From 9f00c099dbcd1e5e287bc6c35cb028dfac4118dc Mon Sep 17 00:00:00 2001 From: Lori Cooper Date: Wed, 27 Sep 2023 17:04:49 -0500 Subject: [PATCH] Edit RELEASE.txt for consistency. (#3610) --- release_docs/RELEASE.txt | 389 +++++++++++++++++++++------------------ 1 file changed, 205 insertions(+), 184 deletions(-) diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt index 02e0c731b45..b237ad13640 100644 --- a/release_docs/RELEASE.txt +++ b/release_docs/RELEASE.txt @@ -35,11 +35,11 @@ CONTENTS ======== - New Features -- Support for new platforms and languages -- Bug Fixes since HDF5-1.12.2 +- Support for New Platforms and Languages +- Bug Fixes Since HDF5-1.12.2 - Platforms Tested - Known Problems -- CMake vs. Autotools installations +- CMake vs. Autotools Installations New Features @@ -47,13 +47,13 @@ New Features Configuration: ------------- - - The minimum required version of Autoconf has been bumped to 2.71 + - Bumped the minimum required version of Autoconf to 2.71. This fixes a problem with the Intel oneAPI Fortran compiler's -loopopt option being interpreted as a linker option (see bug fixes, below). This should only affect building the library from a maintenance branch - using the Autotools, when autogen.sh is used to generate the Autotools + using Autotools, when autogen.sh is used to generate the Autotools files. It does NOT affect the binaries or building from the source tarballs @@ -63,13 +63,12 @@ New Features CMake supports two main files, CMakePresets.json and CMakeUserPresets.json, that allow users to specify common configure options and share them with others. - HDF added a CMakePresets.json file of a typical configuration and support - file, config/cmake-presets/hidden-presets.json. - Also added a section to INSTALL_CMake.txt with very basic explanation of the - process to use CMakePresets. + This release added a CMakePresets.json file of a typical configuration and support + file, config/cmake-presets/hidden-presets.json. It also added a section to + INSTALL_CMake.txt with very basic explanation of the process to use CMakePresets. - Enabled instrumentation of the library by default in CMake for parallel - debug builds + debug builds. HDF5 can be configured to instrument portions of the parallel library to aid in debugging. Autotools builds of HDF5 turn this capability on by @@ -99,37 +98,37 @@ New Features See the CMakeFilters.cmake and config/cmake/cacheinit.cmake files for usage. - - Add new CMake configuration variable HDF5_USE_GNU_DIRS + - Added new CMake configuration variable HDF5_USE_GNU_DIRS. HDF5_USE_GNU_DIRS (default OFF) selects the use of GNU Coding Standard install - directory variables by including the CMake module, GNUInstallDirs(see CMake + directory variables by including the CMake module, GNUInstallDirs (see CMake documentation for details). The HDF_DIR_PATHS macro in the HDFMacros.cmake file - sets various PATH variables for use during the build, test and install processes. + sets various PATH variables for use during the build, test, and install processes. By default, the historical settings for these variables will be used. - - Correct the usage of CMAKE_Fortran_MODULE_DIRECTORY and where to + - Corrected the usage of CMAKE_Fortran_MODULE_DIRECTORY and where to install Fortran mod files. The Fortran modules files, ending in .mod are files describing a Fortran 90 (and above) module API and ABI. These are not like C header files describing an API, they are compiler dependent and - arch dependent, and not easily readable by a human being. They are + architecture dependent, and not easily readable by a human being. They are nevertheless searched for in the includes directories by gfortran (in directories specified with -I). - + Autotools configure uses the -fmoddir option to specify the folder. CMake will use "mod" folder by default unless overridden by the CMake - variable; HDF5_INSTALL_MODULE_DIR. + variable HDF5_INSTALL_MODULE_DIR. Library: -------- - - Change the error handling for a not found path in the find plugin process. + - Changed the error handling for a not found path in the find plugin process. - While attempting to load a plugin the HDF5 library will fail if one of the + While attempting to load a plugin, the HDF5 library will fail if one of the directories in the plugin paths does not exist, even if there are more paths - to check. Instead of exiting the function with an error, just logged the error - and continue processing the list of paths to check. + to check. Instead of exiting the function with an error, it now just logs the error + and continues processing the list of paths to check. Parallel Library: @@ -149,17 +148,18 @@ New Features Java Library: ------------- - - Fixed memory leaks that could occur when reading a dataset from a - malformed file + - Fixed memory leaks that can occur when reading a dataset from a + malformed file. When attempting to read layout, pline, and efl information for a dataset, memory leaks could occur if attempting to read pline/efl - information threw an error, which is due to the memory that was - allocated for pline and efl not being properly cleaned up on error. + information throws an error. The leaks would occur because the memory + that was allocated for pline and efl not being properly cleaned up by + error handling. Fixes Github issue #2602 - - HDF5GroupInfo class has been deprecated. + - Deprecated the HDF5GroupInfo class. This class assumes that an object can contain four values which uniquely identify an object among those HDF5 files which are open. This is no longer valid in future @@ -167,25 +167,26 @@ New Features - Added version of H5Rget_name to return the name as a Java string. - Other functions that get_name process the get_size then get the name - within the JNI implementation. Now H5Rget_name has a H5Rget_name_string. + Other functions that use the "get_name" process use "get_size" before + retrieving the name. This happens in the JNI wrapper implementation of + the function. Now H5Rget_name has a H5Rget_name_string which returns the + string like similar functions. - Added reference support to H5A and H5D read write vlen JNI functions. - Added the implementation to handle VL references as an Array of Lists + This release implemented a change to handle VL references as an Array of Lists of byte arrays. The JNI wrappers translate the Array of Lists to/from the hvl_t vlen structures. The wrappers use the specified datatype arguments for the - List type translation, it is expected that the Java type is correct. + List type translation; it is expected that the Java type is correct. Fixes Jira issue HDFFV-11318 - - H5A and H5D read write vlen JNI functions were incorrect. + - Corrected H5A and H5D read write vlen JNI functions. - Corrected the vlen function implementations for the basic primitive types. - The VLStrings functions now correctly use the implementation that had been - the VL functions. (VLStrings functions did not have an implementation.) + The VLStrings functions now correctly use the implementation previously used + by the VL functions. (VLStrings functions did not have an implementation.) The new VL functions implementation now expect an Array of Lists between Java and the JNI wrapper. @@ -195,16 +196,17 @@ New Features Fixes Jira issue HDFFV-11310 - - H5A and H5D read write JNI functions had flawed vlen datatype check. + - Corrected H5A and H5D read write JNI functions with a flawed vlen datatype check. - Adapted tools function for JNI utils file. This reduced multiple calls + Adapted tools function for JNI utils file. This reduces multiple calls to a single check and variable. The variable can then be used to call - the H5Treclaim function. Adjusted existing test and added new test. + the H5Treclaim function. This release also adjusts the existing test and adds + a new test. Tools: ------ - - 1.10 References in containers were not displayed properly by h5dump. + - Fixed an issue with h5dump not properly displaying 1.10 References in containers. Ported 1.10 tools display function to provide ability to inspect and display 1.10 reference data. @@ -227,8 +229,8 @@ New Features Documentation: -------------- - - Doxygen User Guide documentation is available when configured and generated. - The resulting documentation files will be in the share/html subdirectory + - Doxygen User Guide documentation can be configured and generated. The + resulting documentation files will be in the share/html subdirectory of the HDF5 install directory. @@ -241,7 +243,7 @@ Bug Fixes since HDF5-1.12.2 release =================================== Library ------- - - Fixed CVE-2018-11202 + - Fixed memory leak during shut down. A malformed file could result in chunk index memory leaks. Under most conditions (i.e., when the --enable-using-memchecker option is NOT @@ -255,7 +257,9 @@ Bug Fixes since HDF5-1.12.2 release The chunk index resources are now correctly cleaned up when reading misparsed files and valgrind confirms no memory leaks. - - Fixed an assertion in a previous fix for CVE-2016-4332 + Fixes CVE-2018-11202 + + - Fixed an assertion in a previous fix for CVE-2016-4332. An assert could fail when processing corrupt files that have invalid shared message flags (as in CVE-2016-4332). @@ -268,7 +272,7 @@ Bug Fixes since HDF5-1.12.2 release Fixes CVE-2016-4332 and HDFFV-9950 (confirmed via the cve_hdf5 repo) - Fixed a file space allocation bug in the parallel library for chunked - datasets + datasets. With the addition of support for incremental file space allocation for chunked datasets with filters applied to them that are created/accessed @@ -279,7 +283,7 @@ Bug Fixes since HDF5-1.12.2 release cause parallel writes to those datasets to place incorrect data in the file. - Fixed an assertion failure in Parallel HDF5 when a file can't be created - due to an invalid library version bounds setting + due to an invalid library version bounds setting. An assertion failure could occur in H5MF_settle_raw_data_fsm when a file can't be created with Parallel HDF5 due to specifying the use of a paged, @@ -289,7 +293,7 @@ Bug Fixes since HDF5-1.12.2 release (H5Pset_libver_bounds(..., H5F_LIBVER_EARLIEST, H5F_LIBVER_V18)). This has now been fixed. - - Fixed a bug in H5Ocopy that could generate invalid HDF5 files + - Fixed a bug in H5Ocopy that could generate invalid HDF5 files. H5Ocopy was missing a check to determine whether the new object's object header version is greater than version 1. Without this check, @@ -301,109 +305,100 @@ Bug Fixes since HDF5-1.12.2 release Fixes GitHub issue #2653 - - Fixed potential heap buffer overflow in decoding of link info message + - Fixed potential heap buffer overflow in decoding of link info message. Detections of buffer overflow were added for decoding version, index - flags, link creation order value, and the next three addresses. The + flags, link creation order value, and the next three addresses. The checkings will remove the potential invalid read of any of these values that could be triggered by a malformed file. Fixes GitHub issue #2603 - - Fixed potential buffer overrun issues in some object header decode routines + - Fixed potential buffer overrun issues in some object header decode routines. Several checks were added to H5O__layout_decode and H5O__sdspace_decode to ensure that memory buffers don't get overrun when decoding buffers read from - a (possibly corrupted) HDF5 file. - - - Fixed a heap buffer overflow that occurs when reading from - a dataset with a compact layout within a malformed HDF5 file - - During opening of a dataset that has a compact layout, the - library allocates a buffer that stores the dataset's raw data. - The dataset's object header that gets written to the file - contains information about how large of a buffer the library - should allocate. If this object header is malformed such that - it causes the library to allocate a buffer that is too small - to hold the dataset's raw data, future I/O to the dataset can - result in heap buffer overflows. To fix this issue, an extra - check is now performed for compact datasets to ensure that - the size of the allocated buffer matches the expected size - of the dataset's raw data (as calculated from the dataset's - dataspace and datatype information). If the two sizes do not - match, opening of the dataset will fail. + a possibly corrupted HDF5 file. + + - Fixed a heap buffer overflow that occurs when reading from a dataset with + a compact layout within a malformed HDF5 file. + + During opening of a dataset that has a compact layout, the library allocates + a buffer that stores the dataset's raw data. The dataset's object header that + gets written to the file contains information about how large of a buffer the + library should allocate. If this object header is malformed such that it causes + the library to allocate a buffer that is too small to hold the dataset's raw data, + future I/O to the dataset can result in heap buffer overflows. To fix this issue, + an extra check is now performed for compact datasets to ensure that the size of the + allocated buffer matches the expected size of the dataset's raw data (as calculated + from the dataset's dataspace and datatype information). If the two sizes do not match, + opening of the dataset will fail. Fixes GitHub issue #2606 - - Fix for CVE-2019-8396 + - Fixed an issue with malformed HDF5 files causing heap overflow. - Malformed HDF5 files may have truncated content which does not match - the expected size. When H5O__pline_decode() attempts to decode these it - may read past the end of the allocated space leading to heap overflows - as bounds checking is incomplete. + Malformed HDF5 files may have truncated content which does not match the expected size. + When H5O__pline_decode() attempts to decode these it may read past the end of the + allocated space leading to heap overflows as bounds checking is incomplete. The fix ensures each element is within bounds before reading. Fixes Jira issue HDFFV-10712, CVE-2019-8396, GitHub issue #2209 - - Memory leak + - Fixed memory leak when running h5dump with proof of vulnerability file. - Memory leak was detected when running h5dump with "pov". The memory was allocated - via H5FL__malloc() in hdf5/src/H5FL.c + The fuzzed file "pov" was an HDF5 file containing an illegal continuation + message. When deserializing the object header chunks for the file, memory + was allocated for the array of continuation messages, but this memory was + never freed when an error occurred. - The fuzzed file "pov" was an HDF5 file containing an illegal continuation message. - When deserializing the object header chunks for the file, memory is allocated for the - array of continuation messages (cont_msg_info->msgs) in continuation message info struct. - As error is encountered in loading the illegal message, the memory allocated for - cont_msg_info->msgs needs to be freed. + The allocated memory is now properly released. Fixes GitHub issue #2599 - - Fixed a memory corruption issue that can occur when reading - from a dataset using a hyperslab selection in the file - dataspace and a point selection in the memory dataspace + - Fixed a memory corruption issue that can occur when reading from a dataset + using a hyperslab selection in the file dataspace and a point selection in + the memory dataspace. - When reading from a dataset using a hyperslab selection in - the dataset's file dataspace and a point selection in the - dataset's memory dataspace where the file dataspace's "rank" - is greater than the memory dataspace's "rank", memory corruption - could occur due to an incorrect number of selection points - being copied when projecting the point selection onto the - hyperslab selection's dataspace. + When reading from a dataset using a hyperslab selection in the dataset's file + dataspace and a point selection in the dataset's memory dataspace where the file + dataspace's "rank" is greater than the memory dataspace's "rank", memory + corruption could occur due to an incorrect number of selection points being copied + when projecting the point selection onto the hyperslab selection's dataspace. - - Fix CVE-2021-37501 / GHSA-rfgw-5vq3-wrjf + Fixes CVE-2021-37501 and GHSA-rfgw-5vq3-wrjf - Check for overflow when calculating on-disk attribute data size. + - Added a check for overflow when calculating on-disk attribute data size. A bogus hdf5 file may contain dataspace messages with sizes which lead to the on-disk data sizes to exceed what is addressable. - When calculating the size, make sure, the multiplication does not - overflow. - The test case was crafted in a way that the overflow caused the - size to be 0. + When calculating the size, this update now ensures that the + multiplication does not overflow. The test case was crafted in a way + that the overflow caused the size to be 0. Fixes GitHub issue #2458 - - Seg fault on file close + - Fixed seg fault on file close. h5debug fails at file close with core dump on a file that has an - illegal file size in its cache image. In H5F_dest(), the library + illegal file size in its cache image. In H5F_dest(), the library performs all the closing operations for the file and keeps track of - the error encountered when reading the file cache image. - At the end of the routine, it frees the file's file structure and - returns error. Due to the error return, the file object is not removed - from the ID node table. This eventually causes assertion failure in + the error encountered when reading the file cache image. At the end of + the routine, it frees the file's file structure and returns an error. + Due to the error return, the file object is not removed from the ID + node table. This eventually causes assertion failure in H5VL__native_file_close() when the library finally exits and tries to access that file object in the table for closing. The closing routine, H5F_dest(), will not free the file structure if - there is error, keeping a valid file structure in the ID node table. - It will be freed later in H5VL__native_file_close() when the - library exits and terminates the file package. + there is an error, keeping a valid file structure in the ID node table. + It will be freed later in H5VL__native_file_close() when the library + exits and terminates the file package. Fixes Jira issue HDFFV-11052, CVE-2020-10812 - - Fixed an issue with variable length attributes + - Fixed an issue with variable length attributes. Previously, if a variable length attribute was held open while its file was opened through another handle, the same attribute was opened through @@ -411,12 +406,12 @@ Bug Fixes since HDF5-1.12.2 release closed, attempting to write to the attribute through the first handle would cause an error. - - Fixed an issue with hyperslab selections + - Fixed an issue with hyperslab selections. Previously, when combining hyperslab selections, it was possible for the library to produce an incorrect combined selection. - - Fixed an issue with attribute type conversion with compound datatypes + - Fixed an issue with attribute type conversion with compound datatypes. Previously, when performing type conversion for attribute I/O with a compound datatype, the library would not fill the background buffer with @@ -425,18 +420,18 @@ Bug Fixes since HDF5-1.12.2 release Fixes GitHub issue #2016 - - Modified H5Fstart_swmr_write() to preserve DAPL properties + - Modified H5Fstart_swmr_write() to preserve DAPL properties. Internally, H5Fstart_swmr_write() closes and reopens the file in question - as part of its process for making the file SWMR-safe. Previously, when + as part of its process for making the file SWMR-safe. Previously, when the library reopened the file it would simply use the default access - properties. Modified the library to instead save these properties and use - them when reopening the file. + properties. This release modifies the library to instead save these + properties and use them when reopening the file. Fixes Jira issue HDFFV-11308 - Converted an assertion on (possibly corrupt) file contents to a normal - error check + error check. Previously, the library contained an assertion check that a read superblock doesn't contain a superblock extension message when the superblock @@ -446,7 +441,7 @@ Bug Fixes since HDF5-1.12.2 release Fixes Jira issues HDFFV-11316 & HDFFV-11317 - - Memory leak + - Fixed memory leak with variable-length fill values. A memory leak was observed with variable-length fill value in H5O_fill_convert() function in H5Ofill.c. The leak is @@ -454,7 +449,7 @@ Bug Fixes since HDF5-1.12.2 release Previously, fill->buf is used for datatype conversion if it is large enough and the variable-length information - is therefore lost. A buffer is now allocated regardless + is therefore lost. A buffer is now allocated regardless so that the element in fill->buf can later be reclaimed. Fixes Jira issue HDFFV-10840 @@ -475,7 +470,7 @@ Bug Fixes since HDF5-1.12.2 release Configuration ------------- - - Fix Intel oneAPI -loopopt Fortran option being detected as a linker flag + - Fix Intel oneAPI -loopopt Fortran option being detected as a linker flag. Intel's new oneAPI Fortran compiler takes a -loopopt flag that is interpreted as a linker flag by Autoconf 2.69 and earlier. This bug @@ -486,7 +481,7 @@ Bug Fixes since HDF5-1.12.2 release to 2.71 in configure.ac. The release source code will be processed with Autoconf 2.71 or later. - - The accum test now passes on macOS 12+ (Monterey) w/ CMake + - The accum test now passes on macOS 12+ (Monterey) with CMake. Due to changes in the way macOS handles LD_LIBRARY_PATH, the accum test started failing on macOS 12+ when building with CMake. CMake has been @@ -494,7 +489,7 @@ Bug Fixes since HDF5-1.12.2 release Fixes GitHub #2994, #2261, and #1289 - - Fixed syntax of generator expressions used by CMake + - Fixed syntax of generator expressions used by CMake. Adding quotes around the generator expression should allow CMake to correctly parse the expression. Generator expressions are typically @@ -510,25 +505,26 @@ Bug Fixes since HDF5-1.12.2 release - Correct the CMake generated pkg-config file The pkg-config file generated by CMake had the order and placement of the - libraries wrong. Also added support for debug library names. + libraries wrong. This release adds support for debug library names. - Changed the order of Libs.private libraries so that dependencies come after - dependents. Did not move the compression libraries into Requires.private - because there was not a way to determine if the compression libraries had - supported pkconfig files. Still recommend that the CMake config file method - be used for building projects with CMake. + This release also changes the order of Libs.private libraries so that + dependencies come after dependents. However, the release did not move the + compression libraries into Requires.private because there was not a way to + determine if the compression libraries had supported pkconfig files. It is + still recommended that the CMake config file method be used for building + projects with CMake. Fixes GitHub issues #1546 and #2259 - - Change the settings of the *pc files to use the correct format + - Change the settings of the *pc files to use the correct format. The pkg-config files generated by CMake uses incorrect syntax for the 'Requires' settings. Changing the set to use 'lib-name = version' instead 'lib-name-version' - fixes the issue + fixes the issue. Fixes Jira issue HDFFV-11355 - - Move MPI libraries link from PRIVATE to PUBLIC + - Move MPI libraries link from PRIVATE to PUBLIC. The install dependencies were not including the need for MPI libraries when an application or library was built with the C library. Also updated the @@ -537,21 +533,25 @@ Bug Fixes since HDF5-1.12.2 release Tools ----- - - Names of objects with square brackets will have trouble without the - special argument, --no-compact-subset, on the h5dump command line. + - Added option --no-compact-subset to h5diff. + + When the name of an object contains square brackets, h5diff was not able + to parse it correctly because “[ ]” were interpreted as the compact form + of subsetting. - h5diff did not have this option and now it has been added. + h5dump has the special argument, --no-compact-subset to allow the use of + ‘[‘ and ‘]’ in dataset names. h5diff now has this option as well. Fixes GitHub issue #2682 - - In the tools traverse function - an error in either visit call - will bypass the cleanup of the local data variables. + - Replaced the H5TOOLS_GOTO_ERROR with just H5TOOLS_ERROR. - Replaced the H5TOOLS_GOTO_ERROR with just H5TOOLS_ERROR. + In the tools traverse function, an error in either visit call + will bypass the cleanup of the local data variables. Fixes GitHub issue #2598 - - Fix h5repack to only print output when verbose option is selected + - Fixed h5repack to only print output when verbose option is selected. When timing option was added to h5repack, the check for verbose was incorrectly implemented. @@ -602,42 +602,53 @@ Bug Fixes since HDF5-1.12.2 release Platforms Tested =================== - Linux 5.13.14-200.fc34 GNU gcc (GCC) 11.2.1 2021078 (Red Hat 11.2.1-1) - #1 SMP x86_64 GNU/Linux GNU Fortran (GCC) 11.2.1 2021078 (Red Hat 11.2.1-1) - Fedora34 clang version 12.0.1 (Fedora 12.0.1-1.fc34) + Linux 5.19.0-1023-aws GNU gcc, gfortran, g++ + #24-Ubuntu SMP x86_64 GNU/Linux (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 + Ubuntu 22.04 Ubuntu clang version 14.0.0-1ubuntu1 + Intel(R) oneAPI DPC++/C++ Compiler 2023.1.0 + ifort (IFORT) 2021.9.0 20230302 (cmake and autotools) - Linux 5.11.0-34-generic GNU gcc (GCC) 9.3.0-17ubuntu1 - #36-Ubuntu SMP x86_64 GNU/Linux GNU Fortran (GCC) 9.3.0-17ubuntu1 - Ubuntu 20.04 Ubuntu clang version 10.0.0-4 + Linux 5.16.14-200.fc35 GNU gcc (GCC) 11.2.1 20220127 (Red Hat 11.2.1-9) + #1 SMP x86_64 GNU/Linux GNU Fortran (GCC) 11.2.1 20220127 (Red Hat 11.2.1-9) + Fedora35 clang version 13.0.0 (Fedora 13.0.0-3.fc35) (cmake and autotools) - Linux 5.8.0-63-generic GNU gcc (GCC) 10.3.0-1ubuntu1 - #71-Ubuntu SMP x86_64 GNU/Linux GNU Fortran (GCC) 10.3.0-1ubuntu1 - Ubuntu20.10 Ubuntu clang version 11.0.0-2 - (cmake and autotools) + Linux 5.14.21-cray_shasta_c cray-mpich/8.1.23 + #1 SMP x86_64 GNU/Linux cce/15.0.0 + (frontier) gcc/12.2.0 + (cmake) - Linux 5.3.18-22-default GNU gcc (SUSE Linux) 7.5.0 - #1 SMP x86_64 GNU/Linux GNU Fortran (SUSE Linux) 7.5.0 - SUSE15sp2 clang version 7.0.1 (tags/RELEASE_701/final 349238) + Linux 5.11.0-34-generic GNU gcc (GCC) 9.4.0-1ubuntu1 + #36-Ubuntu SMP x86_64 GNU/Linux GNU Fortran (GCC) 9.4.0-1ubuntu1 + Ubuntu 20.04 Ubuntu clang version 10.0.0-4ubuntu1 + Intel(R) oneAPI DPC++/C++ Compiler 2023.1.0 + ifort (IFORT) 2021.9.0 20230302 (cmake and autotools) - Linux-4.14.0-115.21.2 spectrum-mpi/rolling-release - #1 SMP ppc64le GNU/Linux clang 8.0.1, 11.0.1 - (lassen) GCC 7.3.1 - XL 16.1.1.2 + Linux 4.14.0-115.35.1.1chaos aue/openmpi/4.1.4-arm-22.1.0.12 + #1 SMP aarch64 GNU/Linux Arm C/C++/Fortran Compiler version 22.1 + (stria) (based on LLVM 13.0.1) (cmake) - Linux-4.12.14-150.75-default cray-mpich/7.7.10 - #1 SMP x86_64 GNU/Linux GCC 7.3.0, 8.2.0 - (cori) Intel (R) Version 19.0.3.199 + Linux 4.14.0-115.35.1.3chaos spectrum-mpi/rolling-release + #1 SMP ppc64le GNU/Linux clang 12.0.1 + (vortex) GCC 8.3.1 + XL 2021.09.22 (cmake) - Linux-4.12.14-197.86-default cray-mpich/7.7.6 - # 1SMP x86_64 GNU/Linux GCC 7.3.0, 9.3.0, 10.2.0 - (mutrino) Intel (R) Version 17.0.4, 18.0.5, 19.1.3 + Linux-4.14.0-115.21.2 spectrum-mpi/rolling-release + #1 SMP ppc64le GNU/Linux clang 12.0.1, 14.0.5 + (lassen) GCC 8.3.1 + XL 16.1.1.2, 2021.09.22, 2022.08.05 (cmake) + Linux-4.12.14-197.99-default cray-mpich/7.7.14 + #1 SMP x86_64 GNU/Linux cce 12.0.3 + (theta) GCC 11.2.0 + llvm 9.0 + Intel 19.1.2 + Linux 3.10.0-1160.36.2.el7.ppc64 gcc (GCC) 4.8.5 20150623 (Red Hat 4.8.5-39) #1 SMP ppc64be GNU/Linux g++ (GCC) 4.8.5 20150623 (Red Hat 4.8.5-39) Power8 (echidna) GNU Fortran (GCC) 4.8.5 20150623 (Red Hat 4.8.5-39) @@ -645,48 +656,58 @@ Platforms Tested Linux 3.10.0-1160.24.1.el7 GNU C (gcc), Fortran (gfortran), C++ (g++) #1 SMP x86_64 GNU/Linux compilers: Centos7 Version 4.8.5 20150623 (Red Hat 4.8.5-4) - (jelly/kituo/moohan) Version 4.9.3, Version 5.3.0, Version 6.3.0, - Version 7.2.0, Version 8.3.0, Version 9.1.0 + (jelly/kituo/moohan) Version 4.9.3, Version 7.2.0, Version 8.3.0, + Version 9.1.0, Version 10.2.0 Intel(R) C (icc), C++ (icpc), Fortran (icc) compilers: Version 17.0.0.098 Build 20160721 GNU C (gcc) and C++ (g++) 4.8.5 compilers - with NAG Fortran Compiler Release 6.1(Tozai) + with NAG Fortran Compiler Release 7.1(Hanzomon) Intel(R) C (icc) and C++ (icpc) 17.0.0.098 compilers - with NAG Fortran Compiler Release 6.1(Tozai) + with NAG Fortran Compiler Release 7.1(Hanzomon) MPICH 3.1.4 compiled with GCC 4.9.3 MPICH 3.3 compiled with GCC 7.2.0 - OpenMPI 2.1.6 compiled with icc 18.0.1 - OpenMPI 3.1.3 and 4.0.0 compiled with GCC 7.2.0 + OpenMPI 3.1.3 compiled with GCC 7.2.0 and 4.1.2 + compiled with GCC 9.1.0 PGI C, Fortran, C++ for 64-bit target on x86_64; - Version 19.10-0 + Versions 18.4.0 and 19.10-0 + NVIDIA nvc, nvfortran and nvc++ version 22.5-0 + (autotools and cmake) + - Linux-3.10.0-1127.0.0.1chaos openmpi-4.0.0 + Linux-3.10.0-1160.0.0.1chaos openmpi-4.1.2 #1 SMP x86_64 GNU/Linux clang 6.0.0, 11.0.1 (quartz) GCC 7.3.0, 8.1.0 - Intel 16.0.4, 18.0.2, 19.0.4 + Intel 19.0.4, 2022.2, oneapi.2022.2 + + Linux-3.10.0-1160.90.1.1chaos openmpi/4.1 + #1 SMP x86_64 GNU/Linux GCC 7.2.0 + (skybridge) Intel/19.1 + (cmake) + + Linux-3.10.0-1160.90.1.1chaos openmpi/4.1 + #1 SMP x86_64 GNU/Linux GCC 7.2.0 + (attaway) Intel/19.1 + (cmake) + + Linux-3.10.0-1160.90.1.1chaos openmpi-intel/4.1 + #1 SMP x86_64 GNU/Linux Intel/19.1.2, 21.3.0 and 22.2.0 + (chama) (cmake) macOS Apple M1 11.6 Apple clang version 12.0.5 (clang-1205.0.22.11) Darwin 20.6.0 arm64 gfortran GNU Fortran (Homebrew GCC 11.2.0) 11.1.0 - (macmini-m1) Intel icc/icpc/ifort version 2021.3.0 20210609 + (macmini-m1) Intel icc/icpc/ifort version 2021.3.0 202106092021.3.0 20210609 macOS Big Sur 11.3.1 Apple clang version 12.0.5 (clang-1205.0.22.9) Darwin 20.4.0 x86_64 gfortran GNU Fortran (Homebrew GCC 10.2.0_3) 10.2.0 (bigsur-1) Intel icc/icpc/ifort version 2021.2.0 20210228 - macOS High Sierra 10.13.6 Apple LLVM version 10.0.0 (clang-1000.10.44.4) - 64-bit gfortran GNU Fortran (GCC) 6.3.0 - (bear) Intel icc/icpc/ifort version 19.0.4.233 20190416 - - macOS Sierra 10.12.6 Apple LLVM version 9.0.0 (clang-900.39.2) - 64-bit gfortran GNU Fortran (GCC) 7.4.0 - (kite) Intel icc/icpc/ifort version 17.0.2 - Mac OS X El Capitan 10.11.6 Apple clang version 7.3.0 from Xcode 7.3 64-bit gfortran GNU Fortran (GCC) 5.2.0 (osx1011test) Intel icc/icpc/ifort version 16.0.2 + Linux 2.6.32-573.22.1.el6 GNU C (gcc), Fortran (gfortran), C++ (g++) #1 SMP x86_64 GNU/Linux compilers: Centos6 Version 4.4.7 20120313 @@ -696,12 +717,12 @@ Platforms Tested x86_64; Version 19.10-0 - Windows 10 x64 Visual Studio 2015 w/ Intel C/C++/Fortran 18 (cmake) - Visual Studio 2017 w/ Intel C/C++/Fortran 19 (cmake) - Visual Studio 2019 w/ clang 12.0.0 + Windows 10 x64 Visual Studio 2019 w/ clang 12.0.0 + with MSVC-like command-line (C/C++ only - cmake) + Visual Studio 2019 w/ Intel C/C++ only cmake) + Visual Studio 2022 w/ clang 15.0.1 with MSVC-like command-line (C/C++ only - cmake) - Visual Studio 2019 - w/ Intel C/C++/Fortran oneAPI 2021 (cmake) + Visual Studio 2022 w/ Intel C/C++/Fortran oneAPI 2023 (cmake) Visual Studio 2019 w/ MSMPI 10.1 (C only - cmake) @@ -709,8 +730,8 @@ Known Problems ============== testflushrefresh.sh will fail when run with "make check-passthrough-vol" - on centos7, with 3 Errors/Segmentation faults. These will not occur when - run with "make check". See https://github.com/HDFGroup/hdf5/issues/673 + on centos7, with 3 Errors/Segmentation faults. These will not occur when + run with "make check". See https://github.com/HDFGroup/hdf5/issues/673 for details. The t_bigio test fails on several HPC platforms, generally by timeout with @@ -724,12 +745,12 @@ Known Problems ADB - 2019/05/07 At present, metadata cache images may not be generated by parallel - applications. Parallel applications can read files with metadata cache + applications. Parallel applications can read files with metadata cache images, but since this is a collective operation, a deadlock is possible if one or more processes do not participate. - CPP ptable test fails on both VS2017 and VS2019 with Intel compiler, JIRA - issue: HDFFV-10628. This test will pass with VS2015 with Intel compiler. + CPP ptable test fails on both VS2017 and VS2019 with Intel and Clang compilers, + JIRA issue: HDFFV-10628. This test will pass with VS2015 with Intel compiler. The subsetting option in ph5diff currently will fail and should be avoided. The subsetting option works correctly in serial h5diff.