mappings-O"], [0, "cmdoption-runoak-viz-O"], [0, "cmdoption-runoak-aliases-o"], [0, "cmdoption-runoak-ancestors-o"], [0, "cmdoption-runoak-annotate-o"], [0, "cmdoption-runoak-apply-o"], [0, "cmdoption-runoak-apply-obsolete-o"], [0, "cmdoption-runoak-apply-taxon-constraints-o"], [0, "cmdoption-runoak-associations-0"], [0, "cmdoption-runoak-associations-counts-0"], [0, "cmdoption-runoak-associations-counts-o"], [0, "cmdoption-runoak-associations-matrix-0"], [0, "cmdoption-runoak-associations-matrix-o"], [0, "cmdoption-runoak-associations-o"], [0, "cmdoption-runoak-axioms-o"], [0, "cmdoption-runoak-definitions-o"], [0, "cmdoption-runoak-descendants-o"], [0, "cmdoption-runoak-diff-associations-0"], [0, "cmdoption-runoak-diff-associations-o"], [0, "cmdoption-runoak-diff-o"], [0, "cmdoption-runoak-diff-terms-o"], [0, "cmdoption-runoak-diff-via-mappings-o"], [0, "cmdoption-runoak-disjoints-o"], [0, "cmdoption-runoak-dump-o"], [0, "cmdoption-runoak-enrichment-0"], [0, "cmdoption-runoak-enrichment-o"], [0, "cmdoption-runoak-expand-subsets-o"], [0, "cmdoption-runoak-extract-o"], [0, "cmdoption-runoak-fill-table-o"], [0, "cmdoption-runoak-generate-definitions-o"], [0, "cmdoption-runoak-generate-disjoints-o"], [0, "cmdoption-runoak-generate-lexical-replacements-o"], [0, "cmdoption-runoak-generate-logical-definitions-o"], [0, "cmdoption-runoak-generate-synonyms-o"], [0, "cmdoption-runoak-info-o"], [0, "cmdoption-runoak-information-content-o"], [0, "cmdoption-runoak-labels-o"], [0, "cmdoption-runoak-leafs-o"], [0, "cmdoption-runoak-lexmatch-o"], [0, "cmdoption-runoak-lint-o"], [0, "cmdoption-runoak-logical-definitions-o"], [0, "cmdoption-runoak-mappings-o"], [0, "cmdoption-runoak-migrate-curies-o"], [0, "cmdoption-runoak-normalize-o"], [0, "cmdoption-runoak-obsoletes-o"], [0, "cmdoption-runoak-ontologies-o"], [0, "cmdoption-runoak-ontology-metadata-o"], [0, "cmdoption-runoak-ontology-versions-o"], [0, "cmdoption-runoak-paths-o"], [0, "cmdoption-runoak-prefixes-o"], [0, "cmdoption-runoak-query-o"], [0, "cmdoption-runoak-relationships-o"], [0, "cmdoption-runoak-rollup-o"], [0, "cmdoption-runoak-roots-o"], [0, "cmdoption-runoak-search-o"], [0, "cmdoption-runoak-siblings-o"], [0, "cmdoption-runoak-similarity-o"], [0, "cmdoption-runoak-similarity-pair-o"], [0, "cmdoption-runoak-singletons-o"], [0, "cmdoption-runoak-statistics-o"], [0, "cmdoption-runoak-subsets-o"], [0, "cmdoption-runoak-synonymize-o"], [0, "cmdoption-runoak-taxon-constraints-o"], [0, "cmdoption-runoak-term-categories-o"], [0, "cmdoption-runoak-term-metadata-o"], [0, "cmdoption-runoak-term-subsets-o"], [0, "cmdoption-runoak-terms-o"], [0, "cmdoption-runoak-termset-similarity-o"], [0, "cmdoption-runoak-transform-o"], [0, "cmdoption-runoak-tree-o"], [0, "cmdoption-runoak-validate-definitions-o"], [0, "cmdoption-runoak-validate-mappings-o"], [0, "cmdoption-runoak-validate-multiple-o"], [0, "cmdoption-runoak-validate-o"], [0, "cmdoption-runoak-viz-o"]], "-p": [[0, "cmdoption-runoak-generate-logical-definitions-P"], [0, "cmdoption-runoak-query-P"], [0, "cmdoption-runoak-roots-P"], [0, "cmdoption-runoak-statistics-P"], [0, "cmdoption-runoak-ancestors-p"], [0, "cmdoption-runoak-apply-taxon-constraints-p"], [0, "cmdoption-runoak-associations-counts-p"], [0, "cmdoption-runoak-associations-matrix-p"], [0, "cmdoption-runoak-associations-p"], [0, "cmdoption-runoak-descendants-p"], [0, "cmdoption-runoak-diff-associations-p"], [0, "cmdoption-runoak-diff-via-mappings-p"], [0, "cmdoption-runoak-disjoints-p"], [0, "cmdoption-runoak-enrichment-p"], [0, "cmdoption-runoak-expand-subsets-p"], [0, "cmdoption-runoak-extract-p"], [0, "cmdoption-runoak-generate-disjoints-p"], [0, "cmdoption-runoak-information-content-p"], [0, "cmdoption-runoak-leafs-p"], [0, "cmdoption-runoak-logical-definitions-p"], [0, "cmdoption-runoak-paths-p"], [0, "cmdoption-runoak-relationships-p"], [0, "cmdoption-runoak-rollup-p"], [0, "cmdoption-runoak-roots-p"], [0, "cmdoption-runoak-siblings-p"], [0, "cmdoption-runoak-similarity-p"], [0, "cmdoption-runoak-similarity-pair-p"], [0, "cmdoption-runoak-singletons-p"], [0, "cmdoption-runoak-taxon-constraints-p"], [0, "cmdoption-runoak-term-metadata-p"], [0, "cmdoption-runoak-termset-similarity-p"], [0, "cmdoption-runoak-tree-p"], [0, "cmdoption-runoak-viz-p"]], "-q": [[0, "cmdoption-runoak-associations-Q"], [0, "cmdoption-runoak-associations-counts-Q"], [0, "cmdoption-runoak-associations-matrix-Q"], [0, "cmdoption-runoak-q"], [0, "cmdoption-runoak-query-q"]], "-r": [[0, "cmdoption-runoak-annotate-R"], [0, "cmdoption-runoak-generate-lexical-replacements-R"], [0, "cmdoption-runoak-generate-synonyms-R"], [0, "cmdoption-runoak-lexmatch-R"], [0, "cmdoption-runoak-synonymize-R"], [0, "cmdoption-runoak-validate-R"]], "-s": [[0, "cmdoption-runoak-associations-S"], [0, "cmdoption-runoak-definitions-S"], [0, "cmdoption-runoak-diff-via-mappings-S"], [0, "cmdoption-runoak-labels-S"], [0, "cmdoption-runoak-logical-definitions-S"], [0, "cmdoption-runoak-paths-S"], [0, "cmdoption-runoak-relationships-S"], [0, "cmdoption-runoak-tree-S"], [0, "cmdoption-runoak-viz-S"], [0, "cmdoption-runoak-validate-multiple-s"]], "-u": [[0, "cmdoption-runoak-enrichment-U"]], "-w": [[0, "cmdoption-runoak-W"], [0, "cmdoption-runoak-annotate-W"]], "-x": [[0, "cmdoption-runoak-diff-X"], [0, "cmdoption-runoak-diff-associations-X"], [0, "cmdoption-runoak-diff-via-mappings-X"], [0, "cmdoption-runoak-statistics-X"], [0, "cmdoption-runoak-annotate-x"]], "-y": [[0, "cmdoption-runoak-generate-lexical-replacements-Y"]], "-t": [[0, "cmdoption-runoak-transform-t"]], "-v": [[0, "cmdoption-runoak-v"]], "branches": [[0, "cmdoption-runoak-statistics-arg-BRANCHES"]], "commands": [[0, "cmdoption-runoak-apply-arg-COMMANDS"]], "constraints": [[0, "cmdoption-runoak-apply-taxon-constraints-arg-CONSTRAINTS"]], "curie_pairs": [[0, "cmdoption-runoak-migrate-curies-arg-CURIE_PAIRS"]], "dbs": [[0, "cmdoption-runoak-validate-multiple-arg-DBS"]], "keyval": [[0, "cmdoption-runoak-set-apikey-arg-KEYVAL"]], "ontologies": [[0, "cmdoption-runoak-ontology-metadata-arg-ONTOLOGIES"], [0, "cmdoption-runoak-ontology-versions-arg-ONTOLOGIES"]], "subsets": [[0, "cmdoption-runoak-expand-subsets-arg-SUBSETS"]], "table_file": [[0, "cmdoption-runoak-fill-table-arg-TABLE_FILE"]], "terms": [[0, "cmdoption-runoak-aliases-arg-TERMS"], [0, "cmdoption-runoak-ancestors-arg-TERMS"], [0, "cmdoption-runoak-apply-obsolete-arg-TERMS"], [0, "cmdoption-runoak-associations-arg-TERMS"], [0, "cmdoption-runoak-associations-counts-arg-TERMS"], [0, "cmdoption-runoak-associations-matrix-arg-TERMS"], [0, "cmdoption-runoak-axioms-arg-TERMS"], [0, "cmdoption-runoak-definitions-arg-TERMS"], [0, "cmdoption-runoak-descendants-arg-TERMS"], [0, "cmdoption-runoak-diff-terms-arg-TERMS"], [0, "cmdoption-runoak-diff-via-mappings-arg-TERMS"], [0, "cmdoption-runoak-disjoints-arg-TERMS"], [0, "cmdoption-runoak-dump-arg-TERMS"], [0, "cmdoption-runoak-enrichment-arg-TERMS"], [0, "cmdoption-runoak-extract-arg-TERMS"], [0, "cmdoption-runoak-generate-definitions-arg-TERMS"], [0, "cmdoption-runoak-generate-disjoints-arg-TERMS"], [0, "cmdoption-runoak-generate-lexical-replacements-arg-TERMS"], [0, "cmdoption-runoak-generate-logical-definitions-arg-TERMS"], [0, "cmdoption-runoak-generate-synonyms-arg-TERMS"], [0, "cmdoption-runoak-info-arg-TERMS"], [0, "cmdoption-runoak-information-content-arg-TERMS"], [0, "cmdoption-runoak-labels-arg-TERMS"], [0, "cmdoption-runoak-lexmatch-arg-TERMS"], [0, "cmdoption-runoak-logical-definitions-arg-TERMS"], [0, "cmdoption-runoak-mappings-arg-TERMS"], [0, "cmdoption-runoak-normalize-arg-TERMS"], [0, "cmdoption-runoak-obsoletes-arg-TERMS"], [0, "cmdoption-runoak-paths-arg-TERMS"], [0, "cmdoption-runoak-prefixes-arg-TERMS"], [0, "cmdoption-runoak-relationships-arg-TERMS"], [0, "cmdoption-runoak-rollup-arg-TERMS"], [0, "cmdoption-runoak-search-arg-TERMS"], [0, "cmdoption-runoak-siblings-arg-TERMS"], [0, "cmdoption-runoak-similarity-arg-TERMS"], [0, "cmdoption-runoak-similarity-pair-arg-TERMS"], [0, "cmdoption-runoak-synonymize-arg-TERMS"], [0, "cmdoption-runoak-taxon-constraints-arg-TERMS"], [0, "cmdoption-runoak-term-categories-arg-TERMS"], [0, "cmdoption-runoak-term-metadata-arg-TERMS"], [0, "cmdoption-runoak-term-subsets-arg-TERMS"], [0, "cmdoption-runoak-termset-similarity-arg-TERMS"], [0, "cmdoption-runoak-transform-arg-TERMS"], [0, "cmdoption-runoak-tree-arg-TERMS"], [0, "cmdoption-runoak-validate-arg-TERMS"], [0, "cmdoption-runoak-validate-definitions-arg-TERMS"], [0, "cmdoption-runoak-validate-mappings-arg-TERMS"], [0, "cmdoption-runoak-viz-arg-TERMS"]], "words": [[0, "cmdoption-runoak-annotate-arg-WORDS"]], "runoak command line option": [[0, "cmdoption-runoak-G"], [0, "cmdoption-runoak-I"], [0, "cmdoption-runoak-W"], [0, "cmdoption-runoak-a"], [0, "cmdoption-runoak-autosave"], [0, "cmdoption-runoak-g"], [0, "cmdoption-runoak-i"], [0, "cmdoption-runoak-import-depth"], [0, "cmdoption-runoak-l"], [0, "cmdoption-runoak-merge"], [0, "cmdoption-runoak-metamodel-mappings"], [0, "cmdoption-runoak-named-prefix-map"], [0, "cmdoption-runoak-other-languages"], [0, "cmdoption-runoak-prefix"], [0, "cmdoption-runoak-profile"], [0, "cmdoption-runoak-q"], [0, "cmdoption-runoak-requests-cache-db"], [0, "cmdoption-runoak-save-as"], [0, "cmdoption-runoak-stacktrace"], [0, "cmdoption-runoak-v"]], "runoak-aliases command line option": [[0, "cmdoption-runoak-aliases-O"], [0, "cmdoption-runoak-aliases-arg-TERMS"], [0, "cmdoption-runoak-aliases-o"], [0, "cmdoption-runoak-aliases-obo-model"]], "runoak-ancestors command line option": [[0, "cmdoption-runoak-ancestors-M"], [0, "cmdoption-runoak-ancestors-O"], [0, "cmdoption-runoak-ancestors-arg-TERMS"], [0, "cmdoption-runoak-ancestors-o"], [0, "cmdoption-runoak-ancestors-p"], [0, "cmdoption-runoak-ancestors-statistics"]], "runoak-annotate command line option": [[0, "cmdoption-runoak-annotate-A"], [0, "cmdoption-runoak-annotate-C"], [0, "cmdoption-runoak-annotate-L"], [0, "cmdoption-runoak-annotate-O"], [0, "cmdoption-runoak-annotate-R"], [0, "cmdoption-runoak-annotate-W"], [0, "cmdoption-runoak-annotate-arg-WORDS"], [0, "cmdoption-runoak-annotate-include-aliases"], [0, "cmdoption-runoak-annotate-m"], [0, "cmdoption-runoak-annotate-o"], [0, "cmdoption-runoak-annotate-text-file"], [0, "cmdoption-runoak-annotate-x"]], "runoak-apply command line option": [[0, "cmdoption-runoak-apply-O"], [0, "cmdoption-runoak-apply-arg-COMMANDS"], [0, "cmdoption-runoak-apply-changes-format"], [0, "cmdoption-runoak-apply-changes-input"], [0, "cmdoption-runoak-apply-changes-output"], [0, "cmdoption-runoak-apply-contributor"], [0, "cmdoption-runoak-apply-dry-run"], [0, "cmdoption-runoak-apply-expand"], [0, "cmdoption-runoak-apply-ignore-invalid-changes"], [0, "cmdoption-runoak-apply-o"], [0, "cmdoption-runoak-apply-overwrite"]], "runoak-apply-obsolete command line option": [[0, "cmdoption-runoak-apply-obsolete-O"], [0, "cmdoption-runoak-apply-obsolete-arg-TERMS"], [0, "cmdoption-runoak-apply-obsolete-expand"], [0, "cmdoption-runoak-apply-obsolete-ignore-invalid-changes"], [0, "cmdoption-runoak-apply-obsolete-o"]], "runoak-apply-taxon-constraints command line option": [[0, "cmdoption-runoak-apply-taxon-constraints-E"], [0, "cmdoption-runoak-apply-taxon-constraints-M"], [0, "cmdoption-runoak-apply-taxon-constraints-arg-CONSTRAINTS"], [0, "cmdoption-runoak-apply-taxon-constraints-o"], [0, "cmdoption-runoak-apply-taxon-constraints-p"]], "runoak-associations command line option": [[0, "cmdoption-runoak-associations-0"], [0, "cmdoption-runoak-associations-O"], [0, "cmdoption-runoak-associations-Q"], [0, "cmdoption-runoak-associations-S"], [0, "cmdoption-runoak-associations-add-closure-fields"], [0, "cmdoption-runoak-associations-arg-TERMS"], [0, "cmdoption-runoak-associations-association-predicates"], [0, "cmdoption-runoak-associations-autolabel"], [0, "cmdoption-runoak-associations-if-absent"], [0, "cmdoption-runoak-associations-o"], [0, "cmdoption-runoak-associations-p"]], "runoak-associations-counts command line option": [[0, "cmdoption-runoak-associations-counts-0"], [0, "cmdoption-runoak-associations-counts-F"], [0, "cmdoption-runoak-associations-counts-L"], [0, "cmdoption-runoak-associations-counts-O"], [0, "cmdoption-runoak-associations-counts-Q"], [0, "cmdoption-runoak-associations-counts-add-closure-fields"], [0, "cmdoption-runoak-associations-counts-arg-TERMS"], [0, "cmdoption-runoak-associations-counts-association-predicates"], [0, "cmdoption-runoak-associations-counts-autolabel"], [0, "cmdoption-runoak-associations-counts-group-by"], [0, "cmdoption-runoak-associations-counts-min-facet-count"], [0, "cmdoption-runoak-associations-counts-o"], [0, "cmdoption-runoak-associations-counts-p"]], "runoak-associations-matrix command line option": [[0, "cmdoption-runoak-associations-matrix-0"], [0, "cmdoption-runoak-associations-matrix-O"], [0, "cmdoption-runoak-associations-matrix-Q"], [0, "cmdoption-runoak-associations-matrix-arg-TERMS"], [0, "cmdoption-runoak-associations-matrix-association-predicates"], [0, "cmdoption-runoak-associations-matrix-autolabel"], [0, "cmdoption-runoak-associations-matrix-include-entities"], [0, "cmdoption-runoak-associations-matrix-o"], [0, "cmdoption-runoak-associations-matrix-p"]], "runoak-axioms command line option": [[0, "cmdoption-runoak-axioms-O"], [0, "cmdoption-runoak-axioms-about"], [0, "cmdoption-runoak-axioms-arg-TERMS"], [0, "cmdoption-runoak-axioms-axiom-type"], [0, "cmdoption-runoak-axioms-o"], [0, "cmdoption-runoak-axioms-references"]], "runoak-cache-clear command line option": [[0, "cmdoption-runoak-cache-clear-days-old"]], "runoak-definitions command line option": [[0, "cmdoption-runoak-definitions-D"], [0, "cmdoption-runoak-definitions-O"], [0, "cmdoption-runoak-definitions-S"], [0, "cmdoption-runoak-definitions-additional-metadata"], [0, "cmdoption-runoak-definitions-arg-TERMS"], [0, "cmdoption-runoak-definitions-autolabel"], [0, "cmdoption-runoak-definitions-if-absent"], [0, "cmdoption-runoak-definitions-o"]], "runoak-descendants command line option": [[0, "cmdoption-runoak-descendants-D"], [0, "cmdoption-runoak-descendants-M"], [0, "cmdoption-runoak-descendants-O"], [0, "cmdoption-runoak-descendants-arg-TERMS"], [0, "cmdoption-runoak-descendants-o"], [0, "cmdoption-runoak-descendants-p"]], "runoak-diff command line option": [[0, "cmdoption-runoak-diff-O"], [0, "cmdoption-runoak-diff-X"], [0, "cmdoption-runoak-diff-change-type"], [0, "cmdoption-runoak-diff-group-by-defined-by"], [0, "cmdoption-runoak-diff-group-by-obo-namespace"], [0, "cmdoption-runoak-diff-group-by-prefix"], [0, "cmdoption-runoak-diff-group-by-property"], [0, "cmdoption-runoak-diff-o"], [0, "cmdoption-runoak-diff-simple"], [0, "cmdoption-runoak-diff-statistics"]], "runoak-diff-associations command line option": [[0, "cmdoption-runoak-diff-associations-0"], [0, "cmdoption-runoak-diff-associations-O"], [0, "cmdoption-runoak-diff-associations-X"], [0, "cmdoption-runoak-diff-associations-autolabel"], [0, "cmdoption-runoak-diff-associations-g"], [0, "cmdoption-runoak-diff-associations-group-by"], [0, "cmdoption-runoak-diff-associations-new-date"], [0, "cmdoption-runoak-diff-associations-o"], [0, "cmdoption-runoak-diff-associations-old-date"], [0, "cmdoption-runoak-diff-associations-p"]], "runoak-diff-terms command line option": [[0, "cmdoption-runoak-diff-terms-arg-TERMS"], [0, "cmdoption-runoak-diff-terms-o"], [0, "cmdoption-runoak-diff-terms-other-ontology"]], "runoak-diff-via-mappings command line option": [[0, "cmdoption-runoak-diff-via-mappings-O"], [0, "cmdoption-runoak-diff-via-mappings-S"], [0, "cmdoption-runoak-diff-via-mappings-X"], [0, "cmdoption-runoak-diff-via-mappings-arg-TERMS"], [0, "cmdoption-runoak-diff-via-mappings-autolabel"], [0, "cmdoption-runoak-diff-via-mappings-bidirectional"], [0, "cmdoption-runoak-diff-via-mappings-filter-category-identical"], [0, "cmdoption-runoak-diff-via-mappings-include-identity-mappings"], [0, "cmdoption-runoak-diff-via-mappings-intra"], [0, "cmdoption-runoak-diff-via-mappings-mapping-input"], [0, "cmdoption-runoak-diff-via-mappings-o"], [0, "cmdoption-runoak-diff-via-mappings-other-input-type"], [0, "cmdoption-runoak-diff-via-mappings-p"]], "runoak-disjoints command line option": [[0, "cmdoption-runoak-disjoints-O"], [0, "cmdoption-runoak-disjoints-arg-TERMS"], [0, "cmdoption-runoak-disjoints-autolabel"], [0, "cmdoption-runoak-disjoints-named-classes-only"], [0, "cmdoption-runoak-disjoints-o"], [0, "cmdoption-runoak-disjoints-p"]], "runoak-dump command line option": [[0, "cmdoption-runoak-dump-O"], [0, "cmdoption-runoak-dump-arg-TERMS"], [0, "cmdoption-runoak-dump-c"], [0, "cmdoption-runoak-dump-enforce-canonical-ordering"], [0, "cmdoption-runoak-dump-o"]], "runoak-enrichment command line option": [[0, "cmdoption-runoak-enrichment-0"], [0, "cmdoption-runoak-enrichment-B"], [0, "cmdoption-runoak-enrichment-O"], [0, "cmdoption-runoak-enrichment-U"], [0, "cmdoption-runoak-enrichment-allow-labels"], [0, "cmdoption-runoak-enrichment-arg-TERMS"], [0, "cmdoption-runoak-enrichment-association-predicates"], [0, "cmdoption-runoak-enrichment-autolabel"], [0, "cmdoption-runoak-enrichment-cutoff"], [0, "cmdoption-runoak-enrichment-filter-redundant"], [0, "cmdoption-runoak-enrichment-o"], [0, "cmdoption-runoak-enrichment-ontology-only"], [0, "cmdoption-runoak-enrichment-p"]], "runoak-expand-subsets command line option": [[0, "cmdoption-runoak-expand-subsets-arg-SUBSETS"], [0, "cmdoption-runoak-expand-subsets-o"], [0, "cmdoption-runoak-expand-subsets-p"]], "runoak-extract command line option": [[0, "cmdoption-runoak-extract-O"], [0, "cmdoption-runoak-extract-arg-TERMS"], [0, "cmdoption-runoak-extract-dangling"], [0, "cmdoption-runoak-extract-include-metadata"], [0, "cmdoption-runoak-extract-o"], [0, "cmdoption-runoak-extract-p"]], "runoak-fill-table command line option": [[0, "cmdoption-runoak-fill-table-allow-missing"], [0, "cmdoption-runoak-fill-table-arg-TABLE_FILE"], [0, "cmdoption-runoak-fill-table-autolabel"], [0, "cmdoption-runoak-fill-table-comment"], [0, "cmdoption-runoak-fill-table-delimiter"], [0, "cmdoption-runoak-fill-table-missing-value-token"], [0, "cmdoption-runoak-fill-table-o"], [0, "cmdoption-runoak-fill-table-relation"], [0, "cmdoption-runoak-fill-table-relation-file"], [0, "cmdoption-runoak-fill-table-schema"]], "runoak-generate-definitions command line option": [[0, "cmdoption-runoak-generate-definitions-O"], [0, "cmdoption-runoak-generate-definitions-apply-patch"], [0, "cmdoption-runoak-generate-definitions-arg-TERMS"], [0, "cmdoption-runoak-generate-definitions-o"], [0, "cmdoption-runoak-generate-definitions-patch"], [0, "cmdoption-runoak-generate-definitions-patch-format"], [0, "cmdoption-runoak-generate-definitions-style-hints"]], "runoak-generate-disjoints command line option": [[0, "cmdoption-runoak-generate-disjoints-M"], [0, "cmdoption-runoak-generate-disjoints-O"], [0, "cmdoption-runoak-generate-disjoints-arg-TERMS"], [0, "cmdoption-runoak-generate-disjoints-autolabel"], [0, "cmdoption-runoak-generate-disjoints-exclude-existing"], [0, "cmdoption-runoak-generate-disjoints-o"], [0, "cmdoption-runoak-generate-disjoints-p"]], "runoak-generate-lexical-replacements command line option": [[0, "cmdoption-runoak-generate-lexical-replacements-O"], [0, "cmdoption-runoak-generate-lexical-replacements-R"], [0, "cmdoption-runoak-generate-lexical-replacements-Y"], [0, "cmdoption-runoak-generate-lexical-replacements-apply-patch"], [0, "cmdoption-runoak-generate-lexical-replacements-arg-TERMS"], [0, "cmdoption-runoak-generate-lexical-replacements-o"], [0, "cmdoption-runoak-generate-lexical-replacements-patch"], [0, "cmdoption-runoak-generate-lexical-replacements-patch-format"]], "runoak-generate-logical-definitions command line option": [[0, "cmdoption-runoak-generate-logical-definitions-O"], [0, "cmdoption-runoak-generate-logical-definitions-P"], [0, "cmdoption-runoak-generate-logical-definitions-analyze"], [0, "cmdoption-runoak-generate-logical-definitions-arg-TERMS"], [0, "cmdoption-runoak-generate-logical-definitions-autolabel"], [0, "cmdoption-runoak-generate-logical-definitions-fill"], [0, "cmdoption-runoak-generate-logical-definitions-o"], [0, "cmdoption-runoak-generate-logical-definitions-parse"], [0, "cmdoption-runoak-generate-logical-definitions-show-extract"], [0, "cmdoption-runoak-generate-logical-definitions-unmelt"]], "runoak-generate-synonyms command line option": [[0, "cmdoption-runoak-generate-synonyms-O"], [0, "cmdoption-runoak-generate-synonyms-R"], [0, "cmdoption-runoak-generate-synonyms-apply-patch"], [0, "cmdoption-runoak-generate-synonyms-arg-TERMS"], [0, "cmdoption-runoak-generate-synonyms-o"], [0, "cmdoption-runoak-generate-synonyms-patch"], [0, "cmdoption-runoak-generate-synonyms-patch-format"]], "runoak-info command line option": [[0, "cmdoption-runoak-info-D"], [0, "cmdoption-runoak-info-O"], [0, "cmdoption-runoak-info-arg-TERMS"], [0, "cmdoption-runoak-info-o"]], "runoak-information-content command line option": [[0, "cmdoption-runoak-information-content-O"], [0, "cmdoption-runoak-information-content-arg-TERMS"], [0, "cmdoption-runoak-information-content-o"], [0, "cmdoption-runoak-information-content-p"], [0, "cmdoption-runoak-information-content-use-associations"]], "runoak-labels command line option": [[0, "cmdoption-runoak-labels-D"], [0, "cmdoption-runoak-labels-O"], [0, "cmdoption-runoak-labels-S"], [0, "cmdoption-runoak-labels-all-languages"], [0, "cmdoption-runoak-labels-arg-TERMS"], [0, "cmdoption-runoak-labels-if-absent"], [0, "cmdoption-runoak-labels-o"], [0, "cmdoption-runoak-labels-pivot-languages"]], "runoak-leafs command line option": [[0, "cmdoption-runoak-leafs-filter-obsoletes"], [0, "cmdoption-runoak-leafs-o"], [0, "cmdoption-runoak-leafs-p"]], "runoak-lexmatch command line option": [[0, "cmdoption-runoak-lexmatch-L"], [0, "cmdoption-runoak-lexmatch-R"], [0, "cmdoption-runoak-lexmatch-add-labels"], [0, "cmdoption-runoak-lexmatch-arg-TERMS"], [0, "cmdoption-runoak-lexmatch-ensure-strict-prefixes"], [0, "cmdoption-runoak-lexmatch-o"], [0, "cmdoption-runoak-lexmatch-recreate"]], "runoak-lint command line option": [[0, "cmdoption-runoak-lint-O"], [0, "cmdoption-runoak-lint-dry-run"], [0, "cmdoption-runoak-lint-o"], [0, "cmdoption-runoak-lint-report-format"]], "runoak-logical-definitions command line option": [[0, "cmdoption-runoak-logical-definitions-O"], [0, "cmdoption-runoak-logical-definitions-S"], [0, "cmdoption-runoak-logical-definitions-arg-TERMS"], [0, "cmdoption-runoak-logical-definitions-autolabel"], [0, "cmdoption-runoak-logical-definitions-if-absent"], [0, "cmdoption-runoak-logical-definitions-matrix-axes"], [0, "cmdoption-runoak-logical-definitions-o"], [0, "cmdoption-runoak-logical-definitions-p"], [0, "cmdoption-runoak-logical-definitions-unmelt"]], "runoak-mappings command line option": [[0, "cmdoption-runoak-mappings-M"], [0, "cmdoption-runoak-mappings-O"], [0, "cmdoption-runoak-mappings-arg-TERMS"], [0, "cmdoption-runoak-mappings-autolabel"], [0, "cmdoption-runoak-mappings-mapper"], [0, "cmdoption-runoak-mappings-o"]], "runoak-migrate-curies command line option": [[0, "cmdoption-runoak-migrate-curies-O"], [0, "cmdoption-runoak-migrate-curies-arg-CURIE_PAIRS"], [0, "cmdoption-runoak-migrate-curies-o"], [0, "cmdoption-runoak-migrate-curies-replace"]], "runoak-normalize command line option": [[0, "cmdoption-runoak-normalize-M"], [0, "cmdoption-runoak-normalize-O"], [0, "cmdoption-runoak-normalize-arg-TERMS"], [0, "cmdoption-runoak-normalize-autolabel"], [0, "cmdoption-runoak-normalize-o"]], "runoak-obsoletes command line option": [[0, "cmdoption-runoak-obsoletes-O"], [0, "cmdoption-runoak-obsoletes-arg-TERMS"], [0, "cmdoption-runoak-obsoletes-include-merged"], [0, "cmdoption-runoak-obsoletes-o"], [0, "cmdoption-runoak-obsoletes-show-migration-relationships"]], "runoak-ontologies command line option": [[0, "cmdoption-runoak-ontologies-o"]], "runoak-ontology-metadata command line option": [[0, "cmdoption-runoak-ontology-metadata-O"], [0, "cmdoption-runoak-ontology-metadata-all"], [0, "cmdoption-runoak-ontology-metadata-arg-ONTOLOGIES"], [0, "cmdoption-runoak-ontology-metadata-o"]], "runoak-ontology-versions command line option": [[0, "cmdoption-runoak-ontology-versions-all"], [0, "cmdoption-runoak-ontology-versions-arg-ONTOLOGIES"], [0, "cmdoption-runoak-ontology-versions-o"]], "runoak-paths command line option": [[0, "cmdoption-runoak-paths-C"], [0, "cmdoption-runoak-paths-O"], [0, "cmdoption-runoak-paths-S"], [0, "cmdoption-runoak-paths-arg-TERMS"], [0, "cmdoption-runoak-paths-autolabel"], [0, "cmdoption-runoak-paths-directed"], [0, "cmdoption-runoak-paths-exclude-predicates"], [0, "cmdoption-runoak-paths-include-predicates"], [0, "cmdoption-runoak-paths-narrow"], [0, "cmdoption-runoak-paths-o"], [0, "cmdoption-runoak-paths-p"], [0, "cmdoption-runoak-paths-predicate-weights"], [0, "cmdoption-runoak-paths-target"], [0, "cmdoption-runoak-paths-viz"]], "runoak-prefixes command line option": [[0, "cmdoption-runoak-prefixes-O"], [0, "cmdoption-runoak-prefixes-arg-TERMS"], [0, "cmdoption-runoak-prefixes-o"], [0, "cmdoption-runoak-prefixes-used-only"]], "runoak-query command line option": [[0, "cmdoption-runoak-query-L"], [0, "cmdoption-runoak-query-O"], [0, "cmdoption-runoak-query-P"], [0, "cmdoption-runoak-query-autolabel"], [0, "cmdoption-runoak-query-o"], [0, "cmdoption-runoak-query-q"]], "runoak-relationships command line option": [[0, "cmdoption-runoak-relationships-O"], [0, "cmdoption-runoak-relationships-S"], [0, "cmdoption-runoak-relationships-arg-TERMS"], [0, "cmdoption-runoak-relationships-autolabel"], [0, "cmdoption-runoak-relationships-direction"], [0, "cmdoption-runoak-relationships-if-absent"], [0, "cmdoption-runoak-relationships-include-abox"], [0, "cmdoption-runoak-relationships-include-entailed"], [0, "cmdoption-runoak-relationships-include-metadata"], [0, "cmdoption-runoak-relationships-include-tbox"], [0, "cmdoption-runoak-relationships-o"], [0, "cmdoption-runoak-relationships-p"]], "runoak-rollup command line option": [[0, "cmdoption-runoak-rollup-O"], [0, "cmdoption-runoak-rollup-arg-TERMS"], [0, "cmdoption-runoak-rollup-autolabel"], [0, "cmdoption-runoak-rollup-o"], [0, "cmdoption-runoak-rollup-object-group"], [0, "cmdoption-runoak-rollup-p"]], "runoak-roots command line option": [[0, "cmdoption-runoak-roots-A"], [0, "cmdoption-runoak-roots-O"], [0, "cmdoption-runoak-roots-P"], [0, "cmdoption-runoak-roots-o"], [0, "cmdoption-runoak-roots-p"]], "runoak-search command line option": [[0, "cmdoption-runoak-search-O"], [0, "cmdoption-runoak-search-arg-TERMS"], [0, "cmdoption-runoak-search-autolabel"], [0, "cmdoption-runoak-search-o"]], "runoak-set-apikey command line option": [[0, "cmdoption-runoak-set-apikey-arg-KEYVAL"], [0, "cmdoption-runoak-set-apikey-e"]], "runoak-siblings command line option": [[0, "cmdoption-runoak-siblings-O"], [0, "cmdoption-runoak-siblings-arg-TERMS"], [0, "cmdoption-runoak-siblings-o"], [0, "cmdoption-runoak-siblings-p"]], "runoak-similarity command line option": [[0, "cmdoption-runoak-similarity-O"], [0, "cmdoption-runoak-similarity-arg-TERMS"], [0, "cmdoption-runoak-similarity-autolabel"], [0, "cmdoption-runoak-similarity-information-content-file"], [0, "cmdoption-runoak-similarity-main-score-field"], [0, "cmdoption-runoak-similarity-min-ancestor-information-content"], [0, "cmdoption-runoak-similarity-min-jaccard-similarity"], [0, "cmdoption-runoak-similarity-o"], [0, "cmdoption-runoak-similarity-p"], [0, "cmdoption-runoak-similarity-set1-file"], [0, "cmdoption-runoak-similarity-set2-file"]], "runoak-similarity-pair command line option": [[0, "cmdoption-runoak-similarity-pair-O"], [0, "cmdoption-runoak-similarity-pair-arg-TERMS"], [0, "cmdoption-runoak-similarity-pair-autolabel"], [0, "cmdoption-runoak-similarity-pair-o"], [0, "cmdoption-runoak-similarity-pair-p"]], "runoak-singletons command line option": [[0, "cmdoption-runoak-singletons-filter-obsoletes"], [0, "cmdoption-runoak-singletons-o"], [0, "cmdoption-runoak-singletons-p"]], "runoak-statistics command line option": [[0, "cmdoption-runoak-statistics-O"], [0, "cmdoption-runoak-statistics-P"], [0, "cmdoption-runoak-statistics-X"], [0, "cmdoption-runoak-statistics-arg-BRANCHES"], [0, "cmdoption-runoak-statistics-group-by-defined-by"], [0, "cmdoption-runoak-statistics-group-by-obo-namespace"], [0, "cmdoption-runoak-statistics-group-by-prefix"], [0, "cmdoption-runoak-statistics-group-by-property"], [0, "cmdoption-runoak-statistics-include-residuals"], [0, "cmdoption-runoak-statistics-o"]], "runoak-subsets command line option": [[0, "cmdoption-runoak-subsets-o"]], "runoak-synonymize command line option": [[0, "cmdoption-runoak-synonymize-R"], [0, "cmdoption-runoak-synonymize-apply-patch"], [0, "cmdoption-runoak-synonymize-arg-TERMS"], [0, "cmdoption-runoak-synonymize-o"], [0, "cmdoption-runoak-synonymize-patch"]], "runoak-taxon-constraints command line option": [[0, "cmdoption-runoak-taxon-constraints-A"], [0, "cmdoption-runoak-taxon-constraints-M"], [0, "cmdoption-runoak-taxon-constraints-O"], [0, "cmdoption-runoak-taxon-constraints-arg-TERMS"], [0, "cmdoption-runoak-taxon-constraints-direct"], [0, "cmdoption-runoak-taxon-constraints-include-redundant"], [0, "cmdoption-runoak-taxon-constraints-o"], [0, "cmdoption-runoak-taxon-constraints-p"]], "runoak-term-categories command line option": [[0, "cmdoption-runoak-term-categories-O"], [0, "cmdoption-runoak-term-categories-arg-TERMS"], [0, "cmdoption-runoak-term-categories-category-system"], [0, "cmdoption-runoak-term-categories-o"]], "runoak-term-metadata command line option": [[0, "cmdoption-runoak-term-metadata-O"], [0, "cmdoption-runoak-term-metadata-additional-metadata"], [0, "cmdoption-runoak-term-metadata-arg-TERMS"], [0, "cmdoption-runoak-term-metadata-o"], [0, "cmdoption-runoak-term-metadata-p"]], "runoak-term-subsets command line option": [[0, "cmdoption-runoak-term-subsets-O"], [0, "cmdoption-runoak-term-subsets-arg-TERMS"], [0, "cmdoption-runoak-term-subsets-o"]], "runoak-terms command line option": [[0, "cmdoption-runoak-terms-filter-obsoletes"], [0, "cmdoption-runoak-terms-o"], [0, "cmdoption-runoak-terms-owl-type"]], "runoak-termset-similarity command line option": [[0, "cmdoption-runoak-termset-similarity-O"], [0, "cmdoption-runoak-termset-similarity-arg-TERMS"], [0, "cmdoption-runoak-termset-similarity-autolabel"], [0, "cmdoption-runoak-termset-similarity-information-content-file"], [0, "cmdoption-runoak-termset-similarity-o"], [0, "cmdoption-runoak-termset-similarity-p"]], "runoak-transform command line option": [[0, "cmdoption-runoak-transform-O"], [0, "cmdoption-runoak-transform-arg-TERMS"], [0, "cmdoption-runoak-transform-c"], [0, "cmdoption-runoak-transform-o"], [0, "cmdoption-runoak-transform-t"]], "runoak-tree command line option": [[0, "cmdoption-runoak-tree-C"], [0, "cmdoption-runoak-tree-D"], [0, "cmdoption-runoak-tree-O"], [0, "cmdoption-runoak-tree-S"], [0, "cmdoption-runoak-tree-add-mrcas"], [0, "cmdoption-runoak-tree-arg-TERMS"], [0, "cmdoption-runoak-tree-down"], [0, "cmdoption-runoak-tree-gap-fill"], [0, "cmdoption-runoak-tree-max-hops"], [0, "cmdoption-runoak-tree-o"], [0, "cmdoption-runoak-tree-p"], [0, "cmdoption-runoak-tree-root"], [0, "cmdoption-runoak-tree-skip"]], "runoak-validate command line option": [[0, "cmdoption-runoak-validate-O"], [0, "cmdoption-runoak-validate-R"], [0, "cmdoption-runoak-validate-arg-TERMS"], [0, "cmdoption-runoak-validate-cutoff"], [0, "cmdoption-runoak-validate-o"], [0, "cmdoption-runoak-validate-skip-ontology-rules"], [0, "cmdoption-runoak-validate-skip-structural-validation"]], "runoak-validate-definitions command line option": [[0, "cmdoption-runoak-validate-definitions-O"], [0, "cmdoption-runoak-validate-definitions-arg-TERMS"], [0, "cmdoption-runoak-validate-definitions-o"], [0, "cmdoption-runoak-validate-definitions-skip-text-annotation"]], "runoak-validate-mappings command line option": [[0, "cmdoption-runoak-validate-mappings-C"], [0, "cmdoption-runoak-validate-mappings-O"], [0, "cmdoption-runoak-validate-mappings-adapter-mapping"], [0, "cmdoption-runoak-validate-mappings-arg-TERMS"], [0, "cmdoption-runoak-validate-mappings-autolabel"], [0, "cmdoption-runoak-validate-mappings-o"]], "runoak-validate-multiple command line option": [[0, "cmdoption-runoak-validate-multiple-arg-DBS"], [0, "cmdoption-runoak-validate-multiple-cutoff"], [0, "cmdoption-runoak-validate-multiple-o"], [0, "cmdoption-runoak-validate-multiple-s"]], "runoak-viz command line option": [[0, "cmdoption-runoak-viz-C"], [0, "cmdoption-runoak-viz-O"], [0, "cmdoption-runoak-viz-S"], [0, "cmdoption-runoak-viz-add-mrcas"], [0, "cmdoption-runoak-viz-arg-TERMS"], [0, "cmdoption-runoak-viz-down"], [0, "cmdoption-runoak-viz-gap-fill"], [0, "cmdoption-runoak-viz-max-hops"], [0, "cmdoption-runoak-viz-meta"], [0, "cmdoption-runoak-viz-o"], [0, "cmdoption-runoak-viz-p"], [0, "cmdoption-runoak-viz-view"]], "ancestor": [[1109, "term-Ancestor"]], "annotation": [[1109, "term-Annotation"]], "annotationproperty": [[1109, "term-AnnotationProperty"]], "asserted": [[1109, "term-Asserted"]], "association": [[1109, "term-Association"]], "bioportal": [[1109, "term-Bioportal"]], "curie": [[1109, "term-CURIE"]], "category": [[1109, "term-Category"]], "class": [[1109, "term-Class"]], "closure": [[1109, "term-Closure"]], "concept": [[1109, "term-Concept"]], "datamodel": [[1109, "term-Datamodel"]], "datatypeproperty": [[1109, "term-DatatypeProperty"]], "descendant": [[1109, "term-Descendant"]], "diff": [[1109, "term-Diff"]], "edge": [[1109, "term-Edge"]], "entailed": [[1109, "term-Entailed"]], "funowl": [[1109, "term-FunOWL"]], "functional syntax": [[1109, "term-Functional-Syntax"]], "graph": [[1109, "term-Graph"]], "graph traversal": [[1109, "term-Graph-Traversal"]], "is_a:": [[1109, "term-IS_A"]], "identifier": [[1109, "term-Identifier"]], "implementation": [[1109, "term-Implementation"]], "information content": [[1109, "term-Information-Content"]], "input selector": [[1109, "term-Input-Selector"]], "interface": [[1109, "term-Interface"]], "iterator": [[1109, "term-Iterator"]], "kgcl": [[1109, "term-KGCL"]], "label": [[1109, "term-Label"]], "logical definition": [[1109, "term-Logical-Definition"]], "mapping": [[1109, "term-Mapping"]], "name": [[1109, "term-Name"]], "named individual": [[1109, "term-Named-Individual"]], "node": [[1109, "term-Node"]], "obo format": [[1109, "term-OBO-Format"]], "obo graphs": [[1109, "term-OBO-Graphs"]], "ols": [[1109, "term-OLS"]], "owl": [[1109, "term-OWL"]], "owl annotation": [[1109, "term-OWL-Annotation"]], "object": [[1109, "term-Object"]], "object closure": [[1109, "term-Object-Closure"]], "objectproperty": [[1109, "term-ObjectProperty"]], "ontogpt": [[1109, "term-OntoGPT"]], "ontoportal": [[1109, "term-OntoPortal"]], "ontobee": [[1109, "term-Ontobee"]], "ontology": [[1109, "term-Ontology"]], "ontology element": [[1109, "term-Ontology-Element"]], "ontology format": [[1109, "term-Ontology-Format"]], "ontology graph projection": [[1109, "term-Ontology-Graph-Projection"]], "part of": [[1109, "term-Part-Of"]], "patch": [[1109, "term-Patch"]], "predicate": [[1109, "term-Predicate"]], "pronto": [[1109, "term-Pronto"]], "property": [[1109, "term-Property"]], "rdf": [[1109, "term-RDF"]], "reasoner": [[1109, "term-Reasoner"]], "reasoning": [[1109, "term-Reasoning"]], "reflexive": [[1109, "term-Reflexive"]], "relation graph": [[1109, "term-Relation-Graph"]], "relationship": [[1109, "term-Relationship"]], "relationship type": [[1109, "term-Relationship-Type"]], "sparql": [[1109, "term-SPARQL"]], "sql": [[1109, "term-SQL"]], "sssom": [[1109, "term-SSSOM"]], "semantic sql": [[1109, "term-Semantic-SQL"]], "semantic similarity": [[1109, "term-Semantic-Similarity"]], "subject": [[1109, "term-Subject"]], "subject closure": [[1109, "term-Subject-Closure"]], "subset": [[1109, "term-Subset"]], "tautology": [[1109, "term-Tautology"]], "term": [[1109, "term-Term"]], "text annotation": [[1109, "term-Text-Annotation"]], "triple": [[1109, "term-Triple"]], "triplestore": [[1109, "term-Triplestore"]], "uri": [[1109, "term-URI"]], "ubergraph": [[1109, "term-Ubergraph"]], "datamodelconverter (class in oaklib.converters.data_model_converter)": [[1145, "oaklib.converters.data_model_converter.DataModelConverter"]], "convert() (oaklib.converters.data_model_converter.datamodelconverter method)": [[1145, "oaklib.converters.data_model_converter.DataModelConverter.convert"]], "curie_converter (oaklib.converters.data_model_converter.datamodelconverter attribute)": [[1145, "oaklib.converters.data_model_converter.DataModelConverter.curie_converter"]], "dump() (oaklib.converters.data_model_converter.datamodelconverter method)": [[1145, "oaklib.converters.data_model_converter.DataModelConverter.dump"]], "enforce_canonical_ordering (oaklib.converters.data_model_converter.datamodelconverter attribute)": [[1145, "oaklib.converters.data_model_converter.DataModelConverter.enforce_canonical_ordering"]], "labeler (oaklib.converters.data_model_converter.datamodelconverter attribute)": [[1145, "oaklib.converters.data_model_converter.DataModelConverter.labeler"]], "obographtocxconverter (class in oaklib.converters.obo_graph_to_cx_converter)": [[1147, "oaklib.converters.obo_graph_to_cx_converter.OboGraphToCXConverter"]], "convert() (oaklib.converters.obo_graph_to_cx_converter.obographtocxconverter method)": [[1147, "oaklib.converters.obo_graph_to_cx_converter.OboGraphToCXConverter.convert"]], "dump() (oaklib.converters.obo_graph_to_cx_converter.obographtocxconverter method)": [[1147, "oaklib.converters.obo_graph_to_cx_converter.OboGraphToCXConverter.dump"]], "obographtofhirconverter (class in oaklib.converters.obo_graph_to_fhir_converter)": [[1148, "oaklib.converters.obo_graph_to_fhir_converter.OboGraphToFHIRConverter"]], "code() (oaklib.converters.obo_graph_to_fhir_converter.obographtofhirconverter method)": [[1148, "oaklib.converters.obo_graph_to_fhir_converter.OboGraphToFHIRConverter.code"]], "convert() (oaklib.converters.obo_graph_to_fhir_converter.obographtofhirconverter method)": [[1148, "oaklib.converters.obo_graph_to_fhir_converter.OboGraphToFHIRConverter.convert"]], "dump() (oaklib.converters.obo_graph_to_fhir_converter.obographtofhirconverter method)": [[1148, "oaklib.converters.obo_graph_to_fhir_converter.OboGraphToFHIRConverter.dump"]], "obographtooboformatconverter (class in oaklib.converters.obo_graph_to_obo_format_converter)": [[1149, "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter"]], "as_bytes_io() (oaklib.converters.obo_graph_to_obo_format_converter.obographtooboformatconverter method)": [[1149, "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter.as_bytes_io"]], "convert() (oaklib.converters.obo_graph_to_obo_format_converter.obographtooboformatconverter method)": [[1149, "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter.convert"]], "dump() (oaklib.converters.obo_graph_to_obo_format_converter.obographtooboformatconverter method)": [[1149, "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter.dump"]], "dumps() (oaklib.converters.obo_graph_to_obo_format_converter.obographtooboformatconverter method)": [[1149, "oaklib.converters.obo_graph_to_obo_format_converter.OboGraphToOboFormatConverter.dumps"]], "aggregatorimplementation (class in oaklib.implementations.aggregator.aggregator_implementation)": [[1151, "oaklib.implementations.aggregator.aggregator_implementation.AggregatorImplementation"]], "funowlimplementation (class in oaklib.implementations.funowl.funowl_implementation)": [[1153, "oaklib.implementations.funowl.funowl_implementation.FunOwlImplementation"]], "gildaimplementation (class in oaklib.implementations.gilda)": [[1154, "oaklib.implementations.gilda.GildaImplementation"]], "obographimplementation (class in oaklib.implementations.obograph.obograph_implementation)": [[1157, "oaklib.implementations.obograph.obograph_implementation.OboGraphImplementation"]], "olsimplementation (class in oaklib.implementations.ols.ols_implementation)": [[1158, "oaklib.implementations.ols.ols_implementation.OlsImplementation"]], "ontobeeimplementation (class in oaklib.implementations.ontobee.ontobee_implementation)": [[1159, "oaklib.implementations.ontobee.ontobee_implementation.OntobeeImplementation"]], "owleryimplementation (class in oaklib.implementations.owlery.owlery_implementation)": [[1160, "oaklib.implementations.owlery.owlery_implementation.OwleryImplementation"]], "pantherdbimplementation (class in oaklib.implementations.pantherdb.pantherdb_implementation)": [[1161, "oaklib.implementations.pantherdb.pantherdb_implementation.PantherDBImplementation"]], "prontoimplementation (class in oaklib.implementations.pronto.pronto_implementation)": [[1162, "oaklib.implementations.pronto.pronto_implementation.ProntoImplementation"]], "simpleoboimplementation (class in oaklib.implementations.simpleobo.simple_obo_implementation)": [[1164, "oaklib.implementations.simpleobo.simple_obo_implementation.SimpleOboImplementation"]], "sparqlimplementation (class in oaklib.implementations.sparql.sparql_implementation)": [[1165, "oaklib.implementations.sparql.sparql_implementation.SparqlImplementation"]], "edge (class in semsql.sqla.semsql)": [[1166, "semsql.sqla.semsql.Edge"]], "entailededge (class in semsql.sqla.semsql)": [[1166, "semsql.sqla.semsql.EntailedEdge"]], "sqlimplementation (class in oaklib.implementations.sqldb.sql_implementation)": [[1166, "oaklib.implementations.sqldb.sql_implementation.SqlImplementation"]], "statements (class in semsql.sqla.semsql)": [[1166, "semsql.sqla.semsql.Statements"]], "create() (oaklib.implementations.sqldb.sql_implementation.sqlimplementation class method)": [[1166, "oaklib.implementations.sqldb.sql_implementation.SqlImplementation.create"]], "relationgraphenum (class in oaklib.implementations.ubergraph.ubergraph_implementation)": [[1167, "oaklib.implementations.ubergraph.ubergraph_implementation.RelationGraphEnum"]], "ubergraphimplementation (class in oaklib.implementations.ubergraph.ubergraph_implementation)": [[1167, "oaklib.implementations.ubergraph.ubergraph_implementation.UbergraphImplementation"]], "associationproviderinterface (class in oaklib.interfaces.association_provider_interface)": [[1169, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface"]], "add_associations() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1169, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.add_associations"]], "association_counts() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1169, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.association_counts"]], "association_pairwise_coassociations() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1169, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.association_pairwise_coassociations"]], "association_subject_counts() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1169, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.association_subject_counts"]], "associations() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1169, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.associations"]], "associations_subject_search() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1169, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.associations_subject_search"]], "associations_subjects() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1169, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.associations_subjects"]], "map_associations() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1169, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.map_associations"]], "normalize_association() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1169, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.normalize_association"]], "normalize_associations() (oaklib.interfaces.association_provider_interface.associationproviderinterface method)": [[1169, "oaklib.interfaces.association_provider_interface.AssociationProviderInterface.normalize_associations"]], "basicontologyinterface (class in oaklib.interfaces.basic_ontology_interface)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface"]], "add_missing_property_values() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.add_missing_property_values"]], "alias_map_by_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.alias_map_by_curie"]], "aliases_by_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.aliases_by_curie"]], "all_entity_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.all_entity_curies"]], "all_obsolete_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.all_obsolete_curies"]], "all_ontology_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.all_ontology_curies"]], "all_relationships() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.all_relationships"]], "all_subset_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.all_subset_curies"]], "auto_relax_axioms (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.auto_relax_axioms"]], "autosave (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.autosave"]], "cache_lookups (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.cache_lookups"]], "clone() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.clone"]], "comments() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.comments"]], "converter (oaklib.interfaces.basic_ontology_interface.basicontologyinterface property)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.converter"]], "create_entity() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.create_entity"]], "curie_to_uri() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.curie_to_uri"]], "curies_by_label() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.curies_by_label"]], "curies_by_subset() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.curies_by_subset"]], "dangling() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.dangling"]], "default_language (oaklib.interfaces.basic_ontology_interface.basicontologyinterface property)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.default_language"]], "defined_by() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.defined_by"]], "defined_bys() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.defined_bys"]], "definition() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.definition"]], "definitions() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.definitions"]], "delete_entity() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.delete_entity"]], "edge_index (oaklib.interfaces.basic_ontology_interface.basicontologyinterface property)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.edge_index"]], "entailed_edge_index (oaklib.interfaces.basic_ontology_interface.basicontologyinterface property)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entailed_edge_index"]], "entities() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entities"]], "entities_metadata_statements() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entities_metadata_statements"]], "entity_alias_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entity_alias_map"]], "entity_aliases() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entity_aliases"]], "entity_metadata_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.entity_metadata_map"]], "exclude_owl_top_and_bottom (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.exclude_owl_top_and_bottom"]], "get_curies_by_label() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.get_curies_by_label"]], "get_definition_by_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.get_definition_by_curie"]], "get_label_by_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.get_label_by_curie"]], "get_labels_for_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.get_labels_for_curies"]], "get_prefix_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.get_prefix_map"]], "hierarchical_parents() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.hierarchical_parents"]], "incoming_relationship_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.incoming_relationship_map"]], "incoming_relationships() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.incoming_relationships"]], "label() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.label"]], "labels() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.labels"]], "languages() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.languages"]], "leafs() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.leafs"]], "multilingual (oaklib.interfaces.basic_ontology_interface.basicontologyinterface property)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.multilingual"]], "multilingual_labels() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.multilingual_labels"]], "obsoletes() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.obsoletes"]], "obsoletes_migration_relationships() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.obsoletes_migration_relationships"]], "ontologies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.ontologies"]], "ontology_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.ontology_curies"]], "ontology_metadata_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.ontology_metadata_map"]], "ontology_metamodel_mapper (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.ontology_metamodel_mapper"]], "ontology_versions() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.ontology_versions"]], "outgoing_relationship_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.outgoing_relationship_map"]], "outgoing_relationships() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.outgoing_relationships"]], "owl_type() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.owl_type"]], "owl_types() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.owl_types"]], "precompute_lookups() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.precompute_lookups"]], "prefix_map() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.prefix_map"]], "query() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.query"]], "relationships() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.relationships"]], "relationships_metadata() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.relationships_metadata"]], "roots() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.roots"]], "save() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.save"]], "set_label() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.set_label"]], "set_metamodel_mappings() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.set_metamodel_mappings"]], "simple_mappings() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.simple_mappings"]], "simple_mappings_by_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.simple_mappings_by_curie"]], "singletons() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.singletons"]], "strict (oaklib.interfaces.basic_ontology_interface.basicontologyinterface attribute)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.strict"]], "subset_curies() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.subset_curies"]], "subset_members() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.subset_members"]], "subsets() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.subsets"]], "terms_categories() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.terms_categories"]], "terms_subsets() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.terms_subsets"]], "uri_to_curie() (oaklib.interfaces.basic_ontology_interface.basicontologyinterface method)": [[1170, "oaklib.interfaces.basic_ontology_interface.BasicOntologyInterface.uri_to_curie"]], "classenrichmentcalculationinterface (class in oaklib.interfaces.class_enrichment_calculation_interface)": [[1171, "oaklib.interfaces.class_enrichment_calculation_interface.ClassEnrichmentCalculationInterface"]], "create_self_associations() (oaklib.interfaces.class_enrichment_calculation_interface.classenrichmentcalculationinterface method)": [[1171, "oaklib.interfaces.class_enrichment_calculation_interface.ClassEnrichmentCalculationInterface.create_self_associations"]], "enriched_classes() (oaklib.interfaces.class_enrichment_calculation_interface.classenrichmentcalculationinterface method)": [[1171, "oaklib.interfaces.class_enrichment_calculation_interface.ClassEnrichmentCalculationInterface.enriched_classes"]], "differinterface (class in oaklib.interfaces.differ_interface)": [[1172, "oaklib.interfaces.differ_interface.DifferInterface"]], "autosave (oaklib.interfaces.differ_interface.differinterface attribute)": [[1172, "oaklib.interfaces.differ_interface.DifferInterface.autosave"]], "compare_ontology_term_lists() (oaklib.interfaces.differ_interface.differinterface method)": [[1172, "oaklib.interfaces.differ_interface.DifferInterface.compare_ontology_term_lists"]], "diff() (oaklib.interfaces.differ_interface.differinterface method)": [[1172, "oaklib.interfaces.differ_interface.DifferInterface.diff"]], "diff_summary() (oaklib.interfaces.differ_interface.differinterface method)": [[1172, "oaklib.interfaces.differ_interface.DifferInterface.diff_summary"]], "exclude_owl_top_and_bottom (oaklib.interfaces.differ_interface.differinterface attribute)": [[1172, "oaklib.interfaces.differ_interface.DifferInterface.exclude_owl_top_and_bottom"]], "grouped_diff() (oaklib.interfaces.differ_interface.differinterface method)": [[1172, "oaklib.interfaces.differ_interface.DifferInterface.grouped_diff"]], "dumperinterface (class in oaklib.interfaces.dumper_interface)": [[1173, "oaklib.interfaces.dumper_interface.DumperInterface"]], "autosave (oaklib.interfaces.dumper_interface.dumperinterface attribute)": [[1173, "oaklib.interfaces.dumper_interface.DumperInterface.autosave"]], "dump() (oaklib.interfaces.dumper_interface.dumperinterface method)": [[1173, "oaklib.interfaces.dumper_interface.DumperInterface.dump"]], "exclude_owl_top_and_bottom (oaklib.interfaces.dumper_interface.dumperinterface attribute)": [[1173, "oaklib.interfaces.dumper_interface.DumperInterface.exclude_owl_top_and_bottom"]], "mappingproviderinterface (class in oaklib.interfaces.mapping_provider_interface)": [[1175, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface"]], "all_sssom_mappings() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1175, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.all_sssom_mappings"]], "autosave (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface attribute)": [[1175, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.autosave"]], "create_normalization_map() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1175, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.create_normalization_map"]], "exclude_owl_top_and_bottom (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface attribute)": [[1175, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.exclude_owl_top_and_bottom"]], "get_sssom_mappings_by_curie() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1175, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.get_sssom_mappings_by_curie"]], "get_transitive_mappings_by_curie() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1175, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.get_transitive_mappings_by_curie"]], "normalize() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1175, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.normalize"]], "normalize_prefix() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1175, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.normalize_prefix"]], "sssom_mappings() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1175, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.sssom_mappings"]], "sssom_mappings_by_source() (oaklib.interfaces.mapping_provider_interface.mappingproviderinterface method)": [[1175, "oaklib.interfaces.mapping_provider_interface.MappingProviderInterface.sssom_mappings_by_source"]], "obographinterface (class in oaklib.interfaces.obograph_interface)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface"]], "traversalconfiguration (class in oaklib.interfaces.obograph_interface)": [[1176, "oaklib.interfaces.obograph_interface.TraversalConfiguration"]], "add_metadata() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.add_metadata"]], "ancestor_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.ancestor_graph"]], "ancestors() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.ancestors"]], "as_obograph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.as_obograph"]], "descendant_count() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.descendant_count"]], "descendant_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.descendant_graph"]], "descendants() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.descendants"]], "disable_transitive_query_cache() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.disable_transitive_query_cache"]], "disjoint_class_expressions_axioms() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.disjoint_class_expressions_axioms"]], "edges() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.edges"]], "enable_transitive_query_cache() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.enable_transitive_query_cache"]], "extract_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.extract_graph"]], "load_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.load_graph"]], "logical_definitions() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.logical_definitions"]], "node() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.node"]], "nodes() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.nodes"]], "paths() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.paths"]], "relationships_to_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.relationships_to_graph"]], "subgraph_from_traversal() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.subgraph_from_traversal"]], "synonym_map_for_curies() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.synonym_map_for_curies"]], "walk_up_relationship_graph() (oaklib.interfaces.obograph_interface.obographinterface method)": [[1176, "oaklib.interfaces.obograph_interface.OboGraphInterface.walk_up_relationship_graph"]], "owlinterface (class in oaklib.interfaces.owl_interface)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface"]], "annotation_assertion_axioms() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.annotation_assertion_axioms"]], "axiom_is_about() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.axiom_is_about"]], "axiom_references() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.axiom_references"]], "disjoint_pairs() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.disjoint_pairs"]], "equivalence_axioms() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.equivalence_axioms"]], "is_disjoint() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.is_disjoint"]], "is_satisfiable() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.is_satisfiable"]], "property_characteristics() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.property_characteristics"]], "reasoner_configurations() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.reasoner_configurations"]], "simple_subproperty_of_chains() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.simple_subproperty_of_chains"]], "subclass_axioms() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.subclass_axioms"]], "transitive_object_properties() (oaklib.interfaces.owl_interface.owlinterface method)": [[1177, "oaklib.interfaces.owl_interface.OwlInterface.transitive_object_properties"]], "patcherinterface (class in oaklib.interfaces.patcher_interface)": [[1178, "oaklib.interfaces.patcher_interface.PatcherInterface"]], "apply_patch() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1178, "oaklib.interfaces.patcher_interface.PatcherInterface.apply_patch"]], "auto_add_contributor_using (oaklib.interfaces.patcher_interface.patcherinterface attribute)": [[1178, "oaklib.interfaces.patcher_interface.PatcherInterface.auto_add_contributor_using"]], "expand_change() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1178, "oaklib.interfaces.patcher_interface.PatcherInterface.expand_change"]], "expand_changes() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1178, "oaklib.interfaces.patcher_interface.PatcherInterface.expand_changes"]], "ignore_invalid_changes (oaklib.interfaces.patcher_interface.patcherinterface attribute)": [[1178, "oaklib.interfaces.patcher_interface.PatcherInterface.ignore_invalid_changes"]], "migrate_curies() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1178, "oaklib.interfaces.patcher_interface.PatcherInterface.migrate_curies"]], "reverse_changes() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1178, "oaklib.interfaces.patcher_interface.PatcherInterface.reverse_changes"]], "save() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1178, "oaklib.interfaces.patcher_interface.PatcherInterface.save"]], "undo() (oaklib.interfaces.patcher_interface.patcherinterface method)": [[1178, "oaklib.interfaces.patcher_interface.PatcherInterface.undo"]], "relationgraphinterface (class in oaklib.interfaces.relation_graph_interface)": [[1179, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface"]], "autosave (oaklib.interfaces.relation_graph_interface.relationgraphinterface attribute)": [[1179, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface.autosave"]], "entailed_incoming_relationships() (oaklib.interfaces.relation_graph_interface.relationgraphinterface method)": [[1179, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface.entailed_incoming_relationships"]], "entailed_outgoing_relationships() (oaklib.interfaces.relation_graph_interface.relationgraphinterface method)": [[1179, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface.entailed_outgoing_relationships"]], "entailed_relationships_between() (oaklib.interfaces.relation_graph_interface.relationgraphinterface method)": [[1179, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface.entailed_relationships_between"]], "exclude_owl_top_and_bottom (oaklib.interfaces.relation_graph_interface.relationgraphinterface attribute)": [[1179, "oaklib.interfaces.relation_graph_interface.RelationGraphInterface.exclude_owl_top_and_bottom"]], "searchconfiguration (class in oaklib.interfaces.search_interface)": [[1180, "oaklib.interfaces.search_interface.SearchConfiguration"]], "searchinterface (class in oaklib.interfaces.search_interface)": [[1180, "oaklib.interfaces.search_interface.SearchInterface"]], "autosave (oaklib.interfaces.search_interface.searchinterface attribute)": [[1180, "oaklib.interfaces.search_interface.SearchInterface.autosave"]], "basic_search() (oaklib.interfaces.search_interface.searchinterface method)": [[1180, "oaklib.interfaces.search_interface.SearchInterface.basic_search"]], "exclude_owl_top_and_bottom (oaklib.interfaces.search_interface.searchinterface attribute)": [[1180, "oaklib.interfaces.search_interface.SearchInterface.exclude_owl_top_and_bottom"]], "multiterm_search() (oaklib.interfaces.search_interface.searchinterface method)": [[1180, "oaklib.interfaces.search_interface.SearchInterface.multiterm_search"]], "semanticsimilarityinterface (class in oaklib.interfaces.semsim_interface)": [[1181, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface"]], "all_by_all_pairwise_similarity() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1181, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.all_by_all_pairwise_similarity"]], "cached_information_content_map (oaklib.interfaces.semsim_interface.semanticsimilarityinterface attribute)": [[1181, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.cached_information_content_map"]], "common_ancestors() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1181, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.common_ancestors"]], "get_information_content() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1181, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.get_information_content"]], "information_content_scores() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1181, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.information_content_scores"]], "most_recent_common_ancestors() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1181, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.most_recent_common_ancestors"]], "multiset_most_recent_common_ancestors() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1181, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.multiset_most_recent_common_ancestors"]], "pairwise_similarity() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1181, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.pairwise_similarity"]], "setwise_most_recent_common_ancestors() (oaklib.interfaces.semsim_interface.semanticsimilarityinterface method)": [[1181, "oaklib.interfaces.semsim_interface.SemanticSimilarityInterface.setwise_most_recent_common_ancestors"]], "subsetterinterface (class in oaklib.interfaces.subsetter_interface)": [[1182, "oaklib.interfaces.subsetter_interface.SubsetterInterface"]], "autosave (oaklib.interfaces.subsetter_interface.subsetterinterface attribute)": [[1182, "oaklib.interfaces.subsetter_interface.SubsetterInterface.autosave"]], "exclude_owl_top_and_bottom (oaklib.interfaces.subsetter_interface.subsetterinterface attribute)": [[1182, "oaklib.interfaces.subsetter_interface.SubsetterInterface.exclude_owl_top_and_bottom"]], "extract_subset_ontology() (oaklib.interfaces.subsetter_interface.subsetterinterface method)": [[1182, "oaklib.interfaces.subsetter_interface.SubsetterInterface.extract_subset_ontology"]], "gap_fill_relationships() (oaklib.interfaces.subsetter_interface.subsetterinterface method)": [[1182, "oaklib.interfaces.subsetter_interface.SubsetterInterface.gap_fill_relationships"]], "summarystatisticsinterface (class in oaklib.interfaces.summary_statistics_interface)": [[1183, "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface"]], "branch_summary_statistics() (oaklib.interfaces.summary_statistics_interface.summarystatisticsinterface method)": [[1183, "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface.branch_summary_statistics"]], "global_summary_statistics() (oaklib.interfaces.summary_statistics_interface.summarystatisticsinterface method)": [[1183, "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface.global_summary_statistics"]], "metadata_property_summary_statistics() (oaklib.interfaces.summary_statistics_interface.summarystatisticsinterface method)": [[1183, "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface.metadata_property_summary_statistics"]], "summary_statistic_description() (oaklib.interfaces.summary_statistics_interface.summarystatisticsinterface method)": [[1183, "oaklib.interfaces.summary_statistics_interface.SummaryStatisticsInterface.summary_statistic_description"]], "textannotation (class in oaklib.datamodels.text_annotator)": [[1184, "oaklib.datamodels.text_annotator.TextAnnotation"]], "textannotatorinterface (class in oaklib.interfaces.text_annotator_interface)": [[1184, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface"]], "annotate_file() (oaklib.interfaces.text_annotator_interface.textannotatorinterface method)": [[1184, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.annotate_file"]], "annotate_tabular_file() (oaklib.interfaces.text_annotator_interface.textannotatorinterface method)": [[1184, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.annotate_tabular_file"]], "annotate_text() (oaklib.interfaces.text_annotator_interface.textannotatorinterface method)": [[1184, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.annotate_text"]], "cache_directory (oaklib.interfaces.text_annotator_interface.textannotatorinterface attribute)": [[1184, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.cache_directory"]], "lexical_index (oaklib.interfaces.text_annotator_interface.textannotatorinterface attribute)": [[1184, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.lexical_index"]], "rule_collection (oaklib.interfaces.text_annotator_interface.textannotatorinterface attribute)": [[1184, "oaklib.interfaces.text_annotator_interface.TextAnnotatorInterface.rule_collection"]], "validatorinterface (class in oaklib.interfaces.validator_interface)": [[1185, "oaklib.interfaces.validator_interface.ValidatorInterface"]], "autosave (oaklib.interfaces.validator_interface.validatorinterface attribute)": [[1185, "oaklib.interfaces.validator_interface.ValidatorInterface.autosave"]], "exclude_owl_top_and_bottom (oaklib.interfaces.validator_interface.validatorinterface attribute)": [[1185, "oaklib.interfaces.validator_interface.ValidatorInterface.exclude_owl_top_and_bottom"]], "is_coherent() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1185, "oaklib.interfaces.validator_interface.ValidatorInterface.is_coherent"]], "repair() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1185, "oaklib.interfaces.validator_interface.ValidatorInterface.repair"]], "term_curies_without_definitions() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1185, "oaklib.interfaces.validator_interface.ValidatorInterface.term_curies_without_definitions"]], "unsatisfiable_classes() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1185, "oaklib.interfaces.validator_interface.ValidatorInterface.unsatisfiable_classes"]], "validate() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1185, "oaklib.interfaces.validator_interface.ValidatorInterface.validate"]], "validate_mappings() (oaklib.interfaces.validator_interface.validatorinterface method)": [[1185, "oaklib.interfaces.validator_interface.ValidatorInterface.validate_mappings"]], "add_associations() (in module oaklib.selector)": [[1186, "oaklib.selector.add_associations"]], "get_adapter() (in module oaklib.selector)": [[1186, "oaklib.selector.get_adapter"]], "get_implementation_class_from_scheme() (in module oaklib.selector)": [[1186, "oaklib.selector.get_implementation_class_from_scheme"]], "get_implementation_from_shorthand() (in module oaklib.selector)": [[1186, "oaklib.selector.get_implementation_from_shorthand"]], "get_resource_from_shorthand() (in module oaklib.selector)": [[1186, "oaklib.selector.get_resource_from_shorthand"]], "module": [[1186, "module-oaklib.selector"], [1187, "module-oaklib.utilities.apikey_manager"], [1188, "module-oaklib.utilities.graph.networkx_bridge"], [1189, "module-oaklib.utilities.graph.relationship_walker"], [1190, "module-oaklib.utilities.lexical.lexical_indexer"], [1191, "module-oaklib.utilities.obograph_utils"], [1192, "module-oaklib.utilities.subsets.slimmer_utils"], [1193, "module-oaklib.utilities.table_filler"], [1194, "module-oaklib.utilities.taxon"], [1197, "module-oaklib.datamodels.search"]], "oaklib.selector": [[1186, "module-oaklib.selector"]], "oaklib.utilities.apikey_manager": [[1187, "module-oaklib.utilities.apikey_manager"]], "oaklib.utilities.graph.networkx_bridge": [[1188, "module-oaklib.utilities.graph.networkx_bridge"]], "oaklib.utilities.graph.relationship_walker": [[1189, "module-oaklib.utilities.graph.relationship_walker"]], "oaklib.utilities.lexical.lexical_indexer": [[1190, "module-oaklib.utilities.lexical.lexical_indexer"]], "oaklib.utilities.obograph_utils": [[1191, "module-oaklib.utilities.obograph_utils"]], "oaklib.utilities.subsets.slimmer_utils": [[1192, "module-oaklib.utilities.subsets.slimmer_utils"]], "oaklib.utilities.table_filler": [[1193, "module-oaklib.utilities.table_filler"]], "oaklib.utilities.taxon": [[1194, "module-oaklib.utilities.taxon"]], "searchconfiguration (class in oaklib.datamodels.search)": [[1197, "oaklib.datamodels.search.SearchConfiguration"]], "create_search_configuration() (in module oaklib.datamodels.search)": [[1197, "oaklib.datamodels.search.create_search_configuration"]], "oaklib.datamodels.search": [[1197, "module-oaklib.datamodels.search"]]}}) \ No newline at end of file