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Merge develop into main for new release 0.12.14. #617

Merged
merged 11 commits into from
Nov 10, 2023
Merged

Merge develop into main for new release 0.12.14. #617

merged 11 commits into from
Nov 10, 2023

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stephanmg
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stephanmg and others added 11 commits November 6, 2023 15:07
* Create ploty versions of selected matplotlib visualizations

* update r install instructions

* fix pandas float deprecation warnings

* fixarray ndim > 0 float extraction deprecationwarning

---------

Co-authored-by: Stephan Grein <[email protected]>
#355)

* add the functionality to evaluate the model using boundry values of parameter

* fix flake8 issues

* fix additional flake8 issues

* add test case

* flake8 fixes

* flake8 fixes

* flake8 fixes

* flake8 fixes

* flake8 fixes

* black fixes

* Update test_external.py

Use correct comparison operator.

---------

Co-authored-by: Yannik Schälte <[email protected]>
Co-authored-by: Stephan Grein <[email protected]>
Co-authored-by: Stephan Grein <[email protected]>
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codecov-commenter commented Nov 10, 2023

Codecov Report

Merging #617 (eed7986) into main (558d5e4) will decrease coverage by 2.44%.
The diff coverage is 91.63%.

❗ Your organization needs to install the Codecov GitHub app to enable full functionality.

@@            Coverage Diff             @@
##             main     #617      +/-   ##
==========================================
- Coverage   84.08%   81.65%   -2.44%     
==========================================
  Files         140      141       +1     
  Lines        8193     8535     +342     
==========================================
+ Hits         6889     6969      +80     
- Misses       1304     1566     +262     
Files Coverage Δ
pyabc/external/utils.py 100.00% <100.00%> (ø)
pyabc/transition/jump.py 92.30% <100.00%> (ø)
pyabc/visualization/__init__.py 100.00% <100.00%> (ø)
pyabc/visualization/credible.py 95.73% <98.41%> (-0.06%) ⬇️
pyabc/visualization/util.py 94.33% <92.30%> (-0.67%) ⬇️
pyabc/visualization/effective_sample_size.py 92.72% <93.93%> (-1.87%) ⬇️
pyabc/visualization/epsilon.py 91.48% <91.66%> (-2.27%) ⬇️
pyabc/visualization/sample.py 97.24% <98.13%> (-0.15%) ⬇️
pyabc/visualization/kde.py 97.20% <96.80%> (-0.34%) ⬇️
pyabc/visualization/model_probabilities.py 90.00% <82.35%> (-10.00%) ⬇️
... and 2 more

... and 6 files with indirect coverage changes

@stephanmg stephanmg merged commit 16bdee9 into main Nov 10, 2023
11 checks passed
stephanmg added a commit that referenced this pull request Nov 10, 2023
* Fix assets for pyabc visserver.

* Update R.

* Fix for logo path in abc-server-dash

* Preparing release notes for next patch release.

* Updating about.rst.

* Updating changelog.

* Create plotly versions of selected matplotlib visualizations (#610)

* Create ploty versions of selected matplotlib visualizations

* update r install instructions

* fix pandas float deprecation warnings

* fixarray ndim > 0 float extraction deprecationwarning

---------

Co-authored-by: Stephan Grein <[email protected]>

* add the functionality to evaluate the model using boundry values of p… (#355)

* add the functionality to evaluate the model using boundry values of parameter

* fix flake8 issues

* fix additional flake8 issues

* add test case

* flake8 fixes

* flake8 fixes

* flake8 fixes

* flake8 fixes

* flake8 fixes

* black fixes

* Update test_external.py

Use correct comparison operator.

---------

Co-authored-by: Yannik Schälte <[email protected]>
Co-authored-by: Stephan Grein <[email protected]>
Co-authored-by: Stephan Grein <[email protected]>

---------

Co-authored-by: Yannik Schälte <[email protected]>
Co-authored-by: Emad Alamoudi <[email protected]>
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5 participants