diff --git a/poetry.lock b/poetry.lock
index 77e5aaf3..87a22c77 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,17 +1,20 @@
 # This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand.
 
 [[package]]
-name = "alabaster"
-version = "0.7.13"
-description = "A configurable sidebar-enabled Sphinx theme"
-category = "dev"
+name = "annotated-types"
+version = "0.5.0"
+description = "Reusable constraint types to use with typing.Annotated"
+category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 files = [
-    {file = "alabaster-0.7.13-py3-none-any.whl", hash = "sha256:1ee19aca801bbabb5ba3f5f258e4422dfa86f82f3e9cefb0859b283cdd7f62a3"},
-    {file = "alabaster-0.7.13.tar.gz", hash = "sha256:a27a4a084d5e690e16e01e03ad2b2e552c61a65469419b907243193de1a84ae2"},
+    {file = "annotated_types-0.5.0-py3-none-any.whl", hash = "sha256:58da39888f92c276ad970249761ebea80ba544b77acddaa1a4d6cf78287d45fd"},
+    {file = "annotated_types-0.5.0.tar.gz", hash = "sha256:47cdc3490d9ac1506ce92c7aaa76c579dc3509ff11e098fc867e5130ab7be802"},
 ]
 
+[package.dependencies]
+typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.9\""}
+
 [[package]]
 name = "antlr4-python3-runtime"
 version = "4.9.3"
@@ -57,21 +60,6 @@ docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-
 tests = ["attrs[tests-no-zope]", "zope-interface"]
 tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
 
-[[package]]
-name = "babel"
-version = "2.12.1"
-description = "Internationalization utilities"
-category = "dev"
-optional = false
-python-versions = ">=3.7"
-files = [
-    {file = "Babel-2.12.1-py3-none-any.whl", hash = "sha256:b4246fb7677d3b98f501a39d43396d3cafdc8eadb045f4a31be01863f655c610"},
-    {file = "Babel-2.12.1.tar.gz", hash = "sha256:cc2d99999cd01d44420ae725a21c9e3711b3aadc7976d6147f622d8581963455"},
-]
-
-[package.dependencies]
-pytz = {version = ">=2015.7", markers = "python_version < \"3.9\""}
-
 [[package]]
 name = "beautifulsoup4"
 version = "4.12.2"
@@ -91,47 +79,16 @@ soupsieve = ">1.2"
 html5lib = ["html5lib"]
 lxml = ["lxml"]
 
-[[package]]
-name = "bioregistry"
-version = "0.6.99"
-description = "Integrated registry of biological databases and nomenclatures"
-category = "main"
-optional = false
-python-versions = ">=3.7"
-files = [
-    {file = "bioregistry-0.6.99-py3-none-any.whl", hash = "sha256:7c30edaea11cbed1e13f64ba1debdabc12b65b70c0bc2d904b8b2ed692b9a404"},
-    {file = "bioregistry-0.6.99.tar.gz", hash = "sha256:22bc981f39c5aaa1a5430d695728a6dade6edcbfb0abbc2e42b4013a9fe4102b"},
-]
-
-[package.dependencies]
-click = "*"
-curies = "*"
-more-click = ">=0.1.2"
-pydantic = "*"
-pystow = ">=0.1.13"
-requests = "*"
-tqdm = "*"
-
-[package.extras]
-align = ["beautifulsoup4", "class-resolver", "defusedxml", "fairsharing-client (>=0.1.0)", "pyyaml", "tabulate"]
-charts = ["matplotlib", "matplotlib-venn", "pandas", "seaborn"]
-docs = ["autodoc-pydantic", "sphinx", "sphinx-autodoc-typehints (==1.21.1)", "sphinx-automodapi", "sphinx-click", "sphinx-rtd-theme"]
-export = ["ndex2", "pyyaml", "rdflib", "rdflib-jsonld"]
-gha = ["more-itertools"]
-health = ["click-default-group", "pandas", "pyyaml", "tabulate"]
-tests = ["coverage", "more-itertools", "pytest"]
-web = ["bootstrap-flask (<=2.0.0)", "flasgger", "flask", "markdown", "pyyaml", "rdflib", "rdflib-jsonld"]
-
 [[package]]
 name = "certifi"
-version = "2023.5.7"
+version = "2023.7.22"
 description = "Python package for providing Mozilla's CA Bundle."
 category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
-    {file = "certifi-2023.5.7-py3-none-any.whl", hash = "sha256:c6c2e98f5c7869efca1f8916fed228dd91539f9f1b444c314c06eef02980c716"},
-    {file = "certifi-2023.5.7.tar.gz", hash = "sha256:0f0d56dc5a6ad56fd4ba36484d6cc34451e1c6548c61daad8c320169f91eddc7"},
+    {file = "certifi-2023.7.22-py3-none-any.whl", hash = "sha256:92d6037539857d8206b8f6ae472e8b77db8058fec5937a1ef3f54304089edbb9"},
+    {file = "certifi-2023.7.22.tar.gz", hash = "sha256:539cc1d13202e33ca466e88b2807e29f4c13049d6d87031a3c110744495cb082"},
 ]
 
 [[package]]
@@ -150,111 +107,111 @@ rdflib = ">=0.4.2"
 
 [[package]]
 name = "chardet"
-version = "5.1.0"
+version = "5.2.0"
 description = "Universal encoding detector for Python 3"
 category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
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-    {file = "chardet-5.1.0.tar.gz", hash = "sha256:0d62712b956bc154f85fb0a266e2a3c5913c2967e00348701b32411d6def31e5"},
+    {file = "chardet-5.2.0-py3-none-any.whl", hash = "sha256:e1cf59446890a00105fe7b7912492ea04b6e6f06d4b742b2c788469e34c82970"},
+    {file = "chardet-5.2.0.tar.gz", hash = "sha256:1b3b6ff479a8c414bc3fa2c0852995695c4a026dcd6d0633b2dd092ca39c1cf7"},
 ]
 
 [[package]]
 name = "charset-normalizer"
-version = "3.1.0"
+version = "3.2.0"
 description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
 category = "main"
 optional = false
 python-versions = ">=3.7.0"
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+    {file = "click-8.1.6.tar.gz", hash = "sha256:48ee849951919527a045bfe3bf7baa8a959c423134e1a5b98c05c20ba75a1cbd"},
 ]
 
 [package.dependencies]
@@ -274,25 +231,25 @@ files = [
 
 [[package]]
 name = "curies"
-version = "0.4.5"
+version = "0.6.0"
 description = "Idiomatic conversion between URIs and compact URIs (CURIEs)."
 category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "curies-0.4.5-py3-none-any.whl", hash = "sha256:73281f6616ec47c8d46d842def7a2021416c9ac10f580f9116125abf4bd2f943"},
-    {file = "curies-0.4.5.tar.gz", hash = "sha256:c01626183b520db1b4af6a1fd41ee6d02462fea4ce54d8c5a528e5782268589c"},
+    {file = "curies-0.6.0-py3-none-any.whl", hash = "sha256:0bf79e2176b2e44dee7fefadcd1f2d69e643fea124dc4a8d0dbf47ca5e1589f2"},
+    {file = "curies-0.6.0.tar.gz", hash = "sha256:a31533ae9caeec332f9bb33e21366ab7ec32437c5f347fc9d85aa77cc48093cc"},
 ]
 
 [package.dependencies]
+pydantic = "*"
 pytrie = "*"
 requests = "*"
 
 [package.extras]
-bioregistry = ["bioregistry (>=0.5.136)"]
-docs = ["sphinx", "sphinx-autodoc-typehints", "sphinx-automodapi", "sphinx-rtd-theme"]
-fastapi = ["fastapi", "httpx"]
-flask = ["flask"]
+docs = ["sphinx", "sphinx-automodapi", "sphinx-rtd-theme"]
+fastapi = ["defusedxml", "fastapi", "httpx", "python-multipart", "uvicorn"]
+flask = ["defusedxml", "flask"]
 pandas = ["pandas"]
 rdflib = ["rdflib"]
 tests = ["coverage", "pytest"]
@@ -311,45 +268,21 @@ files = [
 
 [[package]]
 name = "deprecated"
-version = "1.2.13"
+version = "1.2.14"
 description = "Python @deprecated decorator to deprecate old python classes, functions or methods."
 category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
-    {file = "Deprecated-1.2.13-py2.py3-none-any.whl", hash = "sha256:64756e3e14c8c5eea9795d93c524551432a0be75629f8f29e67ab8caf076c76d"},
-    {file = "Deprecated-1.2.13.tar.gz", hash = "sha256:43ac5335da90c31c24ba028af536a91d41d53f9e6901ddb021bcc572ce44e38d"},
+    {file = "Deprecated-1.2.14-py2.py3-none-any.whl", hash = "sha256:6fac8b097794a90302bdbb17b9b815e732d3c4720583ff1b198499d78470466c"},
+    {file = "Deprecated-1.2.14.tar.gz", hash = "sha256:e5323eb936458dccc2582dc6f9c322c852a775a27065ff2b0c4970b9d53d01b3"},
 ]
 
 [package.dependencies]
 wrapt = ">=1.10,<2"
 
 [package.extras]
-dev = ["PyTest", "PyTest (<5)", "PyTest-Cov", "PyTest-Cov (<2.6)", "bump2version (<1)", "configparser (<5)", "importlib-metadata (<3)", "importlib-resources (<4)", "sphinx (<2)", "sphinxcontrib-websupport (<2)", "tox", "zipp (<2)"]
-
-[[package]]
-name = "distlib"
-version = "0.3.6"
-description = "Distribution utilities"
-category = "dev"
-optional = false
-python-versions = "*"
-files = [
-    {file = "distlib-0.3.6-py2.py3-none-any.whl", hash = "sha256:f35c4b692542ca110de7ef0bea44d73981caeb34ca0b9b6b2e6d7790dda8f80e"},
-    {file = "distlib-0.3.6.tar.gz", hash = "sha256:14bad2d9b04d3a36127ac97f30b12a19268f211063d8f8ee4f47108896e11b46"},
-]
-
-[[package]]
-name = "docutils"
-version = "0.18.1"
-description = "Docutils -- Python Documentation Utilities"
-category = "dev"
-optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
-files = [
-    {file = "docutils-0.18.1-py2.py3-none-any.whl", hash = "sha256:23010f129180089fbcd3bc08cfefccb3b890b0050e1ca00c867036e9d161b98c"},
-    {file = "docutils-0.18.1.tar.gz", hash = "sha256:679987caf361a7539d76e584cbeddc311e3aee937877c87346f31debc63e9d06"},
-]
+dev = ["PyTest", "PyTest-Cov", "bump2version (<1)", "sphinx (<2)", "tox"]
 
 [[package]]
 name = "editorconfig"
@@ -377,35 +310,19 @@ files = [
 
 [[package]]
 name = "exceptiongroup"
-version = "1.1.1"
+version = "1.1.2"
 description = "Backport of PEP 654 (exception groups)"
 category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "exceptiongroup-1.1.1-py3-none-any.whl", hash = "sha256:232c37c63e4f682982c8b6459f33a8981039e5fb8756b2074364e5055c498c9e"},
-    {file = "exceptiongroup-1.1.1.tar.gz", hash = "sha256:d484c3090ba2889ae2928419117447a14daf3c1231d5e30d0aae34f354f01785"},
+    {file = "exceptiongroup-1.1.2-py3-none-any.whl", hash = "sha256:e346e69d186172ca7cf029c8c1d16235aa0e04035e5750b4b95039e65204328f"},
+    {file = "exceptiongroup-1.1.2.tar.gz", hash = "sha256:12c3e887d6485d16943a309616de20ae5582633e0a2eda17f4e10fd61c1e8af5"},
 ]
 
 [package.extras]
 test = ["pytest (>=6)"]
 
-[[package]]
-name = "filelock"
-version = "3.12.0"
-description = "A platform independent file lock."
-category = "dev"
-optional = false
-python-versions = ">=3.7"
-files = [
-    {file = "filelock-3.12.0-py3-none-any.whl", hash = "sha256:ad98852315c2ab702aeb628412cbf7e95b7ce8c3bf9565670b4eaecf1db370a9"},
-    {file = "filelock-3.12.0.tar.gz", hash = "sha256:fc03ae43288c013d2ea83c8597001b1129db351aad9c57fe2409327916b8e718"},
-]
-
-[package.extras]
-docs = ["furo (>=2023.3.27)", "sphinx (>=6.1.3)", "sphinx-autodoc-typehints (>=1.23,!=1.23.4)"]
-testing = ["covdefaults (>=2.3)", "coverage (>=7.2.3)", "diff-cover (>=7.5)", "pytest (>=7.3.1)", "pytest-cov (>=4)", "pytest-mock (>=3.10)", "pytest-timeout (>=2.1)"]
-
 [[package]]
 name = "fqdn"
 version = "1.5.1"
@@ -551,28 +468,16 @@ files = [
     {file = "idna-3.4.tar.gz", hash = "sha256:814f528e8dead7d329833b91c5faa87d60bf71824cd12a7530b5526063d02cb4"},
 ]
 
-[[package]]
-name = "imagesize"
-version = "1.4.1"
-description = "Getting image size from png/jpeg/jpeg2000/gif file"
-category = "dev"
-optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
-files = [
-    {file = "imagesize-1.4.1-py2.py3-none-any.whl", hash = "sha256:0d8d18d08f840c19d0ee7ca1fd82490fdc3729b7ac93f49870406ddde8ef8d8b"},
-    {file = "imagesize-1.4.1.tar.gz", hash = "sha256:69150444affb9cb0d5cc5a92b3676f0b2fb7cd9ae39e947a5e11a36b4497cd4a"},
-]
-
 [[package]]
 name = "importlib-metadata"
-version = "6.6.0"
+version = "6.8.0"
 description = "Read metadata from Python packages"
 category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "importlib_metadata-6.6.0-py3-none-any.whl", hash = "sha256:43dd286a2cd8995d5eaef7fee2066340423b818ed3fd70adf0bad5f1fac53fed"},
-    {file = "importlib_metadata-6.6.0.tar.gz", hash = "sha256:92501cdf9cc66ebd3e612f1b4f0c0765dfa42f0fa38ffb319b6bd84dd675d705"},
+    {file = "importlib_metadata-6.8.0-py3-none-any.whl", hash = "sha256:3ebb78df84a805d7698245025b975d9d67053cd94c79245ba4b3eb694abe68bb"},
+    {file = "importlib_metadata-6.8.0.tar.gz", hash = "sha256:dbace7892d8c0c4ac1ad096662232f831d4e64f4c4545bd53016a3e9d4654743"},
 ]
 
 [package.dependencies]
@@ -581,26 +486,26 @@ zipp = ">=0.5"
 [package.extras]
 docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
 perf = ["ipython"]
-testing = ["flake8 (<5)", "flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)"]
+testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)", "pytest-ruff"]
 
 [[package]]
 name = "importlib-resources"
-version = "5.12.0"
+version = "6.0.1"
 description = "Read resources from Python packages"
 category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "importlib_resources-5.12.0-py3-none-any.whl", hash = "sha256:7b1deeebbf351c7578e09bf2f63fa2ce8b5ffec296e0d349139d43cca061a81a"},
-    {file = "importlib_resources-5.12.0.tar.gz", hash = "sha256:4be82589bf5c1d7999aedf2a45159d10cb3ca4f19b2271f8792bc8e6da7b22f6"},
+    {file = "importlib_resources-6.0.1-py3-none-any.whl", hash = "sha256:134832a506243891221b88b4ae1213327eea96ceb4e407a00d790bb0626f45cf"},
+    {file = "importlib_resources-6.0.1.tar.gz", hash = "sha256:4359457e42708462b9626a04657c6208ad799ceb41e5c58c57ffa0e6a098a5d4"},
 ]
 
 [package.dependencies]
 zipp = {version = ">=3.1.0", markers = "python_version < \"3.10\""}
 
 [package.extras]
-docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
-testing = ["flake8 (<5)", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"]
+docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+testing = ["pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-ruff"]
 
 [[package]]
 name = "iniconfig"
@@ -664,13 +569,13 @@ i18n = ["Babel (>=2.7)"]
 
 [[package]]
 name = "jsbeautifier"
-version = "1.14.7"
+version = "1.14.9"
 description = "JavaScript unobfuscator and beautifier."
 category = "dev"
 optional = false
 python-versions = "*"
 files = [
-    {file = "jsbeautifier-1.14.7.tar.gz", hash = "sha256:77993254db1ff6f84eb6e1d75e3b6b72cba2ef20813a585b2d81e8e5e3c713c6"},
+    {file = "jsbeautifier-1.14.9.tar.gz", hash = "sha256:c738ebc36b47bd94e4ca6dd17a9004c3cc74edad582ca1d60e0e5d5945a63cb9"},
 ]
 
 [package.dependencies]
@@ -722,14 +627,13 @@ hbreader = "*"
 
 [[package]]
 name = "jsonpatch"
-version = "1.32"
+version = "1.33"
 description = "Apply JSON-Patches (RFC 6902)"
 category = "dev"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*"
 files = [
-    {file = "jsonpatch-1.32-py2.py3-none-any.whl", hash = "sha256:26ac385719ac9f54df8a2f0827bb8253aa3ea8ab7b3368457bcdb8c14595a397"},
-    {file = "jsonpatch-1.32.tar.gz", hash = "sha256:b6ddfe6c3db30d81a96aaeceb6baf916094ffa23d7dd5fa2c13e13f8b6e600c2"},
+    {file = "jsonpatch-1.33-py2.py3-none-any.whl", hash = "sha256:0ae28c0cd062bbd8b8ecc26d7d164fbbea9652a1a3693f3b956c1eae5145dade"},
 ]
 
 [package.dependencies]
@@ -755,39 +659,40 @@ six = "*"
 
 [[package]]
 name = "jsonpointer"
-version = "2.3"
+version = "2.4"
 description = "Identify specific nodes in a JSON document (RFC 6901)"
 category = "dev"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*"
 files = [
-    {file = "jsonpointer-2.3-py2.py3-none-any.whl", hash = "sha256:51801e558539b4e9cd268638c078c6c5746c9ac96bc38152d443400e4f3793e9"},
-    {file = "jsonpointer-2.3.tar.gz", hash = "sha256:97cba51526c829282218feb99dab1b1e6bdf8efd1c43dc9d57be093c0d69c99a"},
+    {file = "jsonpointer-2.4-py2.py3-none-any.whl", hash = "sha256:15d51bba20eea3165644553647711d150376234112651b4f1811022aecad7d7a"},
 ]
 
 [[package]]
 name = "jsonschema"
-version = "4.17.3"
+version = "4.19.0"
 description = "An implementation of JSON Schema validation for Python"
 category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "jsonschema-4.17.3-py3-none-any.whl", hash = "sha256:a870ad254da1a8ca84b6a2905cac29d265f805acc57af304784962a2aa6508f6"},
-    {file = "jsonschema-4.17.3.tar.gz", hash = "sha256:0f864437ab8b6076ba6707453ef8f98a6a0d512a80e93f8abdb676f737ecb60d"},
+    {file = "jsonschema-4.19.0-py3-none-any.whl", hash = "sha256:043dc26a3845ff09d20e4420d6012a9c91c9aa8999fa184e7efcfeccb41e32cb"},
+    {file = "jsonschema-4.19.0.tar.gz", hash = "sha256:6e1e7569ac13be8139b2dd2c21a55d350066ee3f80df06c608b398cdc6f30e8f"},
 ]
 
 [package.dependencies]
-attrs = ">=17.4.0"
+attrs = ">=22.2.0"
 fqdn = {version = "*", optional = true, markers = "extra == \"format\""}
 idna = {version = "*", optional = true, markers = "extra == \"format\""}
 importlib-resources = {version = ">=1.4.0", markers = "python_version < \"3.9\""}
 isoduration = {version = "*", optional = true, markers = "extra == \"format\""}
 jsonpointer = {version = ">1.13", optional = true, markers = "extra == \"format\""}
+jsonschema-specifications = ">=2023.03.6"
 pkgutil-resolve-name = {version = ">=1.3.10", markers = "python_version < \"3.9\""}
-pyrsistent = ">=0.14.0,<0.17.0 || >0.17.0,<0.17.1 || >0.17.1,<0.17.2 || >0.17.2"
+referencing = ">=0.28.4"
 rfc3339-validator = {version = "*", optional = true, markers = "extra == \"format\""}
 rfc3987 = {version = "*", optional = true, markers = "extra == \"format\""}
+rpds-py = ">=0.7.1"
 uri-template = {version = "*", optional = true, markers = "extra == \"format\""}
 webcolors = {version = ">=1.11", optional = true, markers = "extra == \"format\""}
 
@@ -795,33 +700,50 @@ webcolors = {version = ">=1.11", optional = true, markers = "extra == \"format\"
 format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3987", "uri-template", "webcolors (>=1.11)"]
 format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"]
 
+[[package]]
+name = "jsonschema-specifications"
+version = "2023.7.1"
+description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry"
+category = "main"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "jsonschema_specifications-2023.7.1-py3-none-any.whl", hash = "sha256:05adf340b659828a004220a9613be00fa3f223f2b82002e273dee62fd50524b1"},
+    {file = "jsonschema_specifications-2023.7.1.tar.gz", hash = "sha256:c91a50404e88a1f6ba40636778e2ee08f6e24c5613fe4c53ac24578a5a7f72bb"},
+]
+
+[package.dependencies]
+importlib-resources = {version = ">=1.4.0", markers = "python_version < \"3.9\""}
+referencing = ">=0.28.0"
+
 [[package]]
 name = "lark"
-version = "1.1.5"
+version = "1.1.7"
 description = "a modern parsing library"
 category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=3.6"
 files = [
-    {file = "lark-1.1.5-py3-none-any.whl", hash = "sha256:8476f9903e93fbde4f6c327f74d79e9b4bd0ed9294c5dfa3164ab8c581b5de2a"},
-    {file = "lark-1.1.5.tar.gz", hash = "sha256:4b534eae1f9af5b4ea000bea95776350befe1981658eea3820a01c37e504bb4d"},
+    {file = "lark-1.1.7-py3-none-any.whl", hash = "sha256:9e5dc5bbf93fa1840083707285262514a0ef8a6613874af7ea1cec60468d6e92"},
+    {file = "lark-1.1.7.tar.gz", hash = "sha256:be7437bf1f37ab08b355f29ff2571d77d777113d0a8c4352b0c513dced6c5a1e"},
 ]
 
 [package.extras]
 atomic-cache = ["atomicwrites"]
+interegular = ["interegular (>=0.3.1,<0.4.0)"]
 nearley = ["js2py"]
 regex = ["regex"]
 
 [[package]]
 name = "linkml"
-version = "1.5.2"
+version = "1.5.6"
 description = "Linked Open Data Modeling Language"
 category = "dev"
 optional = false
 python-versions = ">=3.7.6,<4.0.0"
 files = [
-    {file = "linkml-1.5.2-py3-none-any.whl", hash = "sha256:530d53a67c4ea327d4a7a960c884b37ebbf4d8c9a139a4431b12556bf3966d89"},
-    {file = "linkml-1.5.2.tar.gz", hash = "sha256:a8ab735d6c5fbbf9ab245894d773ebf58ec9a2ae6ccd878b2fc19633543edc07"},
+    {file = "linkml-1.5.6-py3-none-any.whl", hash = "sha256:8036d9ead98d0bf61017e5a2db32ca5b752ab32e338c796c4780118f37293d44"},
+    {file = "linkml-1.5.6.tar.gz", hash = "sha256:54b34ad376c3146eb714e961118ac2a02720ac315d8ab76ca802e5dc479b25fb"},
 ]
 
 [package.dependencies]
@@ -834,12 +756,11 @@ jinja2 = ">=3.1.0"
 jsonasobj2 = ">=1.0.3,<2.0.0"
 jsonschema = {version = ">=4.0.0", extras = ["format"]}
 linkml-dataops = "*"
-linkml-runtime = ">=1.5.0"
-myst-parser = "*"
+linkml-runtime = ">=1.5.4"
 openpyxl = "*"
 parse = "*"
 prefixcommons = ">=0.1.7"
-prefixmaps = ">=0.1.3,<0.2.0"
+prefixmaps = ">=0.1.3"
 pydantic = "*"
 pyjsg = ">=0.11.6"
 pyshex = ">=0.7.20"
@@ -848,15 +769,9 @@ python-dateutil = "*"
 pyyaml = "*"
 rdflib = ">=6.0.0"
 requests = ">=2.22"
-sphinx-click = "*"
-sphinx-rtd-theme = "*"
 sqlalchemy = ">=1.4.31"
-tox = ">=3.25.1,<4.0.0"
 watchdog = ">=0.9.0"
 
-[package.extras]
-docs = ["furo[docs] (>=2022.9.29,<2023.0.0)", "sphinx", "sphinxcontrib-mermaid[docs] (>=0.7.1,<0.8.0)"]
-
 [[package]]
 name = "linkml-dataops"
 version = "0.1.0"
@@ -878,163 +793,108 @@ linkml-runtime = ">=1.1.6"
 
 [[package]]
 name = "linkml-runtime"
-version = "1.5.2"
+version = "1.5.6"
 description = "Runtime environment for LinkML, the Linked open data modeling language"
 category = "main"
 optional = false
 python-versions = ">=3.7.6,<4.0.0"
 files = [
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 ]
 
 [[package]]
@@ -1051,14 +911,14 @@ files = [
 
 [[package]]
 name = "mkdocs"
-version = "1.4.3"
+version = "1.5.2"
 description = "Project documentation with Markdown."
 category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "mkdocs-1.4.3-py3-none-any.whl", hash = "sha256:6ee46d309bda331aac915cd24aab882c179a933bd9e77b80ce7d2eaaa3f689dd"},
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+    {file = "mkdocs-1.5.2-py3-none-any.whl", hash = "sha256:60a62538519c2e96fe8426654a67ee177350451616118a41596ae7c876bb7eac"},
+    {file = "mkdocs-1.5.2.tar.gz", hash = "sha256:70d0da09c26cff288852471be03c23f0f521fc15cf16ac89c7a3bfb9ae8d24f9"},
 ]
 
 [package.dependencies]
@@ -1067,16 +927,19 @@ colorama = {version = ">=0.4", markers = "platform_system == \"Windows\""}
 ghp-import = ">=1.0"
 importlib-metadata = {version = ">=4.3", markers = "python_version < \"3.10\""}
 jinja2 = ">=2.11.1"
-markdown = ">=3.2.1,<3.4"
+markdown = ">=3.2.1"
+markupsafe = ">=2.0.1"
 mergedeep = ">=1.3.4"
 packaging = ">=20.5"
+pathspec = ">=0.11.1"
+platformdirs = ">=2.2.0"
 pyyaml = ">=5.1"
 pyyaml-env-tag = ">=0.1"
 watchdog = ">=2.0"
 
 [package.extras]
 i18n = ["babel (>=2.9.0)"]
-min-versions = ["babel (==2.9.0)", "click (==7.0)", "colorama (==0.4)", "ghp-import (==1.0)", "importlib-metadata (==4.3)", "jinja2 (==2.11.1)", "markdown (==3.2.1)", "markupsafe (==2.0.1)", "mergedeep (==1.3.4)", "packaging (==20.5)", "pyyaml (==5.1)", "pyyaml-env-tag (==0.1)", "typing-extensions (==3.10)", "watchdog (==2.0)"]
+min-versions = ["babel (==2.9.0)", "click (==7.0)", "colorama (==0.4)", "ghp-import (==1.0)", "importlib-metadata (==4.3)", "jinja2 (==2.11.1)", "markdown (==3.2.1)", "markupsafe (==2.0.1)", "mergedeep (==1.3.4)", "packaging (==20.5)", "pathspec (==0.11.1)", "platformdirs (==2.2.0)", "pyyaml (==5.1)", "pyyaml-env-tag (==0.1)", "typing-extensions (==3.10)", "watchdog (==2.0)"]
 
 [[package]]
 name = "mkdocs-material"
@@ -1133,51 +996,6 @@ pyyaml = "*"
 requests = "*"
 setuptools = ">=18.5"
 
-[[package]]
-name = "more-click"
-version = "0.1.2"
-description = "More click."
-category = "main"
-optional = false
-python-versions = ">=3.7"
-files = [
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-]
-
-[package.dependencies]
-click = "*"
-
-[package.extras]
-tests = ["coverage", "pytest"]
-
-[[package]]
-name = "myst-parser"
-version = "1.0.0"
-description = "An extended [CommonMark](https://spec.commonmark.org/) compliant parser,"
-category = "dev"
-optional = false
-python-versions = ">=3.7"
-files = [
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-
-[package.dependencies]
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-mdit-py-plugins = ">=0.3.4,<0.4.0"
-pyyaml = "*"
-sphinx = ">=5,<7"
-
-[package.extras]
-code-style = ["pre-commit (>=3.0,<4.0)"]
-linkify = ["linkify-it-py (>=1.0,<2.0)"]
-rtd = ["ipython", "pydata-sphinx-theme (==v0.13.0rc4)", "sphinx-autodoc2 (>=0.4.2,<0.5.0)", "sphinx-book-theme (==1.0.0rc2)", "sphinx-copybutton", "sphinx-design2", "sphinx-pyscript", "sphinx-tippy (>=0.3.1)", "sphinx-togglebutton", "sphinxext-opengraph (>=0.7.5,<0.8.0)", "sphinxext-rediraffe (>=0.2.7,<0.3.0)"]
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-testing-docutils = ["pygments", "pytest (>=7,<8)", "pytest-param-files (>=0.3.4,<0.4.0)"]
-
 [[package]]
 name = "openpyxl"
 version = "3.1.2"
@@ -1207,13 +1025,26 @@ files = [
 
 [[package]]
 name = "parse"
-version = "1.19.0"
+version = "1.19.1"
 description = "parse() is the opposite of format()"
 category = "dev"
 optional = false
 python-versions = "*"
 files = [
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+    {file = "parse-1.19.1.tar.gz", hash = "sha256:cc3a47236ff05da377617ddefa867b7ba983819c664e1afe46249e5b469be464"},
+]
+
+[[package]]
+name = "pathspec"
+version = "0.11.2"
+description = "Utility library for gitignore style pattern matching of file paths."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+files = [
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 ]
 
 [[package]]
@@ -1230,30 +1061,30 @@ files = [
 
 [[package]]
 name = "platformdirs"
-version = "3.5.0"
+version = "3.10.0"
 description = "A small Python package for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
 category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
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+    {file = "platformdirs-3.10.0.tar.gz", hash = "sha256:b45696dab2d7cc691a3226759c0d3b00c47c8b6e293d96f6436f733303f77f6d"},
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 [package.extras]
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-test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.3.1)", "pytest-cov (>=4)", "pytest-mock (>=3.10)"]
+docs = ["furo (>=2023.7.26)", "proselint (>=0.13)", "sphinx (>=7.1.1)", "sphinx-autodoc-typehints (>=1.24)"]
+test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.4)", "pytest-cov (>=4.1)", "pytest-mock (>=3.11.1)"]
 
 [[package]]
 name = "pluggy"
-version = "1.0.0"
+version = "1.2.0"
 description = "plugin and hook calling mechanisms for python"
 category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 files = [
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 ]
 
 [package.extras]
@@ -1314,80 +1145,149 @@ docs = ["Sphinx[docs] (>=5.3.0,<6.0.0)", "myst-parser[docs] (>=0.18.1,<0.19.0)",
 refresh = ["bioregistry[refresh] (>=0.8.0,<0.9.0)", "rdflib[refresh] (>=6.2.0,<7.0.0)", "requests[refresh] (>=2.28.1,<3.0.0)"]
 
 [[package]]
-name = "py"
-version = "1.11.0"
-description = "library with cross-python path, ini-parsing, io, code, log facilities"
-category = "dev"
+name = "pydantic"
+version = "2.1.1"
+description = "Data validation using Python type hints"
+category = "main"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.7"
 files = [
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 ]
 
+[package.dependencies]
+annotated-types = ">=0.4.0"
+pydantic-core = "2.4.0"
+typing-extensions = ">=4.6.1"
+
+[package.extras]
+email = ["email-validator (>=2.0.0)"]
+
 [[package]]
-name = "pydantic"
-version = "1.10.7"
-description = "Data validation and settings management using python type hints"
+name = "pydantic-core"
+version = "2.4.0"
+description = ""
 category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
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 [package.dependencies]
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-
-[package.extras]
-dotenv = ["python-dotenv (>=0.10.4)"]
-email = ["email-validator (>=1.0.3)"]
+typing-extensions = ">=4.6.0,<4.7.0 || >4.7.0"
 
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 name = "pygments"
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+version = "2.16.1"
 description = "Pygments is a syntax highlighting package written in Python."
 category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
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 [[package]]
 name = "pymdown-extensions"
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 description = "Extension pack for Python Markdown."
 category = "dev"
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 [package.dependencies]
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 python-versions = ">=3.6.8"
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 [package.extras]
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 [[package]]
 name = "pyshex"
 version = "0.8.1"
@@ -1520,41 +1383,16 @@ pyjsg = ">=0.11.10"
 rdflib-shim = "*"
 shexjsg = ">=0.8.1"
 
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-rdf = ["rdflib"]
-tests = ["coverage", "pytest", "requests-file"]
-xml = ["lxml"]
-
 [[package]]
 name = "pytest"
-version = "7.3.1"
+version = "7.4.0"
 description = "pytest: simple powerful testing with Python"
 category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
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 ]
 
 [package.dependencies]
@@ -1566,7 +1404,7 @@ pluggy = ">=0.12,<2.0"
 tomli = {version = ">=1.0.0", markers = "python_version < \"3.11\""}
 
 [package.extras]
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 [[package]]
@@ -1741,16 +1567,32 @@ files = [
 rdflib = ">=5.0.0"
 rdflib-jsonld = "0.6.1"
 
+[[package]]
+name = "referencing"
+version = "0.30.2"
+description = "JSON Referencing + Python"
+category = "main"
+optional = false
+python-versions = ">=3.8"
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+
+[package.dependencies]
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+rpds-py = ">=0.7.0"
+
 [[package]]
 name = "requests"
-version = "2.30.0"
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 description = "Python HTTP for Humans."
 category = "main"
 optional = false
 python-versions = ">=3.7"
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 [package.dependencies]
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 ]
 
+[[package]]
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 pandas = ["pandas (>=1.3.5)"]
 
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 postgresql-psycopg = ["psycopg (>=3.0.7)"]
 postgresql-psycopg2binary = ["psycopg2-binary"]
 postgresql-psycopg2cffi = ["psycopg2cffi"]
+postgresql-psycopgbinary = ["psycopg[binary] (>=3.0.7)"]
 pymysql = ["pymysql"]
 sqlcipher = ["sqlcipher3-binary"]
 
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 [package.extras]
-dev = ["flake8 (<4.0.0)", "flake8-annotations", "flake8-bugbear", "flake8-commas", "flake8-comprehensions", "flake8-continuation", "flake8-datetimez", "flake8-docstrings", "flake8-import-order", "flake8-literal", "flake8-noqa", "flake8-requirements", "flake8-type-annotations", "flake8-use-fstring", "mypy", "pep8-naming"]
+dev = ["flake8", "flake8-annotations", "flake8-bandit", "flake8-bugbear", "flake8-commas", "flake8-comprehensions", "flake8-continuation", "flake8-datetimez", "flake8-docstrings", "flake8-import-order", "flake8-literal", "flake8-modern-annotations", "flake8-noqa", "flake8-pyproject", "flake8-requirements", "flake8-typechecking-import", "flake8-use-fstring", "mypy", "pep8-naming", "types-PyYAML"]
 
 [[package]]
 name = "urllib3"
-version = "2.0.2"
+version = "2.0.4"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
 category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "urllib3-2.0.2-py3-none-any.whl", hash = "sha256:d055c2f9d38dc53c808f6fdc8eab7360b6fdbbde02340ed25cfbcd817c62469e"},
-    {file = "urllib3-2.0.2.tar.gz", hash = "sha256:61717a1095d7e155cdb737ac7bb2f4324a858a1e2e6466f6d03ff630ca68d3cc"},
+    {file = "urllib3-2.0.4-py3-none-any.whl", hash = "sha256:de7df1803967d2c2a98e4b11bb7d6bd9210474c46e8a0401514e3a42a75ebde4"},
+    {file = "urllib3-2.0.4.tar.gz", hash = "sha256:8d22f86aae8ef5e410d4f539fde9ce6b2113a001bb4d189e0aed70642d602b11"},
 ]
 
 [package.extras]
@@ -2338,27 +2047,6 @@ secure = ["certifi", "cryptography (>=1.9)", "idna (>=2.0.0)", "pyopenssl (>=17.
 socks = ["pysocks (>=1.5.6,!=1.5.7,<2.0)"]
 zstd = ["zstandard (>=0.18.0)"]
 
-[[package]]
-name = "virtualenv"
-version = "20.23.0"
-description = "Virtual Python Environment builder"
-category = "dev"
-optional = false
-python-versions = ">=3.7"
-files = [
-    {file = "virtualenv-20.23.0-py3-none-any.whl", hash = "sha256:6abec7670e5802a528357fdc75b26b9f57d5d92f29c5462ba0fbe45feacc685e"},
-    {file = "virtualenv-20.23.0.tar.gz", hash = "sha256:a85caa554ced0c0afbd0d638e7e2d7b5f92d23478d05d17a76daeac8f279f924"},
-]
-
-[package.dependencies]
-distlib = ">=0.3.6,<1"
-filelock = ">=3.11,<4"
-platformdirs = ">=3.2,<4"
-
-[package.extras]
-docs = ["furo (>=2023.3.27)", "proselint (>=0.13)", "sphinx (>=6.1.3)", "sphinx-argparse (>=0.4)", "sphinxcontrib-towncrier (>=0.2.1a0)", "towncrier (>=22.12)"]
-test = ["covdefaults (>=2.3)", "coverage (>=7.2.3)", "coverage-enable-subprocess (>=1)", "flaky (>=3.7)", "packaging (>=23.1)", "pytest (>=7.3.1)", "pytest-env (>=0.8.1)", "pytest-freezegun (>=0.4.2)", "pytest-mock (>=3.10)", "pytest-randomly (>=3.12)", "pytest-timeout (>=2.1)", "setuptools (>=67.7.1)", "time-machine (>=2.9)"]
-
 [[package]]
 name = "watchdog"
 version = "3.0.0"
@@ -2502,19 +2190,19 @@ files = [
 
 [[package]]
 name = "zipp"
-version = "3.15.0"
+version = "3.16.2"
 description = "Backport of pathlib-compatible object wrapper for zip files"
 category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "zipp-3.15.0-py3-none-any.whl", hash = "sha256:48904fc76a60e542af151aded95726c1a5c34ed43ab4134b597665c86d7ad556"},
-    {file = "zipp-3.15.0.tar.gz", hash = "sha256:112929ad649da941c23de50f356a2b5570c954b65150642bccdd66bf194d224b"},
+    {file = "zipp-3.16.2-py3-none-any.whl", hash = "sha256:679e51dd4403591b2d6838a48de3d283f3d188412a9782faadf845f298736ba0"},
+    {file = "zipp-3.16.2.tar.gz", hash = "sha256:ebc15946aa78bd63458992fc81ec3b6f7b1e92d51c35e6de1c3804e73b799147"},
 ]
 
 [package.extras]
-docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
-testing = ["big-O", "flake8 (<5)", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"]
+docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy (>=0.9.1)", "pytest-ruff"]
 
 [extras]
 docs = []
@@ -2522,4 +2210,4 @@ docs = []
 [metadata]
 lock-version = "2.0"
 python-versions = "^3.8"
-content-hash = "63b1dd8a2974b5757aecee23aa2fdec88bb9829c0a2de170f45b4f4ffbf061b2"
+content-hash = "20dcb5b5b631845d6e5368f3a6a78585491baa1b788833b11cef341084c150dc"
diff --git a/pyproject.toml b/pyproject.toml
index 44de2046..0ee136e4 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -14,7 +14,8 @@ readme = "README.md"
 python = "^3.8"
 linkml-runtime = ">=1.1.24"
 lark = ">=1.1.2"
-bioregistry = ">=0.6.0"
+prefixmaps = "^0.1.5"
+curies = "^0.6.0"
 
 [tool.poetry.dev-dependencies]
 linkml = ">=1.5.2"
diff --git a/src/kgcl_schema/grammar/parser.py b/src/kgcl_schema/grammar/parser.py
index 73accaee..c8b7bdcf 100644
--- a/src/kgcl_schema/grammar/parser.py
+++ b/src/kgcl_schema/grammar/parser.py
@@ -1,12 +1,13 @@
 """KGCL parser."""
 import logging
-import re
 import sys
+from functools import lru_cache
 from pathlib import Path
 from typing import List
 
 import click
-from bioregistry import parse_iri, get_preferred_prefix, curie_to_str
+from prefixmaps.io.parser import load_multi_context
+from curies import Converter
 from kgcl_schema.datamodel.kgcl import (
     Change,
     ClassCreation,
@@ -38,6 +39,12 @@
 from lark import Lark, Token
 
 
+@lru_cache()
+def get_curie_converter() -> Converter:
+    context = load_multi_context(["obo", "bioregistry.upper", "linked_data"])
+    extended_prefix_map = context.as_extended_prefix_map()
+    return Converter.from_extended_prefix_map(extended_prefix_map)
+
 def id_generator():
     """Return a new ID for KGCL change operations."""
     id = 0
@@ -626,11 +633,9 @@ def get_entity_representation(entity):
 
 
 def contract_uri(uri_or_curie: str):
+    converter = get_curie_converter()
     if uri_or_curie.startswith("http://") or uri_or_curie.startswith("https://"):
-        pref, i = parse_iri(uri_or_curie)
-        pref = get_preferred_prefix(pref)
-        curie = curie_to_str(pref, i)
-        return curie
+        return converter.compress(uri_or_curie)
     else:
         return uri_or_curie